Citrus Sinensis ID: 023708

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcHcEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccccHHHccHHHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHcccccEEEEEccccEEccccccEEEc
Coil and Loop (DISEMBL)
mearddtnklsskrltgkVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTiggryihcdvtkeEDVESAVRLAVSWKGQldimfnnagisgsggsitslnmEDVKFLLSVNLNGILHGIKHAAKAMIEGQrkgsiictsssaAIMGGLASHAYSLSKEAIIGLARSTAcelgkhgirvncisphgvpsEMLVNAYRKYLgkadmkpeeVCKMVRdsgsllrgrsASIEDVAQAALFLASEEAGFITAHNLVidggyttgtssMSFIYQ
Flexible Loop (DISEMBL)
mearddtnklsskrltgkvavitggaRGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLgkadmkpeeVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYttgtssmsfiyq
Low Complexity Region (SEG)
MEARDDTNKLSSKRLTGKvavitggargigaataKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAgisgsggsitsLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ
Disordered region (IsUnstruct)
***************TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD**SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGT********
Disordered Region (DISOPRED)
*****************KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL***********KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS*M**I**
Disordered Region (DISEMBL)
************KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ
Disordered Region (DISPRO)
*************RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	278	2.2.26 [Sep-21-2011]
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.946	0.867	0.483	2e-60
Q94K41	257	Short-chain dehydrogenase	no	no	0.899	0.972	0.440	4e-56
P50160	336	Sex determination protein	N/A	no	0.917	0.758	0.457	3e-54
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.917	0.955	0.420	4e-54
O80713	257	Short-chain dehydrogenase	no	no	0.884	0.957	0.412	5e-53
F4J300	259	Short-chain dehydrogenase	no	no	0.884	0.949	0.424	4e-52
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.870	0.812	0.432	6e-52
Q7FAE1	274	Momilactone A synthase OS	no	no	0.924	0.937	0.460	1e-51
O80714	258	Short-chain dehydrogenase	no	no	0.892	0.961	0.417	2e-49
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.917	0.894	0.386	6e-44

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/277 (48%), Positives = 186/277 (67%), Gaps = 14/277 (5%)

Query: 5   DDTNK-LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG 63
           ++TN  L  KRL GKVA+ITGGA GIG AT  LFA +GA +VIAD+ +  G++LA ++  
Sbjct: 21  EETNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSS 80

Query: 64  R-------YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG---SITSLNMED 113
                   +I CDV+ E DVE+ V + V+  G+LDI+FNNAG+ G      SI   + ++
Sbjct: 81  HKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADE 140

Query: 114 VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
              ++ VN+ G+  G+KH A+AMI+   KG II T+S A +MGG+  HAY+ SK AI+GL
Sbjct: 141 FDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGL 200

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG--KADMKPEEVCKMVRDSGSLLR 231
            ++ ACELGK+GIRVNCISP GV + MLVNA+RK  G    D   EE+ + VR S + L+
Sbjct: 201 TKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVR-SLANLK 259

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
           G +    D+A+AAL+LAS+E+ ++  HNLV+DGG TT
Sbjct: 260 GETLRANDIAEAALYLASDESKYVNGHNLVVDGGVTT 296

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  218 bits (555), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 170/261 (65%), Gaps = 11/261 (4%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
           +S KRL GK+ +ITGGA GIGA + +LF E+GA +VI D+ DELG  +A +IG     Y 
Sbjct: 1   MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
           HCDVT E +VE+AV+  V   G+LD++F+NAG+     SI  LN+ ++   +++NL G  
Sbjct: 61  HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTA 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             IKHAA+AM+E   +GSI+CT+S AA + G A H Y+ SK  ++GL +S +  LGK+GI
Sbjct: 121 AFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGI 180

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P GV + ++ N ++       M+P  V +    S + L+G       VA+AALF
Sbjct: 181 RVNGVAPFGVATPLVCNGFK-------MEPNVVEQNTSASAN-LKGIVLKARHVAEAALF 232

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS+E+ +++  NL +DGGY+
Sbjct: 233 LASDESAYVSGQNLAVDGGYS 253

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  211 bits (538), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 181/282 (64%), Gaps = 27/282 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
            KRL GKVA++TGGARGIG A  +LFA++GA +VIADI D  G ALAS +G +  ++ CD
Sbjct: 50  PKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCD 109

Query: 70  VTKEEDVESAVRLAVSWKG-QLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNLNG 124
           V+ E+DV  AV  A+S  G +LD+  NNAG+ G    +  SI S +  +   +L VN  G
Sbjct: 110 VSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALG 169

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
              G+KHAA+AM   +R GSI+  +S AA++GGL  HAY+ SK AI+GL ++ ACEL  H
Sbjct: 170 AALGMKHAARAMAP-RRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAH 228

Query: 185 GIRVNCISPHGVPSEMLVNAYRK------------------YLGKADMKPEEVCKMVRDS 226
           G+RVNC+SP GV + ML+NA+R+                      +D + E++ ++VR  
Sbjct: 229 GVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGL 288

Query: 227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
            + L+G +    D+A+A LFLAS+EA +I+ HNLV+DGG TT
Sbjct: 289 AT-LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 329

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  211 bits (538), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/269 (42%), Positives = 170/269 (63%), Gaps = 14/269 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR----YIHCD 69
           RL GKVA++TGGA GIG + A+LF E+GA I I D+ DELG  ++  +GG     Y HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG-SITSLNMEDVKFLLSVNLNGILHG 128
           VT E+DV  AV       G +DIM NNAGI+G     I   +  + K +  +N+NG+  G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           +KHAA+ MI  + KGSI+  +S ++++ G   H Y+ +K A++GL +S A ELG+HGIRV
Sbjct: 122 MKHAARIMIP-KMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRV 180

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEV---CKMVRDSGSLLRGRSASIEDVAQAAL 245
           NC+SP+ VP+ + +     YL +++M+ + +      VR S + L+G      DVA+A L
Sbjct: 181 NCVSPYAVPTRLSM----PYLPESEMQEDALRGFLTFVR-SNANLKGVDLMPNDVAEAVL 235

Query: 246 FLASEEAGFITAHNLVIDGGYTTGTSSMS 274
           +LA+EE+ +++  NLVIDGG++    ++ 
Sbjct: 236 YLATEESKYVSGLNLVIDGGFSIANHTLQ 264

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  207 bits (528), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/264 (41%), Positives = 167/264 (63%), Gaps = 18/264 (6%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
           +S  RL GK+A+ITGGA GIGA   +LF ++GA +VI D  +ELG  +A ++G     + 
Sbjct: 1   MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            CDVT E++VE+AV+  V   G+LD++F+NAG+    GS   LN+E     ++VN+ G  
Sbjct: 61  RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAA 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             IKHAA+AM+E   +GSI+CT+S A+ +GG   HAY+ SK A++GL +S    LGK+GI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---LLRGRSASIEDVAQA 243
           RVN ++P+ V + +            + + EE  +MV +  +   +L+G       VA+A
Sbjct: 181 RVNGVAPYAVATAI------------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEA 228

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           ALFLAS+++ +++  NL +DGGY+
Sbjct: 229 ALFLASDDSAYVSGQNLAVDGGYS 252

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/264 (42%), Positives = 168/264 (63%), Gaps = 18/264 (6%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
           +S +RL GK+ +ITGGA GIGA  A+LF ++GA +VI D+ +ELG  +A +IG     + 
Sbjct: 1   MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            CD+T E +VE+AV+  V   G+LD++F+NAG+    GSI  L++E     ++VN+ G  
Sbjct: 61  RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAA 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             IKHAA++M+    +GSI+CT+S  A +GG   H+Y+ SK A++GL RS    LGK+GI
Sbjct: 121 AFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGI 180

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVAQA 243
           RVN ++P+GV + +   +Y           EE  KMV D   + ++L+G       VA A
Sbjct: 181 RVNGVAPYGVATGL--TSYN----------EETVKMVEDYCSATAILKGVVLKARHVADA 228

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           ALFLAS+++ +I+  NL +DGGY+
Sbjct: 229 ALFLASDDSVYISGQNLGVDGGYS 252

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  204 bits (519), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 112/259 (43%), Positives = 167/259 (64%), Gaps = 17/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYIHCDVT 71
           L GK+A+ITGGA GIGA   +LF ++GA +VI DI +ELG  LA +IG     +  C+VT
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            E DVE+AV+  V   G+LD++F+NAG+  + GS+  L++E     ++VN+ G    IKH
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           AA++M+    +GSI+CT+S AA +GG   H+Y+ SK A++GL RS    LG++GIRVN +
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL---LRGRSASIEDVAQAALFLA 248
           +P+GV + M  +AY           EE  KM+ + G     L+G       +A+AALFLA
Sbjct: 224 APYGVATGM-TSAYN----------EEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLA 272

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S+++ +I+  NLV+DGG++
Sbjct: 273 SDDSVYISGQNLVVDGGFS 291

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  203 bits (516), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/269 (46%), Positives = 176/269 (65%), Gaps = 12/269 (4%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYIHC 68
           +++L GKVAVITGGA GIGA TA+LF ++GA +V+ADI DELGA+L + +G     Y+HC
Sbjct: 12  ARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHC 71

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG-SITSLNMEDVKFLLSVNLNGILH 127
           DVT E DV +AV  AV+  G+LD+MFNNAG+SG     ++    ED + +L+VNL G   
Sbjct: 72  DVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFL 131

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G KHAA+ M    R+GSII T+S ++ + G ASHAY+ SK A++G   + A ELG+HGIR
Sbjct: 132 GTKHAARVMAP-ARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIR 190

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VNC+SP GV + +     R  +G   M  E +  ++ +S +L    +   +D+A AALFL
Sbjct: 191 VNCVSPAGVATPLA----RAAMG---MDDEAIEAIMANSANLKGAGALKADDIAAAALFL 243

Query: 248 ASEEAGFITAHNLVIDGGYTTGTSSMSFI 276
           AS++  +++  NL +DGG +   SS  F 
Sbjct: 244 ASDDGRYVSGQNLRVDGGLSVVNSSFGFF 272

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  196 bits (497), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/261 (41%), Positives = 163/261 (62%), Gaps = 13/261 (4%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
           +S  RL GK+ +ITGGA GIGA  A+LF ++GA +VI D+ +ELG  +A  IG     + 
Sbjct: 1   MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            CDVT E +VE AV+  V   G+LD++F+NAG+     S    ++E    +++VN+ G  
Sbjct: 61  RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAA 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             IKHAA+AM+E   +GSI+CT+S +A +GG   H Y+ SK  ++GL RS   +LGK+GI
Sbjct: 121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGI 179

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P+ V + M   ++ +  GK   + E+      D+  +L+G       VAQ ALF
Sbjct: 180 RVNGVAPYAVATPM--TSHDEVTGK---QLEDYF----DAKGILKGMVLKASHVAQVALF 230

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS+++ +I+  NL +DGGYT
Sbjct: 231 LASDDSAYISGQNLAVDGGYT 251

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  177 bits (450), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/272 (38%), Positives = 167/272 (61%), Gaps = 17/272 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRY 65
           +RL GKVA+ITGGA GIG +  +LF ++GA + I D+ D+LG  +  ++          +
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNG 124
           IH DV  E+D+ +AV  AV   G LDI+ NNAG+ G+    I + ++ + +    VN+ G
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
               +KHAA+ MI  ++KGSI+   S   ++GG+  H+Y  SK A++GL RS A ELG+H
Sbjct: 136 AFLSMKHAARVMIP-EKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQH 194

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVA 241
           GIRVNC+SP+ V +++ +     +L + + + E+     R+   + + L+G   +++DVA
Sbjct: 195 GIRVNCVSPYAVATKLAL----AHLPEEE-RTEDAFVGFRNFAAANANLKGVELTVDDVA 249

Query: 242 QAALFLASEEAGFITAHNLVIDGGYTTGTSSM 273
            A LFLAS+++ +I+  NL+IDGG+T    S 
Sbjct: 250 NAVLFLASDDSRYISGDNLMIDGGFTCTNHSF 281

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
255561755	282	short chain alcohol dehydrogenase, putat	0.985	0.971	0.751	1e-118
147777220	285	hypothetical protein VITISV_025196 [Viti	0.985	0.961	0.740	1e-116
224101965	264	predicted protein [Populus trichocarpa]	0.949	1.0	0.780	1e-116
359473170	482	PREDICTED: sex determination protein tas	0.985	0.568	0.737	1e-115
357474411	298	Sex determination protein [Medicago trun	0.978	0.912	0.634	1e-99
1293690	281	STA1-12 [Silene latifolia subsp. alba]	0.946	0.935	0.633	4e-97
297815418	272	alcohol dehydrogenase [Arabidopsis lyrat	0.964	0.985	0.650	2e-95
21554236	272	alcohol dehydrogenase (ATA1) [Arabidopsi	0.964	0.985	0.646	2e-91
15229190	272	protein TAPETUM 1 [Arabidopsis thaliana]	0.964	0.985	0.646	3e-91
2501781	272	alcohol dehydrogenase [Arabidopsis thali	0.964	0.985	0.643	6e-91

>gi|255561755|ref|XP_002521887.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223538925|gb|EEF40523.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/274 (75%), Positives = 240/274 (87%)

Query: 5   DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR 64
           ++  +LS+KRL GKVAV+TGGARGIGAATAK FAENGA++V+ADILD+LG  LA +IGGR
Sbjct: 9   ENVQRLSTKRLRGKVAVVTGGARGIGAATAKRFAENGANVVVADILDDLGHPLADSIGGR 68

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           YIHCDV  E DVESA+ LA++WKG+LDIMFNNAGI+G  GSIT+L+ME VK+L SVN+NG
Sbjct: 69  YIHCDVANEADVESAINLALAWKGKLDIMFNNAGIAGPDGSITNLDMEQVKYLFSVNVNG 128

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            LHGIKHAAKAMI+GQ  G IIC+SSSAAIMGGL SH Y+ SKEAI+GL +STACELG H
Sbjct: 129 TLHGIKHAAKAMIKGQNGGCIICSSSSAAIMGGLGSHPYTSSKEAIVGLMKSTACELGVH 188

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVNCISPHGVPSEMLV AYR+ LGKADM  EEV K+V + GSLLRGR A++EDVAQAA
Sbjct: 189 GIRVNCISPHGVPSEMLVGAYRRILGKADMNSEEVSKIVGERGSLLRGRCATVEDVAQAA 248

Query: 245 LFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           LFLASEE+GFITAHNLVIDGGYT+  ++M+FIYQ
Sbjct: 249 LFLASEESGFITAHNLVIDGGYTSANNNMNFIYQ 282

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777220|emb|CAN63288.1| hypothetical protein VITISV_025196 [Vitis vinifera]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/274 (74%), Positives = 239/274 (87%)

Query: 5   DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR 64
           +D  KLS KRL GKVA+ITGGARGIGAATAKLFA +GAH++IAD+LD LG  LA +IGGR
Sbjct: 9   NDQQKLSEKRLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGR 68

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           YIHCDV KE+D+ESAV+LA++WKGQLDIMFNNAGI G  GS+T+++M  +K LL+VN+NG
Sbjct: 69  YIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNG 128

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            +HGIKHAA+AMI G++ G IICTSSSAAIMGGLASH Y+LSKEAI+GL RSTACELG H
Sbjct: 129 NIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTLSKEAIVGLMRSTACELGVH 188

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVNCISPHGVP+EMLV+ YRK LGKAD+ PEEV ++V   GSLLRGR  S+ED+AQAA
Sbjct: 189 GIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAA 248

Query: 245 LFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           LFLASE+AGFITAHNLV+DGG+T+  S MSFIYQ
Sbjct: 249 LFLASEDAGFITAHNLVLDGGFTSACSDMSFIYQ 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101965|ref|XP_002312493.1| predicted protein [Populus trichocarpa] gi|222852313|gb|EEE89860.1| predicted protein [Populus trichocarpa]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/264 (78%), Positives = 234/264 (88%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
           RL GKVAVITGGARGIGAATAK+FAENGA ++IADILD+LG +LA +IGGRYIHCDV  E
Sbjct: 1   RLMGKVAVITGGARGIGAATAKVFAENGASVIIADILDDLGTSLADSIGGRYIHCDVVNE 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
            DVESA+ LA++WKG+LDIMFNNAGISG+ GSIT+L+ME V +LLSVN+NGILHGIKHAA
Sbjct: 61  ADVESAINLALAWKGKLDIMFNNAGISGTEGSITNLDMEQVNYLLSVNVNGILHGIKHAA 120

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + MI+GQ+ G IIC SSSAAIMGGL SH YSLSKEAIIGL RSTACELG HGIRVNCISP
Sbjct: 121 RVMIKGQKGGCIICMSSSAAIMGGLGSHPYSLSKEAIIGLMRSTACELGVHGIRVNCISP 180

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
           HGV SEMLV AYRK LGK DM PEEV K+V + GSLL+GRS S+EDVAQA +FLASEEAG
Sbjct: 181 HGVASEMLVGAYRKVLGKKDMTPEEVSKIVGERGSLLKGRSPSLEDVAQAVMFLASEEAG 240

Query: 254 FITAHNLVIDGGYTTGTSSMSFIY 277
           +ITAHNLVIDGG+T+ +S+MSFIY
Sbjct: 241 YITAHNLVIDGGFTSASSNMSFIY 264

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473170|ref|XP_002281910.2| PREDICTED: sex determination protein tasselseed-2-like [Vitis vinifera]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/274 (73%), Positives = 237/274 (86%)

Query: 5   DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR 64
           DD   LS  RL GKVA+ITGGARGIGAATAKLFA +GAH++IAD+LD LG  LA +IGGR
Sbjct: 206 DDLIWLSCVRLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGR 265

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           YIHCDV KE+D+ESAV+LA++WKGQLDIMFNNAGI G  GS+T+++M  +K LL+VN+NG
Sbjct: 266 YIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNG 325

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            +HGIKHAA+AMI G++ G IICTSSSAAIMGGLASH Y+LSKEAI+GL RSTACELG H
Sbjct: 326 NIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTLSKEAIVGLMRSTACELGVH 385

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVNCISPHGVP+EMLV+ YRK LGKAD+ PEEV ++V   GSLLRGR  S+ED+AQAA
Sbjct: 386 GIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAA 445

Query: 245 LFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           LFLASE+AGFITAHNLV+DGG+T+  S MSFIYQ
Sbjct: 446 LFLASEDAGFITAHNLVLDGGFTSACSDMSFIYQ 479

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474411|ref|XP_003607490.1| Sex determination protein [Medicago truncatula] gi|355508545|gb|AES89687.1| Sex determination protein [Medicago truncatula]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 182/287 (63%), Positives = 225/287 (78%), Gaps = 15/287 (5%)

Query: 6   DTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY 65
           ++  L+ KRL GKVAVITGGARGIGAATAKLFAENGAH++IAD+LDE G  +A +I G Y
Sbjct: 10  ESQNLAPKRLLGKVAVITGGARGIGAATAKLFAENGAHVIIADVLDEEGTKVAESIDGLY 69

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI--------------SGSGGSITSLNM 111
           IHCDV+KE D+ESA+ L++SWKGQLDIMFNNAGI                 G SIT+L+M
Sbjct: 70  IHCDVSKESDIESAINLSISWKGQLDIMFNNAGIVHRIIGLVLTPVIAGYEGRSITTLDM 129

Query: 112 EDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII 171
           E +  LLS+NL G +HGIKHAAKAMI+G++ GSIICTSS+AA +GG ASH Y++SK A+ 
Sbjct: 130 EKLTHLLSINLFGTIHGIKHAAKAMIKGKKGGSIICTSSAAATIGGFASHGYTMSKSAMD 189

Query: 172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR 231
           GL RS ACELG H IRVNC+SPHGVPSEML+NA+R Y G+ DM  E++ + +  + SLL+
Sbjct: 190 GLMRSAACELGVHLIRVNCVSPHGVPSEMLLNAFRCY-GEVDMTSEQLSEFIGMNASLLK 248

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           GR A+ +DVAQAALFLAS+E+GF+TAHNL +DGG T+  S MSFIYQ
Sbjct: 249 GRGATTDDVAQAALFLASDESGFVTAHNLSVDGGITSANSVMSFIYQ 295

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1293690|gb|AAB42054.1| STA1-12 [Silene latifolia subsp. alba]

 Score =  360 bits (924), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 168/265 (63%), Positives = 221/265 (83%), Gaps = 2/265 (0%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
           RL GKVA++TGGARGIGAA AKLFA NGAH+V+AD+LDELG  LA++IGG ++HC+V+KE
Sbjct: 18  RLKGKVAIVTGGARGIGAAIAKLFASNGAHVVVADVLDELGVGLANSIGGCFVHCNVSKE 77

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
            D+E+ V+LA++WKG+LDI+ NNAG SG+ GSI ++NM+ V+ ++ VNL G++HGIKHAA
Sbjct: 78  ADLENTVKLAMAWKGRLDIIVNNAGTSGADGSIVNVNMDRVREIVGVNLFGVVHGIKHAA 137

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           +AMIEG+R GSIICTSSSAAIMGGLASHAY++SK AI+ + +S ACELG+HGIRVNCISP
Sbjct: 138 RAMIEGKRGGSIICTSSSAAIMGGLASHAYTMSKGAILSVMKSAACELGEHGIRVNCISP 197

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
           H VP+EML++ YR+++G  D+  EE+ KM     SLL G+  S+ED+A  ALFLAS++AG
Sbjct: 198 HAVPTEMLISGYRRFVG--DIGDEEIAKMCAAKASLLHGKGGSVEDIAAGALFLASDDAG 255

Query: 254 FITAHNLVIDGGYTTGTSSMSFIYQ 278
           FIT HNLV+DGGYT    +M+ +Y+
Sbjct: 256 FITGHNLVVDGGYTAANITMAHMYR 280

Source: Silene latifolia subsp. alba

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297815418|ref|XP_002875592.1| alcohol dehydrogenase [Arabidopsis lyrata subsp. lyrata] gi|297321430|gb|EFH51851.1| alcohol dehydrogenase [Arabidopsis lyrata subsp. lyrata]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/269 (65%), Positives = 220/269 (81%), Gaps = 1/269 (0%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
           S+KRL  KVA+ITGGARGIGAATA+LF ENGA++++ADIL+  G  +A +IGG Y+HCDV
Sbjct: 4   SNKRLFQKVAIITGGARGIGAATARLFTENGAYVIVADILENEGIHVAESIGGCYVHCDV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +KE DVE+AV LA+  KG+LD+MFNNAG++ + GSI  ++++ V  L+SVN+NG+LHGIK
Sbjct: 64  SKEADVEAAVELAMRRKGRLDVMFNNAGMTLNEGSIMEMDVDMVNKLVSVNVNGVLHGIK 123

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           HAAKAMI+G   GSIICTSSS+ +MGGL  HAY+LSK AI GL R+TACELG HGIRVN 
Sbjct: 124 HAAKAMIKGGGGGSIICTSSSSGVMGGLGGHAYTLSKGAINGLVRTTACELGSHGIRVNS 183

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISPHGVP+++LVNAYRKYL    +   EV  +V + GSLL GR+ ++EDVAQAALFLAS+
Sbjct: 184 ISPHGVPTDILVNAYRKYLNNDKLDVAEVTDIVAEKGSLLTGRAGTVEDVAQAALFLASQ 243

Query: 251 E-AGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           E +GFIT HNLV+DGGYT+ TS+M FIY 
Sbjct: 244 ESSGFITGHNLVVDGGYTSATSTMRFIYN 272

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554236|gb|AAM63311.1| alcohol dehydrogenase (ATA1) [Arabidopsis thaliana]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/269 (64%), Positives = 220/269 (81%), Gaps = 1/269 (0%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
           S KRL  KVA+ITGGARGIGAATA+LF ENGA++++ADIL+  G  +A +IGG Y+HCDV
Sbjct: 4   SDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIGGCYVHCDV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +KE DVE+AV LA+  KG+LD+MFNNAG+S + GSI  ++++ V  L+SVN+NG+LHGIK
Sbjct: 64  SKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIK 123

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           HAAKAMI+G R GSIICTSSS+ +MGGL  HAY+LSK AI G+ R+TACELG HGIRVN 
Sbjct: 124 HAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRTTACELGSHGIRVNS 183

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISPHGVP+++LVNAYRK+L    +   EV  ++ + GSLL GR+ ++EDVAQAALFLAS+
Sbjct: 184 ISPHGVPTDILVNAYRKFLNNDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQ 243

Query: 251 E-AGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           E +GFIT HNLV+DGGYT+ TS+M FIY 
Sbjct: 244 ESSGFITGHNLVVDGGYTSATSTMRFIYN 272

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229190|ref|NP_189882.1| protein TAPETUM 1 [Arabidopsis thaliana] gi|7529267|emb|CAB86683.1| alcohol dehydrogenase (ATA1) [Arabidopsis thaliana] gi|117168153|gb|ABK32159.1| At3g42960 [Arabidopsis thaliana] gi|332644240|gb|AEE77761.1| protein TAPETUM 1 [Arabidopsis thaliana]

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 174/269 (64%), Positives = 220/269 (81%), Gaps = 1/269 (0%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
           S KRL  KVA+ITGGARGIGAATA+LF ENGA++++ADIL+  G  +A +IGG Y+HCDV
Sbjct: 4   SDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIGGCYVHCDV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +KE DVE+AV LA+  KG+LD+MFNNAG+S + GSI  ++++ V  L+SVN+NG+LHGIK
Sbjct: 64  SKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIK 123

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           HAAKAMI+G R GSIICTSSS+ +MGGL  HAY+LSK AI G+ R+TACELG HGIRVN 
Sbjct: 124 HAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRTTACELGSHGIRVNS 183

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISPHGVP+++LVNAYRK+L    +   EV  ++ + GSLL GR+ ++EDVAQAALFLAS+
Sbjct: 184 ISPHGVPTDILVNAYRKFLNHDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQ 243

Query: 251 E-AGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           E +GFIT HNLV+DGGYT+ TS+M FIY 
Sbjct: 244 ESSGFITGHNLVVDGGYTSATSTMRFIYN 272

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2501781|gb|AAC49835.1| alcohol dehydrogenase [Arabidopsis thaliana]

 Score =  339 bits (870), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 173/269 (64%), Positives = 218/269 (81%), Gaps = 1/269 (0%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
           S KRL  KVA+ITGGARGIGAATA+LF ENGA++++ADILD  G  +A +IGG Y+HCDV
Sbjct: 4   SDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILDNEGILVAESIGGCYVHCDV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +KE DVE+AV LA+  KG+LD+MFNNAG+S + GSI  ++++ V  L+SVN+NG+LHGIK
Sbjct: 64  SKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIK 123

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           HAAKAMI+G R GSIICTSSS+ +MGGL  HAY+LSK  I G+ R+T CELG HGIRVN 
Sbjct: 124 HAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGGINGVVRTTECELGSHGIRVNS 183

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISPHGVP+++LVNAYRK+L    +   EV  ++ + GSLL GR+ ++EDVAQAALFLAS+
Sbjct: 184 ISPHGVPTDILVNAYRKFLNNDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQ 243

Query: 251 E-AGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           E +GFIT HNLV+DGGYT+ TS+M FIY 
Sbjct: 244 ESSGFITGHNLVVDGGYTSATSTMRFIYN 272

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
TAIR|locus:2078541	272	ATA1 "TAPETUM 1" [Arabidopsis	0.960	0.981	0.574	1.4e-78
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.946	0.867	0.422	3.6e-50
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.917	0.85	0.390	5.4e-47
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.899	0.972	0.394	2.7e-45
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.910	0.737	0.396	1.5e-44
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.910	0.826	0.383	2.8e-43
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.884	0.957	0.367	4.6e-41
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.870	0.812	0.382	9.6e-41
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.892	0.961	0.371	2e-40
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.884	0.949	0.371	2.6e-40

TAIR|locus:2078541 ATA1 "TAPETUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 154/268 (57%), Positives = 197/268 (73%)

Query:    11 SSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
             S KRL  K                +LF ENGA++++ADIL+  G  +A +IGG Y+HCDV
Sbjct:     4 SDKRLFEKVAIITGGARGIGAATARLFTENGAYVIVADILENEGILVAESIGGCYVHCDV 63

Query:    71 TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
             +KE DVE+AV LA+  KG+LD+MFNNA           ++++ V  L+SVN+NG+LHGIK
Sbjct:    64 SKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIK 123

Query:   131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
             HAAKAMI+G R GSIICTSSS+ +MGGL  HAY+LSK AI G+ R+TACELG HGIRVN 
Sbjct:   124 HAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRTTACELGSHGIRVNS 183

Query:   191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
             ISPHGVP+++LVNAYRK+L    +   EV  ++ + GSLL GR+ ++EDVAQAALFLAS+
Sbjct:   184 ISPHGVPTDILVNAYRKFLNHDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQ 243

Query:   251 EA-GFITAHNLVIDGGYTTGTSSMSFIY 277
             E+ GFIT HNLV+DGGYT+ TS+M FIY
Sbjct:   244 ESSGFITGHNLVVDGGYTSATSTMRFIY 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010584 "pollen exine formation" evidence=RCA

GO:0009908 "flower development" evidence=ISS

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 117/277 (42%), Positives = 170/277 (61%)

Query:     5 DDTNK-LSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGG 63
             ++TN  L  KRL GK                 LFA +GA +VIAD+ +  G++LA ++  
Sbjct:    21 EETNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSS 80

Query:    64 R-------YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXL---NMED 113
                     +I CDV+ E DVE+ V + V+  G+LDI+FNNA           +   + ++
Sbjct:    81 HKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADE 140

Query:   114 VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
                ++ VN+ G+  G+KH A+AMI+   KG II T+S A +MGG+  HAY+ SK AI+GL
Sbjct:   141 FDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGL 200

Query:   174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL--LR 231
              ++ ACELGK+GIRVNCISP GV + MLVNA+RK  G  D++ ++V +M     SL  L+
Sbjct:   201 TKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSG-GDVEDDDVEEMEEFVRSLANLK 259

Query:   232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
             G +    D+A+AAL+LAS+E+ ++  HNLV+DGG TT
Sbjct:   260 GETLRANDIAEAALYLASDESKYVNGHNLVVDGGVTT 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 102/261 (39%), Positives = 156/261 (59%)

Query:    11 SSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGG--RYIHC 68
             SS++L GK                + F   GA ++I DI +E G  +A+ +G    ++ C
Sbjct:    32 SSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRC 91

Query:    69 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXX--XXXXLNMEDVKFLLSVNLNGIL 126
             DVT+EE +  AV  AV+  G+LD+M N+A             L+M+    ++ +N+ G +
Sbjct:    92 DVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTV 151

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              GIKHAA+AMI     GSI+C SS + +MGGL  HAYS+SK  I G+ ++ A EL KHG+
Sbjct:   152 LGIKHAARAMIPAG-SGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHGL 210

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             R+NCISP G+P+ + +  +R+      ++ E++  +V  +G L +G      DVA+AAL+
Sbjct:   211 RINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGEL-KGEKCEEIDVAKAALY 269

Query:   247 LASEEAGFITAHNLVIDGGYT 267
             LAS++A F+T HNLV+DGG+T
Sbjct:   270 LASDDAKFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 103/261 (39%), Positives = 154/261 (59%)

Query:    10 LSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
             +S KRL GK                +LF E+GA +VI D+ DELG  +A +IG     Y 
Sbjct:     1 MSGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY 60

Query:    67 HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
             HCDVT E +VE+AV+  V   G+LD++F+NA           LN+ ++   +++NL G  
Sbjct:    61 HCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTA 120

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
               IKHAA+AM+E   +GSI+CT+S AA + G A H Y+ SK  ++GL +S +  LGK+GI
Sbjct:   121 AFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGI 180

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             RVN ++P GV + ++ N ++       M+P  V +    S +L +G       VA+AALF
Sbjct:   181 RVNGVAPFGVATPLVCNGFK-------MEPNVVEQNTSASANL-KGIVLKARHVAEAALF 232

Query:   247 LASEEAGFITAHNLVIDGGYT 267
             LAS+E+ +++  NL +DGGY+
Sbjct:   233 LASDESAYVSGQNLAVDGGYS 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 104/262 (39%), Positives = 153/262 (58%)

Query:    11 SSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGR--YIHC 68
             +S++L GK                  F  +GA ++IADI  ++G      +G    Y  C
Sbjct:    74 TSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFPC 133

Query:    69 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXX-XXXXLNMEDVKFLLSVNLNGILH 127
             DVTKE D+ +AV  AVS   +LDIM+NNA            L++     +++ N+ G++ 
Sbjct:   134 DVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVRGVMA 193

Query:   128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             GIKHAA+ MI  +  GSIIC  S   +MGGLA H YS+SK A+IG+ RSTA EL KH IR
Sbjct:   194 GIKHAARVMIP-RNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIR 252

Query:   188 VNCISPHGVPSEMLVNAYRK-YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             VNCISP  + +  +++  R+ Y G  D +   + ++V+ +G +L G      DVA AA++
Sbjct:   253 VNCISPFAITTSFVMDEMRQIYPGVDDSR---LIQIVQSTG-VLNGEVCEPTDVANAAVY 308

Query:   247 LASEEAGFITAHNLVIDGGYTT 268
             LAS+++ ++  HNLV+DGG+TT
Sbjct:   309 LASDDSKYVNGHNLVVDGGFTT 330

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 100/261 (38%), Positives = 149/261 (57%)

Query:    11 SSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGR--YIHC 68
             +SK+L GK                  F  +GA +VIAD+  E G   A  +G    ++ C
Sbjct:    37 TSKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRC 96

Query:    69 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXX--XXXXXXXLNMEDVKFLLSVNLNGIL 126
             DVT E D+  AV + V   G+LD+M+NNA             L+M + + ++ +N+ G++
Sbjct:    97 DVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVV 156

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              GIKHAAK MI   R G I+CTSS A + GGLA H+Y++SK    G+ +S A EL +HG+
Sbjct:   157 SGIKHAAKFMIPA-RSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGV 215

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             R+NCISP  V + + ++  +K   K  +  E++ + V+  G L +G      DVA+AAL+
Sbjct:   216 RINCISPGTVATPLTLSYLQKVFPK--VSEEKLRETVKGMGEL-KGAECEEADVAKAALY 272

Query:   247 LASEEAGFITAHNLVIDGGYT 267
             LAS +  ++T HNLV+DGG T
Sbjct:   273 LASNDGKYVTGHNLVVDGGMT 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 97/264 (36%), Positives = 152/264 (57%)

Query:    10 LSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
             +S  RL GK                +LF ++GA +VI D  +ELG  +A ++G     + 
Sbjct:     1 MSGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY 60

Query:    67 HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
              CDVT E++VE+AV+  V   G+LD++F+NA           LN+E     ++VN+ G  
Sbjct:    61 RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAA 120

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
               IKHAA+AM+E   +GSI+CT+S A+ +GG   HAY+ SK A++GL +S    LGK+GI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGI 180

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---LLRGRSASIEDVAQA 243
             RVN ++P+ V +   +N+          + EE  +MV +  +   +L+G       VA+A
Sbjct:   181 RVNGVAPYAVATA--INS----------RDEETVRMVEEYSAATGILKGVVLKARHVAEA 228

Query:   244 ALFLASEEAGFITAHNLVIDGGYT 267
             ALFLAS+++ +++  NL +DGGY+
Sbjct:   229 ALFLASDDSAYVSGQNLAVDGGYS 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 99/259 (38%), Positives = 149/259 (57%)

Query:    15 LTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG---GRYIHCDVT 71
             L GK                +LF ++GA +VI DI +ELG  LA +IG     +  C+VT
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    72 KEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKH 131
              E DVE+AV+  V   G+LD++F+NA           L++E     ++VN+ G    IKH
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query:   132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
             AA++M+    +GSI+CT+S AA +GG   H+Y+ SK A++GL RS    LG++GIRVN +
Sbjct:   164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query:   192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL---RGRSASIEDVAQAALFLA 248
             +P+GV + M  +AY           EE  KM+ + G  L   +G       +A+AALFLA
Sbjct:   224 APYGVATGM-TSAYN----------EEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLA 272

Query:   249 SEEAGFITAHNLVIDGGYT 267
             S+++ +I+  NLV+DGG++
Sbjct:   273 SDDSVYISGQNLVVDGGFS 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 97/261 (37%), Positives = 148/261 (56%)

Query:    10 LSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
             +S  RL GK                +LF ++GA +VI D+ +ELG  +A  IG     + 
Sbjct:     1 MSGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY 60

Query:    67 HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
              CDVT E +VE AV+  V   G+LD++F+NA            ++E    +++VN+ G  
Sbjct:    61 RCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAA 120

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
               IKHAA+AM+E   +GSI+CT+S +A +GG   H Y+ SK  ++GL RS   +LGK+GI
Sbjct:   121 AFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGI 179

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             RVN ++P+ V + M   ++ +  GK   + E+      D+  +L+G       VAQ ALF
Sbjct:   180 RVNGVAPYAVATPM--TSHDEVTGK---QLEDYF----DAKGILKGMVLKASHVAQVALF 230

Query:   247 LASEEAGFITAHNLVIDGGYT 267
             LAS+++ +I+  NL +DGGYT
Sbjct:   231 LASDDSAYISGQNLAVDGGYT 251

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 98/264 (37%), Positives = 151/264 (57%)

Query:    10 LSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG---GRYI 66
             +S +RL GK                +LF ++GA +VI D+ +ELG  +A +IG     + 
Sbjct:     1 MSGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY 60

Query:    67 HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
              CD+T E +VE+AV+  V   G+LD++F+NA           L++E     ++VN+ G  
Sbjct:    61 RCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAA 120

Query:   127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
               IKHAA++M+    +GSI+CT+S  A +GG   H+Y+ SK A++GL RS    LGK+GI
Sbjct:   121 AFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGI 180

Query:   187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVAQA 243
             RVN ++P+GV + +   +Y           EE  KMV D   + ++L+G       VA A
Sbjct:   181 RVNGVAPYGVATGL--TSYN----------EETVKMVEDYCSATAILKGVVLKARHVADA 228

Query:   244 ALFLASEEAGFITAHNLVIDGGYT 267
             ALFLAS+++ +I+  NL +DGGY+
Sbjct:   229 ALFLASDDSVYISGQNLGVDGGYS 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3T046	BDH2_BOVIN	1, ., 1, ., 1, ., 3, 0	0.3538	0.8489	0.9632	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3255	0.8561	0.9596	yes	no
Q8JZV9	BDH2_MOUSE	1, ., 1, ., 1, ., 3, 0	0.3333	0.8669	0.9836	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3488	0.8848	0.9723	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3796	0.8776	0.9384	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3796	0.8776	0.9384	yes	no
Q59787	DHSO_RHOSH	1, ., 1, ., 1, ., 1, 4	0.3503	0.8956	0.9726	yes	no
D4A1J4	BDH2_RAT	1, ., 1, ., 1, ., 3, 0	0.3333	0.8669	0.9836	yes	no
Q561X9	BDH2_DANRE	1, ., 1, ., 1, ., 3, 0	0.3515	0.8561	0.9714	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3268	0.8489	0.9516	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3449	0.8848	0.9723	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3636	0.8992	0.9505	yes	no
Q9WYG0	Y325_THEMA	1, ., -, ., -, ., -	0.3837	0.8705	0.9641	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3463	0.8489	0.9516	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921
3rd Layer	1.5.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.295	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.n1	LOW CONFIDENCE prediction!
3rd Layer	1.5.1.33	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.VIII.848.1	hypothetical protein (264 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00081696	hypothetical protein (214 aa)			•						0.476

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	278
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-88
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	8e-77
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-64
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-63
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-62
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-62
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-57
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-55
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-55
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-53
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-53
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-52
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-51
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-51
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-51
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-50
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-50
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-50
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-50
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-49
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-49
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-49
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-49
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-48
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-47
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	6e-47
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-46
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-45
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-45
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-44
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-43
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-43
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-43
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-43
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-42
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-42
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-41
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-41
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-41
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-41
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	6e-41
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	8e-41
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-40
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-40
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-40
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-40
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-40
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	7e-40
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	6e-39
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-39
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	8e-39
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-38
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-38
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-38
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-38
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-38
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-38
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-37
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-36
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-36
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-36
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-36
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-35
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	8e-35
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	9e-35
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-34
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-34
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-34
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-34
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-34
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-34
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-34
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	8e-34
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-33
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-33
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	7e-33
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-32
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-32
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-32
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-32
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	5e-32
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-32
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-31
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-31
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-31
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	6e-31
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-31
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	7e-31
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	7e-31
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	9e-31
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-30
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-30
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-30
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-30
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-30
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-30
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-30
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-30
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-30
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	7e-30
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	9e-30
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-29
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-29
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-29
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-29
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-29
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	5e-29
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	7e-29
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-29
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	9e-29
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-28
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-28
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-28
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	6e-28
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-28
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-28
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-28
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-27
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-27
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	1e-26
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-26
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-26
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-26
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-26
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-26
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-26
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-26
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-26
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-26
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	9e-26
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-25
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-25
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-25
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-25
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-25
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-25
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	3e-25
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-25
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-24
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-24
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	6e-24
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-23
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-23
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-23
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	5e-23
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	8e-23
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	4e-22
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-22
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-22
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	6e-22
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	7e-22
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	7e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-21
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-21
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-21
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	6e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	7e-21
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	8e-21
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-20
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-20
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-20
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	3e-20
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	5e-20
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	7e-20
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-20
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-19
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-19
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-19
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	7e-19
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	7e-19
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	7e-19
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	8e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-19
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-18
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-18
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	3e-18
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-18
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-18
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-18
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-17
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	6e-16
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-15
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-15
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-15
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-15
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-15
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	6e-15
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-14
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-14
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-14
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-14
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-13
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-13
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-13
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-13
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	5e-13
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	7e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	1e-12
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-12
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-12
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	4e-12
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-11
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-11
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	1e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-10
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-10
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	2e-10
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-10
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	3e-10
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	4e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-10
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	6e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-09
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-09
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	9e-09
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-08
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	1e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-08
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	6e-08
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-07
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	1e-06
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	3e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	3e-06
pfam08659	181	pfam08659, KR, KR domain	3e-06
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	5e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-05
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	3e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	3e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	4e-05
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	5e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	1e-04
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-04
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	2e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	6e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	6e-04
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	0.001
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.001
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	0.001
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	0.001
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	0.001

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  263 bits (674), Expect = 1e-88
 Identities = 124/258 (48%), Positives = 176/258 (68%), Gaps = 13/258 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYIHCDV 70
           RL GKVA+ITGGA GIG ATA+LFA++GA +VIADI D+ G A+A+ +G     ++HCDV
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGI 129
           T E DV +AV  AV+  G+LDIMFNNAG+ G+   SI   ++E+ + +L VN+ G   G 
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           KHAA+ MI   +KGSI+  +S A ++GGL  HAY+ SK A++GL RS A ELG+HGIRVN
Sbjct: 121 KHAARVMI-PAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           C+SP+GV + +L            ++ E + + VR + +L  G +   ED+A A L+LAS
Sbjct: 180 CVSPYGVATPLLTAG-------FGVEDEAIEEAVRGAANLK-GTALRPEDIAAAVLYLAS 231

Query: 250 EEAGFITAHNLVIDGGYT 267
           +++ +++  NLV+DGG T
Sbjct: 232 DDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  234 bits (599), Expect = 8e-77
 Identities = 119/272 (43%), Positives = 173/272 (63%), Gaps = 14/272 (5%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR----Y 65
           L S+RL GKVA++TGGA GIG +  +LF ++GA + I D+ D+LG  +  ++GG     +
Sbjct: 11  LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCF 70

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGS-ITSLNMEDVKFLLSVNLNG 124
            HCDVT E+DV  AV   V   G LDIM NNAG++G     I ++ + + + +  VN+ G
Sbjct: 71  FHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKG 130

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +  G+KHAA+ MI   +KGSI+   S A+ +GGL  HAY+ SK A++GL RS A ELGKH
Sbjct: 131 VFLGMKHAARIMIP-LKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKH 189

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVA 241
           GIRVNC+SP+ VP+ + +     +L + D + E+     R      + L+G   +++DVA
Sbjct: 190 GIRVNCVSPYAVPTALAL----AHLPE-DERTEDALAGFRAFAGKNANLKGVELTVDDVA 244

Query: 242 QAALFLASEEAGFITAHNLVIDGGYTTGTSSM 273
            A LFLAS+EA +I+  NL+IDGG+T    S+
Sbjct: 245 NAVLFLASDEARYISGLNLMIDGGFTCTNHSL 276

Length = 280

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  200 bits (512), Expect = 4e-64
 Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 21/261 (8%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIG-----GRYI 66
            +L GKVA++TG + GIG A A+L A+ GA +VIA  ++E  A  L   I         +
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+ EEDVE+ V   V   G++DI+ NNAGIS + G +T +  E+   ++ VNL G++
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              ++A   MI+ ++ G I+  SS   ++G      YS SK A+    ++ A EL   GI
Sbjct: 120 LLTRYALPYMIK-RKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P  + +EM           +    E+   +  +      GR    E++A+  LF
Sbjct: 179 RVNAVAPGAIDTEMW----------SSFSEEDKEGLAEEI---PLGRLGKPEEIAKVVLF 225

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS++A +IT   + +DGG+T
Sbjct: 226 LASDDASYITGQIITVDGGWT 246

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  197 bits (504), Expect = 8e-63
 Identities = 90/261 (34%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYIHC 68
            RL GKVA++TG + GIG   A+ FA  GA +V+ D  +E    +A+ I        +  
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV+ E DVE+AV  A+   G +DI+ NNAG +   G +  ++  +   + +VN+      
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A  AM  G+  G+I+  +S+A +        Y+ SK A+I L ++ A ELG   IRV
Sbjct: 121 TQAAVPAMR-GEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMK--PEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           N ++P  V + +L         +A M     E       +  L  GR  + ED+A AALF
Sbjct: 180 NAVAPVVVETGLL---------EAFMGEPTPENRAKFLATIPL--GRLGTPEDIANAALF 228

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS+EA +IT   LV+DGG  
Sbjct: 229 LASDEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  195 bits (499), Expect = 2e-62
 Identities = 96/248 (38%), Positives = 133/248 (53%), Gaps = 18/248 (7%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIHCDVTKEED 75
           A++TG + GIG A A+  A  GA +V+AD     L EL A  A       +  DV+ EED
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           VE+ V  A+   G+LDI+ NNAGI+   G +  L  ED   +L VNL G+    + A   
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIAR-PGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           M + Q  G I+  SS A +       AY+ SK A+ GL RS A EL  +GIRVN ++P  
Sbjct: 120 MKK-QGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 196 VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI 255
           V + ML          A + PEE  K +  +  L  GR  + E+VA+A +FLAS+EA +I
Sbjct: 179 VDTPML----------AKLGPEEAEKELAAAIPL--GRLGTPEEVAEAVVFLASDEASYI 226

Query: 256 TAHNLVID 263
           T   + +D
Sbjct: 227 TGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  195 bits (498), Expect = 5e-62
 Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 20/258 (7%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIH 67
             L GK A++TG +RGIG A A   A +GA +VI D  +E   ALA+ +       R + 
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV+ E  V + +  AV   G LDI+ NNAGI+     +  ++ ED   ++ VNL G  +
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD-ALLPRMSEEDWDRVIDVNLTGTFN 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++ A   MI+  R G I+  SS + + G      YS +K  +IG  ++ A EL   GI 
Sbjct: 120 VVRAALPPMIK-ARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGIT 178

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN ++P  + ++M         G  +    E+ K +     L  GR    E+VA A  FL
Sbjct: 179 VNAVAPGFIDTDMTE-------GLPEEVKAEILKEI----PL--GRLGQPEEVANAVAFL 225

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS+ A +IT   + ++GG
Sbjct: 226 ASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  183 bits (467), Expect = 2e-57
 Identities = 98/261 (37%), Positives = 143/261 (54%), Gaps = 18/261 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDV 70
            RL GKVA++TGGARG+G A A+L    GA +V++DILDE G A A+ +G   R+ H DV
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T E+   + V  A    G+LD++ NNAGI  +GG++ +  +E+ + LL +NL G+  G +
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGIL-TGGTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH--GIRV 188
                M E    GSII  SS   ++G  A  AY+ SK A+ GL +S A E      GIRV
Sbjct: 120 AVIPPMKEAGG-GSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRV 178

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  + + M            +     +            GR+   +++A A ++LA
Sbjct: 179 NSVHPGYIYTPMTDELLIAQGEMGNYPNTPM------------GRAGEPDEIAYAVVYLA 226

Query: 249 SEEAGFITAHNLVIDGGYTTG 269
           S+E+ F+T   LV+DGGYT G
Sbjct: 227 SDESSFVTGSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  179 bits (456), Expect = 1e-55
 Identities = 99/258 (38%), Positives = 140/258 (54%), Gaps = 13/258 (5%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT 71
           S+RL G+VAVITGG  GIG ATA+  A  GA +V+ DI  E G A A  +GG ++  DVT
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVT 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGIS-GSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
            E+ V +    A    G +DI FNNAGIS     SI +  ++  + +  VNL  +    K
Sbjct: 62  DEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCK 121

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVN 189
            A   M+  Q KGSII T+S  A+MG   S  +Y+ SK  ++ ++R    +  + GIRVN
Sbjct: 122 AALPHMVR-QGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVN 180

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            + P  V + +L   + K        PE   +  R    +  GR A  E++A A  FLAS
Sbjct: 181 ALCPGPVNTPLLQELFAK-------DPE---RAARRLVHVPMGRFAEPEEIAAAVAFLAS 230

Query: 250 EEAGFITAHNLVIDGGYT 267
           ++A FITA   ++DGG +
Sbjct: 231 DDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  178 bits (453), Expect = 3e-55
 Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 24/264 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA------DILDELGAALASTIGGR--Y 65
            L+GKVA++TG + GIG A A+  A  GA +V+A      +  + L AA+    GGR   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 66  IHCDVT-KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           +  DV+  EE VE+ V  A    G++DI+ NNAGI+G    +  L  ED   ++ VNL G
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
                + A   M    +K  I+  SS A + G     AY+ SK A+IGL ++ A EL   
Sbjct: 122 AFLLTRAALPLM----KKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN ++P  + + M        L         +            GR  + E+VA A 
Sbjct: 178 GIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPL----------GRLGTPEEVAAAV 227

Query: 245 LFLAS-EEAGFITAHNLVIDGGYT 267
            FLAS E A +IT   L +DGG  
Sbjct: 228 AFLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  174 bits (442), Expect = 2e-53
 Identities = 95/260 (36%), Positives = 128/260 (49%), Gaps = 17/260 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTIGGRYI--HCDVT 71
           L G   ++TGGA GIG A A+ FAE GA + + D+    L A  A   G +      DV 
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVA 68

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
               VE     AV   G LD++ NNAGI+G  G I  +  E  +  L+VNLNG  +  + 
Sbjct: 69  DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARA 128

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           A   +      G II  SS A  +G    +  Y+ SK A++GL +S A ELG  GIRVN 
Sbjct: 129 AVPLLKASGHGGVIIALSSVAGRLGYPGRTP-YAASKWAVVGLVKSLAIELGPLGIRVNA 187

Query: 191 ISPHGVPSEMLVN-----AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I P  V    +       A +  +G  +M+ E + K+     SL  GR    ED+A  AL
Sbjct: 188 ILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKI-----SL--GRMVEPEDIAATAL 240

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FLAS  A +IT   + +DG 
Sbjct: 241 FLASPAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  173 bits (440), Expect = 3e-53
 Identities = 86/263 (32%), Positives = 123/263 (46%), Gaps = 20/263 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY-----I 66
           ++ L G+VA++TG ARGIG A A   A +GA +++ DI  +  AA A  +          
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARAR 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV     +++AV   V   G+LDI+  NAGI         ++ E  + ++ VNL G  
Sbjct: 61  QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLT-PFAEMDDEQWERVIDVNLTGTF 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEAIIGLARSTACELGKHG 185
              + A  A+I     G I+ TSS A    G      Y+ SK  ++G  R+ A EL    
Sbjct: 120 LLTQAALPALIR-AGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARN 178

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN + P GV + M  N       +A               ++  GR    ED+A A L
Sbjct: 179 ITVNSVHPGGVDTPMAGNLGDAQWAEAIAA------------AIPLGRLGEPEDIAAAVL 226

Query: 246 FLASEEAGFITAHNLVIDGGYTT 268
           FLAS+EA +IT   L +DGG T 
Sbjct: 227 FLASDEARYITGQTLPVDGGATL 249

Length = 251

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  170 bits (433), Expect = 3e-52
 Identities = 98/266 (36%), Positives = 140/266 (52%), Gaps = 26/266 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----AALASTIGG--RY 65
           S   +GKVA++TGGA GIG ATA  FA  GA +V+AD  D  G     AL    GG   +
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVAD-RDAAGGEETVALIREAGGEALF 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           + CDVT++ +V++ V   ++  G+LD  FNNAGI    G +   +  +   ++ VN+ G+
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
              +K+    M+  Q  G+I+ T+S A +        Y+ SK A+IGL +S A E  K G
Sbjct: 121 WLCMKYQIPLMLA-QGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKG 179

Query: 186 IRVNCISPHGVPSEMLVNAY----RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
           IRVN + P  + ++M   AY    RK    A M P               GR   +E+VA
Sbjct: 180 IRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP--------------VGRIGKVEEVA 225

Query: 242 QAALFLASEEAGFITAHNLVIDGGYT 267
            A L+L S+ A F T H L++DGG T
Sbjct: 226 SAVLYLCSDGASFTTGHALMVDGGAT 251

Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  168 bits (428), Expect = 2e-51
 Identities = 92/258 (35%), Positives = 136/258 (52%), Gaps = 16/258 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC--DVT 71
           RL GKVA++TG   G G   A+ FA+ GA +VIADI  +    +A+ IG   I    DVT
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVT 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           K  DVE+ V  A+S  G+LDI+ NNAGI+     +  ++ E+   + +VN+  I    + 
Sbjct: 62  KRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQA 121

Query: 132 AAKAMIEGQRKGSIICTSSSAAI--MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
               M E    G II  +S+A +    GL    Y+ SK  ++   ++ A EL    IRVN
Sbjct: 122 LVPHMEEQG-GGVIINIASTAGLRPRPGLT--WYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           C+ P    + +L      ++G  +  PE   K      ++  GR ++ +D+A AAL+LAS
Sbjct: 179 CLCPVAGETPLL----SMFMG--EDTPENRAKF---RATIPLGRLSTPDDIANAALYLAS 229

Query: 250 EEAGFITAHNLVIDGGYT 267
           +EA FIT   L +DGG  
Sbjct: 230 DEASFITGVALEVDGGRC 247

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  168 bits (427), Expect = 2e-51
 Identities = 85/255 (33%), Positives = 129/255 (50%), Gaps = 24/255 (9%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYI--HCDVTK 72
           KVA++TG +RGIG A A   A  GA + + D  +E  A     I   GG       DV+ 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGIK 130
            E VE+ V    +  G +DI+ NNAGI+        + M +  +  +++VNL G+ +  +
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDN---LLMRMSEEDWDAVINVNLTGVFNVTQ 117

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
              +AMI+ +R G II  SS   ++G      Y+ SK  +IG  +S A EL   GI VN 
Sbjct: 118 AVIRAMIK-RRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P  + ++M            D  PE+V + +     L  GR  + E+VA A  FLAS+
Sbjct: 177 VAPGFIDTDMT-----------DALPEKVKEKILKQIPL--GRLGTPEEVANAVAFLASD 223

Query: 251 EAGFITAHNLVIDGG 265
           +A +IT   L ++GG
Sbjct: 224 DASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  166 bits (424), Expect = 7e-51
 Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 21/260 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG-GRY 65
              L G+VA++TG ARG+G A A   A  GA +V+      +  +EL  A+ +     + 
Sbjct: 1   MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQA 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DVT +  +E+AV  AV   G++DI+ NNAGI      +  ++ ++   ++ VNL+G+
Sbjct: 61  VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGV 119

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            H ++     M + QR G I+  SS A + G      Y+ +K  ++GL ++ A EL ++G
Sbjct: 120 FHLLRAVVPPMRK-QRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN ++P  + ++M            +   EE             GRS + ED+A+A  
Sbjct: 179 ITVNMVAPGDIDTDM-----------KEATIEE--AREAKDAETPLGRSGTPEDIARAVA 225

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FL S+ + +IT   + + GG
Sbjct: 226 FLCSDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  166 bits (424), Expect = 1e-50
 Identities = 92/263 (34%), Positives = 130/263 (49%), Gaps = 16/263 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L GKVA++TG A GIG   A   A+ GA +VIAD+ DE  AA A  +   GG+   +  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT EE + + +  AV   G +DI+ NNAGI      I     E  K ++++ L+G    
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHV-APIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K A   M   Q  G II  +S   ++G     AY  +K  +IGL +  A E   HG+ V
Sbjct: 120 TKAALPIMKA-QGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR----GRSASIEDVAQAA 244
           N I P  V + ++         +  +  EEV + V     LL      R  ++E++A  A
Sbjct: 179 NAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDV-----LLPLVPQKRFTTVEEIADYA 233

Query: 245 LFLASEEAGFITAHNLVIDGGYT 267
           LFLAS  A  +T    V+DGG+T
Sbjct: 234 LFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  165 bits (421), Expect = 2e-50
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 25/268 (9%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY---- 65
           L    L GKVA++TGG+RGIG A A+  AE GA + I           A  +  +Y    
Sbjct: 1   LDLFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKT 60

Query: 66  --IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
               CDV+ +E VE   +      G++DI+  NAGI+           E    ++ VNLN
Sbjct: 61  KAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGIT-VHKPALDYTYEQWNKVIDVNLN 119

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACEL 181
           G+ +  + AAK   +   KGS+I T+S +  +        AY+ SK A+I LA+S A E 
Sbjct: 120 GVFNCAQAAAKIFKKQG-KGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEW 178

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
            K+ IRVN ISP  + +++     ++   K     P                R A  E++
Sbjct: 179 AKYFIRVNSISPGYIDTDLTDFVDKELRKKWESYIP--------------LKRIALPEEL 224

Query: 241 AQAALFLASEEAGFITAHNLVIDGGYTT 268
             A L+LAS+ + + T  +L+IDGGYT 
Sbjct: 225 VGAYLYLASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  165 bits (420), Expect = 3e-50
 Identities = 93/259 (35%), Positives = 137/259 (52%), Gaps = 13/259 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDV 70
            RL GKVA++TG A GIG A A+ +   GA +VIADI        A  IG     +  DV
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T+++ ++  V  AV   G +DI+FNNA +      I  ++ +    L +VN+ G+   ++
Sbjct: 62  TRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
             A+ M+E  R G II  +S A   G  L SH Y  +K A+I   +S A  L +HGI VN
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGRRGEALVSH-YCATKAAVISYTQSAALALIRHGINVN 179

Query: 190 CISPHGVPSEM--LVNA-YRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            I+P  V + M   V+A + +Y  +    P E  ++V ++  L  GR    +D+   ALF
Sbjct: 180 AIAPGVVDTPMWDQVDALFARYENR---PPGEKKRLVGEAVPL--GRMGVPDDLTGMALF 234

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS +A +I A    +DGG
Sbjct: 235 LASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  165 bits (419), Expect = 5e-50
 Identities = 97/255 (38%), Positives = 140/255 (54%), Gaps = 9/255 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI---GGR--YIHCDV 70
            KVA+ITG A+GIG A A+  A +G +IV+AD+ L+E   +    I   G     +  DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T ++DVE+ +  AV   G  D+M NNAGI      + ++  ED+K + +VN+ G+L GI+
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGI-APITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            AA+   +    G II  SS A + G     AYS SK A+ GL ++ A EL   GI VN 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
            +P  V +EM      + +G+   KPE        S S+  GR +  EDVA    FLASE
Sbjct: 181 YAPGIVKTEMWDYIDEE-VGEIAGKPEGEGFAEFSS-SIPLGRLSEPEDVAGLVSFLASE 238

Query: 251 EAGFITAHNLVIDGG 265
           ++ +IT   +++DGG
Sbjct: 239 DSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  164 bits (417), Expect = 1e-49
 Identities = 95/257 (36%), Positives = 137/257 (53%), Gaps = 18/257 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVT 71
            L+GKVAV+TGGA GIG A A+LFA  GA + + D  +++    A  +GG    + CDV+
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVS 71

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             + VE+AV   +S  G++DI+ N+AG+         ++ ED    + +NL G     + 
Sbjct: 72  DSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEEDWDKTIDINLKGSFLMAQA 130

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNC 190
             + MI     G I+  +S A ++  L  H AY  SK  ++G+ +  A E G +GI VN 
Sbjct: 131 VGRHMIA-AGGGKIVNLASQAGVV-ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNA 188

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISP  V +E+   A+    G+   K             +  GR A  E++A AALFLAS+
Sbjct: 189 ISPTVVLTELGKKAWAGEKGER-AKKL-----------IPAGRFAYPEEIAAAALFLASD 236

Query: 251 EAGFITAHNLVIDGGYT 267
            A  IT  NLVIDGGYT
Sbjct: 237 AAAMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  172 bits (438), Expect = 3e-49
 Identities = 96/264 (36%), Positives = 133/264 (50%), Gaps = 18/264 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY----IHC 68
           K L GKVA++TG A GIG ATAK  A  GA +V+AD+ +E   A A+ +GG      + C
Sbjct: 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVAC 477

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT E  V++A   A    G +DI+ +NAGI+ S G I   + ED +    VN  G    
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAIS-GPIEETSDEDWRRSFDVNATGHFLV 536

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A + M      GSI+  +S  A+  G    AY  +K A + L R  A ELG  GIRV
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596

Query: 189 NCISPHGV-------PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
           N ++P  V         E +      Y     +  EE+ +  R   +LL+ R  + EDVA
Sbjct: 597 NGVNPDAVVRGSGIWTGEWIEARAAAY----GLSEEELEEFYRA-RNLLK-REVTPEDVA 650

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
           +A +FLAS      T   + +DGG
Sbjct: 651 EAVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  162 bits (412), Expect = 4e-49
 Identities = 82/254 (32%), Positives = 125/254 (49%), Gaps = 25/254 (9%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGRY-----IHCDVTKE 73
           A++TG +RGIG A A   A+ GA ++I     E GA  +   +         + CDV+  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGIKH 131
           EDV++ V       G +DI+ NNAGI+        + M++  +  ++  NL G+ +  + 
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDN---LLMRMKEEDWDAVIDTNLTGVFNLTQA 117

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
             + MI+ QR G II  SS   +MG      Y+ SK  +IG  +S A EL    I VN +
Sbjct: 118 VLRIMIK-QRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  + ++M            D   E+V K +     L  GR  + E+VA A  FLAS+E
Sbjct: 177 APGFIDTDM-----------TDKLSEKVKKKILSQIPL--GRFGTPEEVANAVAFLASDE 223

Query: 252 AGFITAHNLVIDGG 265
           A +IT   + +DGG
Sbjct: 224 ASYITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  162 bits (413), Expect = 4e-49
 Identities = 95/259 (36%), Positives = 136/259 (52%), Gaps = 21/259 (8%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGRY--I 66
             L GKVA++TG +RGIG A A+  A  GA++VI     E GA AL + I   GG+   +
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+  E VE AV  A +  G +DI+ NNAGI+     +  +  ED   ++  NL G+ 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           +  K  A+ M++ QR G II  SS   +MG      Y+ SK  +IG  +S A EL   GI
Sbjct: 120 NLTKAVARPMMK-QRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGI 178

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            VN ++P  + ++M            D  PE+V + +     L  GR    E++A A  F
Sbjct: 179 TVNAVAPGFIETDM-----------TDALPEDVKEAILAQIPL--GRLGQPEEIASAVAF 225

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS+EA +IT   L ++GG
Sbjct: 226 LASDEAAYITGQTLHVNGG 244

Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  159 bits (404), Expect = 6e-48
 Identities = 90/253 (35%), Positives = 123/253 (48%), Gaps = 9/253 (3%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC--DVTK 72
           L GKVA++TG   GIGAA A   A  GA +V+ADI      A+ + I G  +    DVT 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E+ V +    AV   G LD++ NNAG      +I   ++      +++NL G     +HA
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHA 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A  MI  +  GSI+  SS A   G     AY  SK AI  L R+ A EL   GIR N ++
Sbjct: 121 APRMIA-RGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALA 179

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + + +L+     + G                   L+GR    EDVA A +FL S++A
Sbjct: 180 PGLIDTPLLLAKLAGFEGALGPGGF------HLLIHQLQGRLGRPEDVAAAVVFLLSDDA 233

Query: 253 GFITAHNLVIDGG 265
            FIT   L +DGG
Sbjct: 234 SFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  158 bits (402), Expect = 2e-47
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 11/258 (4%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY-------IHC 68
             +VAV+ GG + +GA      AE G  + +ADI  E  A +A  I   Y          
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D T E+ V +  R      G++D++  NAGI+ +   IT   + D    L VNL G    
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAA-FITDFQLGDFDRSLQVNLVGYFLC 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +  ++ MI    +G II  +S +  +G   +  YS +K   +GL +S A +L ++GI V
Sbjct: 120 AREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITV 179

Query: 189 NCISPHG-VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           + +     + S M  +   +Y  K  +KP+EV +   D   L RG     +DV    LF 
Sbjct: 180 HSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG--CDYQDVLNMLLFY 237

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS +A + T  ++ + GG
Sbjct: 238 ASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  157 bits (398), Expect = 6e-47
 Identities = 96/260 (36%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIHCD 69
           RL G+VA++TG   GIG ATAKLFA  GA +V+AD      + + AA+A+         D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V   E VE+ V    +  G+LD++ NNAG  G GG++ + +  D   ++ VN+ G+    
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGF-GCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           K+A   M   Q  GSI+ T+S  A+ GG    AY  SK AI  L R+ A +    GIRVN
Sbjct: 121 KYAIPIMQR-QGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            ++P  + +      +R+   +    PE + + +R    +   R  + E+VAQAALFLAS
Sbjct: 180 AVAPGTIDTPY----FRRIFARHA-DPEALREALRARHPM--NRFGTAEEVAQAALFLAS 232

Query: 250 EEAGFITAHNLVIDGGYTTG 269
           +E+ F T   LV+DGG+   
Sbjct: 233 DESSFATGTTLVVDGGWLAA 252

Length = 252

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  156 bits (396), Expect = 1e-46
 Identities = 104/261 (39%), Positives = 136/261 (52%), Gaps = 24/261 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHC- 68
           RL GKVA+ITG + GIG A AKLFA  GA +V+       LD+L  A     GG  +   
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQL-VAEIRAEGGEAVALA 61

Query: 69  -DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV  E   ++ V LAV   G LDI FNNAG  G  G +  +++E  +  L+ NL     
Sbjct: 62  GDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFL 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSS---SAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           G KH   AM+  +  GS+I TS+     A   G+A  AY+ SK  +IGL +  A E G  
Sbjct: 122 GAKHQIPAMLA-RGGGSLIFTSTFVGHTAGFPGMA--AYAASKAGLIGLTQVLAAEYGAQ 178

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN + P G  + M         G+A     E    V    +L   R A  E++AQAA
Sbjct: 179 GIRVNALLPGGTDTPM---------GRAMGDTPEALAFVAGLHAL--KRMAQPEEIAQAA 227

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           LFLAS+ A F+T   L++DGG
Sbjct: 228 LFLASDAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  153 bits (389), Expect = 2e-45
 Identities = 88/263 (33%), Positives = 131/263 (49%), Gaps = 20/263 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGR-- 64
             RL GKVA++TG A+GIGAA A+ FA  GA + +AD+   L    A+ I     G R  
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVL 61

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DVT    V +AV  A    G LD++ NNAGI+     +  +  ED +   +V+L+G
Sbjct: 62  AVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLA-MTDEDWRRCFAVDLDG 120

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAA--IMGGLASHAYSLSKEAIIGLARSTACELG 182
             +G +     M+E + +GSI+  +S+ A  I+ G     Y ++K  ++GL R+   E  
Sbjct: 121 AWNGCRAVLPGMVE-RGRGSIVNIASTHAFKIIPG--CFPYPVAKHGLLGLTRALGIEYA 177

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
              +RVN I+P G     L   +  +  + D        +          R    E+VA 
Sbjct: 178 ARNVRVNAIAP-GYIETQLTEDW--WNAQPDPAAARAETLALQPM----KRIGRPEEVAM 230

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
            A+FLAS+EA FI A  + IDGG
Sbjct: 231 TAVFLASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  151 bits (384), Expect = 7e-45
 Identities = 86/253 (33%), Positives = 131/253 (51%), Gaps = 8/253 (3%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCDVTK 72
           KVA++TGGA+GIG   A+  A++G  + +AD+ +E     A  I   GG+      DV+ 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           ++ V SA+  A    G  D+M NNAG++     I  +  E++K + +VN+ G+L GI+ A
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPIT-PILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+   +    G II  +S A   G     AYS +K A+ GL ++ A EL   GI VN   
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V + M      +   +   KP         S  +  GR +  EDVA    FLASE++
Sbjct: 180 PGIVKTPMWEEIDEE-TSEIAGKPIGE-GFEEFSSEIALGRPSEPEDVAGLVSFLASEDS 237

Query: 253 GFITAHNLVIDGG 265
            +IT  ++++DGG
Sbjct: 238 DYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  150 bits (380), Expect = 3e-44
 Identities = 90/270 (33%), Positives = 124/270 (45%), Gaps = 26/270 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----------------AALA 58
           L GKVA ITG ARG G A A   A  GA I+  D+   L                 A L 
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 59  STIGGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF 116
             +G + +    DV    +V + V   V   G+LD++  NAG+  S G    L+ E    
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVL-SYGRSWELSEEQWDT 119

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           +L +NL G+    K     MIE    GSII TSS A +        Y+ +K  ++GL ++
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVN-AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
            A EL ++GIRVN I P+ V + M+   A R+   K                  + G   
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFM-----PALPVSG-FV 233

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             EDVA A L+LAS+E+ +IT H L +D G
Sbjct: 234 PPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  147 bits (374), Expect = 2e-43
 Identities = 87/257 (33%), Positives = 125/257 (48%), Gaps = 19/257 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCD 69
           L GK A++TG ARG+GAA A+  AE GA +   D L      LA+ +   GGR   I  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +     V+     A +  G LD + NNAGI+ S  S T L+++    +++VN+ G    +
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLML 123

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           + A   + +  R G I+  +S  A+ G     AY  SK A+IG+ RS A ELG  GI VN
Sbjct: 124 RAALPHLRDSGR-GRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I+P    +E                 +E         +L   R    +DVA A LFL S
Sbjct: 183 AIAPGLTATEATAYV----------PADERHAYYLKGRAL--ERLQVPDDVAGAVLFLLS 230

Query: 250 EEAGFITAHNLVIDGGY 266
           + A F+T   L ++GG+
Sbjct: 231 DAARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  147 bits (372), Expect = 4e-43
 Identities = 85/259 (32%), Positives = 140/259 (54%), Gaps = 18/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELG-AALASTIGGRYIHC- 68
           L+GKVA+ITG + GIGA TA LFA  GA + +    A+ L+E   + L + +  + I   
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 69  --DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             D+T+EE  +  +   ++  G+LDI+ NNAGI   GG     ++E+   ++++NL  ++
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGG-GEDQDIEEYDKVMNLNLRAVI 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           +  K A   +I+   KG I+  SS A          Y +SK A+    R TA EL   G+
Sbjct: 120 YLTKLAVPHLIK--TKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN +SP      ++V  + + +G  + +  +     +++  L  GR  ++++VA+A  F
Sbjct: 178 RVNSVSP-----GVIVTGFHRRMGMPEEQYIKFLSRAKETHPL--GRPGTVDEVAEAIAF 230

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS+ + FIT   L +DGG
Sbjct: 231 LASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  147 bits (372), Expect = 4e-43
 Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 9/256 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALAST-IGGRYIHCDVT 71
           GKVA++T  + GIG A A+  A  GA + I     + L+   + L +   G   +  D+T
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             ED++  V  A    G++DI+ NNAG     G    L  ED      + L  ++  ++ 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
               M E +  G I+  SS             ++++  +IGL ++ + EL   G+ VN +
Sbjct: 120 VLPGMKE-RGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSV 178

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
            P  + +E +         K  +  EE  K V     L  GR    E++A    FLASE+
Sbjct: 179 LPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL--GRVGKPEELAALIAFLASEK 236

Query: 252 AGFITAHNLVIDGGYT 267
           A +IT   +++DGG T
Sbjct: 237 ASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  145 bits (369), Expect = 9e-43
 Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCD 69
           L GKVA++TG +RGIG   A   AE GA+IVI    +E        I           CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V+ EE +++AV       G++DI+ NNAGI     +       + + ++ VNLNG+    
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEF-PEAEWRDVIDVNLNGVFFVS 121

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +  A+ MI+ Q  G II   S  + +GG    AY+ SK  + GL ++ A E  +HGI+VN
Sbjct: 122 QAVARHMIK-QGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I+P    +EM      + +       +++ K +        GR    ED+  AA+FLAS
Sbjct: 181 AIAPGYFATEM-----TEAVVADPEFNDDILKRI------PAGRWGQPEDLVGAAVFLAS 229

Query: 250 EEAGFITAHNLVIDGGYT 267
           + + ++    + +DGG+ 
Sbjct: 230 DASDYVNGQIIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  152 bits (385), Expect = 9e-43
 Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 13/254 (5%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTKEE 74
            +V ++TG A GIG A  + FA  G  +V+AD   E     A ++G  +  +  DV+ E 
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEA 64

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSIT-SLNMEDVKFLLSVNLNGILHGIKHAA 133
            +           G++D++ NNAG++    + T    +E+   L ++NL G     + A 
Sbjct: 65  QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREAL 124

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + MIE     +I+  +S A ++      AYS SK A+I L RS ACE    GIRVN + P
Sbjct: 125 RLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLP 184

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             V ++M+    R   GK D         VR    +  GR    E++A+A  FLAS++A 
Sbjct: 185 GYVRTQMVAELERA--GKLDP------SAVR--SRIPLGRLGRPEEIAEAVFFLASDQAS 234

Query: 254 FITAHNLVIDGGYT 267
           +IT   LV+DGG+T
Sbjct: 235 YITGSTLVVDGGWT 248

Length = 520

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  144 bits (366), Expect = 3e-42
 Identities = 97/258 (37%), Positives = 133/258 (51%), Gaps = 18/258 (6%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY----IHCDVTK 72
           GKVA++TGGA GIG A AK  A  GA +V+ADI  E+   +A    G      + CDVT 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E  V+SA   AV   G LDI+ +NAGI+ S   I   ++ED    + +NL G     + A
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRSMDINLTGHFLVSREA 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            + M      G+I+  +S  A+  G  + AYS +K A   LAR  A E G+ GIRVN ++
Sbjct: 120 FRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVN 179

Query: 193 PHGVPS-----EMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           P  V       E +  A R    KA    EE  +    + +LL  R    EDVA+A + +
Sbjct: 180 PDAVFRGSKIWEGVWRAAR---AKAYGLLEEEYR----TRNLL-KREVLPEDVAEAVVAM 231

Query: 248 ASEEAGFITAHNLVIDGG 265
           ASE+ G  T   + +DGG
Sbjct: 232 ASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  144 bits (365), Expect = 3e-42
 Identities = 86/260 (33%), Positives = 122/260 (46%), Gaps = 24/260 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRYIHC- 68
           L GKVA++TG +RGIG A AK  A +GA +V+         +E+ A + +  GG+ I   
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAA-GGKAIAVQ 59

Query: 69  -DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV+    V      A    G +DI+ NNAG+      I   + E+   + +VN  G   
Sbjct: 60  ADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++ AAK + +G   G II  SSS          AY+ SK A+    R  A ELG  GI 
Sbjct: 119 VLQEAAKRLRDG---GRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGIT 175

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN ++P  V ++M       Y GK +   E   KM     S L GR    ED+A    FL
Sbjct: 176 VNAVAPGPVDTDMF------YAGKTEEAVEGYAKM-----SPL-GRLGEPEDIAPVVAFL 223

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           AS +  ++    +  +GGY 
Sbjct: 224 ASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  143 bits (362), Expect = 1e-41
 Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 20/260 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRYI--H 67
           L GKVA++TG + GIG A A   A  GA++V+      D  +E+       +GG+ I   
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEV-VEEIKAVGGKAIAVQ 59

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV+KEEDV +  + A+   G LDI+ NNAG+ G   S   + +ED   ++ VNL G   
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSH-EMTLEDWNKVIDVNLTGQFL 118

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A K   + + KG II  SS    +       Y+ SK  +  + ++ A E    GIR
Sbjct: 119 CAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIR 178

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN I+P  + +   +NA      +       +  M         GR    E++A AA +L
Sbjct: 179 VNAIAPGAINTP--INAEAWDDPEQRADLLSLIPM---------GRIGEPEEIAAAAAWL 227

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           AS+EA ++T   L +DGG T
Sbjct: 228 ASDEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 2e-41
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 23/263 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALAST-IGGRYIHC 68
            L+GK A++TGG+RG+G   A+   E GA +V+    A+ L+E  A L +  I   +I  
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAA 68

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV  E D+E      +   G +DI+ NNAG +  G       +E    ++++N+ G+   
Sbjct: 69  DVADEADIERLAEETLERFGHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLL 127

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGG----LASHAYSLSKEAIIGLARSTACELGKH 184
            +  AK  +  +  G II  +S A + G     + + AY+ SK A+I   R+ A E G H
Sbjct: 128 SQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPH 187

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN I+P   P++M     R  L +     E++      + + L GR    ED+  AA
Sbjct: 188 GIRVNAIAPGFFPTKMT----RGTLERLG---EDLL-----AHTPL-GRLGDDEDLKGAA 234

Query: 245 LFLASEEAGFITAHNLVIDGGYT 267
           L LAS+ +  IT   L +DGG +
Sbjct: 235 LLLASDASKHITGQILAVDGGVS 257

Length = 259

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  142 bits (360), Expect = 2e-41
 Identities = 84/254 (33%), Positives = 121/254 (47%), Gaps = 16/254 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
             +GK  ++TG + GIG A A   A+ GA +V A         LA   G   +  DV  +
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD 65

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
                A+R A++  G  D + N AGI+ S  S   +  E    +++VN  G     +H A
Sbjct: 66  A----AIRAALAAAGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVA 120

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           +AMI   R GSI+  SS AA++G     AY  SK A+  + R    ELG HGIRVN ++P
Sbjct: 121 RAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNP 180

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
               + M   A+        M       +      +  GR A ++DVA   LFL S+ A 
Sbjct: 181 TVTLTPMAAEAWSDPQKSGPM-------LAA----IPLGRFAEVDDVAAPILFLLSDAAS 229

Query: 254 FITAHNLVIDGGYT 267
            ++  +L +DGGYT
Sbjct: 230 MVSGVSLPVDGGYT 243

Length = 245

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  141 bits (358), Expect = 5e-41
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 20/260 (7%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIH-----CDVTKEE 74
            ++TG A+GIG A A+  AE GA +   D   E    L + +            DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
            V+  V+      G +D++ N AGI    G+I SL+ ED +   +VN  G+ +  +  + 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGIL-RLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            M   +R G+I+   S+AA +  +   AY+ SK A+  L +    EL  +GIR N +SP 
Sbjct: 120 RMKR-RRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPG 178

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-----GRSASIEDVAQAALFLAS 249
              +EM    +    G+         +++  S    R     G+ A   D+A A LFLAS
Sbjct: 179 STDTEMQRQLWNDEYGEQ--------QVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLAS 230

Query: 250 EEAGFITAHNLVIDGGYTTG 269
           + A  IT H+LV+DGG T G
Sbjct: 231 DLASHITMHDLVVDGGATLG 250

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  141 bits (358), Expect = 6e-41
 Identities = 91/260 (35%), Positives = 139/260 (53%), Gaps = 14/260 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC----- 68
           +LTGK A+ITG  +GIG   A++FA +GA++++ DI  E+   LA  + GR   C     
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVA 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV     V +A++ A   +G++DI+ NNAG+    GS   ++ ED  F + +N+ G+ + 
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 129 IKHAAKAMIEGQRKGSIICTSS-SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            K     MI  +  G I+  SS +  ++      AY+L+K AI+GL +S A E  + GIR
Sbjct: 121 TKAVLPEMIARKD-GRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN I P  V + M  +  R+        PE V   +  +  L   R A   +V + A FL
Sbjct: 180 VNAICPGYVRTPMAESIARQ---SNPEDPESVLTEMAKAIPL--RRLADPLEVGELAAFL 234

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           AS+E+ ++T    VIDGG T
Sbjct: 235 ASDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  141 bits (356), Expect = 8e-41
 Identities = 89/253 (35%), Positives = 134/253 (52%), Gaps = 14/253 (5%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEED 75
            GKVA+IT  A+GIG A A  FA  GA+++  DI +E    L    G      DVT +E 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITTRVLDVTDKEQ 60

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           V +        +G++D++FN AG    G SI     +D  F +++N+  +   IK     
Sbjct: 61  VAALA----KEEGRIDVLFNCAGFVHHG-SILDCEDDDWDFAMNLNVRSMYLMIKAVLPK 115

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
           M+  ++ GSII  SS A+ + G+ +   YS +K A+IGL +S A +  + GIR N I P 
Sbjct: 116 MLA-RKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPG 174

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
            V +  L     +   +A   PEE  K       L  GR A+ E+VA  A++LAS+E+ +
Sbjct: 175 TVDTPSL-----EERIQAQPDPEEALKAFAARQPL--GRLATPEEVAALAVYLASDESAY 227

Query: 255 ITAHNLVIDGGYT 267
           +T   +VIDGG++
Sbjct: 228 VTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  146 bits (371), Expect = 1e-40
 Identities = 91/254 (35%), Positives = 125/254 (49%), Gaps = 17/254 (6%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYI--HCDVTKEE 74
            +V  ITGGARGIG A A  FA  G  ++I D   E    LA  +G  ++    D+T E 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA 328

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
            VESA     +  G+LD++ NNAGI+         + ED   +  VNL+G     + AA+
Sbjct: 329 AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLA-SHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
            M     +G +I    S A +  L   +AY  SK A+  L+RS ACE    GIRVN ++P
Sbjct: 389 LM----SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP 444

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
            G      V A  K  G+AD        + R    +  GR    E+VA+A  FLAS  A 
Sbjct: 445 -GYIETPAVLAL-KASGRADFD-----SIRR---RIPLGRLGDPEEVAEAIAFLASPAAS 494

Query: 254 FITAHNLVIDGGYT 267
           ++    L +DGG+T
Sbjct: 495 YVNGATLTVDGGWT 508

Length = 520

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  140 bits (354), Expect = 2e-40
 Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 25/261 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
           L GKVA ITGG  GIG A AK FAE GA + IA    ++L+     ++S  GGR   I C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAG---ISGSGGSITSLNMEDVKFLLSVNLNGI 125
           DV   E VE+AV   +   G++DI+ NNA    ++       SL+    K ++ ++LNG 
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAP----AESLSPNGFKTVIDIDLNGT 116

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACELGKH 184
            +  K   K +IE +  GSI+  S++ A  G     H+ + +K  +  L RS A E G +
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHS-AAAKAGVDALTRSLAVEWGPY 175

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN I+P  +P+        +             KM+        GR  + E++A  A
Sbjct: 176 GIRVNAIAPGPIPTT---EGMERLAPSGK----SEKKMIERVPL---GRLGTPEEIANLA 225

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           LFL S+ A +I    LV+DGG
Sbjct: 226 LFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  139 bits (353), Expect = 3e-40
 Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 23/262 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTK 72
            +GK   +TG A+GIG A A  F E GA ++  D    L           +     DV+ 
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFD-QAFLTQE-----DYPFATFVLDVSD 59

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              V    +  ++  G LD++ N AGI    G+  SL+ ED +   +VN  G  +  +  
Sbjct: 60  AAAVAQVCQRLLAETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAV 118

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
                  QR G+I+   S+AA +  +   AY  SK A+  LA+    EL  +G+R N +S
Sbjct: 119 MPQFRR-QRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVS 177

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-----GRSASIEDVAQAALFL 247
           P    ++M      + L   +   ++V   +       +     G+ A  +++A A LFL
Sbjct: 178 PGSTDTDMQ-----RTLWVDEDGEQQV---IAGFPEQFKLGIPLGKIARPQEIANAVLFL 229

Query: 248 ASEEAGFITAHNLVIDGGYTTG 269
           AS+ A  IT  ++V+DGG T G
Sbjct: 230 ASDLASHITLQDIVVDGGATLG 251

Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  139 bits (352), Expect = 6e-40
 Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 15/259 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS--TIGGRY--IHC 68
           KRL  KVAVITG + GIG A+A   A+ GA+++  DI + +   +    + GG+    H 
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHV 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D++ E+ V+          G++D++FNNAG+  + G I    ++    +++V++ G    
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K     M+E  + GSII TSS +     L    Y+ +K A+I   +S A E G+ GIR 
Sbjct: 122 TKMLLPLMME--QGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRA 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR--GRSASIEDVAQAALF 246
           N I+P  + + ++               +E  K  R++   +   GR    E+VA+  +F
Sbjct: 180 NAIAPGTIETPLVDKL-------TGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF 232

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS+++ FIT   + IDGG
Sbjct: 233 LASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  138 bits (350), Expect = 6e-40
 Identities = 86/254 (33%), Positives = 126/254 (49%), Gaps = 20/254 (7%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEE 74
           GKVA++TGG  GIG      F E G  +V ADI +E GA  A   G    ++H DV  E 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
            V+  V   +   G++D++ NNA   GS G ++SL +E+   +LSVNL G     ++   
Sbjct: 61  LVKFVVYAMLEKLGRIDVLVNNAAR-GSKGILSSLLLEEWDRILSVNLTGPYELSRYCRD 119

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            +I+   KG II  +S+ A      S AY+ SK  ++ L  + A  LG   IRVNCISP 
Sbjct: 120 ELIKN--KGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISP- 175

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVR-DSGSLLRGRSASIEDVAQAALFLASEEAG 253
                        ++   + +      + + D      GR  + +D+A   LFL  ++AG
Sbjct: 176 ------------GWINTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAG 223

Query: 254 FITAHNLVIDGGYT 267
           FIT    ++DGG T
Sbjct: 224 FITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  138 bits (350), Expect = 7e-40
 Identities = 89/259 (34%), Positives = 131/259 (50%), Gaps = 14/259 (5%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCDVT 71
           GK A++TG A GIG A A+  A  GA++V+ D  +E   A A      GG   Y+  DVT
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           KE+++   +  A +  G LDI+ NNAGI      I     ED   +++V L    H I+ 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQHV-APIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A   M +    G II  +S+  ++      AY  +K  +IGL +  A E+ +HGI VN I
Sbjct: 120 ALPHMKKQGW-GRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAI 178

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCK---MVRDSGSLLRGRSASIEDVAQAALFLA 248
            P  V +  LV        K    PEE      M++   +    R  ++++VA+ AL+LA
Sbjct: 179 CPGYVRTP-LVEKQIADQAKTRGIPEEQVIREVMLKGQPT---KRFVTVDEVAETALYLA 234

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S+ A  IT   +V+DGG+T
Sbjct: 235 SDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  136 bits (344), Expect = 6e-39
 Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY------IHCDV 70
            +VAV+ GG + +G       AE G  + +ADI  E    +A  I   Y         D 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T E+ V +  +       ++D++  +AGI+ S   IT   + D    L VNL G     +
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSA-KITDFELGDFDRSLQVNLVGYFLCAR 120

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
             +K MI    +G II  +S +  +G   +  YS +K   +GL +S A +L +HGI VN 
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNS 180

Query: 191 ISPHG-VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           +     + S M  +   +Y  K  +K  EV +   D   L RG     +DV    LF AS
Sbjct: 181 LMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRG--CDYQDVLNMLLFYAS 238

Query: 250 EEAGFITAHNLVIDGG 265
            +A + T  ++ I GG
Sbjct: 239 PKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  136 bits (344), Expect = 6e-39
 Identities = 86/259 (33%), Positives = 137/259 (52%), Gaps = 17/259 (6%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
            S R  GKVA+ITGG RGIG A A+ F   GA + +     E  A      G   I CDV
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
              + V+ +  +     G++D++ NNAGI          + E    ++ +NLNG ++   
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYL-MPFEEFDEEKYNKMIKINLNGAIYTT- 118

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHA---YSLSKEAIIGLARSTACELGKHGIR 187
           +    +++  + G+I+  +S+A I  G A+     Y+++K  II L R  A ELGK+GIR
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGI--GTAAEGTTFYAITKAGIIILTRRLAFELGKYGIR 176

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL-LRGRSASIEDVAQAALF 246
           VN ++P  V ++M ++      GK+  + E++ ++ R+   L   G+    ED+A   LF
Sbjct: 177 VNAVAPGWVETDMTLS------GKSQEEAEKLRELFRNKTVLKTTGKP---EDIANIVLF 227

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS++A +IT   +V DGG
Sbjct: 228 LASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 8e-39
 Identities = 71/215 (33%), Positives = 101/215 (46%), Gaps = 12/215 (5%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA-----STIGGRYIHCDVTK 72
           KVA+ITGGA GIG ATAKL  + GA + I D  +  GAA         +   ++ CDVT 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            E + +A + A+   G++DI+ NNAGI                +  + VNL G+++    
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 132 AAKAM--IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL-GKHGIRV 188
           A   M   +G + G I+   S A +        YS SK  ++G  RS A  L  K G+RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 189 NCISPHGVPSEML---VNAYRKYLGKADMKPEEVC 220
           N I P    + +L   V    + L  A  +  EV 
Sbjct: 181 NAICPGFTNTPLLPDLVAKEAEMLPSAPTQSPEVV 215

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 1e-38
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 15/191 (7%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-IGGRYIHCDVTKEE 74
            G VAV+TGGA G+G AT +     GA +VI D+ +  G  +A      R++  DVT E+
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEK 60

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN------MEDVKFLLSVNLNGILHG 128
           DV++A+ LA +  G+LDI+ N AGI        +        +E  + +++VNL G  + 
Sbjct: 61  DVKAALALAKAKFGRLDIVVNCAGI-AVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNV 119

Query: 129 IKHAAKAM------IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
           I+ AA AM        G+R G II T+S AA  G +   AYS SK  I+G+    A +L 
Sbjct: 120 IRLAAGAMGKNEPDQGGER-GVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLA 178

Query: 183 KHGIRVNCISP 193
             GIRV  I+P
Sbjct: 179 PQGIRVVTIAP 189

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  135 bits (342), Expect = 1e-38
 Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 13/254 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           L  KVA++TGG++GIG A      E G++++  DI +       S     Y   DV+ +E
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP------SYNDVDYFKVDVSNKE 57

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
            V   +   +S  G++DI+ NNAGI  S G+I ++  ++   +++VN+NGI    K+   
Sbjct: 58  QVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP 116

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            M++ Q KG II  +S  +      + AY  SK A++GL RS A +     IR   + P 
Sbjct: 117 YMLK-QDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPG 174

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIEDVAQAALFLASEEAG 253
            + + +L  A    +GK    PE V + +R+ G +    R    E+VA    FLAS+ A 
Sbjct: 175 SIRTPLLEWAAELEVGK---DPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLAS 231

Query: 254 FITAHNLVIDGGYT 267
           FIT   + +DGG  
Sbjct: 232 FITGECVTVDGGLR 245

Length = 258

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  134 bits (340), Expect = 2e-38
 Identities = 86/257 (33%), Positives = 131/257 (50%), Gaps = 22/257 (8%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGRY-------IHCDVT 71
           A ITG A G+G A A+  AE GA + + DI D  G  A A+ I   +          DVT
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            E   ++ +  A    G L ++ NNAG+ GS G+I  + +++ + ++++N+  I  G KH
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A   +   Q   SI+  SS AA        AY+ SK A+  L +S A +  + G+ V C 
Sbjct: 121 ALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 192 SPHGVPSEM---LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           S H  P+ +   +V+   + LG+ +       K+ R    +  GR    +DVA A L+LA
Sbjct: 180 SIH--PTFIRTGIVDPIFQRLGEEEA----TRKLAR---GVPLGRLGEPDDVAHAVLYLA 230

Query: 249 SEEAGFITAHNLVIDGG 265
           S+E+ F+T   LVIDGG
Sbjct: 231 SDESRFVTGAELVIDGG 247

Length = 251

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  134 bits (340), Expect = 2e-38
 Identities = 84/259 (32%), Positives = 131/259 (50%), Gaps = 15/259 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGG---RYIH 67
              KV +ITGG  G+G ATA   A+ GA + + D+    L+   AAL           I 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV+ E  VE+ V   V   G++D  FNNAGI G          ++   ++S+NL G+ +
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G++   K M E Q  G I+ T+S   I G      Y+ +K  ++GL R++A E G++GIR
Sbjct: 121 GLEKVLKVMRE-QGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIR 179

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALF 246
           +N I+P  + + M+  + ++   +    PEE  +       + R G     E+VA    F
Sbjct: 180 INAIAPGAILTPMVEGSLKQLGPE---NPEEAGEEFVSVNPMKRFGEP---EEVAAVVAF 233

Query: 247 LASEEAGFITAHNLVIDGG 265
           L S++AG++ A  + IDGG
Sbjct: 234 LLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 2e-38
 Identities = 87/261 (33%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHC-- 68
           R   KVA++TG A GIG A A+  A  GA +V+ADI  E    +A  I   GG  I    
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGIL 126
           DV+  +  ++     VS  G +D + NNA I G      + ++  +  K  +SVNL+G L
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              +   K M   +R G  I   SS A    L S+ Y L+K  + GL +  A ELG   I
Sbjct: 123 VCTRAVYKHMA--KRGGGAIVNQSSTAAW--LYSNFYGLAKVGLNGLTQQLARELGGMNI 178

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I+P  + +E           +     E V  MV+    +   R  + ED+    LF
Sbjct: 179 RVNAIAPGPIDTEA---------TRTVTPKEFVADMVK---GIPLSRMGTPEDLVGMCLF 226

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L S+EA +IT     +DGG  
Sbjct: 227 LLSDEASWITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  134 bits (338), Expect = 4e-38
 Identities = 88/253 (34%), Positives = 124/253 (49%), Gaps = 5/253 (1%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTK 72
           L GK A+ITG ARGIG A A+ +   GA + IADI  E   A A+ IG     I  DVT 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           +  ++  V   V   G +DI+ NNA +      I  +  E    L ++N++G L  ++  
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNAALFDLA-PIVDITRESYDRLFAINVSGTLFMMQAV 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+AMI   R G II  +S A   G      Y  +K A+I L +S    L +HGI VN I+
Sbjct: 120 ARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIA 179

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V  E       K+    +    E  ++V ++     GR    ED+   A+FLAS +A
Sbjct: 180 PGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPF--GRMGRAEDLTGMAIFLASTDA 237

Query: 253 GFITAHNLVIDGG 265
            +I A    +DGG
Sbjct: 238 DYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  131 bits (332), Expect = 3e-37
 Identities = 65/191 (34%), Positives = 95/191 (49%), Gaps = 5/191 (2%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC--- 68
              L GKVA+ITG + GIG ATA+  AE GA +V+A   +E   ALA  IG         
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT    VE+A+       G++DI+ NNAG++  G  +   +++D   ++  N+ G+L+G
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNG 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +     M+E ++ G II   S A          Y  +K A+   +     EL   GIRV
Sbjct: 120 TRAVLPGMVE-RKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRV 178

Query: 189 NCISPHGVPSE 199
             ISP  V + 
Sbjct: 179 TVISPGLVETT 189

Length = 246

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  130 bits (328), Expect = 1e-36
 Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 25/258 (9%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVI--ADILDELGAALASTI---GGRYI--HCDVTK 72
           A++TGG+RGIG A A   AE GA +VI      D   A +A+ I   GG+ +    DV++
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDA-AAEVAAEIEELGGKAVVVRADVSQ 59

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGIK 130
            +DVE          G+LD++ +NA    +G       +    +   ++ NL  ++H  +
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAA---AGAFRPLSELTPAHWDAKMNTNLKALVHCAQ 116

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            AAK M E +  G I+  SS  +I       A   +K A+  L R  A ELG  GIRVN 
Sbjct: 117 QAAKLMRE-RGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +SP  + ++ L      +  + D+                 GR  + +DVA A  FL S+
Sbjct: 176 VSPGVIDTDAL----AHFPNREDLLEAAAANTP-------AGRVGTPQDVADAVGFLCSD 224

Query: 251 EAGFITAHNLVIDGGYTT 268
            A  IT   LV+DGG + 
Sbjct: 225 AARMITGQTLVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 1e-36
 Identities = 88/257 (34%), Positives = 124/257 (48%), Gaps = 15/257 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDV 70
             L GKVA++TGGA  IGAA A+     GA + I DI  + GAA+A+++G   R+I  D+
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T +  +E AV   V+  G++DI+ N A      G  +S    D    L VNL       +
Sbjct: 62  TDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASS--RADWLAALDVNLVSAAMLAQ 119

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A   +  G   G+I+  +S +A         Y  SK AI  L RS A +L   GIRVN 
Sbjct: 120 AAHPHLARGG--GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNS 177

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +SP    S ++         KAD       ++      L  GR    E+VAQ   FL S+
Sbjct: 178 VSPGWTWSRVMDELSGGDRAKAD-------RVAAPFHLL--GRVGDPEEVAQVVAFLCSD 228

Query: 251 EAGFITAHNLVIDGGYT 267
            A F+T  +  +DGGY+
Sbjct: 229 AASFVTGADYAVDGGYS 245

Length = 261

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  129 bits (325), Expect = 4e-36
 Identities = 93/262 (35%), Positives = 126/262 (48%), Gaps = 20/262 (7%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGRYI-- 66
             L GKV VITGG+ G+G A A  F +  A +VI    DE  A  +A  I   GG  I  
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DVT E DV + ++ AV   G LD+M NNAGI  +  S   +++ED   +++ NL G  
Sbjct: 63  KGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPS-HEMSLEDWNKVINTNLTGAF 121

Query: 127 HGIKHAAKAMIEGQRKGSIICTSS-SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            G + A K  +E   KG+II  SS    I   L  H Y+ SK  +  +  + A E    G
Sbjct: 122 LGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVH-YAASKGGVKLMTETLAMEYAPKG 180

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I P  +     +NA  K+         +V  M+        G     E++A  A 
Sbjct: 181 IRVNNIGPGAI--NTPINA-EKFADPKQRA--DVESMIP------MGYIGKPEEIAAVAA 229

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS EA ++T   L  DGG T
Sbjct: 230 WLASSEASYVTGITLFADGGMT 251

Length = 261

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  128 bits (325), Expect = 4e-36
 Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 29/265 (10%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIG-GRYIHC 68
            L  KV VITGGA+G+G A A+  A+ GA + + D+    L+E  A   +     R    
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-------GSITS-LNMEDVKFLLSV 120
           +VT EEDVE+         GQL+ + NNAGI   G       G +TS +++E  + ++ V
Sbjct: 62  NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           NL G+    + AA  MIE   KG II   SS A  G +    YS SK  +  +  + A E
Sbjct: 122 NLTGVFLCGREAAAKMIESGSKGVII-NISSIARAGNMGQTNYSASKAGVAAMTVTWAKE 180

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           L ++GIRV  I+P  + +EM           A MKPE + ++ +    +  GR    E++
Sbjct: 181 LARYGIRVAAIAPGVIETEMT----------AAMKPEALERLEK---MIPVGRLGEPEEI 227

Query: 241 AQAALFLASEEAGFITAHNLVIDGG 265
           A    F+   E  ++T   L IDGG
Sbjct: 228 AHTVRFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  128 bits (324), Expect = 7e-36
 Identities = 78/258 (30%), Positives = 129/258 (50%), Gaps = 16/258 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIH 67
           R   KV ++TGG+RGIG    + F ENGA +V     +  G AL S +        +++ 
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CDVTKEED+++ + + V   G++D + NNAG      +    + ++ + LL++NL     
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFL 125

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             K+A   +   + +G+II  SS    +G   +  Y  +K AI  + ++ A +  ++G+R
Sbjct: 126 ASKYALPHL--RKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVR 183

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VNCISP  + + +      + L           K    +  L  GR  +  +   AALFL
Sbjct: 184 VNCISPGNIWTPLW-----EELAAQTPDTLATIKEGELAQLL--GRMGTEAESGLAALFL 236

Query: 248 ASEEAGFITAHNLVIDGG 265
           A+ EA F T  +L++ GG
Sbjct: 237 AA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  127 bits (322), Expect = 1e-35
 Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 10/189 (5%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTK 72
           KV +ITG + GIG A A   A  G + VIA     D L+ LG  L   +    +  DVT 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQG-YRVIATARNPDKLESLGELLNDNL--EVLELDVTD 57

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           EE +++AV+  +   G++D++ NNAG    G  +   ++E+V+ L  VN+ G L   +  
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYGLFG-PLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              M + Q  G I+  SS A ++       Y  SK A+  L+ S   EL   GI+V  I 
Sbjct: 117 LPLMRK-QGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIE 175

Query: 193 PHGVPSEML 201
           P  V +   
Sbjct: 176 PGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  125 bits (316), Expect = 8e-35
 Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 36/268 (13%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYI--HCD 69
             K+ +ITG A  IG A  K     GA +++ADI    L++L   L +    R I    D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGILH 127
           +T +E ++  +   +   G++DI+ NNA  S    G        E    +L+VNL G   
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------LASHAYSLSKEAIIGLARST 177
             +   K   + Q KGSII  +S   ++             +   YS+ K  II L +  
Sbjct: 121 CSQAFIKLF-KKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A      GIRVN ISP G+                + +P E  +       L   R  + 
Sbjct: 180 AKYYADTGIRVNAISPGGIL---------------NNQPSEFLEKYTKKCPL--KRMLNP 222

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           ED+  A +FL S+ + ++T  NLVIDGG
Sbjct: 223 EDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 9e-35
 Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 26/264 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----AALASTIGGR--YIH 67
            L G+VA +TG   GIG   A   A+ GA + + D+  + G    A      G R   I 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGI 125
            DVT + D+ +AV    +  G L +  N AGI+ +     +  ME+ ++  ++ +NL G+
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANA---NPAEEMEEEQWQTVMDINLTGV 121

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIM--GGLASHAYSLSKEAIIGLARSTACELGK 183
               +  A+AM+E    GSI+  +S + I+   GL    Y+ SK  +I L++S A E   
Sbjct: 122 FLSCQAEARAMLE-NGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG 180

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIRVN ISP    + M            + +PE V +           R A ++++   
Sbjct: 181 RGIRVNSISPGYTATPM------------NTRPEMVHQTKLFEEQTPMQRMAKVDEMVGP 228

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A+FL S+ A F T  +L++DGG+ 
Sbjct: 229 AVFLLSDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  125 bits (315), Expect = 1e-34
 Identities = 73/233 (31%), Positives = 106/233 (45%), Gaps = 21/233 (9%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGG-----RYIH 67
           GK  +ITGG+ GIG A AK   + GA+++I       L+E    + +          YI 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++  E+VE A   AV   G  D++ N AGIS   G    L  E+ +  + VN  G L+
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS-IPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
                   M E QR G I+  SS AA++G     AY  SK A+ GLA S   EL  + IR
Sbjct: 120 VAHAVLPLMKE-QRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 188 VNCISPHGVPSEMLVNAYR------KYLGKAD--MKPEEVCKMVRDSGSLLRG 232
           V+ + P    +       +      K +  +   + PEE  +++     L RG
Sbjct: 179 VSVVYPPDTDTPGFEEENKTKPEETKAIEGSSGPITPEEAARIIVK--GLDRG 229

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  124 bits (314), Expect = 1e-34
 Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 21/258 (8%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGRY--IHCDVTKEE 74
           +V ++TG +RG+GAA A+ FA  GA +V+        A A+A+  G R   I  DV   +
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGS-----GGSITSLNMEDVKFLLSVNLNGILHGI 129
            V++ +  A +  G +D + NNA I          +  +++ ED +  L   + G L+ +
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLL 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +       E +  G +I   ++      +  H Y+ +K A++G  R+ A ELG +GI VN
Sbjct: 121 QAVLPDFKE-RGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            +S   +               +   P+EV   +  +  L  G+  + +D+A A LF AS
Sbjct: 180 MVSGGLLKVT----------DASAATPKEVFDAIAQTTPL--GKVTTPQDIADAVLFFAS 227

Query: 250 EEAGFITAHNLVIDGGYT 267
             A  +T  NLV+DGG  
Sbjct: 228 PWARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (312), Expect = 2e-34
 Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 22/255 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
              K  +ITG A GIG A A+ F   GA +   D  D+       +    ++  D++  +
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLS--D 56

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
           D+E        W   +DI+ N AGI      +   ++E+ + +   NL       +    
Sbjct: 57  DLEPLF----DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP 112

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            M+E ++ G II   S A+ + G    AY+ SK A+ G  +  A +  K GI+V  I+P 
Sbjct: 113 QMLE-RKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPG 171

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
            V + M   A       AD +P  +   V     +   R A  E+VA+  LFLAS +A +
Sbjct: 172 AVKTPM--TA-------ADFEPGGLADWVARETPI--KRWAEPEEVAELTLFLASGKADY 220

Query: 255 ITAHNLVIDGGYTTG 269
           +    + IDGG+T  
Sbjct: 221 MQGTIVPIDGGWTLK 235

Length = 235

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  123 bits (311), Expect = 3e-34
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 17/255 (6%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
            ++TG A+GIG A A+   + GA ++  D+       L      R    DV     V   
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDL--PFVLLLEYGDPLRLTPLDVADAAAVREV 58

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
               ++  G +D + N AG+    G+   L+ ED +   +VN+ G+ + ++  A  M + 
Sbjct: 59  CSRLLAEHGPIDALVNCAGVL-RPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKD- 116

Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
           +R G+I+  +S+AA +  ++  AY  SK A+  L++    EL  +G+R N +SP    + 
Sbjct: 117 RRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTDTA 176

Query: 200 MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-----GRSASIEDVAQAALFLASEEAGF 254
           M    +    G A        +++       R     G+ A   D+A A LFLAS++AG 
Sbjct: 177 MQRTLWHDEDGAA--------QVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGH 228

Query: 255 ITAHNLVIDGGYTTG 269
           IT H+LV+DGG T G
Sbjct: 229 ITMHDLVVDGGATLG 243

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 3e-34
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 17/266 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           L GK+ ++TGG+ GIG A  K    NGA++V ADI    G         +++  DV+  E
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG--GDGQHENY--QFVPTDVSSAE 62

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISG--------SGGSITSLNMEDVKFLLSVNLNGIL 126
           +V   V   +   G++D + NNAGI+                LN      + ++N  G+ 
Sbjct: 63  EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF 122

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              +  A+ M++ Q  G I+  SS A + G      Y+ +K A+    RS A ELGKH I
Sbjct: 123 LMSQAVARQMVK-QHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNI 181

Query: 187 RVNCISPHGV--PSEMLVNAYRKYLGKA-DMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           RV  ++P G+   + +    Y + L     +  E++      + ++  GRS  + +VA  
Sbjct: 182 RVVGVAP-GILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADL 240

Query: 244 ALFLASEEAGFITAHNLVIDGGYTTG 269
             +L S+ A +IT     I GG T G
Sbjct: 241 VCYLLSDRASYITGVTTNIAGGKTRG 266

Length = 266

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  124 bits (312), Expect = 4e-34
 Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 13/261 (4%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIH--CD 69
           L GK AV+TG A GIG   A   A  GA + IAD+  +   A+A  I   GG+ I    D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT E+ V + +       G +DI+ +NAGI      I + +  D K + +++++G     
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN-PIENYSFADWKKMQAIHVDGAFLTT 123

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           K A K M +  R G +I   S  +        AY  +K  ++GLAR  A E  KH +R +
Sbjct: 124 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 183

Query: 190 CISPHGVPSEML---VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            + P  V + ++   +    K LG ++   EEV K V   G  + G   ++EDVAQ  LF
Sbjct: 184 VVCPGFVRTPLVDKQIPEQAKELGISE---EEVVKKVM-LGKTVDGVFTTVEDVAQTVLF 239

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L+S  +  +T  + V+  G+ 
Sbjct: 240 LSSFPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 25/261 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GG--RY 65
           L  +  +ITGG+ G+G A A   A +GA +++ DI    G A A  +       GG    
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DV       +A+   V   G+LDI+ NNAGI+ +  +   L++E+   ++ VNL+G 
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIA-TDAAFAELSIEEWDDVIDVNLDGF 122

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            +  + A   MI  +R G I+  +S A + G      Y+ SK  +IGL ++ A EL   G
Sbjct: 123 FNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRG 182

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN ++P  + + M  NA            E +   V         R    ++VA    
Sbjct: 183 ITVNAVAPGAINTPMADNA---------APTEHLLNPVP------VQRLGEPDEVAALVA 227

Query: 246 FLASEEAGFITAHNLVIDGGY 266
           FL S+ A ++T   + +DGG+
Sbjct: 228 FLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  122 bits (309), Expect = 8e-34
 Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 8/255 (3%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYI--HCDV 70
             KVA++TG  +GIG A AK   E+G  + I D  +E   A A  +   GG+ I    DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +  + V +AVR  V   G L+++ NNAG+      I ++  E    + ++N+ G++ GI+
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGV-APTTPIETITEEQFDKVYNINVGGVIWGIQ 119

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A +A  +    G II  +S A ++G      YS +K A+ GL ++ A +L   GI VN 
Sbjct: 120 AAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNA 179

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
            +P  V + M+ +   + +G+   KP+E   M + +  +  GR +  EDVA    FLA  
Sbjct: 180 YAPGIVKTPMMFDIAHQ-VGENAGKPDEW-GMEQFAKDITLGRLSEPEDVANCVSFLAGP 237

Query: 251 EAGFITAHNLVIDGG 265
           ++ +IT   +++DGG
Sbjct: 238 DSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 2e-33
 Identities = 87/275 (31%), Positives = 120/275 (43%), Gaps = 27/275 (9%)

Query: 5   DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA----LAST 60
           +  N   S +L GKVA+ITGG  GIG A A LFA+ GA I I   LDE   A        
Sbjct: 34  EAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIV-YLDEHEDANETKQRVE 92

Query: 61  IGGR---YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL 117
             G     I  DV+ E   + AV   V   G+LDI+ NNA       S+  +  E +   
Sbjct: 93  KEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKT 152

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
              N+    H  K A   + +G    +II T S     G      YS +K AI    RS 
Sbjct: 153 FKTNIYSYFHMTKAALPHLKQG---SAIINTGSITGYEGNETLIDYSATKGAIHAFTRSL 209

Query: 178 ACELGKHGIRVNCISPHGV--PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           A  L + GIRVN ++P  +  P           L  +D   E+V +   ++      R  
Sbjct: 210 AQSLVQKGIRVNAVAPGPIWTP-----------LIPSDFDEEKVSQFGSNTP---MQRPG 255

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGT 270
             E++A A +FLAS ++ +IT   L ++GG     
Sbjct: 256 QPEELAPAYVFLASPDSSYITGQMLHVNGGVIVNG 290

Length = 290

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  127 bits (320), Expect = 4e-33
 Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 13/263 (4%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY------- 65
           K L  +VA +TGGA GIG  TA+  A  GAH+V+AD+  E   A+A+ I G++       
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DVT E+ V++A        G +DI+ NNAGI+ S        +++ +  L +   G 
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS-SPFEETTLQEWQLNLDILATGY 528

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
               + A + M E    G+I+  +S  A+  G  + AYS +K A   LAR  A E G +G
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588

Query: 186 IRVNCISPHGV--PSEMLVNAYR-KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           IRVN ++P  V   S +    +R +      +  +E+ +       L   R     D+A+
Sbjct: 589 IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL--KRHIFPADIAE 646

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
           A  FLAS ++   T   + +DGG
Sbjct: 647 AVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  120 bits (303), Expect = 7e-33
 Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-----LASTIGGR--YIHCD 69
           GKVA++TG   GIG   A+  A  GA+IV+    D          LA+  G +  Y   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           ++K   +E  V  A    G +DI+ NNAGI      I     E    ++++NL+ + H  
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHV-APIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           + A   M + Q  G II  +S   ++      AY  +K  ++GL +  A E    G+  N
Sbjct: 121 RLALPHM-KKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I P  V +  LV      L + +  P+E              +  + E +   A+FLAS
Sbjct: 180 AICPGWVLTP-LVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLAS 238

Query: 250 EEAGFITAHNLVIDGGYT 267
           + A  IT   + +DGG+T
Sbjct: 239 DAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  119 bits (300), Expect = 1e-32
 Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 10/218 (4%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALAST-IGGRYIHCD 69
           L GK A+ITG  RGIG A A   A+ G ++ +     + L  +   + +  +       D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V+  E+V +A+    +  G +DI+ NNAGI    G    L+  + + ++ VNL G+ +  
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGI-SKFGKFLELDPAEWEKIIQVNLMGVYYAT 123

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +    +MIE ++ G II  SS+A   G   + AYS SK  ++GL  S   E+ KH IRV 
Sbjct: 124 RAVLPSMIE-RQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182

Query: 190 CISPHGVPSEMLVNAYRKYLGKAD--MKPEEVCKMVRD 225
            ++P  V ++M V+      G  D  M+PE++ + +  
Sbjct: 183 ALTPSTVATDMAVDLGLT-DGNPDKVMQPEDLAEFIVA 219

Length = 239

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  120 bits (302), Expect = 2e-32
 Identities = 87/272 (31%), Positives = 120/272 (44%), Gaps = 27/272 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCD 69
           L GKVAVITGG   +G A AK  A  GA + I D   E   A+ + I   GG    +  D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAG--------------ISGSGGSITSLNMEDVK 115
           V  +E +E A +  +   G  DI+ N AG              +     +   L+ E  +
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
           F+  +NL G L   +  AK M+ G++ G+II  SS  A        AYS +K AI    +
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMV-GRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQ 186

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
             A    K GIRVN I+P G     L    R  L   D    E    +     +  GR  
Sbjct: 187 WLAVHFAKVGIRVNAIAP-GF---FLTEQNRALLFNEDGSLTERANKILAHTPM--GRFG 240

Query: 236 SIEDVAQAALFLASEEA-GFITAHNLVIDGGY 266
             E++    L+LA E+A  F+T   L +DGG+
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272

Length = 278

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 21/255 (8%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADI------LDELGAALASTIGGRYIHCDVT 71
           K+A++TG  RGIG+A A+    +G  ++           D       +    R    DVT
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             E+   A+      +G +DI+ NNAGI+        ++ ++   +++ NLN + +  + 
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRDSV-FKRMSHQEWNDVINTNLNSVFNVTQP 121

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
              AM E Q  G II  SS   + G      YS +K  +IG  ++ A E  ++GI VNCI
Sbjct: 122 LFAAMCE-QGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCI 180

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  + + M            +    EV  +      +   R  + E++A A  FL SE 
Sbjct: 181 APGYIATPM-----------VEQMGPEV--LQSIVNQIPMKRLGTPEEIAAAVAFLVSEA 227

Query: 252 AGFITAHNLVIDGGY 266
           AGFIT   + I+GG 
Sbjct: 228 AGFITGETISINGGL 242

Length = 245

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  118 bits (299), Expect = 5e-32
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 7/190 (3%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
            L GKV  ITGGARGIG ATA+  A  GA + I D+ + L    A+ +G       DVT 
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTD 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
                + +    +  G +D++ NNAG+    G          + +L VN+ G++ G K A
Sbjct: 62  PASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLA 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           A  M+  + +G ++  +S A  +   G+A+  Y  SK A++G   +   EL   G+ V+ 
Sbjct: 121 APRMVP-RGRGHVVNVASLAGKIPVPGMAT--YCASKHAVVGFTDAARLELRGTGVHVSV 177

Query: 191 ISPHGVPSEM 200
           + P  V +E+
Sbjct: 178 VLPSFVNTEL 187

Length = 273

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  118 bits (296), Expect = 5e-32
 Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 18/252 (7%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRY--IHCDVTKE 73
           VA++TGGA GIG A A   A+ GA +VIAD+  E   A+A+ I   GG+   + C+VT E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           +D+E+ V+  VS  G + I+ NNAG  G       +  ED ++   +NL       +  A
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
             M +    G+I+  SS ++    +   AY  SK A+  + R+ A +LG  GIRVN ++P
Sbjct: 121 PHMQKAG-GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             V ++ L +          + PE    M++ +     GR    ED+A AALFL S  + 
Sbjct: 180 GAVKTDALASV---------LTPEIERAMLKHT---PLGRLGEPEDIANAALFLCSPASA 227

Query: 254 FITAHNLVIDGG 265
           +++   L + GG
Sbjct: 228 WVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  117 bits (296), Expect = 6e-32
 Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 16/218 (7%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIH---CDVTKE 73
           + +ITGG  GIG   A  FA+ GA +VI DI ++     A+ +   G  +H   CDV+K 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           E+V  A +      G + I+ NNAG+  SG  +  L  E+++    VN        K   
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 134 KAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACEL---GKHGIRV 188
             M+E +  G I+  +S A ++   GLA   Y  SK A +G   S   EL   GK GI+ 
Sbjct: 120 PDMLE-RNHGHIVTIASVAGLISPAGLA--DYCASKAAAVGFHESLRLELKAYGKPGIKT 176

Query: 189 NCISPHGVPSEMLVN-AYRKYLGKADMKPEEVC-KMVR 224
             + P+ + + M       + L    ++PE V  K+VR
Sbjct: 177 TLVCPYFINTGMFQGVKTPRPLLAPILEPEYVAEKIVR 214

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  117 bits (294), Expect = 1e-31
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 20/261 (7%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYI 66
             + RL GK A+ITG   GIG   A  FA  GA +V++DI  +    +   I   GG+  
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Query: 67  --HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
              CD+T E+++ +    A+S  G++DI+ NNAG  G G     + M D +    +N+  
Sbjct: 64  ACRCDITSEQELSALADFALSKLGKVDILVNNAG--GGGPKPFDMPMADFRRAYELNVFS 121

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
             H  +  A  M E    G I+  +S AA    +   +Y+ SK A   L R+ A +LG+ 
Sbjct: 122 FFHLSQLVAPEM-EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            IRVN I+P  + ++ L         K+ + PE   KM++ +      R    +D+A AA
Sbjct: 181 NIRVNGIAPGAILTDAL---------KSVITPEIEQKMLQHTP---IRRLGQPQDIANAA 228

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           LFL S  A +++   L + GG
Sbjct: 229 LFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 3e-31
 Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 23/260 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA--ALASTIGGR--YIHCD 69
            L GKVA++TGG  G+G   A   A+ GA I+I            L    G +  ++  D
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVD 71

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +TK E  E  V+ A+   G++DI+ NNAG       +     ED   ++ +NLN + H  
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA-PLLEYKDEDWNAVMDINLNSVYHLS 130

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +  AK M + Q  G II  +S  +  GG    AY+ SK  + GL ++ A EL  + I+VN
Sbjct: 131 QAVAKVMAK-QGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVN 189

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAALF 246
            I+P              Y+  A+  P    K  R+   L R   GR    +D+  AA+F
Sbjct: 190 AIAP-------------GYIKTANTAPIRADKN-RNDEILKRIPAGRWGEPDDLMGAAVF 235

Query: 247 LASEEAGFITAHNLVIDGGY 266
           LAS  + ++  H L +DGG+
Sbjct: 236 LASRASDYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  116 bits (291), Expect = 5e-31
 Identities = 84/271 (30%), Positives = 118/271 (43%), Gaps = 26/271 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCD 69
           L  KVAVITGG   +G A A+  A+ GA +       E G  +A  I   GGR   +  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAG-------------ISGSGGSITSLNMEDVKF 116
           V     +E A    V+  G +DI+ N AG                +  +   L+ E  +F
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           +  +NLNG     +   K M+E +  GSII  SS  A        AYS +K A+    + 
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKG-GSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQW 181

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A E    G+RVN I+P    +       RK L   D    +    +   G    GR   
Sbjct: 182 LAVEFATTGVRVNAIAPGFFVTPQ----NRKLLINPDGSYTDRSNKI--LGRTPMGRFGK 235

Query: 237 IEDVAQAALFLASEEA-GFITAHNLVIDGGY 266
            E++  A LFLASE+A  F+T   + +DGG+
Sbjct: 236 PEELLGALLFLASEKASSFVTGVVIPVDGGF 266

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 6e-31
 Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 20/259 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGR--YIHC 68
           L G+VA++TG ARG+G   A+  A  GAH+++    A  L+   AAL +  GG    +  
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAF 67

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D+  EE V +A     +  G+LDI+ NN G +     +  L+   ++ LL  +L   +  
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVG-ARDRRPLAELDDAAIRALLETDLVAPILL 126

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + AA+ M   Q  G II  +S A  +       Y  +K+ + GL R+ A E G HGI  
Sbjct: 127 SRLAAQRMKR-QGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITS 185

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P    +E   NA       A      V   +     L  GR    E++A AA+FLA
Sbjct: 186 NAIAPGYFATE--TNA-------AMAADPAVGPWLAQRTPL--GRWGRPEEIAGAAVFLA 234

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S  A ++  H L +DGGY+
Sbjct: 235 SPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 7e-31
 Identities = 69/255 (27%), Positives = 101/255 (39%), Gaps = 26/255 (10%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALA--STIGGRYIHCDV 70
            L GKV  ITGG  G+G ATA   A  GA + +       L   L        R    D+
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDL 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
              +    AV       G+LD + N AG     G+I   + +    +  VN+   L+  K
Sbjct: 64  VDPQAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A  A+      G I+   + AA+  G    AY+ +K  +  L  + A EL   GI VN 
Sbjct: 123 AALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNA 181

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           + P  + +            +ADM   +              R  + E +A    FL S+
Sbjct: 182 VLPSIIDTPPN---------RADMPDADF------------SRWVTPEQIAAVIAFLLSD 220

Query: 251 EAGFITAHNLVIDGG 265
           EA  IT  ++ +DGG
Sbjct: 221 EAQAITGASIPVDGG 235

Length = 239

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  115 bits (289), Expect = 7e-31
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 27/261 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI--LDELGAALASTIGGRY--IHCDV 70
           L GKVA++TG   G+G   A   AE GA IV A      E    + + +G R+  +  D+
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADL 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSI--TSLNMEDVKFLLSVNLNGILHG 128
           +  E +++ V  AV   G +DI+ NNAGI     +   +  + +DV   ++VNL  +   
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDV---MNVNLKSVFFL 118

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + AAK  ++  R G II  +S  +  GG+   +Y+ SK A+ GL +  A E    GI V
Sbjct: 119 TQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINV 178

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAAL 245
           N I+P           Y        ++ +E     R++  L R   GR  + +D+   A+
Sbjct: 179 NAIAP----------GYMATNNTQALRADED----RNAAILERIPAGRWGTPDDIGGPAV 224

Query: 246 FLASEEAGFITAHNLVIDGGY 266
           FLAS  + ++  + L +DGG+
Sbjct: 225 FLASSASDYVNGYTLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 7e-31
 Identities = 79/255 (30%), Positives = 129/255 (50%), Gaps = 31/255 (12%)

Query: 15  LTGKVAVITGGA-RGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIH-- 67
           L GKV ++T  A  GIG+ATA+   E GA +VI+DI    L E    LA+ +G   +   
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 68  -CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNG 124
            CDVT E  V++ +  AV   G+LD++ NNAG+   GG    ++M D ++  +L V L G
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGL---GGQTPVVDMTDDEWSRVLDVTLTG 131

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA---YSLSKEAIIGLARSTACEL 181
                + A + M      G I+   ++A+++G  A H    Y+ +K  ++ L R +A E 
Sbjct: 132 TFRATRAALRYMRARGHGGVIV---NNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEA 188

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
            ++G+R+N ++P          A   +L K      E+  +   +     GR+A   +VA
Sbjct: 189 AEYGVRINAVAPS--------IAMHPFLAKV--TSAEL--LDELAAREAFGRAAEPWEVA 236

Query: 242 QAALFLASEEAGFIT 256
               FLAS+ + ++T
Sbjct: 237 NVIAFLASDYSSYLT 251

Length = 262

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 9e-31
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 13/192 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCDV 70
           L GKVA+ITGG++GIG A A+     G  + I       L+E  A L +      +  DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
             E DV+ AV   V+  G LD++  NAG+ G    +  L  E+ + ++  NL G  + IK
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAPVEELTPEEWRLVIDTNLTGAFYTIK 122

Query: 131 HAAKAMIEGQRKGSIICTSSSA---AIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            A  A+  G   G II  SS A      GG    AY+ SK  ++G + +   +L ++GI+
Sbjct: 123 AAVPALKRG--GGYIINISSLAGTNFFAGG---AAYNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 188 VNCISPHGVPSE 199
           V+ I P  V + 
Sbjct: 178 VSTIMPGSVATH 189

Length = 237

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 1e-30
 Identities = 83/231 (35%), Positives = 116/231 (50%), Gaps = 27/231 (11%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYI---HCDVTKEEDVES 78
           ITG A GIG ATA LFA  G  +   DI +   AALA+ +G         DVT     ++
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDA 65

Query: 79  AVRLAVSWK-GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
           A+    +   G+LD++FNNAGI   GG    + +E    ++ +N+ G+L+G  HAA   +
Sbjct: 66  ALADFAAATGGRLDVLFNNAGI-LRGGPFEDIPLEAHDRVIDINVKGVLNGA-HAALPYL 123

Query: 138 EGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           +      +I TSS++AI G  GLA   YS +K A+ GL  +   E  +HGIRV  + P  
Sbjct: 124 KATPGARVINTSSASAIYGQPGLAV--YSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181

Query: 196 VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAAL 245
           V + ML           D    EV     D+GS  R G   + EDVA+A  
Sbjct: 182 VDTAML-----------DGTSNEV-----DAGSTKRLGVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 2e-30
 Identities = 82/259 (31%), Positives = 127/259 (49%), Gaps = 17/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTI--GGRY--IHCD 69
           LTGK+A++TG +RGIG A AKL A+ GAH IV +  LD   A   + +  GG+   + C 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           + + E +++         G+LDI+ NNA  +   G I   ++   +  + VN+ G     
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
             A K M E Q  GSI+  +S   +  G     YS++K A+I + ++ A E    GIRVN
Sbjct: 126 VEAGKLMKE-QGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVN 184

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            + P    +        K+   A  K + + K       L   R A   ++A A L+LAS
Sbjct: 185 ALLPGLTDT--------KFAS-ALFKNDAILKQALAHIPL--RRHAEPSEMAGAVLYLAS 233

Query: 250 EEAGFITAHNLVIDGGYTT 268
           + + + T   L +DGGY +
Sbjct: 234 DASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 2e-30
 Identities = 83/258 (32%), Positives = 121/258 (46%), Gaps = 16/258 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-----LGAALASTIGGRYIHCD 69
           L GK+A+ITG + GIG A AK +A+ GA IV  DI  E     L A     I      CD
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM--EDVKFLLSVNLNGILH 127
           VT E+ V++ V       G +DI+ NNAGI      I  L M  ED + ++ ++LN    
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGII---KRIPMLEMSAEDFRQVIDIDLNAPFI 124

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             K    +MI+ +  G II   S  + +G     AY+ +K  +  L ++ A E G+  I+
Sbjct: 125 VSKAVIPSMIK-KGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQ 183

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
            N I P G  +       R+        P +   + +        R    ED+A  A+FL
Sbjct: 184 CNGIGP-GYIATPQTAPLRELQADGSRHPFDQFIIAKTPA----ARWGDPEDLAGPAVFL 238

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS+ + F+  H L +DGG
Sbjct: 239 ASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 2e-30
 Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 7/178 (3%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCDVTKEED 75
           +ITG A G+G A A  +A  G  + +AD+ +E G      +   GG   Y  CDV     
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           + +  +      G +D++ NNAG++ SGG    L++ED  + +++NL G++ G K A   
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCK-AFLP 121

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + + Q+ G I+  +S A +M G A  +Y+++K  ++ L+ +   EL    I V+ + P
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 3e-30
 Identities = 77/260 (29%), Positives = 118/260 (45%), Gaps = 18/260 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHC-- 68
            L  KV ++TGGA GIGAA +   AE GA  VI           A  +     R      
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAEFVQV 62

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI-LH 127
           D+T +     AV   V+  G++D + NNAG++   G    L      F+ S+  N I  +
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG----LEAGREAFVASLERNLIHYY 118

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            + H     ++   +G+I+  SS  A+ G   +  Y+ +K A + L R  A  L K G+R
Sbjct: 119 VMAHYCLPHLK-ASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVR 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +    +P+E++   Y  ++   D  PE     +     L   R  + E++A  A+FL
Sbjct: 178 VNAV----IPAEVMTPLYENWIATFD-DPEAKLAAITAKIPLGH-RMTTAEEIADTAVFL 231

Query: 248 ASEEAGFITAHNLVIDGGYT 267
            SE +   T   L +DGGY 
Sbjct: 232 LSERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 3e-30
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRY--IHCDVTK 72
           T + A++TG A GIG A A+ F   G  ++  DI     AA A  +G  R+  + CD+T 
Sbjct: 1   TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              + +A+  A + +G +D++  NAG +    S+        +   ++NL      ++  
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAG-AARAASLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            + M++  R G+++   S    M  L   AYS +K  +I   +  A E G+ GIR N ++
Sbjct: 120 LEGMLKRSR-GAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V +       + +  +    P +V + ++    L     A+ +DVA A LFLAS  A
Sbjct: 178 PGTVKT-------QAWEARVAANP-QVFEELKKWYPL--QDFATPDDVANAVLFLASPAA 227

Query: 253 GFITAHNLVIDGGYTTGTSSMS 274
             IT   L +DGG T G   M+
Sbjct: 228 RAITGVCLPVDGGLTAGNREMA 249

Length = 257

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  113 bits (285), Expect = 4e-30
 Identities = 83/264 (31%), Positives = 118/264 (44%), Gaps = 23/264 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVT 71
            L G+VA+ITGG  G+G A  + F   GA + + D   E  A L +  G     +  DV 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVR 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNME--DVKF--LLSVNLNGILH 127
              D E AV   V   G+LD    NAGI     S+  +  E  D  F  L  +N+ G + 
Sbjct: 61  SLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYIL 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G K A  A+     +GS+I T S+A    G     Y+ SK A++GL +  A EL  H IR
Sbjct: 121 GAKAALPALYAT--EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IR 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-----GRSASIEDVAQ 242
           VN ++P G+ +++         G A +   E          +L+     G +   ED   
Sbjct: 178 VNGVAPGGMVTDL--------RGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTG 229

Query: 243 AALFLAS-EEAGFITAHNLVIDGG 265
           A +FLAS  +    T   +  DGG
Sbjct: 230 AYVFLASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 4e-30
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 25/261 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAAL-ASTIGGRYIH 67
            RL GK A+ITGG  GIG  TA+ F   GA + I       L+   A L  S +  R   
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV  ++ +  A+  A    G+LD +F NAG++     +   +        + N+ G   
Sbjct: 62  GDVAAQKALAQALAEAF---GRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYF 117

Query: 128 GIKHAAKAMIEGQRKGS--IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            I    +A++      +  ++  S +A I G   S  Y+ SK A++ LA++ + EL   G
Sbjct: 118 LI----QALLPLLANPASIVLNGSINAHI-GMPNSSVYAASKAALLSLAKTLSGELLPRG 172

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAA 244
           IRVN +SP  V + +         GK  +    +  +     +L+  GR  + E++A+A 
Sbjct: 173 IRVNAVSPGPVQTPL--------YGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAV 224

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           L+LAS+E+ FI    +++DGG
Sbjct: 225 LYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  112 bits (282), Expect = 6e-30
 Identities = 79/258 (30%), Positives = 123/258 (47%), Gaps = 14/258 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCD 69
           L  K A++TGG  GIG AT + FAE GA + + D+  E    +A+ I   GG      CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +T  + V++AV  A    G +D++ NNAG     G  T       + L+++NL G LH  
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
                 M+E +  G I+  +S AA +G      Y+  K  ++  +++ A E  +HGI VN
Sbjct: 120 HAVLPGMVE-RGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            + P G     L++         +   E   +      ++  GR    +D+  A LF +S
Sbjct: 179 VVCP-GPTDTALLDDICGGAENPEKLREAFTR------AIPLGRLGQPDDLPGAILFFSS 231

Query: 250 EEAGFITAHNLVIDGGYT 267
           ++A FIT   L + GG T
Sbjct: 232 DDASFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  113 bits (284), Expect = 7e-30
 Identities = 80/266 (30%), Positives = 120/266 (45%), Gaps = 32/266 (12%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-----LASTIGGRY- 65
           S +L GK A+ITGG  GIG A A  FA  GA + I  + +E   A     L    G +  
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80

Query: 66  -IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            I  D+  E      V+  V   G+LDI+ NNA       SI  +  E ++     N+  
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           + +  K A   + +G    SII T+S  A  G      Y+ +K AI+   R  + +L + 
Sbjct: 141 MFYLTKAALPHLKKG---SSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 185 GIRVNCISPHGV-----PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           GIRVN ++P  +     PS                 PEE  K+      +  GR+    +
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSF---------------PEE--KVSEFGSQVPMGRAGQPAE 240

Query: 240 VAQAALFLASEEAGFITAHNLVIDGG 265
           VA A +FLAS+++ ++T   L ++GG
Sbjct: 241 VAPAYVFLASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 9e-30
 Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 11/257 (4%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIH--C 68
           L GKV V++G   G+G   A   A  GA +V+A    + LDE+ A +    G R +    
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPT 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D+T E+   + V LA+   G++D + NNA    S   +   +    + ++ +N+ G L  
Sbjct: 62  DITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +    A+ E    GSI+  +S           AY ++K A++  ++S A ELG  GIRV
Sbjct: 122 TQAFTPALAE--SGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRV 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  +  + L   +R   GK  +  E++      +  L   R  + ++VA A LFLA
Sbjct: 180 NSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL--KRLPTDDEVASAVLFLA 237

Query: 249 SEEAGFITAHNLVIDGG 265
           S+ A  IT   L ++ G
Sbjct: 238 SDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  112 bits (281), Expect = 1e-29
 Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 20/256 (7%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGR--YIHCDVT 71
           +VA++T    GIG A A L A+ G  I I    DE GA        + G R      D++
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
              +   A+   +   G++D++ NNAG + +      ++ ++ + + +V+++G     + 
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAG-AMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           AA+ M++  + G II  +S         + AY+ +K A+ GL ++ A EL +HGI VN +
Sbjct: 122 AARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAV 181

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  + + M             M   +V    R    L  GR     ++A    +L SE 
Sbjct: 182 APGAIATPM-----------NGMDDSDVKPDSRPGIPL--GRPGDTHEIASLVAWLCSEG 228

Query: 252 AGFITAHNLVIDGGYT 267
           A + T  +L++DGG+ 
Sbjct: 229 ASYTTGQSLIVDGGFM 244

Length = 256

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 1e-29
 Identities = 71/238 (29%), Positives = 103/238 (43%), Gaps = 25/238 (10%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIH-CDVT 71
           GKV +ITG + GIG A A   A  GA +V+A      L  L   LA   G   +   DV+
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG--SITSLN-MEDVKFLLSVNLNGILHG 128
             E  E  +  AV+  G +DI+ NNAGI+       +T L+  E V   + VN  G ++ 
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERV---MRVNYLGAVYC 117

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
              A   +     +G I+  SS A + G      Y+ SK A+ G   S   EL   G+ V
Sbjct: 118 THAALPHLK--ASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAV 175

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
             + P  V +++   A        D KP      +  S  +   +  S E+ A+A L 
Sbjct: 176 TVVCPGFVATDIRKRAL-----DGDGKP------LGKSP-MQESKIMSAEECAEAILP 221

Length = 263

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 2e-29
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVT 71
            L G+VA+ITGG  GIG A  + F   GA + + +   E  A+L    G     +  DVT
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVT 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNME--DVKF--LLSVNLNGILH 127
              D + AV   V   G+LD    NAGI     S+  +  E  D  F  + +VN+ G L 
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLL 122

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G K A  A+      GS+I T S+++   G     Y+ SK A++GL R  A EL    IR
Sbjct: 123 GAKAALPALK--ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IR 179

Query: 188 VNCISPHGVPSEMLVNAYR--KYLGKADMKPEEVCKMVRDSGSLL-RGRSASIEDVAQAA 244
           VN ++P G  +++     R    LG+ +    +   +     ++     +   ED     
Sbjct: 180 VNGVAPGGTVTDL-----RGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY 234

Query: 245 LFLAS-EEAGFITAHNLVIDGG 265
           + LAS   +  +T   +  DGG
Sbjct: 235 VLLASRRNSRALTGVVINADGG 256

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 19/252 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI-----GGRYIH 67
           RL GKVA++TGG +G+GAA A+ FAE GA  +VI     E G A A+ +        ++ 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++  ED    V  A    G+LD + N AG++   G+I   + E      +VN+     
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFF 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGG---LASHAYSLSKEAIIGLARSTACELGKH 184
            ++ A K M   + +G+I+   S +A  GG   LA  AY  SK A+  L R+ A  L ++
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMSA-HGGQPFLA--AYCASKGALATLTRNAAYALLRN 178

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            IRVN ++   + +E      R++ G  D   E+         +   GR    ++VA+A 
Sbjct: 179 RIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA------TQPFGRLLDPDEVARAV 232

Query: 245 LFLASEEAGFIT 256
            FL S+E+G +T
Sbjct: 233 AFLLSDESGLMT 244

Length = 260

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  116 bits (292), Expect = 2e-29
 Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA----LASTIGGR-Y 65
                +GK+ V+TG   GIG  TA  FA  GA +V +DI DE  A     L    G   +
Sbjct: 309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI-DEAAAERTAELIRAAGAVAH 367

Query: 66  IH-CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DV+  + +E+      +  G  DI+ NNAGI G  G     + ED   +L VNL G
Sbjct: 368 AYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI-GMAGGFLDTSAEDWDRVLDVNLWG 426

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           ++HG +   + M+E    G I+  +S+AA     +  AY+ SK A++ L+     EL   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GI V  I P G     +V   R     A    E+  +    +  L + R    E VA+A 
Sbjct: 487 GIGVTAICP-GFVDTNIVATTR----FAGADAEDEARRRGRADKLYQRRGYGPEKVAKAI 541

Query: 245 L 245
           +
Sbjct: 542 V 542

Length = 582

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 5e-29
 Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 24/259 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRYI--H 67
           L+ KVA++TG +RGIGAA A+  A +G  + +     A   DEL A + +  GGR I   
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQ 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV     V      A +  G++D++ NNAG+    G+I   ++ED    ++ NL G   
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPL-GTIADFDLEDFDRTIATNLRGAFV 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++ AA+ + +G   G II  S+S   +       Y+ SK A+ GL    A EL   GI 
Sbjct: 121 VLREAARHLGQG---GRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGIT 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN ++P  V +E+  N      GK+    E++ ++   +G     R  + E++A A  FL
Sbjct: 178 VNAVAPGPVATELFFN------GKS---AEQIDQL---AGLAPLERLGTPEEIAAAVAFL 225

Query: 248 ASEEAGFITAHNLVIDGGY 266
           A  +  ++    L ++GG+
Sbjct: 226 AGPDGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  109 bits (276), Expect = 7e-29
 Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 24/265 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDV 70
              L GK A++TGG +GIGAAT     E GA +V         +       G  ++  D+
Sbjct: 4   FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT-----ARSRPDDLPEGVEFVAADL 58

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGIS-GSGGSITSLNMED------VKFLLSVNLN 123
           T  E   +  R  +   G +DI+ +  G S    G   +L  E+      +  L +V L+
Sbjct: 59  TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLD 118

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLASHAYSLSKEAIIGLARSTACELG 182
             L         MI  +  G II  +S    +    ++ AY+ +K A+   ++S + E+ 
Sbjct: 119 RAL------LPGMIA-RGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA 171

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVCKMVRDS-GSLLRGRSASIEDV 240
             G+RVN +SP  + +E  V A  + L + A    E   +++ DS G +  GR A  E+V
Sbjct: 172 PKGVRVNTVSPGWIETEAAV-ALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEV 230

Query: 241 AQAALFLASEEAGFITAHNLVIDGG 265
           A+   FLAS+ A  IT    VIDGG
Sbjct: 231 AELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (275), Expect = 8e-29
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 22/263 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGRYI--HCDV 70
           +++ +  ++TGG+RG+GAA A+ FA  GA +V+     E  A ALA  +G R I    DV
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADV 61

Query: 71  TKEEDVESAVRLAVSWKGQ-LDIMFNNAGISGS-----GGSITSLNMEDVKFLLSVNLNG 124
           T  E V++    A    G+ +  + NNA    S           +  ED +  L  ++ G
Sbjct: 62  TDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKG 121

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            L+ I+ A   M E Q  G II   ++      +  H Y+ +K A++GL R+ A ELG +
Sbjct: 122 ALNTIQAALPGMRE-QGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPY 180

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GI VN +S              +    +   P+EV  ++  +  L   +  + ++ A A 
Sbjct: 181 GITVNMVS----------GGLLRTTDASAATPDEVFDLIAATTPL--RKVTTPQEFADAV 228

Query: 245 LFLASEEAGFITAHNLVIDGGYT 267
           LF AS  A  +T  NLV+DGG  
Sbjct: 229 LFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  109 bits (274), Expect = 9e-29
 Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 33/267 (12%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI------------ADILDELGA-ALAST 60
             +GKVA++TG +RGIG A A   AE G  I +            A+ ++ LG  ALA  
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALA-- 58

Query: 61  IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSV 120
                +  +V   E ++          G+LD+  NNA  SG       L      + +++
Sbjct: 59  -----VKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRPAMELEESHWDWTMNI 112

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           N   +L   + AAK M +    G II  SS  +I          +SK A+  L R  A E
Sbjct: 113 NAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVE 171

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           L   GI VN +S   V ++ L     K+    +   E+             GR    EDV
Sbjct: 172 LAPKGIAVNAVSGGAVDTDAL-----KHFPNREELLEDARA------KTPAGRMVEPEDV 220

Query: 241 AQAALFLASEEAGFITAHNLVIDGGYT 267
           A A LFL S EA  I    +++DGG +
Sbjct: 221 ANAVLFLCSPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 1e-28
 Identities = 79/258 (30%), Positives = 117/258 (45%), Gaps = 30/258 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR---YIHCDVT 71
           LTG+V ++TGG RGIGA  A+ F   GA +V+       G     T+ GR   +   DV 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHAADVR 57

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNME-DVKFLLSV---NLNGILH 127
             + V + V   V   G+LD++ NNA     GGS  +L  E   +F   +   NL   L 
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNA-----GGSPYALAAEASPRFHEKIVELNLLAPLL 112

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A   M +    GSI+   S +       + AY  +K  ++ L RS A E     +R
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VR 171

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +    V +E     Y    G A +           + ++  GR A+  D+A A LFL
Sbjct: 172 VNAVVVGLVRTEQSELHYGDAEGIAAV-----------AATVPLGRLATPADIAWACLFL 220

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS+ A +++  NL + GG
Sbjct: 221 ASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  112 bits (282), Expect = 3e-28
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 35/253 (13%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI---LDELGAALASTIGGRYIHCDVT 71
           L GKVA++TG ARGIGAA A++ A +GAH+V  D+    + L AA+A+ +GG  +  D+T
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTALALDIT 266

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGI 129
             +             G LDI+ +NAGI+      T  NM++ ++  +L+VNL   L   
Sbjct: 267 APDAPARIAEHLAERHGGLDIVVHNAGITRDK---TLANMDEARWDSVLAVNLLAPLRIT 323

Query: 130 KH--AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           +   AA A+ +G   G I+  SS + I G      Y+ SK  +IGL ++ A  L + GI 
Sbjct: 324 EALLAAGALGDG---GRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGIT 380

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG----SLLRGRSASIEDVAQA 243
           +N ++P  + ++M           A +         R++G    SL +G      DVA+ 
Sbjct: 381 INAVAPGFIETQM----------TAAIPF-----ATREAGRRMNSLQQGGLP--VDVAET 423

Query: 244 ALFLASEEAGFIT 256
             +LAS  +G +T
Sbjct: 424 IAWLASPASGGVT 436

Length = 450

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  108 bits (271), Expect = 3e-28
 Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 17/253 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIV-IADILDELGAALASTIGGRYIHCDVTKE 73
             GK A++TG  +GIG AT K  A+ GA +V ++    +L + +    G   +  D++  
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDW 64

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           +    A   A+   G +D++ NNA ++        +  E       VN+  ++H  +  A
Sbjct: 65  D----ATEEALGSVGPVDLLVNNAAVA-ILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVA 119

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + MI     GSI+  SS A+         Y  +K A+  L +  A ELG H IRVN ++P
Sbjct: 120 RGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP 179

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             V ++M         G+ +    E  K + +   L  G+ A +EDV  A LFL S+++ 
Sbjct: 180 TVVMTDM---------GRDNWSDPEKAKKMLNRIPL--GKFAEVEDVVNAILFLLSDKSS 228

Query: 254 FITAHNLVIDGGY 266
             T   L +DGG+
Sbjct: 229 MTTGSTLPVDGGF 241

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 6e-28
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 19/259 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAAL----ASTIGG--RYIH 67
              +  ++TGG  GIG   A      GA ++I     D+L AA     A    G  RY  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DVT E+ V  AV  A +W G+L  + + AG S + G IT ++ +  +  + +N+NG ++
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            +KHAA+ ++ G   GS +  SS AA        AY ++K A+  L +  A ELG   +R
Sbjct: 125 VLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVR 183

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN I P  + ++++             +  E+    R    L   R   +EDVA  A+FL
Sbjct: 184 VNSIRPGLIRTDLVA---------PITESPELSADYRACTPL--PRVGEVEDVANLAMFL 232

Query: 248 ASEEAGFITAHNLVIDGGY 266
            S+ A +IT   + +DGG+
Sbjct: 233 LSDAASWITGQVINVDGGH 251

Length = 276

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  107 bits (270), Expect = 6e-28
 Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 20/237 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
           L GKV +ITG + GIG   A   A  GA +V++    + L+E+ +            +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D++  ED E  V  A+   G LDI+ NNAGIS         +++  + ++ VN  G +  
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGIS-MRSLFHDTSIDVDRKIMEVNYFGPVAL 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K A   +IE + +GSI+  SS A  +G     AY+ SK A+ G   S   EL +  I V
Sbjct: 120 TKAALPHLIE-RSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISV 178

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
             + P  + + + +NA        D            +G        S E+ A   L
Sbjct: 179 TVVCPGLIDTNIAMNAL-----SGDGSMSAKMDDTTANGM-------SPEECALEIL 223

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 6e-28
 Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIH-- 67
           RL  +VAV+TG  RG+GAA A  FAE GA ++IA      LDE+   + +   GR  H  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVV 64

Query: 68  -CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             D+   E        AV   G+LDI+ NN G +     +++   +D+    + N+    
Sbjct: 65  AADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTST-KDLADAFTFNVATAH 123

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
                A   M+E    GS+I  SS+   + G    AY  +K A+    R  A +L    I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-I 182

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I+P  +    L +A        +++         +  + LR R    ED+A AA++
Sbjct: 183 RVNAIAPGSI----LTSALEVVAANDELRAP------MEKATPLR-RLGDPEDIAAAAVY 231

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS    ++T   L +DGG T
Sbjct: 232 LASPAGSYLTGKTLEVDGGLT 252

Length = 263

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  107 bits (270), Expect = 7e-28
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGR--YIHC 68
           + GK A+ITG + GIGA  AK  A  G ++++     D L+ L   L    G     I  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D++  E +E          G +D++ NNAG  G+ G    L++++ + ++ +N+  +   
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELSLDEEEEMIQLNILALTRL 122

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K     M+E +  G II   S+A ++       YS +K  ++  + +   EL   G++V
Sbjct: 123 TKAVLPGMVE-RGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 189 NCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMV 223
             + P    +E       + Y    G+  + PE+V +  
Sbjct: 182 TAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAA 220

Length = 265

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score =  105 bits (265), Expect = 1e-27
 Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 12/211 (5%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC---DVTKEEDVES 78
           ITG A GIG  TA LFA NG  + + DI ++  AALA+ +G   +     DVT      +
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAA 64

Query: 79  AV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
           A+   A +  G+LD +FNNAG+ G GG    + +     ++ +N+ G+L+G  +AA   +
Sbjct: 65  ALADFAAATGGRLDALFNNAGV-GRGGPFEDVPLAAHDRMVDINVKGVLNGA-YAALPYL 122

Query: 138 EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVP 197
           +      +I T+SS+AI G      YS +K A+ GL  +   E  +HGIRV  + P  V 
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182

Query: 198 SEML-----VNAYRKYLGKADMKPEEVCKMV 223
           + +L       A +K LG+  +   +V K+V
Sbjct: 183 TPILTKGETGAAPKKGLGRV-LPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 28/261 (10%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI---------ADILDELGAALASTIGGR 64
           +L GKVA++TGGA+GIG A     A+ GA +VI          ++++ELG          
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYA-- 60

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DV+K ED    V  AV+  G++DI+ NNAGI+    +   LN ED + ++ VNL+ 
Sbjct: 61  -VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVNLSS 118

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           + +        + E + +G II  SS     GG     YS +K  ++G  +S A EL K 
Sbjct: 119 VFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKT 177

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            + VN I P  + +EM+              PEEV + +     + + R    +++A+  
Sbjct: 178 NVTVNAICPGFIDTEMVAEV-----------PEEVRQKI--VAKIPKKRFGQADEIAKGV 224

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           ++L  + A +IT   L I+GG
Sbjct: 225 VYLCRDGA-YITGQQLNINGG 244

Length = 247

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  103 bits (260), Expect = 1e-26
 Identities = 76/256 (29%), Positives = 105/256 (41%), Gaps = 31/256 (12%)

Query: 24  GGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGRYIHCDVTKEEDVESA 79
                I  A AK  AE GA +V+      L       LA  +    I  DVT +ED++  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIPLDVTSDEDIDEL 62

Query: 80  VRLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
                   G++D + ++  +S     G      + E     L ++    +   K A   M
Sbjct: 63  FEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLM 122

Query: 137 IEGQRKGSIICTSSSAAI-----MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
            EG   GSI+  S  AA       GG       ++K A+  LAR  A ELG+ GIRVN I
Sbjct: 123 NEG---GSIVALSYIAAERVFPGYGG-----MGVAKAALESLARYLAYELGRKGIRVNTI 174

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           S     +     A     G   M   E  +          GR+AS E+VA AA FL S+ 
Sbjct: 175 SAGPTKT----TAGSGIGGFDKM--VEYAE-----EMAPLGRNASAEEVANAAAFLLSDL 223

Query: 252 AGFITAHNLVIDGGYT 267
           A  IT   L +DGG++
Sbjct: 224 ARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  104 bits (260), Expect = 1e-26
 Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 22/260 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRY-IHCD 69
           L GK A+ITG + GIG   A  + E GA + IA    D L++L   + ++ G    + CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V++ + V S +    +  G +DI   NAGI  +   +  + +E+ + L + N+ G+    
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA--YSLSKEAIIGLARSTACELGKHGIR 187
           + AAKAM++  + G II T+S +  +  +      Y  SK A+I L ++ A EL  H IR
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIR 185

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +SP  + +E LV  Y +Y  +   +P+           +  GR    E++A   L+L
Sbjct: 186 VNSVSPGYILTE-LVEPYTEY--QPLWEPK-----------IPLGRLGRPEELAGLYLYL 231

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           ASE + ++T  ++VIDGGYT
Sbjct: 232 ASEASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 22/253 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGRYIHCDVTKE 73
            TGK  ++ GG+RGIGAA  + F  +GA++        +    LA   G   +  D    
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADR 63

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           + V   VR +    G LDI+  NAGI+  G ++  L+ +D+  L  +N++   H    AA
Sbjct: 64  DAVIDVVRKS----GALDILVVNAGIAVFGDALE-LDADDIDRLFKINIHAPYHASVEAA 118

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + M EG R   I   +     + G+A  AY+ SK A+ G+AR  A + G  GI +N + P
Sbjct: 119 RQMPEGGRIIIIGSVNGDRMPVAGMA--AYAASKSALQGMARGLARDFGPRGITINVVQP 176

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             + +              D  P            +   R    E+VA    +LA  EA 
Sbjct: 177 GPIDT--------------DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEAS 222

Query: 254 FITAHNLVIDGGY 266
           F+T     IDG +
Sbjct: 223 FVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 2e-26
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 7/179 (3%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIHCD 69
            L GKV V+TG ARGIGA  A+     GA + + D+    L  L A L        +  D
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT    +++A   AV   G +D++  NAGI+ SGGS+  ++ +  + ++ VNL G+ H +
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTV 124

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           +    A+IE  R+G ++  SS AA        AY  SK  +   A +   E+  HG+ V
Sbjct: 125 RATLPALIE--RRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181

Length = 296

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  103 bits (258), Expect = 2e-26
 Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIH---- 67
              L  KVA++T    GIG A A+  A++GAH+V++    +      +T+ G  +     
Sbjct: 5   RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGT 64

Query: 68  -CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            C V K ED E  V  AV+  G +DI+ +NA ++   G+I     E    +L VN+    
Sbjct: 65  VCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATA 124

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              K     M E +  GS++  SS AA         Y++SK A++GL ++ A EL    I
Sbjct: 125 LMTKAVVPEM-EKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNI 183

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVNC++P      ++  ++   L       E + + +R        R    ED A    F
Sbjct: 184 RVNCLAPG-----LIKTSFSSALWMDKAVEESMKETLRIR------RLGQPEDCAGIVSF 232

Query: 247 LASEEAGFITAHNLVIDGG 265
           L SE+A +IT   +V+ GG
Sbjct: 233 LCSEDASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  103 bits (257), Expect = 3e-26
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 18/254 (7%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEE 74
           G+VA++TG ARGIG   A      G  +V+AD+  E G+ +A  +G    +I  DV  E 
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEA 69

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGS-ITSLNMEDVKFLLSVNLNGILHGIKHAA 133
            V + V   +   G+LD +  NA I+    + + SL++     +L+VNL G +   KH A
Sbjct: 70  QVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCA 129

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
              +     G+I+  +S+ A      + AY+ SK  ++ L  + A  LG   IRVN +SP
Sbjct: 130 -PYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNAVSP 186

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             + +        + L +AD                  GR  ++EDVA    +L S +AG
Sbjct: 187 GWIDARDPSQRRAEPLSEADHAQHPA------------GRVGTVEDVAAMVAWLLSRQAG 234

Query: 254 FITAHNLVIDGGYT 267
           F+T    V+DGG T
Sbjct: 235 FVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  102 bits (257), Expect = 3e-26
 Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 17/261 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-----YIHC 68
           R  GKV V+TG A+GIG   A+  A  GA +++ D   EL   + + I            
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR-SELVHEVLAEILAAGDAAHVHTA 59

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D+      +  VR AV   G++D++ NN G +           E ++  +  +L   L  
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +     M+E +++G I+  SS A    G+    YS +K  +  L  S A E  + GIRV
Sbjct: 120 CRAVLPHMLE-RQQGVIVNVSSIAT--RGIYRIPYSAAKGGVNALTASLAFEHARDGIRV 176

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR----DSGSLLRGRSASIEDVAQAA 244
           N ++P G  +       +     A M  +E     R       S L GR  +I++  +A 
Sbjct: 177 NAVAPGGTEAP----PRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAI 232

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           LFLAS+EA +IT   L + GG
Sbjct: 233 LFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  102 bits (257), Expect = 4e-26
 Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 53/280 (18%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY-------IH 67
           L GK  +ITG    IG+A  K   E G  ++ ADI  E    L  ++G  +       + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGI 125
            D+T +E +E  +  +    G++D   N A       G     ++++D    LS++L   
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSS 121

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA---SH----------AYSLSKEAIIG 172
               +  AK   + Q  G+++  SS   I G +A                Y+  K  II 
Sbjct: 122 FLFSQQFAK-YFKKQGGGNLVNISS---IYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIH 177

Query: 173 LARSTACELGKHGIRVNCISPHGV----PSEMLVNAYRKY-LGKADMKPEEVCKMVRDSG 227
           L +  A       IRVNC+SP G+    P   L NAY+K   GK  + P+++C      G
Sbjct: 178 LTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL-NAYKKCCNGKGMLDPDDIC------G 230

Query: 228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           +L               +FL S+++ +IT  N+++D G++
Sbjct: 231 TL---------------VFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  102 bits (256), Expect = 4e-26
 Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 39/270 (14%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA--------DILDELGAALASTIGGRY 65
            L GK A++TGG +GIG A  +  A  GA +           + L E         G   
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEG--- 59

Query: 66  IHCDVTKEEDVESAVR-LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
             CDV+   + +  +  +A  + G+L+I+ NNAG +    +      ED   ++S N   
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAK-DYTEEDYSLIMSTNFEA 118

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
             H +   A  +++    G+I+  SS A ++   +   Y  +K A+  L RS ACE  K 
Sbjct: 119 AYH-LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKD 177

Query: 185 GIRVNCISPHGVPSEMLVNA-------YRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
            IRVN ++P  V +  LV           K + +  +K                 R    
Sbjct: 178 NIRVNAVAP-WVIATPLVEPVIQQKENLDKVIERTPLK-----------------RFGEP 219

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           E+VA    FL    A +IT   + +DGG T
Sbjct: 220 EEVAALVAFLCMPAASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 8e-26
 Identities = 88/266 (33%), Positives = 125/266 (46%), Gaps = 39/266 (14%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGR--YIHCDV 70
            KV +ITGG+ G+G A AK FAE GA++VI     + L+E    +     G+   +  DV
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE-QFPGQVLTVQMDV 59

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN--------- 121
              EDV+  V       G++D + NNA    +G  I     ED    LSVN         
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNA----AGNFICP--AED----LSVNGWNSVIDIV 109

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS-KEAIIGLARSTACE 180
           LNG  +  +   K  IE   KG+II   ++ A   G     +S + K  ++ + R+ A E
Sbjct: 110 LNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-PGVIHSAAAKAGVLAMTRTLAVE 168

Query: 181 LG-KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
            G K+GIRVN I+P   P E    A + +        EE  K    S  L  GR  + E+
Sbjct: 169 WGRKYGIRVNAIAPG--PIERTGGADKLWES------EEAAKRTIQSVPL--GRLGTPEE 218

Query: 240 VAQAALFLASEEAGFITAHNLVIDGG 265
           +A  A FL S+EA +I    + +DGG
Sbjct: 219 IAGLAYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  102 bits (256), Expect = 9e-26
 Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 25/204 (12%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL--------DELGAALASTIGGR 64
           K   GKVAVITG A G G A A++ A  G  +V+AD+          EL A  A  +G R
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
               DV+    VE+    A+   G + ++FNNAG+ G+GG +   ++ D +++L VNL G
Sbjct: 62  ---TDVSDAAQVEALADAALERFGAVHLLFNNAGV-GAGGLVWENSLADWEWVLGVNLWG 117

Query: 125 ILHGIKHAAKAMIEGQRK-----GSIICTSSSAAIMGGLASHA---YSLSKEAIIGLARS 176
           ++HG++     M+    K     G I+ T+S A   G LA  A   Y++SK A++ L  +
Sbjct: 118 VIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA---GLLAPPAMGIYNVSKHAVVSLTET 174

Query: 177 TACELGKHGIRVNC--ISPHGVPS 198
              +L     +V    + P+ VP+
Sbjct: 175 LYQDLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 76/262 (29%), Positives = 114/262 (43%), Gaps = 32/262 (12%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI---------ADILDELGAALASTIGGRY 65
           L  KV V+TG  RGIG A A   A+ G+ +V+          + L  +       IG   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--- 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMED--VKFLLSVNLN 123
           +  DV+  E  E+  +  +   G  DI+ NNAG+   G     LN++D  +   +S +  
Sbjct: 61  VLADVSTREGCETLAKATIDRYGVADILVNNAGL---GLFSPFLNVDDKLIDKHISTDFK 117

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
            +++  +  AK M EG   G+I+  +S A I        Y   K A+I L +  A EL  
Sbjct: 118 SVIYCSQELAKEMREG---GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             IRVN I+P G     L  +  K LG   M  +E  +     G +L       E+VA+ 
Sbjct: 175 K-IRVNAIAP-GFVKTKLGESLFKVLG---MSEKEFAEKFTLMGKIL-----DPEEVAEF 224

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
              +   E+  IT    V+D G
Sbjct: 225 VAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  101 bits (252), Expect = 1e-25
 Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
           L GKVA++TG + GIG ATA+  A  GA + IA    D L+ L   L +  GG+   +  
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE-GGKALVLEL 59

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT E+ V++AV   V   G+LDI+ NNAGI    G +   +  D   ++  NL G+++ 
Sbjct: 60  DVTDEQQVDAAVERTVEALGRLDILVNNAGI-MLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
             HAA      + KG+I+  SS A  +    S  Y+ +K  +   +     E+ + G+RV
Sbjct: 119 T-HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 189 NCISPHGVPSEM 200
             I P  V +E+
Sbjct: 178 VVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  101 bits (252), Expect = 2e-25
 Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 15/257 (5%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI--------ADILDELGAALASTIGGRYIHCD 69
           +VA++TG   GIG A A+   + G  + +        A  + EL  A     G     CD
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRT---CD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V    ++E+ V  AV+  G +D++ NNAG SG GG+   L  E    ++  NL G+    
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAGRSG-GGATAELADELWLDVVETNLTGVFRVT 119

Query: 130 KHAAKAMIEGQR-KGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           K   KA    +R  G II  +S+    G + +  YS SK  ++G  ++   EL + GI V
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  V + M  +    Y    ++  EE     R +  +  GR  + E+VA    +L 
Sbjct: 180 NAVCPGFVETPMAASVREHYADIWEVSTEEA--FDRITARVPLGRYVTPEEVAGMVAYLI 237

Query: 249 SEEAGFITAHNLVIDGG 265
            + A  +TA  L + GG
Sbjct: 238 GDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  100 bits (251), Expect = 3e-25
 Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 31/229 (13%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------ 61
           R  G+V ++TG   G+G A A  FAE GA +V+ D+  +   +  S+             
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 62  GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN 121
           GG+ +  +    ED E  V+ A+   G++DI+ NNAGI     S   ++ ED   ++ V+
Sbjct: 62  GGKAV-ANYDSVEDGEKIVKTAIDAFGRVDILVNNAGIL-RDRSFAKMSEEDWDLVMRVH 119

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           L G     + A   M + Q+ G II TSS+A + G      YS +K  ++GL+ + A E 
Sbjct: 120 LKGSFKVTRAAWPYMRK-QKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEG 178

Query: 182 GKHGIRVNCISPH-------GVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
            K+ I  N I+P         V  E L +A         +KPE V  +V
Sbjct: 179 AKYNITCNTIAPAAGSRMTETVMPEDLFDA---------LKPEYVAPLV 218

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 21/258 (8%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGR--YIHCDVT 71
           L GKVA+ITG   G+G   A   A+ GA IV   + +     A    +G +  +I  D+ 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           +++D++S V  AV   G +DI+ NNAGI      +     +D   ++++N   +    + 
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRRQ-DLLEFGNKDWDDVININQKTVFFLSQA 124

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
            AK  ++    G II  +S  +  GG+   +Y+ SK A++GL R+ A EL ++ I VN I
Sbjct: 125 VAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAALFLA 248
           +P           Y      A ++ +      R+   L R    R  + +D+A  A+FL+
Sbjct: 185 AP----------GYMATDNTAALRADT----ARNEAILERIPASRWGTPDDLAGPAIFLS 230

Query: 249 SEEAGFITAHNLVIDGGY 266
           S  + ++T + L +DGG+
Sbjct: 231 SSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 98.0 bits (245), Expect = 3e-25
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 20/175 (11%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA-HIV----------IADILDELGAALASTIGGRYI 66
              +ITGG  G+G A A+  A  GA H+V           A+++ EL A  A        
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEV---TVA 57

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            CDV   + + + +    +  G LD + +NAG+    G +  L  E  + +L+  + G  
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAGVLDD-GPLEELTPERFERVLAPKVTGAW 116

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           +  +            G+ +  SS A ++G      Y+ +  A+  LA     E 
Sbjct: 117 NLHELTR-----DLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  100 bits (250), Expect = 3e-25
 Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 19/262 (7%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY---I 66
           L +  L GKVAV+TG   G+G   A   AE G  IV  +I++        T  GR    +
Sbjct: 3   LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSL 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSI--TSLNMEDVKFLLSVNLNG 124
             D+ K + + + +  AV+  G +DI+ NNAG+     +I  +  + +DV   +++N+  
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDV---MNLNIKS 119

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +    + AAK  I     G II  +S  +  GG+   +Y+ SK  ++G+ R  A E  KH
Sbjct: 120 VFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKH 179

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            I VN I+    P  M  N  ++   +AD   E+    + D   +  GR     D+    
Sbjct: 180 NINVNAIA----PGYMATNNTQQL--RAD---EQRSAEILD--RIPAGRWGLPSDLMGPV 228

Query: 245 LFLASEEAGFITAHNLVIDGGY 266
           +FLAS  + +I  + + +DGG+
Sbjct: 229 VFLASSASDYINGYTIAVDGGW 250

Length = 253

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 98.9 bits (247), Expect = 8e-25
 Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 7/186 (3%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHC-DVTKEE 74
            +ITG + GIG A A+ FA+ G ++ +A    D LDEL A L +      +   DVT EE
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
             +  +    +  G LD++  NAG+   G S+  L+ +  +  +  NL G    ++ A  
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGK-GTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
                + +G ++  SS AA+ G   + AYS SK A+  LA S   ++ K GIRV  I+P 
Sbjct: 120 QFRA-KGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPG 178

Query: 195 GVPSEM 200
            + + +
Sbjct: 179 FIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 97.9 bits (244), Expect = 2e-24
 Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 23/255 (9%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL-------ASTIGGRYIHCDV 70
           ++A++TGG  GIG A  +  A++G + V A+       A        A     R +  DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDG-YRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +  E  ++AV    +  G +D++ NNAGI+    +   +  E    ++  NLN + +  +
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNSVFNVTQ 118

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                M E +  G II  SS     G      YS +K  +IG  ++ A E    G+ VN 
Sbjct: 119 PVIDGMRE-RGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ISP  + ++M V A R          E+V   +     +  GR    E++A A  FLASE
Sbjct: 178 ISPGYIATDM-VMAMR----------EDVLNSIVAQIPV--GRLGRPEEIAAAVAFLASE 224

Query: 251 EAGFITAHNLVIDGG 265
           EAG+IT   L I+GG
Sbjct: 225 EAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 35/273 (12%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD---ILDELGAALASTIGGRY-I 66
            ++R  GKV V+TG A+GIG   A   A  GA +V+ D   ++ E+ A L +  G    +
Sbjct: 2   MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALAL 61

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSI-----TSLNMEDVKFLLSVN 121
             D+      ++A+  AV   G++D++ NN      GG+I          E ++  +  +
Sbjct: 62  TADLETYAGAQAAMAAAVEAFGRIDVLINNV-----GGTIWAKPFEEYEEEQIEAEIRRS 116

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           L   L   +     M+  Q  G+I+  SS A    G+    YS +K  +  L  S A E 
Sbjct: 117 LFPTLWCCRAVLPHMLA-QGGGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLAFEY 173

Query: 182 GKHGIRVNCISPHGV---PSEMLVNAYRKYLGKADMKPEE------VCKMVRDSGSLLRG 232
            +HGIRVN ++P G    P  +  NA       A    +E      +     DS SL+  
Sbjct: 174 AEHGIRVNAVAPGGTEAPPRRVPRNA-------APQSEQEKAWYQQIVDQTLDS-SLM-K 224

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           R  +I++   A LFLAS+EA +IT   L + GG
Sbjct: 225 RYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 96.8 bits (241), Expect = 6e-24
 Identities = 87/268 (32%), Positives = 124/268 (46%), Gaps = 43/268 (16%)

Query: 18  KVAVITGGARGIGAATAKLFAENG-------------AHIVIADILDELGAALASTIGGR 64
           KV +ITG +RGIGAATA L AE G             A  V+  I  + G ALA      
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA------ 56

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DV  E DV           G+LD + NNAGI  +   +  ++   +  + + N+ G
Sbjct: 57  -VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVG 115

Query: 125 ILHGIKHAAKAM--IEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAI----IGLARST 177
                + A K M    G R G+I+  SS AA +G    +  Y+ SK AI    IGLA+  
Sbjct: 116 SFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEV 175

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A E    GIRVN + P  + +E+  +A     G+ D          R    +  GR  + 
Sbjct: 176 AAE----GIRVNAVRPGVIYTEI--HASGGEPGRVD----------RVKAGIPMGRGGTA 219

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           E+VA+A L+L S+EA + T   + + GG
Sbjct: 220 EEVARAILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCDV 70
           + GK+ ++TGG+RGIG   A+ F E GA ++I    A+   +    L++      I  D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI----- 125
           + EE +E+ V        +LD++ NNAG +  G  + +        ++ +N+  +     
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAG-ATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 126 --LHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACELG 182
             L  ++ AA A    +    +I   S A I+  GL +++Y  SK A+  L R  A EL 
Sbjct: 123 ALLPLLRAAATA----ENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
              I VN I+P   PS+M       +L       E   K      S+  GR    ED+A 
Sbjct: 179 GEHITVNAIAPGRFPSKMT-----AFLLNDPAALEAEEK------SIPLGRWGRPEDMAG 227

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
            A+ LAS    ++T   + +DGG
Sbjct: 228 LAIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 95.6 bits (238), Expect = 2e-23
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 20/260 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIH-- 67
           RL G+ A+ITG ++GIG A A+ F   GA ++I    AD L +    LA     R +H  
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 68  -CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+ +ED  + +         L I+ NNAG +    +      ++ + +   NL    
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAA-IDYTEDEWRGIFETNLFSAF 124

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             +   A  +++     +I+   S + +    +   Y ++K A++ + R+ A E  + GI
Sbjct: 125 E-LSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGI 183

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P  +         R  L    +   +  + V +   +   R    E+VA A  F
Sbjct: 184 RVNAVAPWYI---------RTPLTSGPLSDPDYYEQVIERTPM--RRVGEPEEVAAAVAF 232

Query: 247 LASEEAGFITAHNLVIDGGY 266
           L    A +IT   + +DGG+
Sbjct: 233 LCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 94.8 bits (236), Expect = 4e-23
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 25/264 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRY-IHCD 69
           L GKVA++TG + G+GA  A++ A+ GA +V+A    + L EL A + +  G  + +  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT  + +++AV  A +  G +DI+ NN+G+S +   +  +   D  F+   N  G     
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQ-KLVDVTPADFDFVFDTNTRGAFFVA 125

Query: 130 KHAAKAMI-------EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
           +  AK MI         +  G II  +S A +        Y +SK A++ + R+ A E G
Sbjct: 126 QEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG 185

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           +HGI VN I P  + +E+  + +    G+         K+V     L R R    ED+  
Sbjct: 186 RHGINVNAICPGYIDTEINHHHWETEQGQ---------KLV---SMLPRKRVGKPEDLDG 233

Query: 243 AALFLASEEAGFITAHNLVIDGGY 266
             L LA++E+ FI    +  D G+
Sbjct: 234 LLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 94.5 bits (235), Expect = 5e-23
 Identities = 69/277 (24%), Positives = 107/277 (38%), Gaps = 61/277 (22%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV 80
           VITG A GIGAATA+L  + G  ++  D+ +              +  D++  E   +A+
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREA------------DVIADLSTPEGRAAAI 50

Query: 81  -RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
             +     G LD + N AG+ G+  +        V   L VN  G+   ++     + +G
Sbjct: 51  ADVLARCSGVLDGLVNCAGVGGTTVA------GLV---LKVNYFGLRALMEALLPRLRKG 101

Query: 140 QRKGSIICTSSSAAIMG--------------------GLASHA-------YSLSKEAIIG 172
               + +  SS A                         LA HA       Y+ SKEA+  
Sbjct: 102 H-GPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEALTV 160

Query: 173 LARSTACE-LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR 231
             R  A   L   G+RVN ++P  V + +L               +       D+     
Sbjct: 161 WTRRRAATWLYGAGVRVNTVAPGPVETPIL----------QAFLQDPRGGESVDAFVTPM 210

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
           GR A  +++A    FLAS+ A +I   NL +DGG   
Sbjct: 211 GRRAEPDEIAPVIAFLASDAASWINGANLFVDGGLDA 247

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 8e-23
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 36/268 (13%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC-----D 69
           LTG+ A++TG ++GIG A A+  A+ GA +++        AA A ++ G+ +       D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT  + V +A+    +  G +DI+ NNAG+      +     +  + LL  N++ + +  
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR-TPLEDFPADAFERLLRTNISSVFYVG 126

Query: 130 KHAAKAMIEGQRKGSIICTSS--SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           +  A+ MI  +  G II  +S  SA    G+A   Y+ +K A+  L +  A +  KHG++
Sbjct: 127 QAVARHMI-ARGAGKIINIASVQSALARPGIAP--YTATKGAVGNLTKGMATDWAKHGLQ 183

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLR----GRSASIEDV 240
            N I+P           +   L  A         +V D   S  L +    GR   +E++
Sbjct: 184 CNAIAP---------GYFDTPLNAA---------LVADPEFSAWLEKRTPAGRWGKVEEL 225

Query: 241 AQAALFLASEEAGFITAHNLVIDGGYTT 268
             A +FLAS+ + F+  H L +DGG T 
Sbjct: 226 VGACVFLASDASSFVNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 92.3 bits (229), Expect = 4e-22
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA------STIGGRYIHCDV 70
           G+ AVITGGA GIG AT   FA  GA +V+ D+ D+ G   A             + CDV
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDV-DKPGLRQAVNHLRAEGFDVHGVMCDV 64

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
              E+V      A    G +D++F+NAGI   GG I  +  +D ++++ V+L G +H ++
Sbjct: 65  RHREEVTHLADEAFRLLGHVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                ++E    G ++ T+S A ++      AY ++K  ++GLA + A E+   GI V+ 
Sbjct: 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSV 183

Query: 191 ISPHGVPSEMLVNAYR 206
           + P  V + ++ N+ R
Sbjct: 184 LCPMVVETNLVANSER 199

Length = 275

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.6 bits (228), Expect = 5e-22
 Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 24/260 (9%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA----STIGGR--YIHCDVT 71
            VA++TGG RGIG   A+  A  G  + I D  D+   A        +G    +   DV 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIK 130
                E+ +  A +  G++D + NNAG+     G +  L  E    +L++NL G     +
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 131 HAAKAMIEGQRK-----GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             AK M+           SI+  SS  AIM       Y +SK  +   A+  A  L + G
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEG 182

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I V  + P  + ++M      KY                  G +   R    EDVA+A  
Sbjct: 183 IGVYEVRPGLIKTDMTAPVTAKYDALI------------AKGLVPMPRWGEPEDVARAVA 230

Query: 246 FLASEEAGFITAHNLVIDGG 265
            LAS +  + T   + +DGG
Sbjct: 231 ALASGDLPYSTGQAIHVDGG 250

Length = 256

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 91.5 bits (227), Expect = 6e-22
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 18  KVAVITGGARGIGAATAKLFAENG-------------AHIVIADILDELGAALASTIGGR 64
            +A++TGG+RGIG ATA L A+ G             A  V+  I    G A        
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV------ 55

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  D++ E  V +           L  + NNAGI  +  ++ +L  E +  +LS N+ G
Sbjct: 56  -LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114

Query: 125 ILHGIKHAAKAMI--EGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACEL 181
                + A K M    G   G+I+  SS+A+ +G    +  Y+ SK AI  L    + E+
Sbjct: 115 YFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEV 174

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
              GIRVNC+ P  + +EM  +A     G+ D          R   ++   R    E+VA
Sbjct: 175 AAQGIRVNCVRPGFIYTEM--HASGGEPGRVD----------RVKSNIPMQRGGQPEEVA 222

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
           QA ++L S++A ++T   + + GG
Sbjct: 223 QAIVWLLSDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 91.4 bits (227), Expect = 6e-22
 Identities = 74/260 (28%), Positives = 110/260 (42%), Gaps = 24/260 (9%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA------LASTIGGRYIHCDVTK 72
           VA++TG +RGIG A A   A  G  I I D+ D+  A       LA+     Y   D+ +
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGILHGIKH 131
             D E+ +  A    G+LD + NNAGI+    G +  L  +    L+++NL G     + 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 132 AAKAMIEGQRK-----GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
            A+ M+E   +      SII  +S  A +       Y +SK  +    R  A  L   GI
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            V+ I P  + ++M      KY                 +G +   R    ED+A+A   
Sbjct: 183 AVHEIRPGLIHTDMTAPVKEKYDELI------------AAGLVPIRRWGQPEDIAKAVRT 230

Query: 247 LASEEAGFITAHNLVIDGGY 266
           LAS    + T   + IDGG 
Sbjct: 231 LASGLLPYSTGQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 91.1 bits (226), Expect = 7e-22
 Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 17/253 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTK 72
           L+G+ A++TG + GIG   A+L    GA + +     E   ALA+ +G R      +++ 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            ++V++  + A +    +DI+ NNAGI+   G    ++ ED   +L VNL       +  
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGIT-KDGLFVRMSDEDWDSVLEVNLTATFRLTREL 122

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              M+  +R G II  +S   + G      Y  SK  +IG ++S A E+    + VNC++
Sbjct: 123 THPMMR-RRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA 181

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + S M         GK + K +E        G++   R  +  +VA A  +LAS EA
Sbjct: 182 PGFIESAM--------TGKLNDKQKEAIM-----GAIPMKRMGTGAEVASAVAYLASSEA 228

Query: 253 GFITAHNLVIDGG 265
            ++T   + ++GG
Sbjct: 229 AYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 7e-22
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 40/261 (15%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYIHCDVT 71
           ++ +  ++TG  +GIG A +   A  G  ++        G A  S I    G    CD+ 
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVI--------GIA-RSAIDDFPGELFACDLA 51

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             E   + +   ++    +D + NN GI+     +  +++  ++ +  +N+   +   + 
Sbjct: 52  DIEQTAATLA-QINEIHPVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
             + M    R+   I    S AI G L   +YS +K A++G  R+ A EL ++GI VN +
Sbjct: 110 FLEGMK--LREQGRIVNICSRAIFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167

Query: 192 SPHGVPSEML-------VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           +P  + +E+            ++ L    M+                 R  + E+VA A 
Sbjct: 168 APGPIETELFRQTRPVGSEEEKRVLASIPMR-----------------RLGTPEEVAAAI 210

Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FL S++AGFIT   L +DGG
Sbjct: 211 AFLLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 90.1 bits (224), Expect = 1e-21
 Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 27/200 (13%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA---------DILDELGAALASTI---- 61
           L+GKVA +TG +RGIG A A   A+ GA +V+A              L   +  T     
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 62  --GGRY--IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITS-LNMEDVKF 116
             GG+   I  DV  E+ V + V   V   G+LDI+ NNAG       ++   +    +F
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGA----IWLSLVEDTPAKRF 116

Query: 117 LLSVNLNGILHGIKHAAKAMI---EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
            L   +N  L G    ++A +       +G I+  S   ++       AY+  K  +  L
Sbjct: 117 DLMQRVN--LRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRL 174

Query: 174 ARSTACELGKHGIRVNCISP 193
               A EL +HGI VN + P
Sbjct: 175 TLGLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 90.2 bits (224), Expect = 2e-21
 Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG--AALASTIGGRYIHC---D 69
           L GK  +ITG A+GIG   A   AE GA I+I DI  E    A       G   H    +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT +++VE+A+       G +D++ NNAGI       T    ++   +++VN   +    
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVS 125

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +  A+ M++ Q  G II   S  + +G      Y+ SK A+  L R    EL +H I+VN
Sbjct: 126 QAVARYMVKRQA-GKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVN 184

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I+P    +EM      K L + +     +CK           R    +++  AA+FL+S
Sbjct: 185 GIAPGYFKTEM-----TKALVEDEAFTAWLCKRTP------AARWGDPQELIGAAVFLSS 233

Query: 250 EEAGFITAHNLVIDGG 265
           + + F+  H L +DGG
Sbjct: 234 KASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 89.3 bits (222), Expect = 2e-21
 Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 11/213 (5%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY----IHCDVTKE 73
           KVA++TG +RGIG   A+  A +G  + +          LA+          +  D    
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSL---GLRNPEDLAALSASGGDVEAVPYDARDP 57

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           ED  + V       G++D++ +NAGI     ++   +  +++   S+N+       +   
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPT-TLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
            A+ E    G ++  +S +       +  YS SK A+  LA +   E   HG+RV+ + P
Sbjct: 117 PALREAGS-GRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 194 HGVPSEMLVNAYRKYLGKAD--MKPEEVCKMVR 224
             V + M            +  ++P+++  +VR
Sbjct: 176 GFVDTPMAQGLTLVGAFPPEEMIQPKDIANLVR 208

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 88.7 bits (220), Expect = 3e-21
 Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 28/232 (12%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI-ADILDELGAALASTIGG-RYIHCDVTKEED 75
           K A++TG +RGIG ATA+L    G  + I A     L AA A  + G   +  DV  E D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEAD 60

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           V  AV       G LD + NNAG+ G    +  L  E+ + +L  NL G  + I  AA A
Sbjct: 61  VRRAVDAMEEAFGGLDALVNNAGV-GVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPA 119

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           ++     G+I+   S A         AY+ SK  ++GL+ +   +L +  IRV  + P  
Sbjct: 120 LLRRGG-GTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 196 VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           V +             A     +  K+             + EDVAQA LF 
Sbjct: 179 VDTGF-----------AGSPEGQAWKL-------------APEDVAQAVLFA 206

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 88.8 bits (221), Expect = 6e-21
 Identities = 79/270 (29%), Positives = 114/270 (42%), Gaps = 52/270 (19%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVI--------ADIL-DELGAALA-STIGGRYI 66
            KVA+ITGGAR IGAA A+     G  + I        AD L  EL A    S      +
Sbjct: 6   AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAA---AL 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG--ISGSGGSITSLNMEDVKFLLSVNLNG 124
             D+   + +   V   V+  G+LD + NNA        GSIT    +D   L + NL  
Sbjct: 63  QADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDD---LFASNLKA 119

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--LASHA-YSLSKEAIIGLARSTACEL 181
                + AA  +   +++G+I+   +   I     L  +  Y  +K A+  L RS A EL
Sbjct: 120 PFFLSQAAAPQL--RKQRGAIV---NITDIHAERPLKGYPVYCAAKAALEMLTRSLALEL 174

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE------EVCKMVRDSGSLLRGRSA 235
               +RVN ++P                  A + PE      E  +    + + L  R  
Sbjct: 175 APE-VRVNAVAP-----------------GAILWPEDGNSFDEEARQAILARTPL-KRIG 215

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           + ED+A+A  FL   +A FIT   L +DGG
Sbjct: 216 TPEDIAEAVRFLL-ADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 7e-21
 Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 14/208 (6%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTKEE 74
            +ITG +RGIG    +     G + VIA         EL A  AS      +  DVT E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 75  DVESAVRLAVSWKGQ-LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
             ESA  +A       LD++ NNAGI  S G  + ++ ED+  +  VN+ G L   +   
Sbjct: 61  A-ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLAS---HAYSLSKEAIIGLARSTACELGKHGIRVNC 190
             +++G R   II  SS    +G   S   ++Y  SK A+  L +S A EL + GI V  
Sbjct: 120 PLLLKGARA-KIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVVS 178

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEE 218
           + P  V ++M     +    K  + PEE
Sbjct: 179 LHPGWVRTDMGGPFAK---NKGPITPEE 203

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 8e-21
 Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 14/261 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIH--- 67
           L G+VAV+TGG+ GIG AT +L  E GA + I     + L    A L     G  +    
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL--LSVNLNGI 125
           CDV  E DV +      +  G +D++ NNA   G G   T  +  D  +   L +    +
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNA---GQGRVSTFADTTDDAWRDELELKYFSV 122

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
           ++  + A   ++      SI+C +S  A+       A S ++  ++ L +S A EL   G
Sbjct: 123 INPTR-AFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKG 181

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN I    V S      Y                + R  G  L GR    ++ A+A  
Sbjct: 182 VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL-GRLGRPDEAARALF 240

Query: 246 FLASEEAGFITAHNLVIDGGY 266
           FLAS  + + T  ++ + GG+
Sbjct: 241 FLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 11/179 (6%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           KVA++TG + GIG ATA+  A  G + V     +   A  A   G   +  DVT +  V+
Sbjct: 5   KVALVTGASSGIGRATAEKLARAG-YRVFGTSRN--PARAAPIPGVELLELDVTDDASVQ 61

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
           +AV   ++  G++D++ NNAG+  +G +  S ++   + L   N+ GIL   +     M 
Sbjct: 62  AAVDEVIARAGRIDVLVNNAGVGLAGAAEES-SIAQAQALFDTNVFGILRMTRAVLPHM- 119

Query: 138 EGQRKGSIICTSSSAAIMGGLAS---HAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
             Q  G II  SS   ++G L +     Y+ SK A+ G + S   E+ + GIRV+ + P
Sbjct: 120 RAQGSGRIINISS---VLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEP 175

Length = 270

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR------YIHCDVT 71
           K   +TG A GIG ATA   A  GA + + D   +  A   +           +   D++
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             + V +      +  G +D++ N AGIS + G++  L  E  + ++ VNL G +H I+ 
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNC 190
               M+   R G ++  SS+A ++  L  H AYS SK  + GL+     +L +HGI V+ 
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLV-ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSV 178

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           + P  V +  LVN     +   D +   V K V       RG + + E  A+  L
Sbjct: 179 VVPGAVKTP-LVNTVE--IAGVDREDPRVQKWVD----RFRGHAVTPEKAAEKIL 226

Length = 272

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 87.4 bits (217), Expect = 3e-20
 Identities = 61/182 (33%), Positives = 82/182 (45%), Gaps = 4/182 (2%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTKE 73
             KV  ITG +RG G A  +   E G  +V         A LA   G R   +  DVT  
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDR 61

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
             V +AV  AV   G+LDI+ NNAG  G  G I  +   + +  +  N  G L  +  A 
Sbjct: 62  AAVFAAVETAVEHFGRLDIVVNNAGY-GLFGMIEEVTESEARAQIDTNFFGALW-VTQAV 119

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
              +  QR G II  SS   I     S  Y  SK A+ G++ + A E+ + GI+V  + P
Sbjct: 120 LPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179

Query: 194 HG 195
            G
Sbjct: 180 GG 181

Length = 275

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 28/271 (10%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG--G 63
            S  + GK  VI+GG RGIG A    FA++G +I        +  +++   L    G   
Sbjct: 2   MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKA 61

Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-----GSITSLNMEDVKFLL 118
           +    ++ + E  +   +       ++D   +NA ISG            L  + +  + 
Sbjct: 62  KAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIY 121

Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--MGGLASHAYSLSKEAIIGLARS 176
           +  +N  + G + AAK M E    GSII  SS+  +  +   A H    SK A+  + + 
Sbjct: 122 TATVNAFVVGAQEAAKRM-EKVGGGSIISLSSTGNLVYIENYAGHG--TSKAAVETMVKY 178

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A ELG+  IRVN +S   + ++ L  A+  Y        EEV     +   L   R   
Sbjct: 179 AATELGEKNIRVNAVSGGPIDTDAL-KAFTNY--------EEVKAKTEELSPL--NRMGQ 227

Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            ED+A A LFL SE+A ++T   +V+DGG T
Sbjct: 228 PEDLAGACLFLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 86.4 bits (214), Expect = 5e-20
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 17/261 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVT 71
           RL G+V ++TGGA G+G A    F   GA + + D        L +  G     +  DV 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVR 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNME--DVKF--LLSVNLNGILH 127
             +D + AV   V+  G++D +  NAGI     ++  +  +  D  F  +  +N+ G L 
Sbjct: 62  SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLL 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            +K A  A++    +GS+I T S+A          Y+ +K A++GL +  A EL  + +R
Sbjct: 122 AVKAALPALV--ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VR 178

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEV--CKMVRDSGSLLRGRSASIEDVAQAAL 245
           VN ++P G+ S++      K LG AD     V    M++    L  GR    E+   A +
Sbjct: 179 VNGVAPGGMSSDL---RGPKSLGMADKSISTVPLGDMLKS--VLPIGRMPDAEEYTGAYV 233

Query: 246 FLASE-EAGFITAHNLVIDGG 265
           F A+  +    T   L  DGG
Sbjct: 234 FFATRGDTVPATGAVLNYDGG 254

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 7e-20
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 30/203 (14%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----------------LDELGAAL 57
           L G+V ++TG   GIG A A  FA  GA +V+ DI                 +DE+ AA 
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA- 62

Query: 58  ASTIGGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
               GG  +    D+   +   + V  AV   G LD++ NNAGI      I +++ E+  
Sbjct: 63  ----GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGIL-RDRMIANMSEEEWD 117

Query: 116 FLLSVNLNGILHGIKHAA-----KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
            +++V+L G    ++HAA     ++         II TSS A + G +    YS +K  I
Sbjct: 118 AVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177

Query: 171 IGLARSTACELGKHGIRVNCISP 193
             L    A ELG++G+ VN I+P
Sbjct: 178 AALTLVAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 7e-20
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 22/249 (8%)

Query: 19  VAVITGGARGIGAATAK-LFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTK 72
           V ++TG +RGIG A A+ L       +V+      + L EL   L   +    +  D++ 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              VE  +       G+ D++ NNAG  G    I  +++++++    +NL   +      
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTL 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            +A  +   K +++  SS AA+        Y  SK A     R  A E     +RV   +
Sbjct: 121 LRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRVLSYA 178

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVAQAALFLAS 249
           P  V ++M          +      E     R     G LL       E  A+    L  
Sbjct: 179 PGVVDTDMQREI------RETSADPETRSRFRSLKEKGELL-----DPEQSAEKLANLLE 227

Query: 250 EEAGFITAH 258
           ++     AH
Sbjct: 228 KDKFESGAH 236

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 9/176 (5%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIH--CDVTK 72
           V VITG + GIG ATA  FAE GA +V+A    + L EL A     +GG  I    DV  
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHEL-AREVRELGGEAIAVVADVAD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              VE A   AV   G++D   NNAG+    G    +  E+ + +  VN  G ++G   A
Sbjct: 61  AAQVERAADTAVERFGRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAA 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
              +      G++I   S           AYS SK A+ G   S   EL   G  +
Sbjct: 120 LPHLRRRG-GGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPI 174

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 86.1 bits (214), Expect = 2e-19
 Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 9/185 (4%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR- 64
           +  K +  +V VITG + G+G ATA+ FA  GA +V+     + L+ L A + +  GG  
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEA 59

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             +  DV   E V++A   A    G +D   NNA ++   G    +  E+ + +  V   
Sbjct: 60  LAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYL 118

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G++HG   A + M   + +G+II   S+ A        AY  +K AI G   S  CEL  
Sbjct: 119 GVVHGTLAALRHMRP-RDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLH 177

Query: 184 HGIRV 188
            G  V
Sbjct: 178 DGSPV 182

Length = 334

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 73/260 (28%), Positives = 109/260 (41%), Gaps = 38/260 (14%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI---------ADILDELGAALASTIGGRYIHC 68
            VA++TG A+ IG A A+  A  G  +V+           + DEL A   S +    +  
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVL---VQA 57

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D++        V  A    G+ D++ NNA        +   + +    L  +NL      
Sbjct: 58  DLSDFAACADLVAAAFRAFGRCDVLVNNASAFYP-TPLGQGSEDAWAELFGINLKAPYLL 116

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           I+  A+  + G R GSII    +          AY +SK A+ GL RS A EL  + IRV
Sbjct: 117 IQAFAR-RLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 189 NCISPHG--VPSEMLVNAYR-KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           N I+P G  +  E +   YR   L K  +K                 R  S E++A A +
Sbjct: 175 NGIAP-GLILLPEDMDAEYRENALRKVPLK-----------------RRPSAEEIADAVI 216

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FL    + +IT   + +DGG
Sbjct: 217 FLLD--SNYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRY-IHC 68
            L GK  +ITG ++GIGAA A+ FA  G H+ +     D L+ L A L +  G    +H 
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 69  -DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++  E  E     A    G +DI+ NNAG +  GG +  ++    +    + + G + 
Sbjct: 64  LDLSSPEAREQLAAEA----GDIDILVNNAG-AIPGGGLDDVDDAAWRAGWELKVFGYID 118

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A   M + +  G I+    +A           S    A++   R+   +    G+R
Sbjct: 119 LTRLAYPRM-KARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVR 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           V  ++P  V ++ ++   +   G+A  +  +  +       L  GR A+ E+VA    FL
Sbjct: 178 VVGVNPGPVATDRMLTLLK---GRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFL 234

Query: 248 ASEEAGFITAHNLVIDGGYTTGTS 271
           AS  +G+ +   + +DGG +   S
Sbjct: 235 ASPRSGYTSGTVVTVDGGISARGS 258

Length = 259

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 83.1 bits (206), Expect = 7e-19
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 17/185 (9%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGG--RYIHC 68
             K  +ITG   G G   A   A  G H VIA +     +  L A  A+  G   R    
Sbjct: 1   MSKTILITGAGSGFGREVALRLARKG-HNVIAGVQIAPQVTALRAE-AARRGLALRVEKL 58

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D+T   D   A    V      D++ NNAGI G  G++  + +E V+ L   N+ G L  
Sbjct: 59  DLTDAIDRAQAAEWDV------DVLLNNAGI-GEAGAVVDIPVELVRELFETNVFGPLEL 111

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +   + M+  + KG ++ TSS A ++ G  + AY  SK A+  +A +   EL   GI+V
Sbjct: 112 TQGFVRKMVA-RGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQV 170

Query: 189 NCISP 193
             ++P
Sbjct: 171 ATVNP 175

Length = 257

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 7e-19
 Identities = 66/251 (26%), Positives = 100/251 (39%), Gaps = 25/251 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRY--IH 67
           R  G+VA++TG + GIGAA A+   ++G  +V      D ++ L A   S          
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CD++ EE + S      +    +D+  NNAG+      + S   E  K +  VN+  +  
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGL-ARPEPLLSGKTEGWKEMFDVNVLALSI 121

Query: 128 GIKHAAKAMIE-GQRKGSIICTSSSAA--IMGGLASHAYSLSKEAIIGLARSTACEL--G 182
             + A ++M E     G II  +S +   +      H Y+ +K A+  L      EL   
Sbjct: 122 CTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREA 181

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           K  IR   ISP  V +E       K        PE+          L        EDVA 
Sbjct: 182 KTHIRATSISPGLVETEFAF----KLHDN---DPEKAAATYESIPCLKP------EDVAN 228

Query: 243 AALFLASEEAG 253
           A L++ S    
Sbjct: 229 AVLYVLSTPPH 239

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 82.6 bits (204), Expect = 7e-19
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 15/202 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIV-----------IADILDELGAALASTIGG 63
           L  ++ ++TG + GIG   A  +A  GA ++           +AD ++E G         
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             + C  T E   + A R+AV++  +LD + +NAG+ G    ++  N +  + +  VN+N
Sbjct: 62  DLLTC--TSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVN 118

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
                +  A   ++     GS++ TSSS    G     AY++SK A  GL +  A E  +
Sbjct: 119 -ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177

Query: 184 HGIRVNCISPHGVPSEMLVNAY 205
             +RVNCI+P G  + M  +A+
Sbjct: 178 RNLRVNCINPGGTRTAMRASAF 199

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 8e-19
 Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 21/257 (8%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILD----ELGAALASTIGGR--YIHCDVT 71
           KV +ITG +RGIG ATA L A  G  + I    D    E  A      GGR   +  DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            E DV +      S  G+LD + NNAGI      +  ++   ++ +   N+ G     + 
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122

Query: 132 AAKAMI--EGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRV 188
           AA+ +    G R G+I+  SS A+ +G    +  Y+ SK A+  L    A ELG HG+RV
Sbjct: 123 AARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  + +E+  +      G+         +  R       GR+   ++VA+  ++L 
Sbjct: 183 NAVRPGLIETEIHASG-----GQPG-------RAARLGAQTPLGRAGEADEVAETIVWLL 230

Query: 249 SEEAGFITAHNLVIDGG 265
           S+ A ++T   L + GG
Sbjct: 231 SDAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 82.8 bits (204), Expect = 9e-19
 Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRY-I 66
           K L GKVA++TG +RGIG A A   A +GA + I         DE    + S  G  + I
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 67  HCDVTKEEDV---------ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL 117
             D+   + V         E  +R+  S   ++DI+ NNAGI G+ G+I +   E    +
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTS---EIDILVNNAGI-GTQGTIENTTEEIFDEI 117

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           ++VN+      I+     +   + +G +I  SS+   +G   S AY LSK A+  +    
Sbjct: 118 MAVNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPL 174

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A  LG+ GI VN I P    ++  +NA  K L   +++          + S + GR   +
Sbjct: 175 AKHLGERGITVNTIMPGYTKTD--INA--KLLDDPEIRNFA-------TNSSVFGRIGQV 223

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGGY 266
           ED+A A  FLAS ++ ++T   + + GG+
Sbjct: 224 EDIADAVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 24/196 (12%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI---------ADILDELGAALASTIGGRY 65
           L+GKVAV+TG A G+G A A   A  GA +V+         +D+LDE+ AA     G + 
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-----GAKA 64

Query: 66  IHC--DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
           +    D+++    +  V  AV   G LDI+ NNAGI+     + +++ E+   +++V+L 
Sbjct: 65  VAVAGDISQRATADELVATAVGL-GGLDIVVNNAGIT-RDRMLFNMSDEEWDAVIAVHLR 122

Query: 124 GILHGIKHAA-----KAMIEGQR-KGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           G     ++AA     KA   G    G I+ TSS A ++G +    Y  +K  I  L  S 
Sbjct: 123 GHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSA 182

Query: 178 ACELGKHGIRVNCISP 193
           A  LG++G+R N I P
Sbjct: 183 ARALGRYGVRANAICP 198

Length = 306

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 13/187 (6%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTK 72
           KVA++TG + GIG ATA+  A  G + V       D +++L +      G   +  DVT 
Sbjct: 4   KVALVTGASSGIGKATARRLAAQG-YTVYGAARRVDKMEDLASL-----GVHPLSLDVTD 57

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E  +++AV   ++ +G++D++ NNAG  GS G+I  + +++ +    VNL G     +  
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGY-GSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              M   QR G II  SS    +       Y  +K A+ G + +   E+   GI V  I 
Sbjct: 117 LPHM-RAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIE 175

Query: 193 PHGVPSE 199
           P G+ +E
Sbjct: 176 PGGIKTE 182

Length = 273

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 81.5 bits (201), Expect = 2e-18
 Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 21/251 (8%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVI------ADILDELGAALASTIGGRYIHCDVTKEE 74
           ++TG +RGIG A A   A +G  I +      +D    + A  A     R +  DV    
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
              + +   ++  G    +  NAGI+    +  +L+ ED   ++  NL+G  + I     
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGIT-RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTM 120

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            MI  ++ G II  +S + +MG      YS +K  +IG  ++ A EL K  I VNCI+P 
Sbjct: 121 PMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPG 180

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
            + +EML               E    +     ++   R     +VA  A FL S+ A +
Sbjct: 181 LIDTEMLA--------------EVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASY 226

Query: 255 ITAHNLVIDGG 265
           +T   + ++GG
Sbjct: 227 VTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 10/190 (5%)

Query: 3   ARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALA 58
           AR    +     L GKV +ITG + GIG ATA   AE GA + +     + LDEL A + 
Sbjct: 360 ARRRDLR---GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIR 416

Query: 59  STIGGRYIH-CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN-MEDVKF 116
           +  G  + + CD+T    V+  V+  ++  G +D + NNAG S       S +   D + 
Sbjct: 417 AKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYER 476

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
            ++VN  G +  I      M E +R G ++  SS           AY  SK A+   +  
Sbjct: 477 TMAVNYFGAVRLILGLLPHMRE-RRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDV 535

Query: 177 TACELGKHGI 186
            A E    GI
Sbjct: 536 AASETLSDGI 545

Length = 657

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 81.7 bits (202), Expect = 3e-18
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 23/206 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA--DILDELG--AALASTIGGRYI--HC 68
           L+GK+A++TG +RGIG   A    E GA + I    IL +L   A      GG+ I   C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF----------L 117
           D + +++VE+   R+A   +G+LDI+ NNA           L      F          +
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNA----YAAVQLILVGVAKPFWEEPPTIWDDI 116

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
            +V L        +AA  M++   KG I+  SS+  +   L + AY + K AI  +A   
Sbjct: 117 NNVGLRAHYACSVYAAPLMVK-AGKGLIVIISSTGGLE-YLFNVAYGVGKAAIDRMAADM 174

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVN 203
           A EL  HG+ V  + P  V +E+++ 
Sbjct: 175 AHELKPHGVAVVSLWPGFVRTELVLE 200

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 81.1 bits (201), Expect = 3e-18
 Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 38/267 (14%)

Query: 17  GKVAVITGGA--RGIGAATAKLFAENGAHIVI---ADILDELGAALASTIGG--RYIHCD 69
           GK  +ITG A  R I    AK   E GA +      + L +    LA  +G     + CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  VTKEEDVES-AVRLAVSWKGQLDIMFNNAGIS---GSGGSITSLNMEDVKFLLSVNLNGI 125
           V+ +E+++     +   W G+LD + ++   +      G     + +   FL +++++  
Sbjct: 61  VSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKG--FLKALDISAY 117

Query: 126 -LHGI-KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY---SLSKEAIIGLARSTACE 180
            L  + K A   M  G   GSI+  S   +         Y    ++K A+    R  A E
Sbjct: 118 SLVSLAKAALPIMNPG---GSIVTLSYLGSER---VVPGYNVMGVAKAALESSVRYLAYE 171

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL-LRGRSASIED 239
           LG+ GIRVN IS   + +           G          KM+  S      GR+ + E+
Sbjct: 172 LGRKGIRVNAISAGPIKT-------LAASGITGFD-----KMLEYSEQRAPLGRNVTAEE 219

Query: 240 VAQAALFLASEEAGFITAHNLVIDGGY 266
           V   A FL S+ +  IT   + +DGGY
Sbjct: 220 VGNTAAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 9/185 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGR--YIHCDVT 71
             A+ITG + GIG ATA  FA+ G  + +     D L+ L A L ST G +      D++
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDLS 65

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             E +   +   +   G  D++ NNAG+    G +  + + D ++++ +NL  +      
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGM-AYTGPLLEMPLSDWQWVIQLNLTSVFQCCSA 124

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
               M   +  G II  SS AA        AY +SK A+    +  A E   HGIRV  I
Sbjct: 125 VLPGMRA-RGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 192 SPHGV 196
           +   V
Sbjct: 184 TLGAV 188

Length = 241

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 8/176 (4%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHCDVTK 72
           VA + G   G+GAA A+ FA  G  + +A      L+ L   +    GG    +  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E++V +   L     G L+++  NAG +     I        + +  +   G     + A
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG-ANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           AK M+   R G+II T ++A++ G     A++ +K A+  LA+S A ELG  GI V
Sbjct: 120 AKRMLARGR-GTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 8e-18
 Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 58/285 (20%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA--------DILDELGAALASTIGGRY 65
              GK  V+ GG  GI    A+ FA  GA++ +A          + +L  A    +G   
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLG--- 62

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG----SITSLNMEDVKFLLSVN 121
           +  DV     VE+A        G +D++     +SG+ G        ++    K ++ ++
Sbjct: 63  VSADVRDYAAVEAAFAQIADEFGPIDVL-----VSGAAGNFPAPAAGMSANGFKTVVDID 117

Query: 122 LNGILHGIKHAAKAMIEGQRK--GSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTA 178
           L G  + +K A   +    R+   SII  S+  A +   + +H    +K  +  L R+ A
Sbjct: 118 LLGTFNVLKAAYPLL----RRPGASIIQISAPQAFVPMPMQAHV-CAAKAGVDMLTRTLA 172

Query: 179 CELGKHGIRVNCISPHGV----------PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
            E G  GIRVN I P  +          PS  L  A  +                    S
Sbjct: 173 LEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQ--------------------S 212

Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSM 273
           +   R+ + +D+A AALFLAS+ A +IT   L +DGG++ G +S+
Sbjct: 213 VPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGWSLGGASI 257

Length = 264

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 31/210 (14%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIV-----------IADILDELGAALASTIGG 63
           L  ++ ++TG   GIG   A  +A +GA ++           + D ++  G    +    
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPA---- 65

Query: 64  RYIHCD---VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSV 120
             I  D    T +   + A  +   + G+LD + +NAG+ G  G +   + E  + ++ V
Sbjct: 66  -IIPLDLLTATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQV 123

Query: 121 NLNG--ILHGIKHAAKAMIEGQRK---GSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
           N+N   +L       +A++    K    S++ TSSS    G     AY++SK A  G+ +
Sbjct: 124 NVNATFML------TQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQ 177

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAY 205
             A E     +RVNCI+P G  + M  +A+
Sbjct: 178 VLADEYQGTNLRVNCINPGGTRTAMRASAF 207

Length = 247

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 24/210 (11%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI--GG---RYIHCDVT 71
           KVA++TG  RGIG    +  A++G   VI    D E G A    +   G   R+   DVT
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            +  +E+A        G LDI+ NNAGI+  G   ++   E  +  +  N      G   
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTN----FFGTVD 116

Query: 132 AAKAMIEGQRK---GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
             +A++   +K   G I+  SS    +G L S AY +SK A+  L R  A EL + GI+V
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSS---GLGSLTS-AYGVSKAALNALTRILAKELKETGIKV 172

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEE 218
           N   P  V ++M          KA   PEE
Sbjct: 173 NACCPGWVKTDM--GGG-----KAPKTPEE 195

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.1 bits (193), Expect = 4e-17
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHC--DVT 71
           K  +ITG + GIG ATA+ FA+ GA +++     + L EL   L +    + +    DV+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 72  KEEDVESAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
             E +E+A+  L   ++  +DI+ NNAG++         ++ED + ++  N+ G+L+  +
Sbjct: 61  DRESIEAALENLPEEFR-DIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                MI  + +G II   S A        + Y  +K A+   + +   +L   GIRV  
Sbjct: 120 LILPIMIA-RNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTN 178

Query: 191 ISPHGVPSE 199
           I P  V +E
Sbjct: 179 IEPGLVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.4 bits (194), Expect = 4e-17
 Identities = 70/268 (26%), Positives = 99/268 (36%), Gaps = 62/268 (23%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA------------DILDELGAALASTIGGR 64
           GKV VITG   GIG  TA+  A+ GAH++IA            +I  E G A        
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVE----- 55

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN--- 121
            I  D++    V       ++   +LDI+ NNAGI      +T    E      +VN   
Sbjct: 56  VIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFE---LQFAVNYLG 112

Query: 122 ---LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--------------AYS 164
              L  +L  +       ++      I+  SS A   G +  +              AY 
Sbjct: 113 HFLLTNLLLPV-------LKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYG 165

Query: 165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR 224
            SK A I   R  A  L   G+ VN + P  V +E+L      +L    ++P    K   
Sbjct: 166 QSKLANILFTRELARRLEGTGVTVNALHPGVVRTELLRRNGSFFLLYKLLRP--FLKK-- 221

Query: 225 DSGSLLRGRSASIEDVAQAALFLASEEA 252
                      S E  AQ AL+ A+   
Sbjct: 222 -----------SPEQGAQTALYAATSPE 238

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 6e-16
 Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 15/182 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-----YI 66
              L G V VITG + GIG ATA+ FA  GA +V+A   +E   A+A            +
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVV 61

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DVT  + V++    A S+ G++D+  NN G+ G+ G      +E  + ++  NL G +
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGV-GAVGRFEETPIEAHEQVIQTNLIGYM 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH----AYSLSKEAIIGLARSTACELG 182
               HAA  + + Q  G  I   S     GG A+     AYS SK  + G + +   EL 
Sbjct: 121 RD-AHAALPIFKKQGHGIFINMISL----GGFAAQPYAAAYSASKFGLRGFSEALRGELA 175

Query: 183 KH 184
            H
Sbjct: 176 DH 177

Length = 330

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 60/215 (27%), Positives = 86/215 (40%), Gaps = 20/215 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHCDV 70
           LTG   +ITGG  GIG A A+ F E G  ++I     + L E    L +      I  DV
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNI---HTIVLDV 59

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI---LH 127
              E VE+     +S    LDI+ NNAGI         +++ D    L      I   L 
Sbjct: 60  GDAESVEALAEALLSEYPNLDILINNAGIQ------RPIDLRDPASDLDKADTEIDTNLI 113

Query: 128 GIKHAAKAMIEG---QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           G     KA +     Q + +I+  SS  A +   A+  Y  +K A+     +   +L   
Sbjct: 114 GPIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDT 173

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLG-KADMKPEE 218
           G+ V  I P  V +E+         G    M  +E
Sbjct: 174 GVEVVEIVPPAVDTELHEERRNPDGGTPRKMPLDE 208

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 13/193 (6%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGG--RYIHCDV 70
           G  AV+TG   GIG A A+  A+ G ++++     + LD +   +    G   + I  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMF--NNAGISGS-GGSITSLNMEDVKFLLSVNLNGILH 127
           +  +D+   +   +     LDI    NN GIS S          ++++ +++VN+   L 
Sbjct: 61  SAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +     M++ ++KG+I+  SS A ++       YS SK  +   +R+   E    GI 
Sbjct: 118 MTRLILPGMVK-RKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGID 176

Query: 188 VNCISPHGVPSEM 200
           V  + P+ V ++M
Sbjct: 177 VQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----------GGR 64
           L+GK   ITG +RGIG A A   A +GA+IVIA    E    L  TI          GG+
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 65  Y--IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG-ISGSGGSITSLNMEDVKFLLSVN 121
              +  DV  E+ V +AV  AV   G +DI  NNA  I+ +G       M+    +  +N
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG--TEDTPMKRFDLMQQIN 121

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--LASH-AYSLSKEAIIGLARSTA 178
           + G    +  A    ++      I+ T S    +     A H AY+++K  +       A
Sbjct: 122 VRGT-FLVSQACLPHLKKSENPHIL-TLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLA 179

Query: 179 CELGKHGIRVNCISP 193
            E    GI VN + P
Sbjct: 180 EEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 62/262 (23%)

Query: 33  TAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           TA+L    GA ++  D   E G  L       +I  D+     +++AV    +  G++D 
Sbjct: 1   TARLLRFLGARVIGVDR-REPGMTLDG-----FIQADLGDPASIDAAVA---ALPGRIDA 51

Query: 93  MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA 152
           +FN AG+ G+           V+ +  VN      G++H  +A++     G  I   +S 
Sbjct: 52  LFNIAGVPGTA---------PVELVARVNF----LGLRHLTEALLPRMAPGGAIVNVASL 98

Query: 153 AIMG----------------------GLASHA------YSLSKEAIIGL-ARSTACELGK 183
           A                          LA+H       Y LSKEA+I    R      G 
Sbjct: 99  AGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGA 158

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIRVNC++P  V + +L   +R  LG      E V     DS +   GR A+ ++ A  
Sbjct: 159 RGIRVNCVAPGPVFTPIL-GDFRSMLG-----QERV-----DSDAKRMGRPATADEQAAV 207

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
            +FL S+ A +I   NL +DGG
Sbjct: 208 LVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 66/271 (24%), Positives = 104/271 (38%), Gaps = 38/271 (14%)

Query: 15  LTGKVAVITGGAR--GIGAATAKLFAENGAHIVI-----------ADILDELGAALASTI 61
           L  K+A++TG +R  GIGAA  +  A  G  I               + D+    L   I
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 62  GGRYIHC-----DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF 116
               + C     D+++               G   I+ NNA  S     +  L  E +  
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT-RLEELTAEQLDK 121

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLAR 175
             +VN+   +      AK   +G+  G II   +S   +G +    AY+ +K AI    +
Sbjct: 122 HYAVNVRATMLLSSAFAKQY-DGKAGGRII-NLTSGQSLGPMPDELAYAATKGAIEAFTK 179

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           S A EL + GI VN ++P    +  +    + +L                     +GR  
Sbjct: 180 SLAPELAEKGITVNAVNPGPTDTGWITEELKHHL----------------VPKFPQGRVG 223

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
              D A+   FL SEEA +IT   +  +GG+
Sbjct: 224 EPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 72.6 bits (178), Expect = 5e-15
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAAL--ASTIGGRYIHC 68
           L+GK+A  T  ++GIG   A++ A  GA +++     + L +    +   S +   YI  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMED----VKFLLSVNLNG 124
           D+TK ED+E  V+  +   G+ DI F + G     G    ++MED    VK L       
Sbjct: 66  DLTKREDLERTVK-ELKNIGEPDIFFFSTG-GPKPGYFMEMSMEDWEGAVKLL------- 116

Query: 125 ILHGIKHAAKAMIEG-QRKG-SIICTSSSAAIMGGLASHAYS-LSKEAIIGLARSTACEL 181
            L+   +  +A++   +RKG   I  S+S AI   + + A S + + ++ GL R+ A EL
Sbjct: 117 -LYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKEL 175

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
           G  GI VN I P  + ++ ++   +    +     EE  +       L  GR    E++ 
Sbjct: 176 GPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL--GRLGEPEEIG 233

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
               FLAS+   +I    + +DGG
Sbjct: 234 YLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 72.4 bits (177), Expect = 6e-15
 Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 41/270 (15%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDE--------------LGA 55
           L GKVA++TG +RGIG A AK  A +GA + I      +  +E              +GA
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 56  ALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
            L S  G   ++  +  E    +          + DI+ NNAGI G G  I     +   
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTG-------STKFDILINNAGI-GPGAFIEETTEQFFD 113

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
            ++SVN       I+ A   + +  R   II  SS+A  +      AYS++K AI  +  
Sbjct: 114 RMVSVNAKAPFFIIQQALSRLRDNSR---IINISSAATRISLPDFIAYSMTKGAINTMTF 170

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           + A +LG  GI VN I P  + ++M           A++  + + K    + S    R  
Sbjct: 171 TLAKQLGARGITVNAILPGFIKTDM----------NAELLSDPMMKQYATTISAF-NRLG 219

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            +ED+A  A FLAS ++ ++T   + + GG
Sbjct: 220 EVEDIADTAAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 71.7 bits (176), Expect = 8e-15
 Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 13/215 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIH---CDVT 71
           +  K  ++TG  RGIG A  +    +GA  V A + D   AA      G  +     DVT
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             E +++A   A      +D++ NNAG+      +    +E +K  + VN+ G+L  +  
Sbjct: 61  DPESIKAAAAQA----KDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR-LAQ 115

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A   +++    G+I+  +S A++    A   YS SK A   L +    EL   G  V  +
Sbjct: 116 AFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSV 175

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS 226
            P  + + M   A     G     PE V + V  +
Sbjct: 176 HPGPIDTRMAAGA-----GGPKESPETVAEAVLKA 205

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 9/212 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIH-C 68
            LTGK  ++TG + GIG A A+ FA  GA +V      D+LD +   +    G      C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN-MEDVKFLLSVNLNGILH 127
           D++  + V++ V       G +DI+ NNAG S       SL+   DV+  + +N    L 
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLR 156

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGI 186
            I+  A  M+E +  G II  ++   +         Y+ SK A+  ++R    E G  G+
Sbjct: 157 LIRGLAPGMLE-RGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGV 215

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEE 218
               +    V + M+    + Y G   +  +E
Sbjct: 216 HSTTLYYPLVATPMIAPT-KAYDGLPALTADE 246

Length = 293

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 76/276 (27%), Positives = 116/276 (42%), Gaps = 26/276 (9%)

Query: 1   MEARDDTNKLSSK---RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA- 56
           M+ + D  + S K   RL G+ A+ITG   GIG ATA  FA  GA I +  + +E   A 
Sbjct: 36  MQPKPDHGEQSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAA 95

Query: 57  ----LASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN 110
               L    G + +    D+  E      V  AV   G LDI+ N AG   +   I  + 
Sbjct: 96  EVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADIT 155

Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
            E        N+  +    K A   +  G    SII T S  +         Y+ +K AI
Sbjct: 156 TEQFDATFKTNVYAMFWLCKAAIPHLPPG---ASIINTGSIQSYQPSPTLLDYASTKAAI 212

Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           +   ++ A ++ + GIRVN ++P  V +          L  +  +P E    + D GS  
Sbjct: 213 VAFTKALAKQVAEKGIRVNAVAPGPVWTP---------LQPSGGQPPE---KIPDFGSET 260

Query: 231 -RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              R     ++A   + LAS+E+ ++T     + GG
Sbjct: 261 PMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 35/260 (13%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCD 69
           RL GK   I G + G+G A A    + GA + I     + L  +   L+      Y+  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL---LSVNLNGIL 126
           V+  E   + +  A      +D      G+  + G      +E+   L   L+ ++   L
Sbjct: 62  VSSTESARNVIEKAAKVLNAID------GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPL 115

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHG 185
           + +  + + + EG    SI+  SS + I        +Y+++K  +       A EL   G
Sbjct: 116 YAVNASLRFLKEGS---SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRG 172

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I+P  +                D +PE   K +R  G       A  ED A+  +
Sbjct: 173 IRVNGIAPTTI--------------SGDFEPERNWKKLRKLGD----DMAPPEDFAKVII 214

Query: 246 FLASEEAGFITAHNLVIDGG 265
           +L ++EA ++    + +DGG
Sbjct: 215 WLLTDEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 22/180 (12%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVT 71
           GKV ++TG  RGIG A  +     GA  V A     + + +LG  +        +  DVT
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVP------LQLDVT 59

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
               V +A   A      + I+ NNAGI  +G  +   + + ++  +  N  G L     
Sbjct: 60  DPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL----A 111

Query: 132 AAKA---MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            A+A   ++     G+I+   S  + +       YS SK A   L ++   EL   G RV
Sbjct: 112 MARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRV 171

Length = 238

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 70.8 bits (173), Expect = 3e-14
 Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 23/262 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG-----AALASTIGGR-- 64
           S RL  + A++TGG  GIG A A  +A  GA + I+ +  E         +    G +  
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAV 103

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  D++ E+   S V  A    G LDIM   AG   +   I  L  E  +   ++N+  
Sbjct: 104 LLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFA 163

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            L  +   A  ++   +  SII TSS  A         Y+ +K AI+  +R  A ++ + 
Sbjct: 164 -LFWLTQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQA 243
           GIRVN ++P  + + + ++           + ++          + R G+ A   ++A  
Sbjct: 221 GIRVNIVAPGPIWTALQISG---------GQTQDKIPQFGQQTPMKRAGQPA---ELAPV 268

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
            ++LAS+E+ ++TA    + GG
Sbjct: 269 YVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 61/186 (32%), Positives = 82/186 (44%), Gaps = 16/186 (8%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA---ALASTIGGRY--IHCDVTK 72
           K  +ITG   G G   AK     G   V+A  L + G     L      R   +  DVTK
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLG-FTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTK 59

Query: 73  EEDVESA---VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
            E ++ A   V+  V  KG L  + NNAGI G GG    L M+D +  + VNL G +   
Sbjct: 60  PEQIKRAAQWVKEHVGEKG-LWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVE-- 116

Query: 130 KHAAKAMIEGQR--KGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
               KA +   R  KG ++  SS    +   A  AY  SK A+   + S   EL   G++
Sbjct: 117 --VTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVK 174

Query: 188 VNCISP 193
           V+ I P
Sbjct: 175 VSIIEP 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 6e-14
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 34/237 (14%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRYIHCDVTK 72
             A+ITG +RGIGAA A+  A    H ++     A+ LDEL A L    G      D+T 
Sbjct: 4   PTALITGASRGIGAAIARELAP--THTLLLGGRPAERLDELAAELP---GATPFPVDLTD 58

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            E + +    AV   G+LD++ +NAG++   G +    +++ +  L VN+       +  
Sbjct: 59  PEAIAA----AVEQLGRLDVLVHNAGVA-DLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHA----YSLSKEAIIGLARS-TACELGKHGIR 187
             A+      G ++  +S A    GL ++     Y+ SK A+  LA +    E G   +R
Sbjct: 114 LPALRAAH--GHVVFINSGA----GLRANPGWGSYAASKFALRALADALREEEPGN--VR 165

Query: 188 VNCISPHGVPSEML--VNAY--RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           V  + P    ++M   + A    +Y  +  ++PE V K VR   ++     A I +V
Sbjct: 166 VTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRF--AVDAPPDAHITEV 220

Length = 227

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 14/185 (7%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG-AALASTIGGRYIH--CDVTK 72
           + K  +ITG + G G A A+     G H V+  +  E   A   +    R +    DVT 
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAG-HRVVGTVRSEAARADFEALHPDRALARLLDVTD 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            + +++ V  A +  G +D++ NNAG  G  G+I    + +++    VN+ G +   K  
Sbjct: 62  FDAIDAVVADAEATFGPIDVLVNNAGY-GHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHA----YSLSKEAIIGLARSTACELGKHGIRV 188
              M   +R+G I+  +S    MGGL +      Y  SK A+ G++ S A E+   GI V
Sbjct: 121 LPGMRA-RRRGHIVNITS----MGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175

Query: 189 NCISP 193
             + P
Sbjct: 176 TAVEP 180

Length = 277

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 67.3 bits (164), Expect = 3e-13
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 33/267 (12%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA------------DILDELGAALASTIG 62
           ++ ++A +TGG  GIG +  +   ++G  +V              +    LG    ++ G
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG 60

Query: 63  GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
                 +V   +  ++A     +  G++D++ NNAGI+        +  ED   ++  NL
Sbjct: 61  ------NVGDWDSTKAAFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWTAVIDTNL 113

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
             + +  K     M+E +  G II  SS     G      YS +K  I G   S A E+ 
Sbjct: 114 TSLFNVTKQVIDGMVE-RGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA 172

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
             G+ VN +SP  + ++M+         KA ++P+ + K+V    ++   R  S +++  
Sbjct: 173 TKGVTVNTVSPGYIGTDMV---------KA-IRPDVLEKIV---ATIPVRRLGSPDEIGS 219

Query: 243 AALFLASEEAGFITAHNLVIDGGYTTG 269
              +LASEE+GF T  +  ++GG   G
Sbjct: 220 IVAWLASEESGFSTGADFSLNGGLHMG 246

Length = 246

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 68/250 (27%), Positives = 98/250 (39%), Gaps = 29/250 (11%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHCDVTKEEDV 76
           ++ GG+ GIG A A+ FA  GA + IA    D L     AL      R    D+T E  V
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAV 60

Query: 77  ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
           ++    A    G  D +   A     GG + +L +   +  +     G        A+A 
Sbjct: 61  DAFFAEA----GPFDHVVITA-ADTPGGPVRALPLAAAQAAMDSKFWGAY----RVARAA 111

Query: 137 IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGV 196
                 GS+   S  AA+    +         A+  LAR  A EL    +RVN +SP  V
Sbjct: 112 RIAPG-GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLV 168

Query: 197 PSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQAALFLASEEAGFI 255
            + +           + +  +    M    +  L   R    EDVA A LFLA    GF 
Sbjct: 169 DTPLW----------SKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFT 216

Query: 256 TAHNLVIDGG 265
           T   +++DGG
Sbjct: 217 TGSTVLVDGG 226

Length = 230

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 53/250 (21%), Positives = 96/250 (38%), Gaps = 33/250 (13%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA--HIVIA---------DILDELGAALASTIGGRYI 66
            V +ITG + GIG   A   A + +    V A          + +  GA    T+    +
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTL--ETL 58

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV   + V +AV         +D++  NAG+ G  G + +L+ + +  +  VN+ G +
Sbjct: 59  QLDVCDSKSVAAAVERVTE--RHVDVLVCNAGV-GLLGPLEALSEDAMASVFDVNVFGTV 115

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             ++     M + +  G I+ TSS   + G   +  Y  SK A+ GL  S A +L    +
Sbjct: 116 RMLQAFLPDM-KRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPE------EVCKMVRD-----SGSLLRGRSA 235
            ++ I    V +  +          +  +                     S  + R  + 
Sbjct: 175 HLSLIECGPVHTAFMEKVLG-----SPEEVLDRTADDITTFHFFYQYLAHSKQVFREAAQ 229

Query: 236 SIEDVAQAAL 245
           + E+VA+  L
Sbjct: 230 NPEEVAEVFL 239

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 68/279 (24%), Positives = 108/279 (38%), Gaps = 55/279 (19%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIV-----------IADILDELGAALASTI 61
           L GK  +I G A  R I    AK  AE GA +            + ++ +ELG+ L    
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV--- 60

Query: 62  GGRYIHCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFL 117
               + CDVT +E +++    +   W G+LD + ++   +      G     + E     
Sbjct: 61  ----LPCDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIA 115

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEA 169
           + ++        K A   M  G   GSI+  +   +        +MG        ++K A
Sbjct: 116 MDISAYSFTALAKAARPLMNNG---GSILTLTYLGSERVVPNYNVMG--------VAKAA 164

Query: 170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL 229
           +    R  A +LGK GIRVN IS             R           ++ K    +  L
Sbjct: 165 LEASVRYLAADLGKEGIRVNAIS---------AGPIRTLAASGIGDFRKMLKENEANAPL 215

Query: 230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
              R+ +IE+V   A FL S+ +  IT   + +D GY  
Sbjct: 216 --RRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHI 252

Length = 259

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 75/281 (26%), Positives = 114/281 (40%), Gaps = 54/281 (19%)

Query: 13  KRLTGKVAVITGGAR--GIGAATAKLFAENGAHI----------------------VIAD 48
            +L  KVAV+TG +R  GIGAA  K  AE GA I                       + +
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 49  ILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITS 108
            L + G  ++S      +  D+T+ +  +  +       G   I+ NNA  S +    ++
Sbjct: 62  ELLKNGVKVSS------MELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNND-FSN 114

Query: 109 LNMEDVKFLLSVNLNG-ILHGIKHAAKAMIEGQRKGSIICTSS--SAAIMGGLASHAYSL 165
           L  E++     VN+    L   + A     + +  G II  +S      M G    AY+ 
Sbjct: 115 LTAEELDKHYMVNVRATTLLSSQFAR--GFDKKSGGRIINMTSGQFQGPMVG--ELAYAA 170

Query: 166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
           +K AI  L  S A E+   GI VN I+P    +  +    ++ L    M P         
Sbjct: 171 TKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGL--LPMFP--------- 219

Query: 226 SGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
                 GR    +D A+   FLASEEA +IT   +  +GG+
Sbjct: 220 -----FGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 64.2 bits (156), Expect = 1e-12
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GG--RYIHC 68
           +L GKVA++TGG  GIG  TA L A+ GA +++ DI  E G A    I   GG   ++  
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSY 72

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGI 99
           D+ K+ D +  + + ++   ++D++F NAG+
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 12/185 (6%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA--------DILDELGAALASTIGGRYIHC 68
            K+A++TG + G G  T    A+ G ++VIA        + L      L      +    
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKG-YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT +  + +  +L +   G++D++ NNAG + +GG +  + +E+ +     N+ G +  
Sbjct: 62  DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYA-NGGFVEEIPVEEYRKQFETNVFGAISV 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +     M + Q+ G II  SS +  +G      Y  SK A+ G + S   EL   GI V
Sbjct: 120 TQAVLPYMRK-QKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDV 178

Query: 189 NCISP 193
             I P
Sbjct: 179 ALIEP 183

Length = 280

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 64.6 bits (157), Expect = 3e-12
 Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 54/282 (19%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-LASTIGGRYIHCDVTKEEDVE 77
            AV+TG A+ IG++ A    + G  +V+        A+ LA+ +  R  +  VT + D+ 
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 78  SAVRLAVSWK----------GQLDIMFNNA----------GISGSGGSITSLNMEDVKFL 117
           ++  L    +          G+ D++ NNA          G +G G          V  L
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---------GLASHAYSLSKE 168
              N       IK    A  + Q        S++ +I+           L    Y+++K 
Sbjct: 123 FGSNAIAPYFLIK----AFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH 178

Query: 169 AIIGLARSTACELGKHGIRVNCISPHGV---PSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
           A+ GL RS A EL    IRVN ++P G+   P  M               P EV +  R 
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAP-GLSLLPDAM---------------PFEVQEDYRR 222

Query: 226 SGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              L + R AS E +A   +FL S +A +IT   + +DGG +
Sbjct: 223 KVPLGQ-REASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 12/194 (6%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHC--- 68
           T +  +ITG + G+GA  A+ FA  G  + +     D L+EL A L +   G  +     
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAAL 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV   + V           G LD +  NAGI G G  + +      K     N    L  
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAGI-GKGARLGTGKFWANKATAETNFVAALAQ 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELGKHGI 186
            + AA  +   Q  G ++  SS +A + GL     AY+ SK  +  L      EL K  I
Sbjct: 120 CE-AAMEIFREQGSGHLVLISSVSA-VRGLPGVKAAYAASKAGVASLGEGLRAELAKTPI 177

Query: 187 RVNCISPHGVPSEM 200
           +V+ I P  + SEM
Sbjct: 178 KVSTIEPGYIRSEM 191

Length = 248

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 66/267 (24%), Positives = 101/267 (37%), Gaps = 29/267 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI---------ADILDELGAALASTIGGRY 65
           L GKV +I GGA+ +G   A+  A  GA  V          AD  + + A  A+      
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
              D+T    VE     A +  G+ DI  N  G       I  ++  +   + +VN    
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVG-KVLKKPIVEISEAEYDEMFAVNSKSA 124

Query: 126 LHGIKHAAKAMIEGQRKGSI--ICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
              IK A + + +    G I  + TS   A     +  AY+ SK  +    R+ + E G 
Sbjct: 125 FFFIKEAGRHLNDN---GKIVTLVTSLLGAFTPFYS--AYAGSKAPVEHFTRAASKEFGA 179

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC--KMVRDSGSLLRGRSASIEDVA 241
            GI V  + P  + +                  E V   K         +     IED+ 
Sbjct: 180 RGISVTAVGPGPMDTPFFYPQ---------EGAEAVAYHKTAAALSPFSKTGLTDIEDIV 230

Query: 242 QAALFLASEEAGFITAHNLVIDGGYTT 268
               FL + +  +IT   ++I+GGYTT
Sbjct: 231 PFIRFLVT-DGWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 15/200 (7%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHI-VIADILDELGAALASTIGGRY-IHC---DV 70
             KV  ITG + GIG A A+ +A  GA + ++A   D L  A A+ +     +     DV
Sbjct: 2   PLKV-FITGASSGIGQALAREYARQGATLGLVARRTDAL-QAFAARLPKAARVSVYAADV 59

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL---LSVNLNGILH 127
              + + +A    ++  G  D++  NAGIS   G++T    ED+      +  N  G++ 
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGISV--GTLTE-EREDLAVFREVMDTNYFGMVA 116

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +     M    R+G+++  +S A + G   + AYS SK A I    S   EL   G+R
Sbjct: 117 TFQPFIAPMR-AARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVR 175

Query: 188 VNCISPHGVPSEML-VNAYR 206
           V  I+P  + + M   N Y 
Sbjct: 176 VVTIAPGYIRTPMTAHNPYP 195

Length = 257

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 72/264 (27%), Positives = 114/264 (43%), Gaps = 25/264 (9%)

Query: 15  LTGKVAVITG--GARGIGAATAKLFAENGAHIV---IADILDELGAALASTIGGRYIH-C 68
           L GK  +ITG    R I    AK   E GA +    + D L+E    +A+ +    +  C
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRC 63

Query: 69  DVTKEEDVESA-VRLAVSWKGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNLN 123
           DV  ++++      L   W G LD + ++ G +     SG  + S++ E       ++  
Sbjct: 64  DVASDDEINQVFADLGKHWDG-LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
             L  +  AA+ M+ G R  +I+  S   A+      +   ++K ++    R TA  LGK
Sbjct: 123 S-LPALAKAARPMMRG-RNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGK 180

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIR N IS    P + L  +     GK       +   V     L   R+ +IE+V   
Sbjct: 181 EGIRCNGISAG--PIKTLAASGIADFGK-------LLGHVAAHNPL--RRNVTIEEVGNT 229

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A FL S+ +  IT     +DGGY+
Sbjct: 230 AAFLLSDLSSGITGEITYVDGGYS 253

Length = 261

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 67/271 (24%), Positives = 106/271 (39%), Gaps = 60/271 (22%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI--ADILDELGAALASTI---GGRYI--HCDV 70
           + A++TG AR IG A A   A +G  + +      DE   ALA+ I   G R +    D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADL 68

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
             E +V + V  A +  G + ++ NNA +     S  S         ++ NL       +
Sbjct: 69  ADEAEVRALVARASAALGPITLLVNNASLF-EYDSAASFTRASWDRHMATNLRAPFVLAQ 127

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASH--------------AYSLSKEAIIGLARS 176
             A+A+    R               GL  +              +Y+LSK A+    R+
Sbjct: 128 AFARALPADAR---------------GLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRT 172

Query: 177 TACELGKHGIRVNCISPHG--VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS 234
            A  L    IRVN I P G  +PS                 PE+  +      +   GR 
Sbjct: 173 LAQALAPR-IRVNAIGP-GPTLPSG-------------RQSPEDFARQHA---ATPLGRG 214

Query: 235 ASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           ++ E++A A  +L   +A  +T   + +DGG
Sbjct: 215 STPEEIAAAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 33/239 (13%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV 76
            +V ++ GG   +G+A  + F   G  +   D L E   A AS I         +  E  
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASID-LAENEEADASIIVLD----SDSFTEQA 55

Query: 77  ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN-MEDVKFLLSVNLNGILHGIKHAAKA 135
           +  V       G++D +   AG   +GGS  S + +++   +   NL         A K 
Sbjct: 56  KQVVASVARLSGKVDALICVAG-GWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATKH 114

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KHGIRVNCISP 193
           ++ G   G ++ T + AA+        Y  +K A+  L +S A E      G   N I P
Sbjct: 115 LLSG---GLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
             + +    N  RK +  AD                       +E +A+  LF AS  A
Sbjct: 172 VTLDTPA--N--RKAMPDAD-----------------FSSWTPLEFIAELILFWASGAA 209

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 22/196 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----------GGR 64
           L GK   ITG +RGIG A A   A +GA++VIA    E    L  TI          GG+
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 65  YIHC--DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
            + C  D+  E+ V +AV  AV   G +DI+ NNA  + S        M+    ++ VN 
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNAS-AISLTGTLDTPMKRYDLMMGVNT 119

Query: 123 NGILHGIKHAAKAMIEGQRKGSI--ICTSSSAAIMGG--LASH-AYSLSKEAIIGLARST 177
            G        +KA +   +K     I   S    +      +H AY+++K  +       
Sbjct: 120 RGTY----LCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGM 175

Query: 178 ACELGKHGIRVNCISP 193
           A E    GI VN + P
Sbjct: 176 AEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 23/138 (16%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI--------AD-ILDELGAA--LASTIGG 63
           L GK A++TG +RGIGA TAK+ A  GAH+V+        A+ ++ E+ AA   AS +G 
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
                D+T EE V + +  A    G LD +  NA    SGG  + +   D  + + +N +
Sbjct: 64  -----DLTDEESVAALMDTAREEFGGLDALVLNA----SGGMESGM---DEDYAMRLNRD 111

Query: 124 GILHGIKHAAKAMIEGQR 141
              +  + A   M  G R
Sbjct: 112 AQRNLARAALPLMPAGSR 129

Length = 248

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGRYIHCDVTKEE 74
           +A++T      G A+A+   E+G  +V  D       E   A  S   G         E+
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAER-QAFESENPG----TKALSEQ 57

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLL-SVNLNGILHGIKHAA 133
             E  V   +   G +D++ +N  I      I   +  D++    ++++      +  AA
Sbjct: 58  KPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFA--LLQAA 115

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            A ++    GSII  +S+      LA ++ Y  ++ A + LA S A EL +  I V  I 
Sbjct: 116 IAQMKKAGGGSIIFITSAVP-KKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIG 174

Query: 193 PHGVPSEMLVNAYRKYLGKADMK--PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           P+   S         Y   +D +  PE   ++ RD      GR    +++     FLAS 
Sbjct: 175 PNFFNSP-------TYFPTSDWENNPELRERVKRDVP---LGRLGRPDEMGALVAFLASR 224

Query: 251 EAGFITAHNLVIDGGYTT 268
            A  IT       GGY  
Sbjct: 225 RADPITGQFFAFAGGYLP 242

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 39/183 (21%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
            ++ G    IG A A+L + +G  ++            A    G Y   D+T E  +++ 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVIT-----------AGRSSGDY-QVDITDEASIKAL 48

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMED------VKFLLSVNLNGILHGIKHAA 133
                   G  D + + AG       +  L   D       K L  +NL  + HG+ +  
Sbjct: 49  FEKV----GHFDAIVSTAG-DAEFAPLAELTDADFQRGLNSKLLGQINL--VRHGLPYLN 101

Query: 134 KAMIEGQRKGSIICTSSSAA---IMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                    GSI  TS   A   I GG    A +    A+ G  R+ A EL + GIR+N 
Sbjct: 102 D-------GGSITLTSGILAQRPIPGGA---AAATVNGALEGFVRAAAIELPR-GIRINA 150

Query: 191 ISP 193
           +SP
Sbjct: 151 VSP 153

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 72/280 (25%), Positives = 111/280 (39%), Gaps = 59/280 (21%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYIH-- 67
           L GK  V+ G A  R I    A+     GA +V     + L++    LA T+ G+     
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 68  -CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK----------F 116
            CDVT +E++ +             I      I G    I   N ED++          F
Sbjct: 65  PCDVTSDEEITACFE---------TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGF 115

Query: 117 LLSVNLNGI-LHGIKHAAKA-MIEGQRKGSIICTS--------SSAAIMGGLASHAYSLS 166
           LL+ N++   L  +   AK  M EG   GSI+  +         +  +MG        ++
Sbjct: 116 LLAQNISAYSLTAVAREAKKLMTEG---GSIVTLTYLGGERVVQNYNVMG--------VA 164

Query: 167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS 226
           K ++    +  A +LGK GIRVN IS   +         R    K       + K + + 
Sbjct: 165 KASLEASVKYLANDLGKDGIRVNAISAGPI---------RTLSAKGVGGFNSILKEIEER 215

Query: 227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             L R  +   E+V   A FL S+ +  +T  N+ +D GY
Sbjct: 216 APLRRTTTQ--EEVGDTAAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 68/285 (23%), Positives = 115/285 (40%), Gaps = 58/285 (20%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIH---CDVTK 72
           +V V+ G A GIG A A+     G  +++AD  +E   A A T+   G  +     DV+ 
Sbjct: 3   EVVVVIG-AGGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            E V++    A +  G +  + + AG+S S  S  ++        L V+L G    ++  
Sbjct: 61  RESVKALAATAQTL-GPVTGLVHTAGVSPSQASPEAI--------LKVDLYGTALVLEEF 111

Query: 133 AKAMIEGQRKGSIICTSS---------SAAIMGGLAS---------------------HA 162
            K +  G   G+ +  +S         +A     LA+                     HA
Sbjct: 112 GKVIAPG---GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHA 168

Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y ++K A      + A + G+ G R+N ISP  + + +  +      G    +      M
Sbjct: 169 YQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRG-DGYR-----NM 222

Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              S +   GR  + +++A  A FL      FIT  + ++DGG T
Sbjct: 223 FAKSPA---GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 6e-10
 Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCD 69
            L  K  ++TG + GIG A A+  A  GA +++    A+ L+ L A L      R++  D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +T E   E AV       G ++++ NNAG++     +   + E ++ LL++NL   +  +
Sbjct: 62  LTSEAGRE-AVLARAREMGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQ-L 118

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             A   ++  Q    ++   S+   +G  G AS  Y  SK A+ G + +   EL   G+R
Sbjct: 119 TRALLPLLRAQPSAMVVNVGSTFGSIGYPGYAS--YCASKFALRGFSEALRRELADTGVR 176

Query: 188 VNCISPHGVPSEM---LVNAYRKYLGKADMKPEEVCKMV 223
           V  ++P    + M    V A  + LG A   PE+V   V
Sbjct: 177 VLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAV 215

Length = 263

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 27/165 (16%)

Query: 16  TGKVAVITGGARGIGAATAKLFAEN-GAHIVI-------------ADILDELGAALASTI 61
            G V ++TGGA GIG A A+  A   GA +V+             A  L  L A      
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEAL----- 258

Query: 62  GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
           G R  YI  DVT    V   +       G +D + + AG+      +     ED + +L+
Sbjct: 259 GARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGV-LRDALLAQKTAEDFEAVLA 317

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS 164
             ++G+L+         +  +     +  SS +A  GG     Y+
Sbjct: 318 PKVDGLLNLA-----QALADEPLDFFVLFSSVSAFFGGAGQADYA 357

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 15/183 (8%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYI--HCDVTKEE 74
           A++ G + GIGAATA   A  G  + +     E    L   I   GG  +    DVT  +
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSG----GSITSLNMEDVKFLLSVNLNGILHGIK 130
            V+S V  A    G+++++     +SG+G    G +  ++ E  +  + ++L G      
Sbjct: 73  SVKSFVAQAEEALGEIEVL-----VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLAT 127

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                MIE +R G +I   S  A+       AY  +K  +  +  +   EL   G+R + 
Sbjct: 128 AVLPGMIERRR-GDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASI 186

Query: 191 ISP 193
           + P
Sbjct: 187 VHP 189

Length = 274

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 21/244 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHCD 69
           + TG   +ITGGA GIG A AK F E G  ++I     + L E  A            CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHT---EVCD 58

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGI------SGSGGSITSLNMEDVKFLLSVNLN 123
           V   +     V         L+++ NNAGI      +G+   +     E     ++ NL 
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IATNLL 113

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
             +         ++  Q + +II  SS  A +   ++  Y  +K AI     +   +L  
Sbjct: 114 APIRLTALLLPHLLR-QPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKD 172

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKAD--MKPEEVCKMVRDSGSLLRGRSASIEDVA 241
             + V  ++P  V +       R  +  +    + E++ +   D   +L  R  ++   +
Sbjct: 173 TSVEVIELAPPLVDTTEGNTQARGKMPLSAFISETEDLVQNTPDRKEILVERVENLRFAS 232

Query: 242 QAAL 245
           +   
Sbjct: 233 RNNF 236

Length = 245

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE- 74
           +G+VAV+TG   G+G  TA   A  GAH+V+A    + G A A+ I       DVT +E 
Sbjct: 15  SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 75  ---DVESAVRLAVSWKG---QLDIMFNNAGI 99
               + S    A + +    ++D++ NNAG+
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 56.5 bits (136), Expect = 3e-09
 Identities = 56/256 (21%), Positives = 93/256 (36%), Gaps = 47/256 (18%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV 80
           ++TGGA  IG+   +     G  +   D L +         G  ++  D+T  + V+   
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD--GLDPLLSGVEFVVLDLTDRDLVDELA 61

Query: 81  RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ 140
           +         D + + A  S    S  S    D    L VN++G L+ ++ A  A   G 
Sbjct: 62  KGVP------DAVIHLAAQSSVPDSNAS----DPAEFLDVNVDGTLNLLEAARAA---GV 108

Query: 141 RKGSIICTSSSAAIMGGLASH-------------AYSLSKEAIIGLARSTACELGKHGIR 187
           ++   +  SS + + G                   Y +SK A   L R+ A     +G+ 
Sbjct: 109 KR--FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYA---RLYGLP 163

Query: 188 V------NCISPHGVP--SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           V      N   P   P  S  +V+A+ + L K +         +   GS  R     ++D
Sbjct: 164 VVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIV-----IGGDGSQTRD-FVYVDD 217

Query: 240 VAQAALFLASEEAGFI 255
           VA A L       G +
Sbjct: 218 VADALLLALENPDGGV 233

Length = 314

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 10/202 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           +  +ITG + GIGA  A+    +G   V A    E   A     G      D  + E + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVAALEAEGLEAFQLDYAEPESIA 63

Query: 78  SAVRLAVSW-KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
           + V   +    G+LD +FNN G  G  G++  L  E ++     N  G     +     M
Sbjct: 64  ALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVM 122

Query: 137 IEGQRKGSIICTSSSAAIMGGLASH---AYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
            + Q +G I+  SS   I+G +      AY+ SK AI GL+ +   EL   GI V+ I P
Sbjct: 123 RK-QGQGRIVQCSS---ILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEP 178

Query: 194 HGVPSEMLVNAYRKYLGKADMK 215
             + +    NA   +    D++
Sbjct: 179 GPIETRFRANALAAFKRWIDIE 200

Length = 277

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 54/229 (23%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
            ++TGG+ GIG A A+  A  G+  V+                       V++       
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLV----------------------VSR------- 31

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
                      D++ +NA I   G  I       ++  +  N+ G    +  AA+ +++ 
Sbjct: 32  ----------RDVVVHNAAILDDGRLIDLTG-SRIERAIRANVVGTRR-LLEAARELMKA 79

Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
           +R G  I  SS A + G      Y+ SK A+ GLA+  A E   +G+    ++       
Sbjct: 80  KRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACG----- 134

Query: 200 MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
                    + K  + PEE+             R+   E+VA+A L   
Sbjct: 135 ---TWAGSGMAKGPVAPEEIL-----GNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 75/297 (25%), Positives = 112/297 (37%), Gaps = 95/297 (31%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVI-----------ADILDELGAALASTI 61
           L GK  ++ G A  + I    A+ F   GA + +             + +EL A +    
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPI---- 63

Query: 62  GGRYIHCDVTKEEDVESAV--RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK---- 115
              ++  DV +   +E AV  R+A  W G+LD + +         SI     ED+     
Sbjct: 64  ---FLPLDVREPGQLE-AVFARIAEEW-GRLDFLLH---------SIAFAPKEDLHGRVV 109

Query: 116 ------FLLS--VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLA 159
                 F L+  V+ +  +   + A   M  G   GS++  S   A        +MG + 
Sbjct: 110 DCSREGFALAMDVSCHSFIRMARLAEPLMTNG---GSLLTMSYYGAEKVVENYNLMGPV- 165

Query: 160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISP--------HGVPS--EMLVNAYRKYL 209
                  K A+    R  A ELG  GIRV+ ISP         G+     +L +A  +  
Sbjct: 166 -------KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAER-- 216

Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
                 P                R   I+DV   A FLAS+ A  +T + L IDGGY
Sbjct: 217 -----APL--------------RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 52.8 bits (127), Expect = 6e-08
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           L+GK A++TGG  G+G  T +  A+ GAH+++     ++     + I G  +   +    
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEV--VMLDLA 81

Query: 75  DVESAVRLAVSW---KGQLDIMFNNAGI 99
           D+ES    A  +     ++DI+ NNAG+
Sbjct: 82  DLESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 79/275 (28%), Positives = 113/275 (41%), Gaps = 46/275 (16%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELG----------AALASTIG 62
           LTGK A++TG A  R I    A+     GA + I  + DE G            L  ++ 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSL- 62

Query: 63  GRYIHCDVTKEEDVESAVR-LAVSWKGQLDIMFNN---AGISGSGGSITSLNMEDVKFLL 118
             ++ CDV  +  +E     +   W G+LDI+ +    AG     G  ++ + E     L
Sbjct: 63  --FLPCDVQDDAQIEETFETIKQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARAL 119

Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEAIIGLARST 177
            ++   +    K A   M EG   GSI+    +   +GG+ A   Y++   A   L  S 
Sbjct: 120 EISAYSLAPLCKAAKPLMSEG---GSIV----TLTYLGGVRAIPNYNVMGVAKAALEASV 172

Query: 178 ---ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM--KPEEVCKMVRDSGSLLRG 232
              A ELG   IRVN IS    P   L  A     G  DM    EE         + LR 
Sbjct: 173 RYLAAELGPKNIRVNAISAG--PIRTL--ASSAVGGILDMIHHVEEK--------APLR- 219

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           R+ +  +V   A FL S+ A  IT   + +D GY 
Sbjct: 220 RTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 35/165 (21%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA-HIVI-----------ADILDELGAALASTIGGRY 65
              +ITGG  G+G A A+  AE GA  +V+           A +L EL AA A       
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARV---TV 57

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV------KFLLS 119
           + CDV   + + + +    + +G L  + + AG+    G + SL  E        K   +
Sbjct: 58  VACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDD-GVLASLTPERFAAVLAPKAAGA 116

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHA 162
            NL        H              +  SS A ++G  G A++A
Sbjct: 117 WNL--------HEL---TADLPLDFFVLFSSIAGVLGSPGQANYA 150

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 12/181 (6%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           K  +ITG + GIG   A      G   V+A        A  +++G   I  D+   E VE
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYR-VLAACRKPDDVARMNSLGFTGILLDLDDPESVE 61

Query: 78  SAVR--LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
            A    +A++   +L  +FNNAG  G  G +++++ + ++   S N  G  H +      
Sbjct: 62  RAADEVIALT-DNRLYGLFNNAGF-GVYGPLSTISRQQMEQQFSTNFFGT-HQLTMLLLP 118

Query: 136 MIEGQRKGSIICTSSSAAIMGGLAS---HAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            +    +G I+ TSS   +MG +++    AY+ SK A+   + +   EL   GI+V+ I 
Sbjct: 119 AMLPHGEGRIVMTSS---VMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIE 175

Query: 193 P 193
           P
Sbjct: 176 P 176

Length = 256

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 49.0 bits (117), Expect = 8e-07
 Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 37/210 (17%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA--DIL--DELGAALASTIGGRYI---HCD 69
           GK  +ITG   GIG  TA+  A  GA +++A  D+   +E  A +        +   H D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV-------KFLLSVNL 122
           +   + + +     ++ + +LD++ NNAG+     S T    E          FLL+  L
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH------------AYSLSKEAI 170
             +L   K +A +         I+  SS A   G +               AY  SK A 
Sbjct: 121 LDLL---KKSAPS--------RIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLAN 169

Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEM 200
           +   R  A  L   G+ VN + P  V +E+
Sbjct: 170 VLFTRELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 71/274 (25%), Positives = 113/274 (41%), Gaps = 49/274 (17%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYI-HC 68
           + GK  +I G A  R I    AK     GA +      D L +    LA+ +G     HC
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHC 67

Query: 69  DVTKEEDVESAVR-LAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNG 124
           DVT E  +++    L   W G+LD + +  G S      G     + ++    + +++  
Sbjct: 68  DVTDEASIDAVFETLEKKW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYS 126

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLARS 176
                + A K M +G   GSI+  +   A        +MG        ++K A+    + 
Sbjct: 127 FTAVAQRAEKLMTDG---GSILTLTYYGAEKVMPHYNVMG--------VAKAALEASVKY 175

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD----MKPEEVCKMVRDSGSLLRG 232
            A +LG   IRVN IS    P + L  +     G  D    +K  E         + LR 
Sbjct: 176 LAVDLGPKNIRVNAISAG--PIKTLAAS-----GIGDFRYILKWNEY-------NAPLR- 220

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           R+ +IE+V  +AL+L S+ +  +T     +D GY
Sbjct: 221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254

Length = 272

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 4/190 (2%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
            V +ITG + GIG A A  F   G  +       E   ALA+  G   +  DV     + 
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAVQLDVNDGAALA 60

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
                  +  G LD++ NNAG  G+ G +    +E ++     N+  ++ G+  A   ++
Sbjct: 61  RLAEELEAEHGGLDVLINNAGY-GAMGPLLDGGVEAMRRQFETNVFAVV-GVTRALFPLL 118

Query: 138 EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVP 197
             + +G ++   S + ++    + AY  SK A+  L+ +   EL   G++V  + P  + 
Sbjct: 119 -RRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIA 177

Query: 198 SEMLVNAYRK 207
           S+   NA R+
Sbjct: 178 SQFASNASRE 187

Length = 274

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 16/186 (8%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCDVT 71
             K   ITG + G G    +     G  +       D LD+L A     +    +  DVT
Sbjct: 1   MSKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRL--WVLQLDVT 58

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
               V + V  A +  G++D++ +NAG  G  G+   L+   ++  +  NL G +  I+ 
Sbjct: 59  DSAAVRAVVDRAFAALGRIDVVVSNAGY-GLFGAAEELSDAQIRRQIDTNLIGSIQVIR- 116

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASH----AYSLSKEAIIGLARSTACELGKHGIR 187
           AA   +  Q  G I+  SS     GG  ++     Y  +K  I G   + A E+   GI 
Sbjct: 117 AALPHLRRQGGGRIVQVSS----EGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIE 172

Query: 188 VNCISP 193
              + P
Sbjct: 173 FTIVEP 178

Length = 276

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 41/224 (18%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVI--------------ADILDELGAALA 58
           K L GKVA++ G  RG G   A      GA + +               + ++E  A L 
Sbjct: 4   KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEET-AELV 62

Query: 59  STIGGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGS------GGSITSLN 110
           +  GGR I    D    E V + V      +G+LDI+ N+  I G       G  +   +
Sbjct: 63  TAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVND--IWGGEKLFEWGKPVWEHS 120

Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-------- 162
           ++    +L + ++  L     A   +I   R G ++       I  G A +         
Sbjct: 121 LDKGLRMLRLAIDTHLITSHFALPLLIR--RPGGLV-----VEITDGTAEYNATHYRLSV 173

Query: 163 -YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY 205
            Y L+K ++  LA S A EL  HG     ++P  + SEM+++A+
Sbjct: 174 FYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAF 217

Length = 305

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 34/189 (17%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTKE 73
             +ITG   GIG   A  +A+ G   VIA      +LDEL    A+     +   DVT  
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQSVLDELHTQSANIFTLAF---DVTDH 58

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISG--SGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
              ++A+          ++   NAG       G + +  M  V    +VN+ G+ + I+ 
Sbjct: 59  PGTKAALS---QLPFIPELWIFNAGDCEYMDDGKVDATLMARV---FNVNVLGVANCIEG 112

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASH-------AYSLSKEAIIGLARSTACELGKH 184
               +  G R            I+G +AS        AY  SK A+   AR+   +L   
Sbjct: 113 IQPHLSCGHR----------VVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPK 162

Query: 185 GIRVNCISP 193
           GI V  + P
Sbjct: 163 GIEVVTVFP 171

Length = 240

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 21/156 (13%)

Query: 21  VITGGARGIGAATAKLFAENGA-HIVI-----------ADILDELGAALASTIGGRYIHC 68
           ++TGG  G+G   A+  AE GA H+V+             +L EL  A  + +    + C
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAEL-EARGAEV--TVVAC 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV+  + V + +    +    L  + + AG+      + ++  ED   +L+  + G  + 
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRD-ALLANMTAEDFARVLAPKVTGAWN- 118

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS 164
             H A            +  SS A ++G      Y+
Sbjct: 119 -LHEATRDRPLDF---FVLFSSIAGVLGSPGQANYA 150

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 48/276 (17%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHCDVTKEEDV 76
           ++T  +RGIG   A+   + GA +VI+    + L++    L        +  D++ ++D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 77  ESAVRLAVSWKGQLDIMFNNAG-ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA--A 133
           ++ V+ A    G +D +  NAG +      +      D  +L +  L+ +  G       
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSD--WLEAALLHLVAPGYLTTLLI 121

Query: 134 KAMIEGQRKGSIICTSSSAAI--MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           +A +E + KG ++  SS +    M  L      +++  ++ LA+  +   G  GIR    
Sbjct: 122 QAWLEKKMKGVLVYLSSVSVKEPMPPLV--LADVTRAGLVQLAKGVSRTYGGKGIR---- 175

Query: 192 SPHGVPSEMLVNAYRKYLGKAD----------------MKPEEVC-KMVRDSGSLLRGRS 234
                       AY   LG  D                +  EE   + V +   L   R+
Sbjct: 176 ------------AYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL--KRT 221

Query: 235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGT 270
              E++     FL SE A ++    +V DG  T G 
Sbjct: 222 GRWEELGSLIAFLLSENAEYMLGSTIVFDGAMTRGV 257

Length = 259

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 43/210 (20%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-------RYIHCD 69
           GKV +ITG   GIG  TA+ FA +GAH+++A       +A  S I           +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV-------KFLLSVNL 122
           +     V+       +    L ++  NA +     ++T   +E          F L   L
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAI------MGGLASHAYSLSKE---AIIGL 173
             +L   + +A A +       I+ +S S          G L     S  K+   +++  
Sbjct: 121 EDVL---RRSAPARV-------IVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAY 170

Query: 174 ARSTAC----------ELGKHGIRVNCISP 193
            R+  C           L   GI  N + P
Sbjct: 171 NRAKLCNILFSNELHRRLSPRGITSNSLHP 200

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 11/178 (6%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTKEEDV 76
           +TG   G G    + F + G H VIA     + L EL   L   +       DV     +
Sbjct: 5   VTGATAGFGECITRRFIQQG-HKVIATGRRQERLQELKDELGDNL--YIAQLDVRNRAAI 61

Query: 77  ESAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           E  +  L   W+  +D++ NNAG++         ++ED + ++  N  G+++  +     
Sbjct: 62  EEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG 120

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           M+E    G II   S+A        + Y  +K  +   + +   +L    +RV  I P
Sbjct: 121 MVERNH-GHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Length = 248

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 17/197 (8%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIHCDVTK 72
           G  A++TG   GIG   A   A  G ++V+     D L ++  ++ S      I   V  
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 73  -EEDVESAV-RLAVSWKGQLD--IMFNNAGISGSGGS-ITSLNMEDVKFLLSVNLNGILH 127
              D++  V R+  + +G LD  ++ NN G+S         ++ E +K L+ VN+ G   
Sbjct: 113 FSGDIDEGVKRIKETIEG-LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTK 171

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH----AYSLSKEAIIGLARSTACELGK 183
             +     M++ ++KG+II   S AAI+  + S      Y+ +K  I   +R    E  K
Sbjct: 172 VTQAVLPGMLK-RKKGAIINIGSGAAIV--IPSDPLYAVYAATKAYIDQFSRCLYVEYKK 228

Query: 184 HGIRVNCISPHGVPSEM 200
            GI V C  P  V ++M
Sbjct: 229 SGIDVQCQVPLYVATKM 245

Length = 320

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 53/233 (22%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDVTKEED 75
           +ITG  + IG A A      G  ++++       +D L  A A       I  D +    
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQC-----IQADFSTNAG 60

Query: 76  VESAVRLAVSWKGQLDIMFNNAG--ISGSGGSITSLNMED-------VKFLLSVNLNGIL 126
           + + +         L  + +NA   ++   G+  +  +           +LL++ L  +L
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLL 120

Query: 127 HGIKHAAKAMI----EGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACEL 181
            G  HAA  +I        KGS                H AY+ SK A+  +  S A +L
Sbjct: 121 RGHGHAASDIIHITDYVVEKGS--------------DKHIAYAASKAALDNMTLSFAAKL 166

Query: 182 GKHGIRVNCISPHGVPSEMLVN-----AYR-KYLGKADMK----PEEVCKMVR 224
               ++VN I+    P+ +L N     AYR K L K+ +K     EE+  +V 
Sbjct: 167 APE-VKVNSIA----PALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVD 214

Length = 236

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 21  VITGGARGIGAATAKLFAENGA-HIVI----ADILDELGAALASTIGGRYIH---CDVTK 72
           +ITGG  G+G   A+  A  GA H+V+             A     GG  +    CDVT 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              + + +   ++  G L  + + AG+      +  L       +L+  + G L+   H 
Sbjct: 214 PAALAALLA-ELAAGGPLAGVIHAAGV-LRDALLAELTPAAFAAVLAAKVAGALN--LHE 269

Query: 133 AKAMIEGQRKGSIICTSSSAAIMG--GLASHA 162
               +        +  SS AA++G  G A++A
Sbjct: 270 LTPDLPLDF---FVLFSSVAALLGGAGQAAYA 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 18/192 (9%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           + A+I G +RG+G        E G   V A +           + G   H +     D  
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTALQALPGV--HIEKLDMNDPA 58

Query: 78  SAVRLAVSWKGQ-LDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           S  +L    +GQ  D++F NAGISG +  S       ++  L   N    +      A+ 
Sbjct: 59  SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI----RLARR 114

Query: 136 MIEGQRKGS-IICTSSSAAIMGGLASHA------YSLSKEAIIGLARSTACELGKHGIRV 188
           ++   R G  ++   SS   +G +          Y  SK A+  + RS   ELG+  + V
Sbjct: 115 LLGQVRPGQGVLAFMSS--QLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTV 172

Query: 189 NCISPHGVPSEM 200
             + P  V ++M
Sbjct: 173 LSMHPGWVKTDM 184

Length = 225

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 44/273 (16%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIV-------IADILDELGAALASTIGGRY 65
           L+GK  ++TG A    I    A+     GA +        +   ++E  A L S I    
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI---V 60

Query: 66  IHCDVTKEEDVESA-VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           + CDV ++  +++    L   W  + D   ++ G +         +  D  ++ +V   G
Sbjct: 61  LPCDVAEDASIDAMFAELGKVWP-KFDGFVHSIGFAPG-------DQLDGDYVNAVTREG 112

Query: 125 --ILHGIK-HAAKAMIEGQRK----GSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARS 176
             I H I  ++  AM +  R     GS + T S       + ++    L+K ++    R 
Sbjct: 113 FKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRY 172

Query: 177 TACELGKHGIRVNCIS--PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS 234
            A  +G  G+RVN IS  P    +   +  +RK L          C+ V    + +R R+
Sbjct: 173 MANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAH--------CEAV----TPIR-RT 219

Query: 235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            +IEDV  +A FL S+ +  I+   + +DGG++
Sbjct: 220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

Length = 262

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 13/128 (10%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG---GRY--IHCDVT 71
              VITG + G+G A AK  A  G  H+V+A          A  +G     Y  +HCD+ 
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN-------LNG 124
             + V   V         LD +  NA +            +  +  + VN        N 
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNL 121

Query: 125 ILHGIKHA 132
           +L  ++ +
Sbjct: 122 LLEDLQRS 129

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 77/293 (26%), Positives = 103/293 (35%), Gaps = 50/293 (17%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIAD---ILD------ELGAALAS---- 59
           LTGK+A I G    +G G   AK  AE GA I++     I        ELG   AS    
Sbjct: 6   LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLS 65

Query: 60  -----TIGGRY-IHCDVTKEEDVESAVRLAVSWKGQLDIMFNN--AGISGSGGSITSL-- 109
                T    Y +       EDV   +R    +K       +     +    G I  L  
Sbjct: 66  NGSLLTFAKIYPMDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVH 125

Query: 110 ---NMEDV-KFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSSSAAIMGGLASH--- 161
              N  ++ K LL  +  G L  +  ++ + +      G I+    S   +  LAS    
Sbjct: 126 SLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV 185

Query: 162 -----AYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK 215
                  S +K A+    +  A E G + GIRVN IS                 GKA   
Sbjct: 186 PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS---------AGPLASRAGKAIGF 236

Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
            E +    +D   L     A  E V  AA FL S  A  IT   L +D G   
Sbjct: 237 IERMVDYYQDWAPLPEPMEA--EQVGAAAAFLVSPLASAITGETLYVDHGANV 287

Length = 299

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 48/207 (23%), Positives = 78/207 (37%), Gaps = 12/207 (5%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
           A+I G   GIG A A+  A  G   ++    D    ALA                  E  
Sbjct: 1   ALILGATGGIGRALARALAGRG-WRLLLSGRD--AGALAGLAAEVGALARPADVAA-ELE 56

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           V       G LD++   AG +  G  +        + +L  NL G    +KHA   +  G
Sbjct: 57  VWALAQELGPLDLLVYAAG-AILGKPLARTKPAAWRRILDANLTGAALVLKHALALLAAG 115

Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
            R    +       ++ GL+  AY+ +K A+         E+   G+R+  + P  V + 
Sbjct: 116 AR-LVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLVRPPAVDTG 170

Query: 200 MLVNAYRKYLGKADMKPEEVCKMVRDS 226
           +     R  L K  + PE+V   + ++
Sbjct: 171 LWAPPGR--LPKGALSPEDVAAAILEA 195

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 25/193 (12%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVI--------ADILDELGAALASTIGGRYIHCDVTKE 73
           ITG + G+G A A+     G  +V+        AD       A    IG      D++  
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG------DLSSL 65

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG--ILHGIKH 131
            +        V+  G+ D + +NAGI  SG +  + +   +  +++VN+    +L  +  
Sbjct: 66  AETRKLAD-QVNAIGRFDAVIHNAGI-LSGPNRKTPD-TGIPAMVAVNVLAPYVLTALIR 122

Query: 132 AAKAMI----EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             K +I       R G+           G   S AYS SK  ++ LA + A       + 
Sbjct: 123 RPKRLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVARRWKD--VS 180

Query: 188 VNCISPHGVPSEM 200
            N + P  VP++M
Sbjct: 181 SNAVHPGWVPTKM 193

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 18 KVAVITGGARGIGAATAKLFAENGAHIV-IADILDELGAALASTIGGRYIH--CDVTKEE 74
          +  +ITG ++G+G A A    E G H++ I+   ++    LA            D+    
Sbjct: 2  RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 75 DVESAVRLAVSWKGQLD-----IMFNNAGI 99
          ++E+     +    Q D      + NNAG+
Sbjct: 62 ELETNFN-EILSSIQEDNVSSIHLINNAGM 90

Length = 251

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 40/217 (18%), Positives = 70/217 (32%), Gaps = 52/217 (23%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA--ALASTIGGR------YIHCD 69
              +ITGGA  IG+  A+ F + G  ++  D L   G+   LA     R      ++H D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +    D+E            +D++ + A       S         +     N  G L+  
Sbjct: 61  IRNRNDLEDLFE-------DIDLIIHTAAQPSVTTSA-----SSPRLDFETNALGTLN-- 106

Query: 130 KHAAKAMIEGQRK---GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL----- 181
                 ++E  R+    +    +S+        +  Y      +      T  EL     
Sbjct: 107 ------VLEAARQHAPNAPFIFTST--------NKVYGDLPNYLPLEELETRYELAPEGW 152

Query: 182 GKHGIRVN-----CISPHG---VPSEMLVNAYRKYLG 210
              GI  +       S +G     ++  V  Y +  G
Sbjct: 153 SPAGISESFPLDFSHSLYGASKGAADQYVQEYGRIFG 189

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR 224
           L+K ++    R  A  LG  GIR N IS    P + L  +  K  GK       +   V 
Sbjct: 161 LAKASLEASVRYLAVSLGPKGIRANGISAG--PIKTLAASGIKDFGK-------ILDFVE 211

Query: 225 DSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMS 274
            +  L   R+ +IE+V   A FL S+ A  +T     +D G+      M+
Sbjct: 212 SNAPL--RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAVVGGMA 259

Length = 260

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 70/270 (25%), Positives = 109/270 (40%), Gaps = 45/270 (16%)

Query: 17  GKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELG---AALASTIGGRYI-HCDV 70
           GK  +I G A    I    AK  A  GA +      + LG     LA ++G  ++  CDV
Sbjct: 7   GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDV 66

Query: 71  TKEEDVESAVR-LAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGIL 126
                V++    L   W G+LD + +  G S      G       E+    + ++     
Sbjct: 67  EDIASVDAVFEALEKKW-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFT 125

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLARSTA 178
              K AAK M +G   GS++  +   +        +MG        ++K A+    R  A
Sbjct: 126 EIAKRAAKLMPDG---GSMLTLTYGGSTRVMPNYNVMG--------VAKAALEASVRYLA 174

Query: 179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV--RDSGSLLRGRSAS 236
            + G  GIRVN IS    P   L  A     G  D +      +   +   S LR R+ +
Sbjct: 175 ADYGPQGIRVNAISAG--PVRTLAGA-----GIGDAR-----AIFSYQQRNSPLR-RTVT 221

Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           I++V  +AL+L S+ +  +T     +D GY
Sbjct: 222 IDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251

Length = 271

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           K  +I G +RGIG    + +  +G   VIA   D    A    +G   +  DV     V 
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADG-WRVIATARDAAALAALQALGAEALALDVADPASVA 60

Query: 78  SAVRLAVSWK---GQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
                 ++WK     LD     AG+ G     +  +  ED   ++  N+ G +  +    
Sbjct: 61  -----GLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILL 115

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHA---YSLSKEAI 170
             ++E    G +   SS    +G         Y  SK A+
Sbjct: 116 -PLVEAAG-GVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 49/220 (22%), Positives = 74/220 (33%), Gaps = 66/220 (30%)

Query: 18  KVAVITGGARG-IGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV 76
           K+ VI  GA G IG A     +    H VI           A    G     D+T    +
Sbjct: 2   KILVI--GASGTIGRAVVAELS--KRHEVIT----------AGRSSGDV-QVDITDPASI 46

Query: 77  ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS------VNLNGILHGIK 130
            +         G++D + + AG       +  +  ED    L       VNL  +L G  
Sbjct: 47  RALFEKV----GKVDAVVSAAG-KVHFAPLAEMTDEDFNVGLQSKLMGQVNL--VLIGQH 99

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASH------AYSLSKEAIIGLARSTACELGKH 184
           +           GS   TS      G L+        + +    A+ G  ++ A EL + 
Sbjct: 100 YLND-------GGSFTLTS------GILSDEPIPGGASAATVNGALEGFVKAAALELPR- 145

Query: 185 GIRVNCISP-----------------HGVPSEMLVNAYRK 207
           GIR+N +SP                   VP+  +  AY +
Sbjct: 146 GIRINVVSPTVLTESLEKYGPFFPGFEPVPAARVALAYVR 185

Length = 199

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)

Query: 10  LSSKRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVI---ADILDELGAALASTIGGR 64
           +++  L GK  +ITG A    I  A A+L  ++GA +     +++L++    LA  IG  
Sbjct: 1   MTTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCN 60

Query: 65  YI-HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSV 120
           ++   DVT  + + +         G  D + +    +      G     ++E+    L +
Sbjct: 61  FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHI 120

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           +   +L   + A   M +G   GSI+  +   A       +   ++K A+    +  A +
Sbjct: 121 SCYSLLELSRSAEALMHDG---GSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLAND 177

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI--- 237
           +G++ IRVN IS    P + L ++                  + D  ++L+  +A+    
Sbjct: 178 MGENNIRVNAISAG--PIKTLASS-----------------AIGDFSTMLKSHAATAPLK 218

Query: 238 -----EDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSS 272
                EDV  AA++L SE +  +T     +D GY    S+
Sbjct: 219 RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGSN 258

Length = 260

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 66/276 (23%), Positives = 109/276 (39%), Gaps = 57/276 (20%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDV 70
           L+GK  V+ G A  R I    A+   + GA ++     D +  +L   +      + CDV
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDV 64

Query: 71  TKEEDVESAVRLAVSWKGQLD-----IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
             +E +E A        G++D     I +        GG++T  + +   + L+ +++  
Sbjct: 65  ASDESIERAFATIKERVGKIDGIVHAIAYAKK--EELGGNVTDTSRDG--YALAQDISAY 120

Query: 126 -LHGIKHAAKAMIEGQRKGSIICTS---SSAAI----MGGLASHAYSLSKEAIIGLARST 177
            L  +   A+ ++      SI+  +   S  AI    + G+A       K A+    R  
Sbjct: 121 SLIAVAKYARPLL--NPGASIVTLTYFGSERAIPNYNVMGIA-------KAALESSVRYL 171

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR------ 231
           A +LGK GIRVN IS   V          K L    +K             LL+      
Sbjct: 172 ARDLGKKGIRVNAISAGAV----------KTLAVTGIK---------GHKDLLKESDSRT 212

Query: 232 --GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             G   +IE+V   A FL S+ +  +T   + +D G
Sbjct: 213 VDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	278
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK08177	225	short chain dehydrogenase; Provisional	99.98
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02653	340	GDP-mannose 4,6-dehydratase	99.88
PLN02572	442	UDP-sulfoquinovose synthase	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.85
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.83
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.82
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02240	352	UDP-glucose 4-epimerase	99.81
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.8
PLN02686	367	cinnamoyl-CoA reductase	99.8
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.78
PLN02427	386	UDP-apiose/xylose synthase	99.78
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.78
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.77
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.76
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.75
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
PLN02260	668	probable rhamnose biosynthetic enzyme	99.7
PLN02206	442	UDP-glucuronate decarboxylase	99.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.69
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.69
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.69
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.69
CHL00194	317	ycf39 Ycf39; Provisional	99.67
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.67
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.64
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.57
PRK05865	854	hypothetical protein; Provisional	99.57
PRK07201	657	short chain dehydrogenase; Provisional	99.55
PLN02996	491	fatty acyl-CoA reductase	99.55
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.55
PLN02778	298	3,5-epimerase/4-reductase	99.52
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.45
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.45
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.42
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.39
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.34
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.34
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.34
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.33
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.33
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.32
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.32
PLN00016	378	RNA-binding protein; Provisional	99.3
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.27
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.25
PLN02503	605	fatty acyl-CoA reductase 2	99.25
PRK08309	177	short chain dehydrogenase; Provisional	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.22
PRK12320	699	hypothetical protein; Provisional	99.22
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.16
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.09
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.03
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.89
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.76
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.74
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.68
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.67
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.64
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.63
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.6
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.59
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.59
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.5
COG2910	211	Putative NADH-flavin reductase [General function p	98.39
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.32
PRK09620	229	hypothetical protein; Provisional	98.29
PLN00106	323	malate dehydrogenase	98.23
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.23
KOG2774	366	consensus NAD dependent epimerase [General functio	98.22
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.17
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.15
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.06
PRK14982	340	acyl-ACP reductase; Provisional	98.06
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.02
PTZ00325	321	malate dehydrogenase; Provisional	97.93
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.81
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.79
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.78
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.77
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.75
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.65
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.59
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.58
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.57
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.55
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.51
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.48
COG3268	382	Uncharacterized conserved protein [Function unknow	97.48
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.45
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.44
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.41
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.38
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.34
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.33
PRK06849	389	hypothetical protein; Provisional	97.32
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.31
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.28
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.26
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.26
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.22
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.21
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.2
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.19
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.19
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.18
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.15
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.1
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.08
PRK09496	453	trkA potassium transporter peripheral membrane com	97.07
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.04
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.02
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.99
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.97
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.95
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.95
PRK05086	312	malate dehydrogenase; Provisional	96.93
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.91
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.9
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.88
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.88
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.87
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.85
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.83
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.83
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.83
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.82
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.79
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.77
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.76
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.76
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.75
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.73
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.71
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.7
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.69
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.62
PLN00203	519	glutamyl-tRNA reductase	96.57
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.51
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.5
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.49
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.49
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.48
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.47
PRK04148	134	hypothetical protein; Provisional	96.46
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.46
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.45
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.44
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.42
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.41
PRK09496	453	trkA potassium transporter peripheral membrane com	96.39
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.39
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.32
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.31
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.28
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.27
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.27
PRK08655	437	prephenate dehydrogenase; Provisional	96.25
PLN02740	381	Alcohol dehydrogenase-like	96.22
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.2
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.19
PTZ00117	319	malate dehydrogenase; Provisional	96.15
PTZ00354	334	alcohol dehydrogenase; Provisional	96.14
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.13
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.13
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.12
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.11
PRK14968	188	putative methyltransferase; Provisional	96.11
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.09
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.08
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.06
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.03
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.03
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.02
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.02
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.96
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.96
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.95
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.93
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.92
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.92
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.91
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.9
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.9
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.89
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.88
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.84
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.83
PLN02827	378	Alcohol dehydrogenase-like	95.82
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.81
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.81
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.8
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.79
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.79
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.76
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.75
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.74
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.7
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.65
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.6
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.57
PRK10669	558	putative cation:proton antiport protein; Provision	95.56
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.55
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.54
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.52
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.51
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.49
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.48
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.48
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.47
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.45
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.42
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.38
PRK05442	326	malate dehydrogenase; Provisional	95.38
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.35
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.34
PRK12480	330	D-lactate dehydrogenase; Provisional	95.34
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.34
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.32
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.32
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.27
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.27
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.23
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	95.2
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.18
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.16
PLN02494	477	adenosylhomocysteinase	95.15
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.13
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	95.08
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.05
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.05
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.04
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.02
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.99
PLN02928	347	oxidoreductase family protein	94.97
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.94
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	94.92
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.92
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.9
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	94.9
PRK13243	333	glyoxylate reductase; Reviewed	94.88
PLN02602	350	lactate dehydrogenase	94.88
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	94.86
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.85
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	94.8
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	94.79
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	94.77
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.76
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.76
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.74
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.74
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.72
cd08252	336	AL_MDR Arginate lyase and other MDR family members	94.69
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	94.68

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.3e-49  Score=307.23  Aligned_cols=242  Identities=33%  Similarity=0.516  Sum_probs=215.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ..++.|+++||||++|||++++..|++.|++|++++++.+..++....++    -..+.||+++..+++.++++..+.+|
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999998877776666554    34689999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-cCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ++++||||||+. ....+-.+..++|+..+.+|+.|.|+++|++.+.|.. +.+..+||+|||+.+..+.-+...|+++|
T Consensus        90 ~psvlVncAGIt-rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen   90 TPSVLVNCAGIT-RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK  168 (256)
T ss_pred             CCcEEEEcCccc-cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence            999999999997 4456778899999999999999999999999999544 33356999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++.+|+|+.++|++++|||||+|+||++.|||.+..          +|.-.+....   .+|++|++.+||+|+.++||
T Consensus       169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m----------p~~v~~ki~~---~iPmgr~G~~EevA~~V~fL  235 (256)
T KOG1200|consen  169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM----------PPKVLDKILG---MIPMGRLGEAEEVANLVLFL  235 (256)
T ss_pred             CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc----------CHHHHHHHHc---cCCccccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999998753          4444444433   35889999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+..+|+||+++.++||..+
T Consensus       236 AS~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             hccccccccceeEEEeccccC
Confidence            999999999999999999753

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-48  Score=329.50  Aligned_cols=256  Identities=26%  Similarity=0.316  Sum_probs=217.5

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |.+.+|++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++      ++.++.+|++|+++++++++++
T Consensus         1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          1 MLKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             CCccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999999887766655433      3568899999999999999998


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      . .+|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|
T Consensus        81 ~-~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y  157 (263)
T PRK08339         81 K-NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALS  157 (263)
T ss_pred             H-hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhh
Confidence            6 5899999999999753 45788999999999999999999999999999998755 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +++|+|+++|+++++.|++++|||||+|+||+++|++..............++++..+..  ....|++|+.+|+|+|++
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~r~~~p~dva~~  235 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY--AKPIPLGRLGEPEEIGYL  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH--hccCCcccCcCHHHHHHH
Confidence            999999999999999999999999999999999999876543221111122223322222  223478999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      ++||+++.+.++||+++.+|||+...+
T Consensus       236 v~fL~s~~~~~itG~~~~vdgG~~~~~  262 (263)
T PRK08339        236 VAFLASDLGSYINGAMIPVDGGRLNSV  262 (263)
T ss_pred             HHHHhcchhcCccCceEEECCCccccC
Confidence            999999999999999999999988653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-47  Score=321.20  Aligned_cols=242  Identities=23%  Similarity=0.292  Sum_probs=205.3

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALAST--IGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ..|++|+++||||+  +|||+++|++|+++|++|++++|+++..+.+.+.  ..+.++++|++|.++++++++++.+++|
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999  8999999999999999999999874322222221  1356889999999999999999999999


Q ss_pred             CccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           89 QLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        89 ~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      ++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.+++..|++
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y~a  159 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAIPNYNVMGI  159 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccCCcchhhHH
Confidence            99999999997643   257788999999999999999999999999999964   479999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+++|+++++.|++++||+||+|+||.++|++.....         .+++..+....  ..|.+|+.+|||+|+++.
T Consensus       160 sKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~r~~~pedva~~~~  228 (252)
T PRK06079        160 AKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK---------GHKDLLKESDS--RTVDGVGVTIEEVGNTAA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC---------ChHHHHHHHHh--cCcccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999753211         11222221211  236789999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++++.++||+++.+|||+++
T Consensus       229 ~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        229 FLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             HHhCcccccccccEEEeCCceec
Confidence            99999999999999999999764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-46  Score=320.73  Aligned_cols=243  Identities=24%  Similarity=0.298  Sum_probs=204.3

Q ss_pred             CCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHH---HHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELG---AALASTIG-GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~---~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .|++|++|||||++  |||+++|++|+++|++|++++|+++..   +++.+..+ ..++++|++|.++++++++++.+.+
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            47899999999996  999999999999999999998875332   23322222 3468899999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           88 GQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+..+.+++..|+
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccCCccchhh
Confidence            999999999997532   146778999999999999999999999999999963   48999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+|+.+|+++++.|++++|||||+|+||+++|++.....         +.........  ...|++|+.+|||+|+++
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~---------~~~~~~~~~~--~~~p~~r~~~peeva~~~  229 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG---------DARAIFSYQQ--RNSPLRRTVTIDEVGGSA  229 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc---------chHHHHHHHh--hcCCccccCCHHHHHHHH
Confidence            99999999999999999999999999999999998743210         1111111111  123678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      +||+++...++||+++.+|||+.+..
T Consensus       230 ~fL~s~~~~~itG~~i~vdgG~~~~~  255 (271)
T PRK06505        230 LYLLSDLSSGVTGEIHFVDSGYNIVS  255 (271)
T ss_pred             HHHhCccccccCceEEeecCCcccCC
Confidence            99999999999999999999987543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-46  Score=316.75  Aligned_cols=246  Identities=23%  Similarity=0.229  Sum_probs=205.7

Q ss_pred             cCCCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDE---LGAALASTIG-GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      -..+++|++|||||++  |||+++|++|+++|++|++++|++.   ..+++.+..+ ..++++|++|+++++++++++.+
T Consensus         3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHH
Confidence            3467899999999997  9999999999999999999988742   2333333323 23568999999999999999999


Q ss_pred             hcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           86 WKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        86 ~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      ++|++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.+++..
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~  159 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVIPNYNV  159 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCCCcccc
Confidence            99999999999997532   246778999999999999999999999999999954   589999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+|+++|+++++.|++++||+||+|+||.++|++....     .   ..++......   ...|.+|+++|+|+|+
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-----~---~~~~~~~~~~---~~~p~~r~~~pedva~  228 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-----G---DFSTMLKSHA---ATAPLKRNTTQEDVGG  228 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-----C---CcHHHHHHHH---hcCCcCCCCCHHHHHH
Confidence            999999999999999999999999999999999999974321     0   0111111111   1236789999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +++||+++++.++||+++.+|||+.+...
T Consensus       229 ~~~~L~s~~~~~itG~~i~vdgG~~~~~~  257 (260)
T PRK06603        229 AAVYLFSELSKGVTGEIHYVDCGYNIMGS  257 (260)
T ss_pred             HHHHHhCcccccCcceEEEeCCcccccCc
Confidence            99999999999999999999999886543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-46  Score=315.09  Aligned_cols=243  Identities=28%  Similarity=0.437  Sum_probs=207.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|... ...+..+..  ++.++.+|++++++++++++++.+.+|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999988642 222222222  3567899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..|+||++||..+..+.++...|++||++
T Consensus        84 iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a  162 (251)
T PRK12481         84 IDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSA  162 (251)
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHH
Confidence            99999999986 34577889999999999999999999999999999875545899999999999998888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +++|+++++.|++++||+||.|+||+++|++......        .+........   ..|.+|+.+|||+|++++||++
T Consensus       163 ~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~--------~~~~~~~~~~---~~p~~~~~~peeva~~~~~L~s  231 (251)
T PRK12481        163 VMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA--------DTARNEAILE---RIPASRWGTPDDLAGPAIFLSS  231 (251)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc--------ChHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999998653210        1111112222   2467899999999999999999


Q ss_pred             CCCCCceeeEEeecCCcc
Q 023708          250 EEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~  267 (278)
                      +...++||+++.+|||+.
T Consensus       232 ~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        232 SASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             ccccCcCCceEEECCCEe
Confidence            999999999999999975

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-46  Score=319.91  Aligned_cols=241  Identities=21%  Similarity=0.258  Sum_probs=203.9

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILD---ELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .|++|++|||||+  +|||+++|++|+++|++|++++|++   +..+++.++.+ ..++++|++|.++++++++++.+.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999997  8999999999999999999999875   23344433332 2578899999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           88 GQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.+++..|+
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~~~~~~Y~  158 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYVPHYNVMG  158 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCCCcchhhh
Confidence            999999999997532   356788999999999999999999999999999965   47999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++.....         ..........  ...|++|..+|||+|+++
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~---------~~~~~~~~~~--~~~pl~r~~~pedva~~v  227 (274)
T PRK08415        159 VAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG---------DFRMILKWNE--INAPLKKNVSIEEVGNSG  227 (274)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc---------hhhHHhhhhh--hhCchhccCCHHHHHHHH
Confidence            99999999999999999999999999999999998643210         0111111111  123678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++.+.++||+++.+|||+.+
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCcccc
Confidence            999999999999999999999874

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-45  Score=314.21  Aligned_cols=250  Identities=33%  Similarity=0.444  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++       ++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999887776665443       256789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .++++|+||||||... ..+..+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++..+|++
T Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  160 (260)
T PRK07063         83 AFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPV  160 (260)
T ss_pred             HhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHHHH
Confidence            9999999999999753 34567888999999999999999999999999998754 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++....+...     ..++.......  ...|.+|+.+|+|+|++++
T Consensus       161 sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~r~~~~~~va~~~~  233 (260)
T PRK07063        161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-----PDPAAARAETL--ALQPMKRIGRPEEVAMTAV  233 (260)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-----CChHHHHHHHH--hcCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999876543110     11221211111  2236799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccCcC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      ||+++...++||+++.+|||+++...
T Consensus       234 fl~s~~~~~itG~~i~vdgg~~~~~~  259 (260)
T PRK07063        234 FLASDEAPFINATCITIDGGRSVLYH  259 (260)
T ss_pred             HHcCccccccCCcEEEECCCeeeecc
Confidence            99999999999999999999986543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=8.1e-46  Score=314.86  Aligned_cols=254  Identities=41%  Similarity=0.559  Sum_probs=210.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--------CeEEEecCCCHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--------GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      ...+.+|++||||+++|||+++|++|++.|++|++++|+++..++......        +..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999888776654422        567889999999999999999


Q ss_pred             Hhh-cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHH-HHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC-
Q 023708           84 VSW-KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG-ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS-  160 (278)
Q Consensus        84 ~~~-~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-  160 (278)
                      .++ +|++|+||||||......++.+.+.++|++.+++|+.| .+.+.+.+.+++.+ .+.+.|+++||..+..+.+.. 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~-~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKK-SKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHh-cCCceEEEEeccccccCCCCCc
Confidence            988 79999999999988666689999999999999999996 55555555555554 448999999999998876665 


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|+++|+|+++|+|+++.||+++|||||+|.||.+.|++....+      .....++..+........|.+|++.|+|+
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~------~~~~~~~~~~~~~~~~~~p~gr~g~~~ev  235 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGL------DDGEMEEFKEATDSKGAVPLGRVGTPEEV  235 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccccc------ccchhhHHhhhhccccccccCCccCHHHH
Confidence            799999999999999999999999999999999999999811100      00001122222112334578999999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccCcCc
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      +..+.||+++++.|+||+++.+|||+++..+.
T Consensus       236 a~~~~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  236 AEAAAFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             HHhHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence            99999999999889999999999999986554

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-45  Score=312.99  Aligned_cols=256  Identities=25%  Similarity=0.334  Sum_probs=216.8

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      |+..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++       ++.++.+|++|.+++.+++++
T Consensus         1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999877666544332       345788999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...
T Consensus        81 ~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  158 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQG-RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVA  158 (265)
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchH
Confidence            999999999999999986 445788899999999999999999999999999998754 689999999999999899999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+++|+++.+|+++++.|++++||+|++|+||+++|+++.+.+.... .....+.+...........|.+|+.+|+|+|+
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~  237 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARA-DPGQSWEAWTAALARKKGIPLGRLGRPDEAAR  237 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhh-ccCCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence            99999999999999999999999999999999999998765442111 11112222222222223457799999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++||+++...++||+++.+|||++.
T Consensus       238 ~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        238 ALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHHhCchhcccccceEEEcCceEe
Confidence            99999999899999999999999764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-45  Score=312.07  Aligned_cols=243  Identities=24%  Similarity=0.297  Sum_probs=205.6

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHH---HHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDEL---GAALASTIG-GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~---~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+++.   .+++.++.+ ..+++||++|.++++++++++.+.
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            45789999999998  599999999999999999999987543   333433332 457899999999999999999999


Q ss_pred             cCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           87 KGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.+++..|
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~~~~~~Y  162 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVVENYNLM  162 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCCccchhh
Confidence            9999999999997532   246778999999999999999999999999999953   5799999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+.+|+++++.|++++||+||+|+||.++|++.....         ..++..+...  ...|.+|+.+|+|+|++
T Consensus       163 ~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~--~~~p~~r~~~p~dva~~  231 (258)
T PRK07533        163 GPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID---------DFDALLEDAA--ERAPLRRLVDIDDVGAV  231 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC---------CcHHHHHHHH--hcCCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999864311         1111111111  12367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++...++||+++.+|||++.+
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHhChhhccccCcEEeeCCccccc
Confidence            99999998999999999999998754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-45  Score=310.15  Aligned_cols=252  Identities=19%  Similarity=0.204  Sum_probs=213.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++|||||++|||++++++|+++|++|++++|+++..++..+++    ++.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6999999999999999999999999999999987766554433    367889999999999999999999999999999


Q ss_pred             ECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           95 NNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        95 ~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      ||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.++...|+||++||..+..+.++...|+++|+++++|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            99997532 34577888999999999999999999999999987544478999999999998889999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++++.+++++||+||+|+||+++|++...............+++ ......  ...|++|+++|+|+|++++||+++.+
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVL--ERTPLKRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHh--ccCCccCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999998765433222222222222 111111  23477999999999999999999999


Q ss_pred             CCceeeEEeecCCcccCcCc
Q 023708          253 GFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~~~~~  272 (278)
                      +++||+++.+|||++++.+.
T Consensus       240 ~~itG~~i~vdgg~~~~~~~  259 (259)
T PRK08340        240 EYMLGSTIVFDGAMTRGVNL  259 (259)
T ss_pred             ccccCceEeecCCcCCCCCC
Confidence            99999999999999988763

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-45  Score=310.82  Aligned_cols=240  Identities=33%  Similarity=0.442  Sum_probs=207.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++++++++++++++.+.+|
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999887776665543     256788999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-C-CCchhhhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-L-ASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~-~~~~Y~~s  166 (278)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+. + ....|++|
T Consensus        86 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as  164 (253)
T PRK05867         86 GIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCAS  164 (253)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence            9999999999863 4577889999999999999999999999999999875545799999999886543 3 45789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|++++++|++++||+||+|+||+++|++....           ++.......   ..|.+|+.+|+|+|++++|
T Consensus       165 Kaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~-----------~~~~~~~~~---~~~~~r~~~p~~va~~~~~  230 (253)
T PRK05867        165 KAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY-----------TEYQPLWEP---KIPLGRLGRPEELAGLYLY  230 (253)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-----------hHHHHHHHh---cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999986431           111111111   2367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...++||+++.+|||+++
T Consensus       231 L~s~~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             HcCcccCCcCCCeEEECCCccC
Confidence            9999999999999999999864

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.6e-45  Score=313.60  Aligned_cols=242  Identities=24%  Similarity=0.295  Sum_probs=204.1

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecc------hHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADIL------DELGAALASTI-GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~------~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++++|+++||||+  +|||+++|++|+++|++|+++.|.      ++..+++.+.. .+.++++|++|+++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4789999999986  899999999999999999987543      33344443332 25678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           85 SWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      +++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.+++.
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCCcccc
Confidence            999999999999997532   356788999999999999999999999999999965   47999999999998999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      .|++||+|+.+|+++++.|++++||+||.|+||+++|++.....       . .++.......   ..|.+|+++|+|++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~-------~-~~~~~~~~~~---~~p~~r~~~~~dva  228 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVG-------G-ILDMIHHVEE---KAPLRRTVTQTEVG  228 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccc-------c-chhhhhhhhh---cCCcCcCCCHHHHH
Confidence            99999999999999999999999999999999999999753210       0 1111111111   23678999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++++||+++...++||+++.+|||++++
T Consensus       229 ~~~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        229 NTAAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             HHHHHHhChhhccccCcEEEECCccccc
Confidence            9999999999999999999999998764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.5e-45  Score=312.04  Aligned_cols=244  Identities=24%  Similarity=0.273  Sum_probs=203.4

Q ss_pred             CCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILD---ELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||  ++|||+++|++|+++|++|++++|.+   +..+++.++.+ ...++||++|.++++++++++.+++|
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            68899999997  67999999999999999999987653   23333333222 45789999999999999999999999


Q ss_pred             CccEEEECCccCCCC---C-CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           89 QLDIMFNNAGISGSG---G-SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        89 ~id~li~nag~~~~~---~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++|+||||||+....   . .+++.+.++|+..+++|+.++++++++++|.|.++  .|+||++||..+..+.+++..|+
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~~~~~~Y~  161 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAIPNYNVMG  161 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCCCCcccch
Confidence            999999999986331   1 24567889999999999999999999999998643  48999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+|+.+|++.++.|++++||+||.|+||+++|++.....         .+.+.......  ..|++|+.+|||+|+++
T Consensus       162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~r~~~peevA~~v  230 (261)
T PRK08690        162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA---------DFGKLLGHVAA--HNPLRRNVTIEEVGNTA  230 (261)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC---------chHHHHHHHhh--cCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999754210         11222222211  23679999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCcC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +||+++...++||++|.+|||+.+...
T Consensus       231 ~~l~s~~~~~~tG~~i~vdgG~~~~~~  257 (261)
T PRK08690        231 AFLLSDLSSGITGEITYVDGGYSINAL  257 (261)
T ss_pred             HHHhCcccCCcceeEEEEcCCcccccc
Confidence            999999999999999999999887543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.9e-45  Score=297.12  Aligned_cols=225  Identities=33%  Similarity=0.448  Sum_probs=198.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC---CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG---GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+++|+++|||||+|||.++|++|++.|++|++++|+.++++++..+++   +.++..|++|.++++++++.+.+.|+++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3567999999999999999999999999999999999999999998887   6888999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||.... .++++.+.++|++++++|+.|.++.+++++|.|.+++ .|+||++||+++..++|+...|+++|+++
T Consensus        83 DiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK~aV  160 (246)
T COG4221          83 DILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAV  160 (246)
T ss_pred             cEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhHHHH
Confidence            999999998744 8999999999999999999999999999999999976 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      .+|++.|+.|+..++|||..|.||.+.|+.+..+..+      .+.+..+.....      ....+|+|||+.++|.++.
T Consensus       161 ~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~------g~~~~~~~~y~~------~~~l~p~dIA~~V~~~~~~  228 (246)
T COG4221         161 RAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE------GDDERADKVYKG------GTALTPEDIAEAVLFAATQ  228 (246)
T ss_pred             HHHHHHHHHHhcCCCeeEEEecCceecceecccccCC------chhhhHHHHhcc------CCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999977755433200      011222222222      3477999999999999986


Q ss_pred             CC
Q 023708          251 EA  252 (278)
Q Consensus       251 ~~  252 (278)
                      +.
T Consensus       229 P~  230 (246)
T COG4221         229 PQ  230 (246)
T ss_pred             CC
Confidence            63

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-45  Score=311.49  Aligned_cols=246  Identities=22%  Similarity=0.258  Sum_probs=204.7

Q ss_pred             CCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecc---hHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADIL---DELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~---~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .|++|++|||||  ++|||+++|++|+++|++|++++|.   ++..+++.++.+ ..++++|++|+++++++++++.+++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            367899999996  6799999999999999999998643   444444444333 3468899999999999999999999


Q ss_pred             CCccEEEECCccCCCC---C-CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           88 GQLDIMFNNAGISGSG---G-SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        88 g~id~li~nag~~~~~---~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      |++|+||||||+....   . .+.+.+.++|++.+++|+.++++++++++|+|.+   .|+||++||..+..+.+++..|
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~~~~~~~~Y  159 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERVVPNYNTM  159 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCCcchH
Confidence            9999999999975331   1 2456888999999999999999999999999943   5799999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.....         +.++.......  ..|++|..+|||++++
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~r~~~pedva~~  228 (260)
T PRK06997        160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIK---------DFGKILDFVES--NAPLRRNVTIEEVGNV  228 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcccc---------chhhHHHHHHh--cCcccccCCHHHHHHH
Confidence            999999999999999999999999999999999998643210         11111111111  2367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCcCcc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGTSSM  273 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~  273 (278)
                      ++||+++++.++||++|.+|||++..+..|
T Consensus       229 ~~~l~s~~~~~itG~~i~vdgg~~~~~~~~  258 (260)
T PRK06997        229 AAFLLSDLASGVTGEITHVDSGFNAVVGGM  258 (260)
T ss_pred             HHHHhCccccCcceeEEEEcCChhhccccc
Confidence            999999999999999999999999877665

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.3e-45  Score=312.18  Aligned_cols=242  Identities=24%  Similarity=0.289  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILD---ELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..|++|++|||||+  +|||+++|++|+++|++|++++|++   +..+++.++++ ..++++|++|+++++++++++.++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            35678999999997  8999999999999999999988863   33444444433 456899999999999999999999


Q ss_pred             cCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           87 KGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.+++..|
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCcchhh
Confidence            9999999999997642   256788999999999999999999999999999854   4899999999988888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++....     .    ..........  ...|++|+.+|||+|++
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-----~----~~~~~~~~~~--~~~p~~r~~~peevA~~  231 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-----G----DFRYILKWNE--YNAPLRRTVTIEEVGDS  231 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-----C----cchHHHHHHH--hCCcccccCCHHHHHHH
Confidence            99999999999999999999999999999999999864311     0    1111111111  12367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++...++||++|.+|||+++
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        232 ALYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             HHHHhCccccCccceEEEECCCcee
Confidence            9999999999999999999999874

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3.9e-45  Score=308.24  Aligned_cols=230  Identities=38%  Similarity=0.496  Sum_probs=204.2

Q ss_pred             CCC--ChhHHHHHHHHHHcCCeEEEEecchHH----HHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-CCccEEEEC
Q 023708           24 GGA--RGIGAATAKLFAENGAHIVIADILDEL----GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-GQLDIMFNN   96 (278)
Q Consensus        24 Gas--~giG~~ia~~L~~~g~~Vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id~li~n   96 (278)
                      |++  +|||+++|++|+++|++|++++|+.+.    .+++.++.+..++.+|++++++++++++++.+.+ |++|+||||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  999999999999999999999999876    4555666677789999999999999999999999 999999999


Q ss_pred             CccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           97 AGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        97 ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      +|....   ..++.+.+.++|++.+++|+.+++.+++++.|.|.+   .|+||++||..+..+.++...|+++|+|+++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            998654   468889999999999999999999999999998877   47999999999999999999999999999999


Q ss_pred             HHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +|+++.||++ +|||||+|.||++.|++.....         ..++..+....  ..|++|+.+|+|||++++||+|+.+
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~---------~~~~~~~~~~~--~~pl~r~~~~~evA~~v~fL~s~~a  226 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIP---------GNEEFLEELKK--RIPLGRLGTPEEVANAVLFLASDAA  226 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHH---------THHHHHHHHHH--HSTTSSHBEHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhccc---------cccchhhhhhh--hhccCCCcCHHHHHHHHHHHhCccc
Confidence            9999999999 9999999999999999866543         12223322222  2378999999999999999999999


Q ss_pred             CCceeeEEeecCCcc
Q 023708          253 GFITAHNLVIDGGYT  267 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~  267 (278)
                      .++||++|.+|||++
T Consensus       227 ~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  227 SYITGQVIPVDGGFS  241 (241)
T ss_dssp             TTGTSEEEEESTTGG
T ss_pred             cCccCCeEEECCCcC
Confidence            999999999999986

...

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-44  Score=307.74  Aligned_cols=242  Identities=22%  Similarity=0.255  Sum_probs=205.1

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecc---hHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADIL---DELGAALASTI---GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~---~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+   ++.++++.++.   ++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            35789999999997  899999999999999999998764   34455555443   35678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           85 SWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      +++|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++..
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~  159 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQNYN  159 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCCCCc
Confidence            999999999999997532   356778999999999999999999999999999954   48999999999999988889


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++..... .       .++..... .  ...|.+|..+|+|+|
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~-------~~~~~~~~-~--~~~p~~r~~~p~~va  228 (257)
T PRK08594        160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVG-G-------FNSILKEI-E--ERAPLRRTTTQEEVG  228 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhc-c-------ccHHHHHH-h--hcCCccccCCHHHHH
Confidence            99999999999999999999999999999999999999753210 0       01111111 1  123678999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++||+++.+.++||+++.+|||+..
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCchhc
Confidence            999999999999999999999999763

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=306.61  Aligned_cols=244  Identities=39%  Similarity=0.523  Sum_probs=211.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++     ++.++.+|+++.++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999999987777665543     356789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK  167 (278)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+. .+.+++..|++||
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHHHH
Confidence            9999999999865556788899999999999999999999999999998755 6899999999887 5778889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.++++++.|++++||+|++|+||+++|++.....        ..+ +........  .|.+++.+|+|+|+.++||
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~-~~~~~~~~~--~~~~~~~~~~~va~~~~~l  230 (254)
T PRK07478        162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG--------DTP-EALAFVAGL--HALKRMAQPEEIAQAALFL  230 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc--------CCH-HHHHHHHhc--CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999764321        011 122222221  2568899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++...+++|+++.+|||+++.
T Consensus       231 ~s~~~~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        231 ASDAASFVTGTALLVDGGVSIT  252 (254)
T ss_pred             cCchhcCCCCCeEEeCCchhcc
Confidence            9998899999999999998754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2e-44  Score=311.42  Aligned_cols=241  Identities=22%  Similarity=0.198  Sum_probs=198.6

Q ss_pred             CCCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------------C-----CeEEEecC--
Q 023708           13 KRLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------------G-----GRYIHCDV--   70 (278)
Q Consensus        13 ~~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------------~-----~~~~~~D~--   70 (278)
                      ++|+||++|||||  |+|||+++|+.|+++|++|++ +|..+.++.+....             +     ...+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999999 66544443332111             0     34678888  


Q ss_pred             CC------------------HHHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Q 023708           71 TK------------------EEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIKH  131 (278)
Q Consensus        71 ~~------------------~~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  131 (278)
                      ++                  +++++++++++.+.+|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  44899999999999999999999998643 236789999999999999999999999999


Q ss_pred             HHHHHHccCCCcEEEEecCchhhcCCCCC-chhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhhh
Q 023708          132 AAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKYL  209 (278)
Q Consensus       132 ~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~  209 (278)
                      ++|.|.+   .|+||++||..+..+.++. ..|++||+|+++|+++|+.|+++ +|||||+|+||+++|++... ..   
T Consensus       164 ~~p~m~~---~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~---  236 (303)
T PLN02730        164 FGPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IG---  236 (303)
T ss_pred             HHHHHhc---CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-cc---
Confidence            9999975   3899999999998888865 48999999999999999999986 79999999999999998653 10   


Q ss_pred             ccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                           ..++......  ...|++|+..|+|++++++||+++.+.++||+.+.+|||++.
T Consensus       237 -----~~~~~~~~~~--~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        237 -----FIDDMIEYSY--ANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             -----ccHHHHHHHH--hcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence                 0111111111  123668899999999999999999999999999999999764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-44  Score=305.75  Aligned_cols=245  Identities=29%  Similarity=0.352  Sum_probs=207.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..+|++|++|||||++|||++++++|+++|++|++++| +++..+.+.+.+      ++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999998865 444444433222      35788999999999999999999


Q ss_pred             hhcCCccEEEECCccCC-----CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           85 SWKGQLDIMFNNAGISG-----SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        85 ~~~g~id~li~nag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      +.++++|+||||||+..     ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.++
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCCC
Confidence            99999999999998642     234677888999999999999999999999999998754 689999999998888899


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      +..|++||++++.|+++++.|++++||+|++|+||+++|++.....         ..++..+....  ..|.+|+.+|+|
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~---------~~~~~~~~~~~--~~~~~r~~~p~~  230 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT---------NYEEVKAKTEE--LSPLNRMGQPED  230 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc---------CCHHHHHHHHh--cCCCCCCCCHHH
Confidence            9999999999999999999999999999999999999999864321         11222222211  236689999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|++++||+++...+++|+++.+|||+++
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence            99999999999899999999999999875

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=9.8e-44  Score=302.68  Aligned_cols=250  Identities=31%  Similarity=0.417  Sum_probs=212.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..      ..+.++.+|++|+++++++++++.++++++|+|
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999876432      146688999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+++..|+++|++++++
T Consensus        77 i~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~  154 (258)
T PRK06398         77 VNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAVLGL  154 (258)
T ss_pred             EECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhHHHHHHH
Confidence            9999985 446788999999999999999999999999999998754 68999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++++.|+++. |+||+|+||+++|++........   ....++...... ......|.+|+.+|+|+|++++||+++..
T Consensus       155 ~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~  230 (258)
T PRK06398        155 TRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELE---VGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA  230 (258)
T ss_pred             HHHHHHHhCCC-CEEEEEecCCccchHHhhhhhcc---ccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence            99999999875 99999999999999876532110   011222221111 11122367899999999999999999999


Q ss_pred             CCceeeEEeecCCcccCcCcccc
Q 023708          253 GFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      .+++|+++.+|||++...|.-++
T Consensus       231 ~~~~G~~i~~dgg~~~~~~~~~~  253 (258)
T PRK06398        231 SFITGECVTVDGGLRALIPLSTP  253 (258)
T ss_pred             CCCCCcEEEECCccccCCCCCCC
Confidence            99999999999999887766544

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-44  Score=304.30  Aligned_cols=240  Identities=19%  Similarity=0.244  Sum_probs=199.0

Q ss_pred             CCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILD---ELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||++  |||+++|++|+++|++|++++|+.   +..+++.... ...++.||++|+++++++++++.+.+|
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            6789999999986  999999999999999999998873   2233333322 245788999999999999999999999


Q ss_pred             CccEEEECCccCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           89 QLDIMFNNAGISGSG----GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        89 ~id~li~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++|+||||||+....    .++.+.+.++|++.+++|+.+++.+++++.|.+.+   .|+||++||..+..+.+++..|+
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCCCCCCcchhH
Confidence            999999999975321    12567889999999999999999999999986642   47999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....         ...+......  ...|.+|+..|+|+++++
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~---------~~~~~~~~~~--~~~p~~r~~~pedva~~~  229 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---------DFRKMLAHCE--AVTPIRRTVTIEDVGNSA  229 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCC---------chHHHHHHHH--HcCCCcCCCCHHHHHHHH
Confidence            99999999999999999999999999999999998643110         1111111111  123678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...++||+++.+|||+..
T Consensus       230 ~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        230 AFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HHHcCcccccccCcEEEECCCccc
Confidence            999999999999999999999764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.4e-43  Score=303.90  Aligned_cols=246  Identities=33%  Similarity=0.477  Sum_probs=209.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||+++++.|+++|++|++++|+ +...+..+++     ++.++.+|+++.++++++++++.+.+|
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998 5555444333     267889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++.+++.++|.|.++  .++||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999986544577888999999999999999999999999999864  389999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHh--hcCCCCCCCCCCHHHHHHHHHH
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR--DSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~edva~~~~~  246 (278)
                      ++++|+++++.|++++||+||+|+||.++|++.......       .++.......  .....|.+|+.+|+|+|++++|
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  232 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGT-------SEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF  232 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhccc-------chhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999987543210       1111111111  1112367889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...+++|+++.+|||....
T Consensus       233 l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        233 LASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             HcCchhcCcCCCEEEECCCcccC
Confidence            99998999999999999998643

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=300.79  Aligned_cols=244  Identities=34%  Similarity=0.426  Sum_probs=208.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++.+  +.++++|++++++++++++++.+.++++|
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4688999999999999999999999999999999999877766665543  67889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||..... . .+.+.++|++.+++|+.+++.++++++|.|. ++ .++||++||..+..+.+++..|+++|++++
T Consensus        83 ~lv~~ag~~~~~-~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~~~~~~~Y~asKaa~~  158 (261)
T PRK08265         83 ILVNLACTYLDD-G-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFAQTGRWLYPASKAAIR  158 (261)
T ss_pred             EEEECCCCCCCC-c-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccCCCCCchhHHHHHHHH
Confidence            999999975332 2 3578899999999999999999999999997 33 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.|++++||++|+|+||+++|++.......       .+........  ...|.+|+.+|+|+|++++||+++.
T Consensus       159 ~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~-------~~~~~~~~~~--~~~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        159 QLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG-------DRAKADRVAA--PFHLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             HHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc-------chhHHHHhhc--ccCCCCCccCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999986543210       1111111111  1236789999999999999999998


Q ss_pred             CCCceeeEEeecCCcccCc
Q 023708          252 AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~~  270 (278)
                      ..++||++|.+|||++..-
T Consensus       230 ~~~~tG~~i~vdgg~~~~~  248 (261)
T PRK08265        230 ASFVTGADYAVDGGYSALG  248 (261)
T ss_pred             ccCccCcEEEECCCeeccC
Confidence            9999999999999987543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.4e-43  Score=300.86  Aligned_cols=247  Identities=27%  Similarity=0.397  Sum_probs=208.3

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALAST-IGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      |+..++++|++|||||++|||++++++|++.|++|+++++...  ..+.+.+. ..+.++++|++|.++++++++++.++
T Consensus         3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4455789999999999999999999999999999998876532  12222211 12567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..|++|++||..+..+.+....|+++
T Consensus        83 ~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         83 FGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            99999999999976 34567889999999999999999999999999999876546899999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|+++++++++.|+.++||+||.|+||+++|++......        ..........   ..|.+|+..|+|+|+.++|
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~--------~~~~~~~~~~---~~p~~r~~~p~eva~~~~~  230 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA--------DEQRSAEILD---RIPAGRWGLPSDLMGPVVF  230 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc--------chHHHHHHHh---cCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998653210        1111112222   3367999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...+++|+++.+|||+..
T Consensus       231 l~s~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        231 LASSASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             HhCccccCccCcEEEECCCEec
Confidence            9999999999999999999753

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-43  Score=301.56  Aligned_cols=242  Identities=30%  Similarity=0.420  Sum_probs=205.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+ ..+++.+.+     ++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998643 233333222     3567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC--Cchhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA--SHAYS  164 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--~~~Y~  164 (278)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.++  ...|+
T Consensus        84 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~  161 (254)
T PRK06114         84 LGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHYN  161 (254)
T ss_pred             cCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcchHH
Confidence            999999999999864 35778899999999999999999999999999998755 689999999998876554  67999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ++|+|+++++++++.|++++||+||.|+||+++|++....        . ..+......   ...|++|+.+|||+++.+
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--------~-~~~~~~~~~---~~~p~~r~~~~~dva~~~  229 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--------E-MVHQTKLFE---EQTPMQRMAKVDEMVGPA  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--------c-chHHHHHHH---hcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999985420        0 011111222   223679999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++.++++||+++.+|||++.
T Consensus       230 ~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        230 VFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             HHHcCccccCcCCceEEECcCEec
Confidence            999999999999999999999863

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-43  Score=301.60  Aligned_cols=242  Identities=24%  Similarity=0.212  Sum_probs=200.1

Q ss_pred             CCCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILD--ELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|+++||||  ++|||+++|++|+++|++|++++|+.  +..+++.+++  .+.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            3578999999999  89999999999999999999998753  4445554443  3568899999999999999999999


Q ss_pred             cCCccEEEECCccCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           87 KGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +|++|+||||||+....   .++.+.++++|++.+++|+.+++.+++.++|.|.+   .|+||++++.. ..+.+.+..|
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~~~~~~~~Y  158 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TVAWPAYDWM  158 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-cccCCccchh
Confidence            99999999999976321   35678889999999999999999999999999964   47999998753 4556777789


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC-CCCCHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG-RSASIEDVAQ  242 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~edva~  242 (278)
                      ++||+|+.+|+++++.|++++||+||+|+||.++|++.....         ...+.......  ..|.+ |+.+|+|+|+
T Consensus       159 ~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~~~~~~p~evA~  227 (256)
T PRK07889        159 GVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP---------GFELLEEGWDE--RAPLGWDVKDPTPVAR  227 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc---------CcHHHHHHHHh--cCccccccCCHHHHHH
Confidence            999999999999999999999999999999999999754211         11111111111  22556 6899999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      .++||+++...+++|+++.+|||++..
T Consensus       228 ~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        228 AVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             HHHHHhCcccccccceEEEEcCceecc
Confidence            999999999999999999999998753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=299.59  Aligned_cols=244  Identities=30%  Similarity=0.395  Sum_probs=211.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+...+..+++     ++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999877766654433     24567899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||+|.. ...++.+.+.++|++.+++|+.+++.+++++.+.+.+++ .++||++||..+..+.++...|+++|
T Consensus        85 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 GPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHHHH
Confidence            9999999999975 445778899999999999999999999999999997654 68999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.++++++.|++++||++|+|+||+++|++.....         ..++......  ...|.+++++|||+|+++.||
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~---------~~~~~~~~~~--~~~p~~~~~~~~~va~~~~~l  231 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV---------EDEAFTAWLC--KRTPAARWGDPQELIGAAVFL  231 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc---------cCHHHHHHHH--hcCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999865422         1112222222  224679999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++.++++||+++.+|||++..
T Consensus       232 ~~~~~~~i~G~~i~~dgg~~~~  253 (254)
T PRK08085        232 SSKASDFVNGHLLFVDGGMLVA  253 (254)
T ss_pred             hCccccCCcCCEEEECCCeeec
Confidence            9999999999999999998764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.7e-43  Score=304.64  Aligned_cols=269  Identities=42%  Similarity=0.729  Sum_probs=219.8

Q ss_pred             CCCcccCCccc-cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHH
Q 023708            1 MEARDDTNKLS-SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEED   75 (278)
Q Consensus         1 ~~~~~~~~~~~-~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~   75 (278)
                      |++.++.++.. ..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+    ++.++++|++|.++
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   80 (280)
T PLN02253          1 MATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDD   80 (280)
T ss_pred             CCcchhhhccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHH
Confidence            55555555543 34688999999999999999999999999999999999876665555443    36788999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      ++++++++.+.+|++|+||||||.... ..++.+.+.++|++.+++|+.+++++++++++.|.+++ .|++|+++|..+.
T Consensus        81 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~  159 (280)
T PLN02253         81 VSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASA  159 (280)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhc
Confidence            999999999999999999999997643 24577899999999999999999999999999997654 6899999999998


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HH---HHHhhcCCCC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VC---KMVRDSGSLL  230 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~  230 (278)
                      .+.++...|++||++++++++.++.|++++||+|+.++||.++|++........     ..... ..   .......+ .
T Consensus       160 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-l  233 (280)
T PLN02253        160 IGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPED-----ERTEDALAGFRAFAGKNAN-L  233 (280)
T ss_pred             ccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccc-----cchhhhhhhhHHHhhcCCC-C
Confidence            888888899999999999999999999999999999999999998754321100     00011 11   11111111 2


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcCccccc
Q 023708          231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFI  276 (278)
Q Consensus       231 ~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~~~~  276 (278)
                      .++..+|+|+|++++||+++...|++|+++.+|||++...+.++.+
T Consensus       234 ~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~~~  279 (280)
T PLN02253        234 KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHSLRVF  279 (280)
T ss_pred             cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhccchheec
Confidence            2566899999999999999999999999999999999888777654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-43  Score=304.22  Aligned_cols=243  Identities=29%  Similarity=0.425  Sum_probs=205.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch---------HHHHHHHhhh-----CCeEEEecCCCHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD---------ELGAALASTI-----GGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~---------~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~   79 (278)
                      .+++|++|||||++|||+++|++|+++|++|++++++.         +...++.+++     ++.++.+|++|.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36789999999999999999999999999999988764         4444444433     256788999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-----CcEEEEecCchhh
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-----KGSIICTSSSAAI  154 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~iv~vsS~~~~  154 (278)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.++..     .|+||++||..+.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            9999999999999999999864 357889999999999999999999999999999975321     3799999999999


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC--
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG--  232 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  232 (278)
                      .+.+++..|++||+|+++|+++++.|++++||+||+|+|| +.|++.......              .....   +.+  
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~--------------~~~~~---~~~~~  223 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE--------------MMAKP---EEGEF  223 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH--------------HHhcC---ccccc
Confidence            9999999999999999999999999999999999999999 788876432211              00100   112  


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcCcccc
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      +..+|||+|++++||+++...+++|++|.+|||+......++.
T Consensus       224 ~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~  266 (286)
T PRK07791        224 DAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVAEGWRH  266 (286)
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEechhhc
Confidence            4679999999999999999999999999999999876655543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2e-43  Score=301.44  Aligned_cols=251  Identities=31%  Similarity=0.369  Sum_probs=208.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++|++|||||++|||++++++|+++|++|++++|+++..+.+.++..  +.++++|+++.++++++++++.+.++++|
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            3678999999999999999999999999999999999887777665543  56789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHH----HHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           92 IMFNNAGISGSGGSITSLNMED----VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +||||||+.....++.+.+.++    |++.+++|+.+++.++++++|.|.++  .+++|+++|..+..+.++...|++||
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sK  160 (263)
T PRK06200         83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYTASK  160 (263)
T ss_pred             EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCCchhHHHH
Confidence            9999999864445666667665    88999999999999999999998753  48999999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhcc-CCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      ++++.|+++++.|+++ +|+||+|+||+++|++........... ....++. .+...  ...|++|+.+|+|+|++++|
T Consensus       161 ~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~p~~r~~~~~eva~~~~f  236 (263)
T PRK06200        161 HAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIA--AITPLQFAPQPEDHTGPYVL  236 (263)
T ss_pred             HHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhh--cCCCCCCCCCHHHHhhhhhh
Confidence            9999999999999987 599999999999999854211000000 0001111 12222  22477999999999999999


Q ss_pred             hccCC-CCCceeeEEeecCCcccCc
Q 023708          247 LASEE-AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       247 l~s~~-~~~~tG~~i~~dgG~~~~~  270 (278)
                      |+++. ..++||++|.+|||+++..
T Consensus       237 l~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        237 LASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             eecccccCcccceEEEEcCceeecc
Confidence            99988 9999999999999987654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=6.2e-43  Score=300.79  Aligned_cols=248  Identities=32%  Similarity=0.386  Sum_probs=210.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|+++++++.++++++.++++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999877666655443     256789999999999999999999999


Q ss_pred             CccEEEECCccCCCC--------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           89 QLDIMFNNAGISGSG--------------GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        89 ~id~li~nag~~~~~--------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      ++|+||||||.....              .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~  165 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAF  165 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc
Confidence            999999999965321              3467888999999999999999999999999998755 6899999999999


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                      .+.++...|++||++++.|+++++.+++++||++|.|+||+++|++.......    ......+......  ...|.+|+
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~--~~~p~~r~  239 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFN----EDGSLTERANKIL--AHTPMGRF  239 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcc----ccccchhHHHHHh--ccCCccCC
Confidence            99999999999999999999999999999999999999999999986543211    1111111111111  22467999


Q ss_pred             CCHHHHHHHHHHhccC-CCCCceeeEEeecCCccc
Q 023708          235 ASIEDVAQAALFLASE-EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~~edva~~~~~l~s~-~~~~~tG~~i~~dgG~~~  268 (278)
                      ++|+|+|++++||+++ .+.++||+++.+|||++.
T Consensus       240 ~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        240 GKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             CCHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            9999999999999999 899999999999999863

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=4.1e-43  Score=304.19  Aligned_cols=242  Identities=26%  Similarity=0.332  Sum_probs=205.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD--ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|..  +..+++.+..     ++.++.+|++|.+++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999987642  2333333221     2567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++...|+++
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccCCCCcchhHHH
Confidence            9999999999997544457888999999999999999999999999999965   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++++++.++.|++++||++|+|+||+++|++....        ....+....+..   ..|.+|+.+|+|+|++++|
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~---~~~~~r~~~pedva~~~~f  271 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQ---QTPMKRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc--------CCCHHHHHHHhc---cCCCCCCCCHHHHHHHHHh
Confidence            99999999999999999999999999999999975210        011122222222   2367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...++||+.+.+|||+.++
T Consensus       272 L~s~~~~~itG~~i~vdgG~~~~  294 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGEHLG  294 (294)
T ss_pred             hhChhcCCccccEEeeCCCeeCc
Confidence            99999999999999999998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-42  Score=294.35  Aligned_cols=246  Identities=27%  Similarity=0.397  Sum_probs=213.3

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      |+..++++|++|||||+++||++++++|+++|++|++.+|+++..++..+.+     ++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          3 LNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4455788999999999999999999999999999999999987766554443     25678899999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+
T Consensus        83 ~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~  160 (255)
T PRK07523         83 AEIGPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYT  160 (255)
T ss_pred             HhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHH
Confidence            99999999999999863 46788899999999999999999999999999998755 68999999999988899999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ++|++++.+++.++.|++++||+|+.|+||+++|++.....         ...........  ..|.+|+..|+|+|+++
T Consensus       161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~dva~~~  229 (255)
T PRK07523        161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV---------ADPEFSAWLEK--RTPAGRWGKVEELVGAC  229 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc---------cCHHHHHHHHh--cCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999865432         11122222222  23668999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...+++|+.+.+|||++.
T Consensus       230 ~~l~~~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        230 VFLASDASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             HHHcCchhcCccCcEEEECCCeec
Confidence            999999899999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-42  Score=294.50  Aligned_cols=239  Identities=30%  Similarity=0.357  Sum_probs=200.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh--
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW--   86 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~--   86 (278)
                      +++|++|||||++|||++++++|++.|++|+++. |.++..++...++     .+..+.+|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999999874 5555544443332     2457889999999999999888753  


Q ss_pred             --cC--CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           87 --KG--QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        87 --~g--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                        ++  ++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCCCchh
Confidence              34  899999999975 4456788999999999999999999999999999965   479999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++++++++.|++++||++|+|+||+++|++.....         ............  .|.+|+.+|+|+|+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~dva~  226 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELL---------SDPMMKQYATTI--SAFNRLGEVEDIAD  226 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcc---------cCHHHHHHHHhc--CcccCCCCHHHHHH
Confidence            9999999999999999999999999999999999999865422         111111121111  15688999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++||+++...+++|+.+.+|||+++
T Consensus       227 ~~~~l~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        227 TAAFLASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             HHHHHcCccccCcCCcEEEecCCccC
Confidence            99999999899999999999999864

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-42  Score=293.16  Aligned_cols=245  Identities=36%  Similarity=0.554  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+...+..+.+     ++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999877665544332     36778999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|++|||+|......++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+++..|+++|
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHHH
Confidence            99999999999865555678899999999999999999999999999998754 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.|+++++.++.++||+|++|+||.++|++..+...       ..+........   ..|.+|..+|+|+++.++||
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~p~~ia~~~~~l  231 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-------ADPRKAEFAAA---MHPVGRIGKVEEVASAVLYL  231 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-------cChHHHHHHhc---cCCCCCccCHHHHHHHHHHH
Confidence            999999999999999999999999999999998765321       01222222222   23568899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++.+.+++|++|.+|||+++
T Consensus       232 ~~~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        232 CSDGASFTTGHALMVDGGATA  252 (253)
T ss_pred             hCccccCcCCcEEEECCCccC
Confidence            999999999999999999854

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.9e-42  Score=292.27  Aligned_cols=248  Identities=31%  Similarity=0.466  Sum_probs=210.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|||||++|||+++++.|+++|++|++++|+.+....+...+     ++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999877666554432     256789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+..++||++||..+..+.++...|+++|++++
T Consensus        82 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         82 VVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            999999976 4457788899999999999999999999999999987554589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      .+++.++.|+.++||+|++|+||+++|++..............+.+. .....   ...+.+|+.+|||+|++++||+++
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~va~~~~~L~~~  237 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA---KDITLGRLSEPEDVANCVSFLAGP  237 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh---ccCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999865432211111111111 11122   223678999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ...+++|+++.+|||+++
T Consensus       238 ~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        238 DSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             cccCccCcEEEeCCCeec
Confidence            999999999999999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-42  Score=291.96  Aligned_cols=252  Identities=34%  Similarity=0.485  Sum_probs=214.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+.+|++|||||++|||+++++.|+++|++|++++|+.+....+.+..+  +.++.+|++|.++++++++++.+.++++|
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999999887777665543  56789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..+..+.++...|++||++++
T Consensus        83 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  161 (257)
T PRK07067         83 ILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVI  161 (257)
T ss_pred             EEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHH
Confidence            999999976 3467788899999999999999999999999999977544579999999999889999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.|+.++||+++.|+||.++|+++..............+.+......  ...|.+|+.+|+|+|++++||+++.
T Consensus       162 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~s~~  239 (257)
T PRK07067        162 SYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVG--EAVPLGRMGVPDDLTGMALFLASAD  239 (257)
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHh--hcCCCCCccCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999998764321111111122333222222  2236799999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++|+++++|||..+
T Consensus       240 ~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        240 ADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             cccccCcEEeecCCEeC
Confidence            99999999999999764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-42  Score=294.97  Aligned_cols=244  Identities=30%  Similarity=0.427  Sum_probs=207.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh---hh--CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS---TI--GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~---~~--~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ...++++|++|||||++|||++++++|+++|++|++++|++ ..+++.+   ..  ++.++.+|+++.++++++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999998873 3333322   21  356889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+....|++
T Consensus        88 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  165 (258)
T PRK06935         88 EFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTA  165 (258)
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhHH
Confidence            999999999999976 345778889999999999999999999999999998765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|++++++++++++|+.++||+||.|+||+++|++......        .+........   ..|.+|+.+|+|+|+.++
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~dva~~~~  234 (258)
T PRK06935        166 SKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA--------DKNRNDEILK---RIPAGRWGEPDDLMGAAV  234 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc--------ChHHHHHHHh---cCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999997543210        1111122222   236789999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++...+++|+++.+|||+..
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        235 FLASRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             HHcChhhcCCCCCEEEECCCeec
Confidence            99999999999999999999753

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-42  Score=291.90  Aligned_cols=243  Identities=30%  Similarity=0.442  Sum_probs=210.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++     ...++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3688999999999999999999999999999999999877666655443     25678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+.+ .++++++||..+..+.++...|++||
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHHH
Confidence            99999999999754445678889999999999999999999999999998754 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++++++++.|+.++||++++|+||.++|++......        .+.......   ...|.+|..+|+|+|+.++||
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~va~~~~~l  231 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK--------NDAILKQAL---AHIPLRRHAEPSEMAGAVLYL  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC--------CHHHHHHHH---ccCCCCCcCCHHHHHHHHHHH
Confidence            999999999999999999999999999999998654321        111111211   223668899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++...+++|+++.+|||++
T Consensus       232 ~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        232 ASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             hCccccCccCCEEEeCCCcC
Confidence            99999999999999999975

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-42  Score=292.24  Aligned_cols=244  Identities=32%  Similarity=0.472  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++.+|+++||||++|||+++|++|+++|++|+++.+.. +..+++.+. ++.++.+|++|+++++++++++.+.++++|
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999876653 333344332 577899999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCCCCchhhhhHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLASHAYSLSKEAI  170 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~sK~a~  170 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+.. +.++...|++||+|+
T Consensus        82 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  159 (255)
T PRK06463         82 VLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAITKAGI  159 (255)
T ss_pred             EEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHHHHHH
Confidence            999999986 345778889999999999999999999999999998654 68999999998874 456778899999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|++++||+|+.|+||+++|++......     . ...........  ...|.+++.+|+|+|++++||+++
T Consensus       160 ~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~-----~-~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~s~  231 (255)
T PRK06463        160 IILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS-----Q-EEAEKLRELFR--NKTVLKTTGKPEDIANIVLFLASD  231 (255)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC-----c-cchHHHHHHHH--hCCCcCCCcCHHHHHHHHHHHcCh
Confidence            999999999999999999999999999998643210     0 00111111111  123678899999999999999999


Q ss_pred             CCCCceeeEEeecCCcc
Q 023708          251 EAGFITAHNLVIDGGYT  267 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~  267 (278)
                      ...+++|+++.+|||..
T Consensus       232 ~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        232 DARYITGQVIVADGGRI  248 (255)
T ss_pred             hhcCCCCCEEEECCCee
Confidence            99999999999999976

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-42  Score=291.48  Aligned_cols=252  Identities=30%  Similarity=0.384  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..  .  ..++.++.+|++|.++++++++++.+.++++|+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468899999999999999999999999999999999986532  1  123668899999999999999999999999999


Q ss_pred             EEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-CCchhhhhHHHH
Q 023708           93 MFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEAI  170 (278)
Q Consensus        93 li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~a~  170 (278)
                      ||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+ +...|+++|+++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~  159 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAAAKAAL  159 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchhHHHHHHH
Confidence            999999653 234677889999999999999999999999999998754 58999999999988765 788999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHH-HhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM-VRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++|++.++.+++++||+++.|+||.++|++..............++++..+. .......|.+|..+|+|+|++++||++
T Consensus       160 ~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s  239 (260)
T PRK06523        160 STYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLAS  239 (260)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999987654332211112233333222 222233477899999999999999999


Q ss_pred             CCCCCceeeEEeecCCcccC
Q 023708          250 EEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +...+++|+++.+|||+..+
T Consensus       240 ~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        240 DRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             cccccccCceEEecCCccCC
Confidence            99999999999999998764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-42  Score=299.27  Aligned_cols=247  Identities=23%  Similarity=0.195  Sum_probs=195.2

Q ss_pred             cccCCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh-------------hh-------CCeEEE
Q 023708           10 LSSKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALAS-------------TI-------GGRYIH   67 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~-------------~~-------~~~~~~   67 (278)
                      |+..++.||++|||||+  +|||+++|+.|+++|++|++.++.+ .++....             ..       ....+.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            34668899999999995  9999999999999999999976431 0000000             00       000112


Q ss_pred             ecCCCH------------------HHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHH
Q 023708           68 CDVTKE------------------EDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHG  128 (278)
Q Consensus        68 ~D~~~~------------------~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l  128 (278)
                      +|+++.                  ++++++++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++++
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            333333                  4689999999999999999999999753 246788999999999999999999999


Q ss_pred             HHHHHHHHHccCCCcEEEEecCchhhcCCCCCc-hhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHH
Q 023708          129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYR  206 (278)
Q Consensus       129 ~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~-~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~  206 (278)
                      +++++|.|.+   .|++|+++|..+..+.++.. .|++||+|+++|+++++.|+++ +|||||+|+||+++|++..... 
T Consensus       160 ~~a~~p~m~~---~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~-  235 (299)
T PRK06300        160 LSHFGPIMNP---GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG-  235 (299)
T ss_pred             HHHHHHHhhc---CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc-
Confidence            9999999965   47899999999988888765 8999999999999999999987 5999999999999999754210 


Q ss_pred             hhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                              .+++.......  ..|++|..+|+|+++.++||+++.+.++||+++.+|||+++..-
T Consensus       236 --------~~~~~~~~~~~--~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  290 (299)
T PRK06300        236 --------FIERMVDYYQD--WAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGI  290 (299)
T ss_pred             --------ccHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecC
Confidence                    11111111111  23668999999999999999999999999999999999886543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=8.8e-43  Score=297.41  Aligned_cols=250  Identities=27%  Similarity=0.384  Sum_probs=204.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+..  .+.++.+|+++.+++.++++++.+.++++|
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999999999987777765543  356789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCH----HHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           92 IMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~----~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +||||||+.....++.+.+.    ++|++.+++|+.+++.++++++|.|.++  .+++|+++|..+..+.++...|++||
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sK  159 (262)
T TIGR03325        82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAAK  159 (262)
T ss_pred             EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCCCCchhHHHH
Confidence            99999997533334444443    5799999999999999999999999763  47899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++|+++++.|++++ |+||+|+||+++|++....... .................  ..|++|+.+|+|+|++++||
T Consensus       160 aa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~p~~r~~~p~eva~~~~~l  235 (262)
T TIGR03325       160 HAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLG-MADKSISTVPLGDMLKS--VLPIGRMPDAEEYTGAYVFF  235 (262)
T ss_pred             HHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccc-cccccccccchhhhhhh--cCCCCCCCChHHhhhheeee
Confidence            99999999999999986 9999999999999986431100 00000011111222222  23679999999999999999


Q ss_pred             ccCC-CCCceeeEEeecCCcccC
Q 023708          248 ASEE-AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       248 ~s~~-~~~~tG~~i~~dgG~~~~  269 (278)
                      +++. +.++||++|.+|||+...
T Consensus       236 ~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       236 ATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             ecCCCcccccceEEEecCCeeec
Confidence            9974 678999999999998754

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=296.84  Aligned_cols=252  Identities=30%  Similarity=0.435  Sum_probs=207.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++++++...    ..++.++.+|++++++++++++++.+.++++|+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999999999999999999999999999999998765432    124567899999999999999999999999999


Q ss_pred             EEECCccCCCC--------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           93 MFNNAGISGSG--------GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        93 li~nag~~~~~--------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ||||||.....        .++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  159 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSCYA  159 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCchhH
Confidence            99999975321        1235688999999999999999999999999998754 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCC-ChhhHHHHHhhh-ccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVP-SEMLVNAYRKYL-GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ++|+++++|+++++.|++++||++|.|+||.++ |++....+.... ......+.+..+........|++|.+.|+|+|+
T Consensus       160 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~  239 (266)
T PRK06171        160 ATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVAD  239 (266)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhh
Confidence            999999999999999999999999999999996 665432221111 011122233322222211347899999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++.||+++.+.++||++|.+|||++.|
T Consensus       240 ~~~fl~s~~~~~itG~~i~vdgg~~~~  266 (266)
T PRK06171        240 LVCYLLSDRASYITGVTTNIAGGKTRG  266 (266)
T ss_pred             heeeeeccccccceeeEEEecCcccCC
Confidence            999999999999999999999998865

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=290.69  Aligned_cols=243  Identities=27%  Similarity=0.402  Sum_probs=208.2

Q ss_pred             ccCCCCCcEEEEeCCCC-hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGAR-GIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~-giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ....+++|++|||||++ |||+++++.|+++|++|++++|+.+..++..+.+       ++.++++|+++++++++++++
T Consensus        11 ~~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   90 (262)
T PRK07831         11 GHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDA   90 (262)
T ss_pred             cccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            34556799999999985 9999999999999999999999876665544322       356788999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+....++||+++|..+..+.++...
T Consensus        91 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~  169 (262)
T PRK07831         91 AVERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAH  169 (262)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcc
Confidence            999999999999999975 3467888999999999999999999999999999987543689999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+++|+++++++++++.|++++||+|+.|+||+++|++.....         +++.......   ..|++|..+|+|+|+
T Consensus       170 Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~---------~~~~~~~~~~---~~~~~r~~~p~~va~  237 (262)
T PRK07831        170 YAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT---------SAELLDELAA---REAFGRAAEPWEVAN  237 (262)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc---------CHHHHHHHHh---cCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999754211         1222222222   225789999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +++||+++.+.++||+++.+|+++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCCC
Confidence            999999999999999999999975

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2e-42  Score=288.31  Aligned_cols=219  Identities=26%  Similarity=0.338  Sum_probs=195.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++++||||||+|||+++|+.|+++|++|++++|+++++.++.+++.      +.++.+|+++.+++.++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999999998887664      5688999999999999999999998


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ++||+||||||+. ..+++.+.++++.++++++|+.++..|+++++|.|.+++ .|+||+|+|.++..|.|....|++||
T Consensus        83 ~~IdvLVNNAG~g-~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcC-CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHHH
Confidence            8999999999987 446899999999999999999999999999999999976 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++.+|+++|+.|+.++||+|..|+||++.|+++....           .....      ..+.....+|+++|+..+..
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~-----------~~~~~------~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKG-----------SDVYL------LSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccc-----------ccccc------ccchhhccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999875110           00000      01234578999999999999


Q ss_pred             ccCC
Q 023708          248 ASEE  251 (278)
Q Consensus       248 ~s~~  251 (278)
                      +...
T Consensus       224 l~~~  227 (265)
T COG0300         224 LEKG  227 (265)
T ss_pred             HhcC
Confidence            8654

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=288.10  Aligned_cols=243  Identities=37%  Similarity=0.524  Sum_probs=208.2

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST--IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+......+.  ....++.+|+++.++++++++++.+.+++
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3568899999999999999999999999999999999986543322221  12457899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|++|||||.. ...++.+.+.++|++.+++|+.+++++++.+.+.|.+++ .+++|++||..+..+.+....|+++|++
T Consensus        90 ~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  167 (255)
T PRK06841         90 IDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKAG  167 (255)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCCCchHHHHHHH
Confidence            99999999986 345677889999999999999999999999999998755 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.++++++.+++++||+++.|+||+++|++....+         ..........   ..|.+++.+|+|+|+++++|++
T Consensus       168 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~  235 (255)
T PRK06841        168 VVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW---------AGEKGERAKK---LIPAGRFAYPEEIAAAALFLAS  235 (255)
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc---------chhHHHHHHh---cCCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999764322         1111111111   2366899999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.|.+|||+.+
T Consensus       236 ~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        236 DAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             ccccCccCCEEEECCCccC
Confidence            9999999999999999865

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=287.84  Aligned_cols=240  Identities=29%  Similarity=0.379  Sum_probs=206.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.  . ....++.++++|+++.++++++++++.+.++++|+|
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999998654  1 112246788999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.++...++||++||..+..+.++...|+++|+++++|
T Consensus        80 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l  158 (252)
T PRK07856         80 VNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNL  158 (252)
T ss_pred             EECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHH
Confidence            9999976 445677889999999999999999999999999998754468999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      ++.++.|+.++ |+++.|+||+++|++......        +++.......   ..|.+|..+|+|+|+.++||+++...
T Consensus       159 ~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~p~~va~~~~~L~~~~~~  226 (252)
T PRK07856        159 TRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYG--------DAEGIAAVAA---TVPLGRLATPADIAWACLFLASDLAS  226 (252)
T ss_pred             HHHHHHHhcCC-eEEEEEEeccccChHHhhhcc--------CHHHHHHHhh---cCCCCCCcCHHHHHHHHHHHcCcccC
Confidence            99999999987 999999999999998653220        2222222222   23678999999999999999999889


Q ss_pred             CceeeEEeecCCcccC
Q 023708          254 FITAHNLVIDGGYTTG  269 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~  269 (278)
                      +++|+.|.+|||....
T Consensus       227 ~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        227 YVSGANLEVHGGGERP  242 (252)
T ss_pred             CccCCEEEECCCcchH
Confidence            9999999999998653

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=6.2e-42  Score=297.77  Aligned_cols=241  Identities=27%  Similarity=0.344  Sum_probs=204.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .|++|++|||||++|||+++++.|+++|++|+++.+..+  ..+++.+.+     ++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999998876432  222222221     2567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..++.+.++...|++|
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCCCchhHHHH
Confidence            9999999999998655567889999999999999999999999999999864   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|+++++.++.++||+||+|.||+++|++....        ....+....+..   ..|.+|++.|+|+|.+++|
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--------~~~~~~~~~~~~---~~p~~r~~~p~dva~~~~~  277 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--------GQPPEKIPDFGS---ETPMKRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--------CCCHHHHHHHhc---CCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999975321        011222222211   2367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...+++|++|.+|||+.+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            9999899999999999999764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-41  Score=288.28  Aligned_cols=248  Identities=27%  Similarity=0.354  Sum_probs=201.5

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +...|++|++|||||++|||++++++|+++|++|++++|++. ..++.+++     .+.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            344578999999999999999999999999999999999753 22333222     256788999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .++++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..  +...+|++
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~Y~~  157 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG--INRVPYSA  157 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC--CCCCccHH
Confidence            9999999999999654456788999999999999999999999999999998755 58999999987652  34568999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhh--cc-CCCCHHHH-HHHHhhcCCCCCCCCCCHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL--GK-ADMKPEEV-CKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~edva  241 (278)
                      ||++++.|+++++.|++++||++++|+||.++|++..... ...  .. ......+. .....   ..|++++++|+|+|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva  233 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPR-NAAPQSEQEKAWYQQIVDQTLD---SSLMKRYGTIDEQV  233 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHH-hhccccccccccHHHHHHHHhc---cCCcccCCCHHHHH
Confidence            9999999999999999999999999999999998643211 000  00 00011111 11211   23678999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ++++||+++...+++|+.+++|||.
T Consensus       234 ~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        234 AAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHcCcccccccCcEEeecCCC
Confidence            9999999998899999999999986

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-41  Score=286.96  Aligned_cols=248  Identities=24%  Similarity=0.328  Sum_probs=207.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +++++|++||||+++|||+++++.|+++|++|++++|+.+..+++.+++      ++.++.+|++++++++++++.    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3578999999999999999999999999999999999887766654432      256789999999999888764    


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|++|||+|.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|+++
T Consensus        79 ~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 AGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHHH
Confidence            57899999999986 446788999999999999999999999999999998754 5899999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|+.++||+||+|+||+++|++....+.........+++......   ...|.+++.+|+|+|++++|
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~va~~~~~  233 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL---AGLPLGRPATPEEVADLVAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh---ccCCcCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999876544321111111222222222   23366899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...+++|+.+.+|||++..
T Consensus       234 l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        234 LASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             HcCchhccccCceEEecCCeeec
Confidence            99998999999999999998743

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.9e-41  Score=286.59  Aligned_cols=242  Identities=29%  Similarity=0.419  Sum_probs=204.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++++|++|||||++|||.+++++|+++|++|++++|+... ..+.....  ++.++.+|+++.+++.++++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999987521 11222222  35788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |++|||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.+++..+++|++||..+..+.+....|+++|+++
T Consensus        82 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  160 (248)
T TIGR01832        82 DILVNNAGIIRR-ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGV  160 (248)
T ss_pred             CEEEECCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHH
Confidence            999999998643 5677888999999999999999999999999997654358999999999998888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +++++++++++.++||+|++|+||+++|++......        ..........   ..|.+++.+|+|+|++++||+++
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~s~  229 (248)
T TIGR01832       161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA--------DEDRNAAILE---RIPAGRWGTPDDIGGPAVFLASS  229 (248)
T ss_pred             HHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc--------ChHHHHHHHh---cCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999997643210        1111111222   23668999999999999999999


Q ss_pred             CCCCceeeEEeecCCcc
Q 023708          251 EAGFITAHNLVIDGGYT  267 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~  267 (278)
                      ...+++|+++.+|||+.
T Consensus       230 ~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       230 ASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             cccCcCCcEEEeCCCEe
Confidence            89999999999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-44  Score=273.28  Aligned_cols=241  Identities=25%  Similarity=0.353  Sum_probs=213.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .-+|.|+++++||+..|||++++..|++.|++|+.+.|+++.+..+.++..  +..+..|+++.+.+.+.+..    .++
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~----v~p   77 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVP----VFP   77 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcc----cCc
Confidence            346889999999999999999999999999999999999999998887765  45678999997766666543    368


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|.||||||+. ...++.+++.+++++.|++|+.+++.+.|...+-+..+..+|.||++||.++.++..+...|+++|+|
T Consensus        78 idgLVNNAgvA-~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaA  156 (245)
T KOG1207|consen   78 IDGLVNNAGVA-TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAA  156 (245)
T ss_pred             hhhhhccchhh-hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHH
Confidence            99999999986 55799999999999999999999999999988888776668999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +++++|+++.|+++++||||+|+|..+.|.|-++.|+        +|.....++..   +|++|+..++|+.++++||+|
T Consensus       157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS--------DP~K~k~mL~r---iPl~rFaEV~eVVnA~lfLLS  225 (245)
T KOG1207|consen  157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS--------DPDKKKKMLDR---IPLKRFAEVDEVVNAVLFLLS  225 (245)
T ss_pred             HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC--------Cchhccchhhh---CchhhhhHHHHHHhhheeeee
Confidence            9999999999999999999999999999999988774        23333334433   478999999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +..+..||+++.++||++-
T Consensus       226 d~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  226 DNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             cCcCcccCceeeecCCccC
Confidence            9999999999999999974

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-41  Score=314.67  Aligned_cols=243  Identities=34%  Similarity=0.459  Sum_probs=211.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+++..+++.+..+  +..+.+|++|+++++++++++.+.+|++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999999888777766543  45688999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||......++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|+++|++++
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ---GGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc---CCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999998655567888999999999999999999999999999932   589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+++++.|++++||+||+|+||+++|++......       ...........   ..|.+|+.+|+|+|++++||+++.
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKA-------SGRADFDSIRR---RIPLGRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcc-------ccHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999998654220       01112222222   236688999999999999999998


Q ss_pred             CCCceeeEEeecCCcccC
Q 023708          252 AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~  269 (278)
                      ..++||+.+.+|||+...
T Consensus       493 ~~~~~G~~i~vdgg~~~~  510 (520)
T PRK06484        493 ASYVNGATLTVDGGWTAF  510 (520)
T ss_pred             ccCccCcEEEECCCccCC
Confidence            999999999999997643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-41  Score=285.82  Aligned_cols=252  Identities=30%  Similarity=0.389  Sum_probs=213.9

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +...++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+     ++.++++|+++.++++++++++.
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4566889999999999999999999999999999999999877666554433     36678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.++++|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.+++..|+
T Consensus        83 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKR-IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYA  160 (265)
T ss_pred             HhCCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCccHH
Confidence            999999999999998743 5778899999999999999999999999999998754 78999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ++|++++.+++++++++.++||+|++|.||.++|++....... ..+.  ...........  ..|.+++.+|+|+|+.+
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~--~~~~~~~~~~~--~~~~~~~~~~~dva~~~  235 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLREL-QADG--SRHPFDQFIIA--KTPAARWGDPEDLAGPA  235 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhc-cccc--cchhHHHHHHh--cCCccCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999987653210 0010  11112222211  22568899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++|+++..++++|+.+.+|||...
T Consensus       236 ~~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        236 VFLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             HHHhCcccCCCCCCEEEECCCcee
Confidence            999998889999999999999764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.9e-41  Score=284.82  Aligned_cols=235  Identities=28%  Similarity=0.329  Sum_probs=200.6

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecc-----------hHHHHHHHhhh-----CCeEEEecCCCHHH
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADIL-----------DELGAALASTI-----GGRYIHCDVTKEED   75 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~-----------~~~~~~~~~~~-----~~~~~~~D~~~~~~   75 (278)
                      +|++|++|||||+  +|||+++|++|+++|++|++++|.           .+...+..+++     .+.++++|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            6889999999999  599999999999999999987532           12222222222     25678999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ++++++++.+.+|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC
Confidence            99999999999999999999999863 35788999999999999999999999999999998755 68999999999999


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA  235 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
                      +.+++..|+++|++++.|+++++.++.++||++++|+||+++|++.....             .....   ...|.++..
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~-------------~~~~~---~~~~~~~~~  224 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI-------------KQGLL---PMFPFGRIG  224 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH-------------HHHHH---hcCCCCCCc
Confidence            99999999999999999999999999999999999999999998643211             11111   123568889


Q ss_pred             CHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          236 SIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +|+|+|+.++||+++...+++|+++.+|||+
T Consensus       225 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        225 EPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            9999999999999998999999999999995

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-41  Score=286.14  Aligned_cols=244  Identities=33%  Similarity=0.441  Sum_probs=207.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++++.|+++|++|+++.|+. +....+.+.+     ++.++.+|++|.+++.++++++.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999988853 3333333222     255789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++..+++|++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         82 EFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            9999999999999763 356788899999999999999999999999999987554689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|+|++++++.++.++.+.||+|++|+||+++|++....+        ..++......   ...|.+++.+|+|+++.++
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~va~~~~  229 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF--------ADPKQRADVE---SMIPMGYIGKPEEIAAVAA  229 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc--------CCHHHHHHHH---hcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999754321        0222222221   2236789999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcc
Q 023708          246 FLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ||+++...+++|+++.+|||++
T Consensus       230 ~l~s~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        230 WLASSEASYVTGITLFADGGMT  251 (261)
T ss_pred             HHcCcccCCccCcEEEECCCcc
Confidence            9999999999999999999977

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-40  Score=283.17  Aligned_cols=247  Identities=30%  Similarity=0.428  Sum_probs=213.3

Q ss_pred             CccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHH
Q 023708            8 NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus         8 ~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +.+.+.++++|+++||||+++||++++++|+++|++|++++|+++..+++.+++     ++.++.+|+++++++.+++++
T Consensus         2 ~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (256)
T PRK06124          2 SILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFAR   81 (256)
T ss_pred             CcccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            344466789999999999999999999999999999999999877666554432     267889999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.++...
T Consensus        82 ~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~  159 (256)
T PRK06124         82 IDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAV  159 (256)
T ss_pred             HHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccH
Confidence            9999999999999999764 46788899999999999999999999999999997755 689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+++|++++.+++.++.|+.++||+++.|+||.++|++.....         .++........  ..+.+++.+|+|+++
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~a~  228 (256)
T PRK06124        160 YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA---------ADPAVGPWLAQ--RTPLGRWGRPEEIAG  228 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc---------cChHHHHHHHh--cCCCCCCCCHHHHHH
Confidence            9999999999999999999989999999999999999754322         11222222222  135688999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++|+++...+++|+.+.+|||+.
T Consensus       229 ~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        229 AAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             HHHHHcCcccCCcCCCEEEECCCcc
Confidence            9999999999999999999999976

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.3e-40  Score=282.83  Aligned_cols=239  Identities=33%  Similarity=0.471  Sum_probs=205.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++     ++.++.+|+++.++++++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999877665554332     356789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++|||||.... .++ +.+.++|++.+++|+.+++.++++++|.|.+.+ .+++|++||..+..+.++...|+++|+
T Consensus        88 ~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  164 (255)
T PRK06113         88 KVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_pred             CCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHHHHH
Confidence            99999999997633 344 688899999999999999999999999997644 579999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++++++++.++.+.||+||.|+||+++|++.....         .++.......   ..|.+++..|+|+++++++|+
T Consensus       165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~l~  232 (255)
T PRK06113        165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI---------TPEIEQKMLQ---HTPIRRLGQPQDIANAALFLC  232 (255)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc---------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999865421         2322222222   235688999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++...+++|++|.+|||.-
T Consensus       233 ~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CccccCccCCEEEECCCcc
Confidence            9989999999999999953

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-41  Score=292.06  Aligned_cols=238  Identities=24%  Similarity=0.259  Sum_probs=192.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----------HHHHHHHhhh-----CCeEEEecCCCHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD----------ELGAALASTI-----GGRYIHCDVTKEEDVE   77 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----------~~~~~~~~~~-----~~~~~~~D~~~~~~i~   77 (278)
                      .+|++|++|||||++|||+++|++|++.|++|++++|+.          +..+++.+.+     .+.++++|++++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            458899999999999999999999999999999999873          2333333222     2567899999999999


Q ss_pred             HHHHHHHhhcCCccEEEECC-ccCC---CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           78 SAVRLAVSWKGQLDIMFNNA-GISG---SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~na-g~~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ++++++.+.+|++|+||||| |...   ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~  162 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccc
Confidence            99999999999999999999 7421   125677888999999999999999999999999998754 589999999766


Q ss_pred             hc---CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCC
Q 023708          154 IM---GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL  230 (278)
Q Consensus       154 ~~---~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (278)
                      ..   +.++...|++||+|+.+|+++++.|++++||+||+|+||+++|++....+.    .   .+........   ..|
T Consensus       163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~----~---~~~~~~~~~~---~~p  232 (305)
T PRK08303        163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFG----V---TEENWRDALA---KEP  232 (305)
T ss_pred             cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhc----c---Cccchhhhhc---ccc
Confidence            43   334567899999999999999999999999999999999999998643221    0   1111111111   113


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCC-CCceeeEEe
Q 023708          231 -RGRSASIEDVAQAALFLASEEA-GFITAHNLV  261 (278)
Q Consensus       231 -~~~~~~~edva~~~~~l~s~~~-~~~tG~~i~  261 (278)
                       .++..+|||+|++++||+++.. .++||++|.
T Consensus       233 ~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        233 HFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             ccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence             4677899999999999999874 689999876

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-40  Score=281.80  Aligned_cols=249  Identities=34%  Similarity=0.501  Sum_probs=206.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS----TIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|.++..+...+    ..++.++.+|+++.++++++++++.+++++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4778999999999999999999999999999999998643221111    113567899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSKE  168 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~  168 (278)
                      +|+||||||.. ...++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+. .+.+++..|+++|+
T Consensus        83 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK~  160 (263)
T PRK08226         83 IDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTKA  160 (263)
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHHHHH
Confidence            99999999986 446778889999999999999999999999999987654 5799999998874 56677889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++++++++.++.++||+|++|+||.++|++........  .. ..+++.......  ..|++++.+|+|+|+.++||+
T Consensus       161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~--~~-~~~~~~~~~~~~--~~p~~~~~~~~~va~~~~~l~  235 (263)
T PRK08226        161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQS--NP-EDPESVLTEMAK--AIPLRRLADPLEVGELAAFLA  235 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhc--cC-CCcHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999876543111  00 112222222222  236788999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++.+.+++|+++.+|||.++.
T Consensus       236 ~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        236 SDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CchhcCCcCceEeECCCcccC
Confidence            998999999999999998754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-40  Score=283.24  Aligned_cols=244  Identities=25%  Similarity=0.382  Sum_probs=207.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|++|||||++|||++++++|+++|++|+++.+ +.+..+.+.+++     .+.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999998864 444444443332     3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||+|.... .++.+.+.++|++.+++|+.+++.+++++.+.|.++++.++||++||..+..+.++...|+++|++
T Consensus        81 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  159 (256)
T PRK12743         81 IDVLVNNAGAMTK-APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA  159 (256)
T ss_pred             CCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence            9999999998643 567788999999999999999999999999999775546899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.++++++.+++++||+++.|+||.++|++....          .+ +....  .....|.+|..+|+|+++++.||++
T Consensus       160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~----------~~-~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~  226 (256)
T PRK12743        160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD----------DS-DVKPD--SRPGIPLGRPGDTHEIASLVAWLCS  226 (256)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc----------Ch-HHHHH--HHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999875321          11 11111  1123366889999999999999999


Q ss_pred             CCCCCceeeEEeecCCcccCcCcc
Q 023708          250 EEAGFITAHNLVIDGGYTTGTSSM  273 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~~~~~  273 (278)
                      +...+++|+++.+|||..+..|-+
T Consensus       227 ~~~~~~~G~~~~~dgg~~~~~~~~  250 (256)
T PRK12743        227 EGASYTTGQSLIVDGGFMLANPQF  250 (256)
T ss_pred             ccccCcCCcEEEECCCccccCCcc
Confidence            999999999999999988776654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=282.40  Aligned_cols=242  Identities=30%  Similarity=0.375  Sum_probs=204.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|||||++|||+++++.|+++|++|++++|+.+..+++.+.+     ++.++++|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            589999999999999999999999999999999877666654432     356789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||+|.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+....++||++||..+..+.++...|++||++++
T Consensus        81 ~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         81 ALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            999999965 3357788999999999999999999999999999876544689999999999888888889999999999


Q ss_pred             HHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          172 GLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +|+++++.|+.+ +||+++.|+||+++|+......   .    .+++.......   ..+.+++.+|+|+++++.+|+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~---~----~~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~~  229 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL---W----ESEEAAKRTIQ---SVPLGRLGTPEEIAGLAYFLLSD  229 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccc---c----CCHHHHHHHhc---cCCCCCCCCHHHHHHHHHHHcCc
Confidence            999999999975 6999999999999864321110   0    01222222222   23568999999999999999998


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...+++|+++.+|||+.+-
T Consensus       230 ~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        230 EAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             cccccCCCEEEECCCeecC
Confidence            8899999999999998753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.3e-40  Score=282.13  Aligned_cols=249  Identities=29%  Similarity=0.375  Sum_probs=208.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.  ..  .....+.++++|+++.++++++++++.+.++++|
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLD   78 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678899999999999999999999999999999999876  11  1122467889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.+.|.+++ .+++|++||..+..+.++...|+++|++++
T Consensus        79 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  156 (252)
T PRK08220         79 VLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASKAALT  156 (252)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHHHHHHH
Confidence            9999999763 45778889999999999999999999999999998755 689999999999988888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.|++++||+++.+.||+++|++....+...................   ..|.+++.+|+|+|++++||+++.
T Consensus       157 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        157 SLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL---GIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             HHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh---cCCCcccCCHHHHHHHHHHHhcch
Confidence            99999999999999999999999999998654331110000000011111111   235688999999999999999998


Q ss_pred             CCCceeeEEeecCCcccC
Q 023708          252 AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~  269 (278)
                      ..+++|+++.+|||.++|
T Consensus       234 ~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        234 ASHITLQDIVVDGGATLG  251 (252)
T ss_pred             hcCccCcEEEECCCeecC
Confidence            999999999999999886

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-40  Score=281.67  Aligned_cols=251  Identities=29%  Similarity=0.345  Sum_probs=213.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999887666655443     257889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++|||||......++.+.+.++|++.+++|+.+++.+++++.+.|.+.  .++||++||..+..+.++...|+++|+
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sK~  159 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQPKYGAYKMAKG  159 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCCCCcchhHHHHH
Confidence            999999999976555677888999999999999999999999999999764  369999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.++++++.+++++||+++.++||.+.|++....+.........+.++.......  ..+.+++.+|+|+++++++++
T Consensus       160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~a~~~l~  237 (258)
T PRK07890        160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA--NSDLKRLPTDDEVASAVLFLA  237 (258)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh--cCCccccCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999987654432222222333333222221  235678999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...+++|+++.+|||..+
T Consensus       238 ~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        238 SDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             CHhhhCccCcEEEeCCcccc
Confidence            98888999999999999753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-40  Score=281.47  Aligned_cols=242  Identities=30%  Similarity=0.420  Sum_probs=202.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCC-
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQ-   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~-   89 (278)
                      .+++|++|||||++|||+++++.|+++|++|+++.+ ..+..+.+....  ++.++.+|+++.++++++++++.+.+++ 
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999998654 455555544433  3567899999999999999999998887 


Q ss_pred             ccEEEECCccCC-----CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           90 LDIMFNNAGISG-----SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        90 id~li~nag~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +|++|||||...     ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .+++|+++|.....+..+...|+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~  160 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDYT  160 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccchH
Confidence            999999998632     123577889999999999999999999999999997654 68999999988777777788999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++++++.++++++++||+||+|+||+++|+.....          .+++.......  ..|++++.+|+|+|+++
T Consensus       161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~va~~~  228 (253)
T PRK08642        161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA----------TPDEVFDLIAA--TTPLRKVTTPQEFADAV  228 (253)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc----------CCHHHHHHHHh--cCCcCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999854321          11222222221  23678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .||+++...+++|+.|.+|||+..
T Consensus       229 ~~l~~~~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        229 LFFASPWARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             HHHcCchhcCccCCEEEeCCCeec
Confidence            999999899999999999999754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-40  Score=281.07  Aligned_cols=249  Identities=30%  Similarity=0.397  Sum_probs=210.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +|++|||||+++||.+++++|+++|++|++++|+.+..+.+.+.+       .+.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999876665554331       3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++++++++.+.|.+++..+++|++||..+..+.+....|++||++
T Consensus        82 id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999763 3577889999999999999999999999999999875435799999999888888888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCC-CChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGV-PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++++++++.|++++||+|+.|+||.+ .+++..............++++.......  ..|.+|+.+|+|++++++||+
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYID--KVPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHH--hCcccCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999975 67766554433222223344444433322  236789999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...+++|+++++|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999864

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-41  Score=286.94  Aligned_cols=229  Identities=25%  Similarity=0.342  Sum_probs=188.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+..+++.+++     ++.++.+|++|.+++.++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999877665554432     3567899999999999999988 5679999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--------------  157 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------  157 (278)
                      +||||||+..        ..++|++.+++|+.+++++++.++|.|.+   .+++|+++|..+..+.              
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999742        12679999999999999999999999965   3678999998876542              


Q ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH
Q 023708          158 ----------------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK  221 (278)
Q Consensus       158 ----------------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                      +++..|++||+|++.+++.++.|++++||+||+|+||+++|++..+.+..      ...+....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~------~~~~~~~~  221 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG------PRGDGYRN  221 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC------CchHHHHH
Confidence                            24678999999999999999999999999999999999999986543210      01111222


Q ss_pred             HHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          222 MVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       222 ~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ...   ..|.+|+++|||+|++++||+++.++++||+.+.+|||.+.
T Consensus       222 ~~~---~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        222 MFA---KSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             Hhh---hCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            222   23679999999999999999999999999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-41  Score=284.05  Aligned_cols=191  Identities=32%  Similarity=0.389  Sum_probs=173.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ...+.||+|+|||||+|||.++|.+|+++|++++++.|...+++.+.+++       ++.+++||++|.++++++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999888777776663332       27788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      .+||++|+||||||+.. .....+.+.+++...|++|++|+.+++++++|.|++++ .|+||++||++++.+.|....|+
T Consensus        87 ~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccccc
Confidence            99999999999999986 66788889999999999999999999999999999876 79999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCC--cEEEEecCCCCCChhhHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHG--IRVNCISPHGVPSEMLVNAY  205 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~--i~v~~v~pG~v~t~~~~~~~  205 (278)
                      +||+|+.+|+++|+.|+.+.+  |++ .|.||+|+|++....+
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            999999999999999999876  666 9999999999877654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=278.00  Aligned_cols=233  Identities=17%  Similarity=0.147  Sum_probs=195.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +|++|||||++|||++++++|+++|++|++++|+++...+..+..++.++.+|++|.++++++++++.+.++++|++|||
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            58999999999999999999999999999999986544333333457789999999999999999999999999999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      ||.... ....+.+.++|++.+++|+.+++.+++.++|.|.+++ ..++||++||..+..+.+++..|++||+++++|++
T Consensus        82 ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~  160 (236)
T PRK06483         82 ASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL  160 (236)
T ss_pred             CccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH
Confidence            997533 3456778899999999999999999999999997643 14799999999998888889999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCc
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  255 (278)
                      +++.|+++ +||||+|+||++.++...            ++.......   ...|++|...|+|+|+++.||++  ..++
T Consensus       161 ~~a~e~~~-~irvn~v~Pg~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~~~~va~~~~~l~~--~~~~  222 (236)
T PRK06483        161 SFAAKLAP-EVKVNSIAPALILFNEGD------------DAAYRQKAL---AKSLLKIEPGEEEIIDLVDYLLT--SCYV  222 (236)
T ss_pred             HHHHHHCC-CcEEEEEccCceecCCCC------------CHHHHHHHh---ccCccccCCCHHHHHHHHHHHhc--CCCc
Confidence            99999987 599999999999764311            111111111   12356889999999999999996  5799


Q ss_pred             eeeEEeecCCccc
Q 023708          256 TAHNLVIDGGYTT  268 (278)
Q Consensus       256 tG~~i~~dgG~~~  268 (278)
                      ||+++.+|||+++
T Consensus       223 ~G~~i~vdgg~~~  235 (236)
T PRK06483        223 TGRSLPVDGGRHL  235 (236)
T ss_pred             CCcEEEeCccccc
Confidence            9999999999864

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.8e-40  Score=281.07  Aligned_cols=243  Identities=24%  Similarity=0.348  Sum_probs=210.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++       ++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999887766655432       256788999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.++...|++
T Consensus        85 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         85 HWDGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcchHH
Confidence            999999999999975 345677899999999999999999999999999998755 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|++++.++++++.|+.++||++++|.||+++|++......        .++.......   ..|.++..+|+|++.+++
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~va~~~~  231 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS--------DPDYYEQVIE---RTPMRRVGEPEEVAAAVA  231 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC--------ChHHHHHHHh---cCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999998654320        1222222222   236688999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++...+++|+.+.+|||+..
T Consensus       232 ~l~~~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        232 FLCMPAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             HHhCcccccccCCEEEECCCeEe
Confidence            99998888999999999999653

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=9.7e-40  Score=277.52  Aligned_cols=241  Identities=32%  Similarity=0.466  Sum_probs=205.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+...+..+..  .+.++.+|+++.++++++++++.+++|++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999998876666554443  36688999999999999999999999999


Q ss_pred             cEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           91 DIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        91 d~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      |+||||||.... ..++.+.+.++|++.+++|+.+++.+++++.|.|.+.  .++||++||..+..+.++...|+++|++
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~~~~~Y~~sKaa  163 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAASKGG  163 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence            999999998643 2567788999999999999999999999999999763  4799999999999998899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.+++.++.++.+ +|++++++||+++|++.....          ..........  ..|.+|..+|+|++.++.++++
T Consensus       164 ~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~  230 (255)
T PRK05717        164 LLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR----------AEPLSEADHA--QHPAGRVGTVEDVAAMVAWLLS  230 (255)
T ss_pred             HHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc----------chHHHHHHhh--cCCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999986 599999999999998643210          1111111111  2256899999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.+.+|||+++
T Consensus       231 ~~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        231 RQAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             chhcCccCcEEEECCCceE
Confidence            8888999999999999874

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=276.66  Aligned_cols=247  Identities=38%  Similarity=0.582  Sum_probs=210.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|++|+++||||++|||++++++|+++|++|++++|+....+...+..+..++.+|++++++++++++++.+.++++|++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999988777666665555788999999999999999999999999999


Q ss_pred             EECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-CCCchhhhhHHHHH
Q 023708           94 FNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-LASHAYSLSKEAII  171 (278)
Q Consensus        94 i~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~Y~~sK~a~~  171 (278)
                      |||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+++ .+++|++||..+..+. ++...|+++|++++
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~  162 (255)
T PRK06057         84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASKGGVL  162 (255)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHHHHHHH
Confidence            999997533 24567888999999999999999999999999998754 6899999998877665 46778999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ++++.++.++.+.||+++.|+||.++|++....+.       ..++...+...   ..|.+++.+|+|+++++.+|+++.
T Consensus       163 ~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        163 AMSRELGVQFARQGIRVNALCPGPVNTPLLQELFA-------KDPERAARRLV---HVPMGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             HHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc-------CCHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999899999999999999998765321       12233222222   235688999999999999999999


Q ss_pred             CCCceeeEEeecCCcc--cCcC
Q 023708          252 AGFITAHNLVIDGGYT--TGTS  271 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~--~~~~  271 (278)
                      ..+++|+++.+|||.+  +.+|
T Consensus       233 ~~~~~g~~~~~~~g~~~~~~~~  254 (255)
T PRK06057        233 ASFITASTFLVDGGISGAYVTP  254 (255)
T ss_pred             ccCccCcEEEECCCeeeeeccc
Confidence            9999999999999987  4444

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=282.27  Aligned_cols=242  Identities=31%  Similarity=0.414  Sum_probs=206.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+ ....+.+.+     ++.++.+|+++.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999999988742 233332222     2567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.+++++++.|.+   .+++|++||..++.+.+++..|+++
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~s  198 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNETLIDYSAT  198 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCCcchhHHH
Confidence            9999999999998655567888999999999999999999999999999854   4799999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.++++++.++.++||++++|+||.++|++.....         .++.......   ..+.+++.+|+|+|+++++
T Consensus       199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~  266 (290)
T PRK06701        199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF---------DEEKVSQFGS---NTPMQRPGQPEELAPAYVF  266 (290)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc---------CHHHHHHHHh---cCCcCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999754321         2222222222   2356889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...+++|++|.+|||.+.+
T Consensus       267 ll~~~~~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        267 LASPDSSYITGQMLHVNGGVIVN  289 (290)
T ss_pred             HcCcccCCccCcEEEeCCCcccC
Confidence            99998899999999999998654

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=273.17  Aligned_cols=232  Identities=31%  Similarity=0.466  Sum_probs=195.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+++|++|||||++|||+++++.|+++|++|+++.+ .++..+++.++.+..++.+|++|.+++.++++    .++++|+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~   78 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVR----KSGALDI   78 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHH----HhCCCcE
Confidence            467899999999999999999999999999988765 45556666566667788999999998887765    3578999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~a~~  171 (278)
                      +|||||... ..+..+.+.++|++.+++|+.+++.+++++++.|.+   .+++|++||..+. .+.++...|+++|++++
T Consensus        79 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~  154 (237)
T PRK12742         79 LVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMPVAGMAAYAASKSALQ  154 (237)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCCCCCCcchHHhHHHHH
Confidence            999999763 345677889999999999999999999999999864   5799999998874 57788889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ++++.++.++.++||+|+.|+||+++|++....          .+  ..+....  ..|.+|+.+|+|+++.+.||+++.
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~----------~~--~~~~~~~--~~~~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPIDTDANPAN----------GP--MKDMMHS--FMAIKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCcccCCccccc----------cH--HHHHHHh--cCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999975321          11  1111111  225688999999999999999999


Q ss_pred             CCCceeeEEeecCCcc
Q 023708          252 AGFITAHNLVIDGGYT  267 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~  267 (278)
                      ..++||+++.+|||+.
T Consensus       221 ~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        221 ASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cCcccCCEEEeCCCcC
Confidence            9999999999999974

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.9e-39  Score=274.12  Aligned_cols=240  Identities=25%  Similarity=0.388  Sum_probs=203.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |++|++|||||++|||++++++|+++|++|++. .+......+..+++     .+.++.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            568999999999999999999999999999885 34433333332221     245678999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.+.+ .+++|++||..+..+.++...|+++|+
T Consensus        81 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGITRD-VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999998643 4678899999999999999999999999999997754 689999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.++++++.++.+.||+++.|+||+++|++....          .++.......   ..|.+++.+|+|+++++.||+
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~l~  225 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI----------RPDVLEKIVA---TIPVRRLGSPDEIGSIVAWLA  225 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc----------ChHHHHHHHh---cCCccCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999986532          1222222222   225578899999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++...+++|+++.+|||+.+|
T Consensus       226 ~~~~~~~~g~~~~~~~g~~~~  246 (246)
T PRK12938        226 SEESGFSTGADFSLNGGLHMG  246 (246)
T ss_pred             CcccCCccCcEEEECCcccCc
Confidence            998999999999999998765

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.2e-39  Score=273.91  Aligned_cols=248  Identities=34%  Similarity=0.452  Sum_probs=209.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |+++||||+++||++++++|+++|++|++++|+.+...++.+.+     ++.++.+|++|++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999876665554332     2567899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+..+++|++||..+..+.+....|+++|++++.
T Consensus        81 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            99999986 44678899999999999999999999999999999886545899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++.++.++.+.||+++.|+||+++|+++.............+........  ....+.+++.+|+|++++++||+++..
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEF--SSEIALGRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHH--HhhCCCCCCCCHHHHHHHHHhhccccc
Confidence            999999999999999999999999999876543222111111212111111  122366889999999999999999999


Q ss_pred             CCceeeEEeecCCccc
Q 023708          253 GFITAHNLVIDGGYTT  268 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~  268 (278)
                      .+++|+++.+|||+.+
T Consensus       238 ~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       238 DYITGQSILVDGGMVY  253 (254)
T ss_pred             CCccCcEEEecCCccC
Confidence            9999999999999765

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=275.41  Aligned_cols=242  Identities=31%  Similarity=0.450  Sum_probs=208.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+..+++...+     ++.++.+|+++.++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999987776665432     36788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-------CcEEEEecCchhhcCCCCC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-------KGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~vsS~~~~~~~~~~  160 (278)
                      +++|++|||+|... ..++.+.+.++|+..+++|+.+++.+++++++.|.++..       .+++|++||..+..+.+..
T Consensus        85 ~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  163 (258)
T PRK06949         85 GTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI  163 (258)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence            99999999999863 356778888999999999999999999999999976432       4799999999998888888


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|+++|++++.+++.++.++.++||+++.|+||.++|++....+         . .+......  ...|.++.+.|+|+
T Consensus       164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~---------~-~~~~~~~~--~~~~~~~~~~p~~~  231 (258)
T PRK06949        164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW---------E-TEQGQKLV--SMLPRKRVGKPEDL  231 (258)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc---------C-hHHHHHHH--hcCCCCCCcCHHHH
Confidence            999999999999999999999999999999999999999865432         1 11111111  12356899999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++.+.||+++.+.+++|++|.+|||+.
T Consensus       232 ~~~~~~l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        232 DGLLLLLAADESQFINGAIISADDGFG  258 (258)
T ss_pred             HHHHHHHhChhhcCCCCcEEEeCCCCC
Confidence            999999999999999999999999973

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-39  Score=273.71  Aligned_cols=245  Identities=36%  Similarity=0.510  Sum_probs=212.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++++++|||||+++||+++++.|+++|++|++++|+.+...++...+.    +.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999999999999999999999999999999999877766655433    668899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||+|......++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.++...|+.+|++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            999999999865556778899999999999999999999999999998754 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.+++.++.++.++||+++.++||+++|++........      .++.......   ..+.+++.+|+|+|+++++|++
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~  231 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP------TPENRAKFLA---TIPLGRLGTPEDIANAALFLAS  231 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc------ChHHHHHHhc---CCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999988999999999999999866543110      1222222222   2256788999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.+.+|||.++
T Consensus       232 ~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        232 DEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             ccccCCCCCeEEECCCccC
Confidence            8888999999999999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-39  Score=273.62  Aligned_cols=244  Identities=31%  Similarity=0.380  Sum_probs=209.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.+..+++.+.+     ++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999877766655443     3567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++++.+.|.+....+++|++||..+..+.++...|+++
T Consensus        85 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  163 (263)
T PRK07814         85 FGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA  163 (263)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence            999999999999753 3567788999999999999999999999999999874446899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.++++++.++.+ +|+++.|+||.+.|++.....         +...........  .+..+..+|+|+|++++|
T Consensus       164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~  231 (263)
T PRK07814        164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA---------ANDELRAPMEKA--TPLRRLGDPEDIAAAAVY  231 (263)
T ss_pred             HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc---------CCHHHHHHHHhc--CCCCCCcCHHHHHHHHHH
Confidence            99999999999999987 699999999999999764211         111222222211  255778899999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++...+++|+.+.+|||...
T Consensus       232 l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        232 LASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             HcCccccCcCCCEEEECCCccC
Confidence            9998889999999999999887

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-39  Score=272.09  Aligned_cols=243  Identities=29%  Similarity=0.406  Sum_probs=206.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++||||+++||++++++|+++|++|++++|+++...+..++.+  +.++++|+++.+++.++++.+.+.++++|
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999999998777666655543  56789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .+++|+++|..+..+.+....|+++|++++
T Consensus        83 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         83 AVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMPNSSVYAASKAALL  158 (249)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCCCccHHHHHHHHHH
Confidence            9999999763 456778899999999999999999999999999854   468999999999888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++++++.|+.++||+++.++||.++|++......     ..............  ..|.+++.+|+|+|+++++|+++.
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        159 SLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGL-----PEATLDAVAAQIQA--LVPLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhcc-----CccchHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999998653210     00011111122221  225678899999999999999988


Q ss_pred             CCCceeeEEeecCCcc
Q 023708          252 AGFITAHNLVIDGGYT  267 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~  267 (278)
                      ..+++|+.|.+|||.+
T Consensus       232 ~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        232 SAFIVGSEIIVDGGMS  247 (249)
T ss_pred             ccCccCCeEEECCCcc
Confidence            8999999999999965

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-39  Score=274.80  Aligned_cols=246  Identities=28%  Similarity=0.367  Sum_probs=207.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+......+.+     +..++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999876655543322     24678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.++  .++||++||..+..+.+++..|+++|
T Consensus        85 ~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~~~~~~Y~asK  161 (264)
T PRK07576         85 GPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPMPMQAHVCAAK  161 (264)
T ss_pred             CCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCCCCccHHHHHH
Confidence            9999999999865 34577888999999999999999999999999998753  47999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      ++++.|+++++.++.++||+++.|+||+++ |+......         +.+........  ..|.++...|+|+|+.+++
T Consensus       162 ~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~  230 (264)
T PRK07576        162 AGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA---------PSPELQAAVAQ--SVPLKRNGTKQDIANAALF  230 (264)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc---------cCHHHHHHHHh--cCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999997 55433211         11122222211  2366889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccCcCc
Q 023708          247 LASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      |+++...+++|+++.+|||+.+++-.
T Consensus       231 l~~~~~~~~~G~~~~~~gg~~~~~~~  256 (264)
T PRK07576        231 LASDMASYITGVVLPVDGGWSLGGAS  256 (264)
T ss_pred             HcChhhcCccCCEEEECCCcccCchH
Confidence            99988889999999999999876543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.3e-39  Score=271.46  Aligned_cols=242  Identities=31%  Similarity=0.360  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEE-EecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVI-ADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~-~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |.++++|||||++|||+++++.|+++|++|++ ..|+.+..+++.+.+     ++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999876 477766655544432     256788999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||.. ...++.+.+.+++++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.++...|+++|+
T Consensus        82 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHHH
Confidence            999999999975 345788899999999999999999999999999998755 689999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.++++++.++.+.||+++.|+||++.|++.....         ...+.......  ..+.++..+|+|+|+++++++
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~~~  228 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP---------NREELLEDARA--KTPAGRMVEPEDVANAVLFLC  228 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc---------CchHHHHHHhc--CCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999864311         11112111111  124577899999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++...+++|+.+.+|||.++.
T Consensus       229 ~~~~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        229 SPEADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             CchhcCccCCEEEECCCeeee
Confidence            988889999999999998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-39  Score=271.71  Aligned_cols=246  Identities=29%  Similarity=0.391  Sum_probs=204.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+++.. ++.+.+     ++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            468899999999999999999999999999999999987655 332222     36788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||||.... ..+.+.. ++|++.+++|+.+++.+++.++|.|.+.  .+++|++||..+..+.+++..|++||
T Consensus        82 ~~id~vi~~ag~~~~-~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         82 GRIDGLVNNAGVNDG-VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             CCCCEEEECCcccCC-CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCCCCCchhHHHH
Confidence            999999999997533 3444444 9999999999999999999999988753  47999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edva~~~~~  246 (278)
                      ++++++++.++.|+.++||+++.|+||.++|++...+....     ..+.........  ..+. +++.+|+|+|+++++
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~  230 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATF-----DDPEAKLAAITA--KIPLGHRMTTAEEIADTAVF  230 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhc-----cCHHHHHHHHHh--cCCccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999876543211     012222111111  1233 478999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccCc
Q 023708          247 LASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      ++++...+++|+.+.+|||+++..
T Consensus       231 l~~~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        231 LLSERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             HhChhhccccCceEEecCCccccc
Confidence            999998999999999999987653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-39  Score=271.93  Aligned_cols=233  Identities=29%  Similarity=0.439  Sum_probs=195.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|+....  .  ..++.++.+|++++      ++++.+.++++|++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~--~~~~~~~~~D~~~~------~~~~~~~~~~id~l   71 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--L--SGNFHFLQLDLSDD------LEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--c--CCcEEEEECChHHH------HHHHHHhhCCCCEE
Confidence            57889999999999999999999999999999999875321  1  12356788999887      44455566899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||......++.+.+.++|++.+++|+.++++++++++|.+.+++ .+++|++||..+..+.++...|+++|++++.+
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  150 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHALAGF  150 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHHHHHHHH
Confidence            99999764445778889999999999999999999999999998755 68999999999999988999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.++.++||+++.|+||.++|++....+         .+.........  ..|.+++.+|+|+|++++||+++...
T Consensus       151 ~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~  219 (235)
T PRK06550        151 TKQLALDYAKDGIQVFGIAPGAVKTPMTAADF---------EPGGLADWVAR--ETPIKRWAEPEEVAELTLFLASGKAD  219 (235)
T ss_pred             HHHHHHHhhhcCeEEEEEeeCCccCccccccc---------CchHHHHHHhc--cCCcCCCCCHHHHHHHHHHHcChhhc
Confidence            99999999999999999999999999753211         11222222211  23678899999999999999999899


Q ss_pred             CceeeEEeecCCccc
Q 023708          254 FITAHNLVIDGGYTT  268 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~  268 (278)
                      +++|+++.+|||+++
T Consensus       220 ~~~g~~~~~~gg~~~  234 (235)
T PRK06550        220 YMQGTIVPIDGGWTL  234 (235)
T ss_pred             cCCCcEEEECCceec
Confidence            999999999999865

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-38  Score=269.96  Aligned_cols=251  Identities=30%  Similarity=0.407  Sum_probs=209.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||+++||++++++|+++|++|++++|+++...+..+.+     .+.++++|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999886666554433     256789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM-IEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.+++.+ .+.+ .++||++||..+..+.+....|+++|
T Consensus        84 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~sk  161 (262)
T PRK13394         84 SVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYVTAK  161 (262)
T ss_pred             CCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccHHHH
Confidence            9999999999863 3566778889999999999999999999999999 5433 68999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      ++++.+++.++.++++.+|+++.++||.+.|++....+...........++. ......  ..+.+++++|+|+++++++
T Consensus       162 ~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        162 HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG--KTVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc--CCCCCCCCCHHHHHHHHHH
Confidence            9999999999999998899999999999999987655433222222222222 222221  1245789999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++....+++|+.|.+|||+.+
T Consensus       240 l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        240 LSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HcCccccCCcCCEEeeCCceec
Confidence            9998778899999999999764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.5e-38  Score=267.75  Aligned_cols=245  Identities=31%  Similarity=0.504  Sum_probs=210.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      |++|++|||||+++||++++++|+++|++|++++|+.+...++.+.+     ++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999877666554432     3677899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|.+.+ .+++|++||..+..+.++...|+.+|++
T Consensus        81 ~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHHHH
Confidence            99999999975 445677888999999999999999999999999997754 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.++++++.++.+.+|+++.++||.++|++.......     ...+......+..  ..|.+++.+|+|+|+++.+|++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~  231 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGG-----AENPEKLREAFTR--AIPLGRLGQPDDLPGAILFFSS  231 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhc-----cCChHHHHHHHHh--cCCccCCcCHHHHHHHHHHHcC
Confidence            99999999999988899999999999999987654321     1123322222222  2256889999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++..+++|++|.+|||+++
T Consensus       232 ~~~~~~~g~~~~~~~g~~~  250 (250)
T TIGR03206       232 DDASFITGQVLSVSGGLTM  250 (250)
T ss_pred             cccCCCcCcEEEeCCCccC
Confidence            9999999999999999753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-39  Score=272.80  Aligned_cols=245  Identities=24%  Similarity=0.333  Sum_probs=192.5

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAALASTI-----GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~   80 (278)
                      |+...+++|++|||||++|||+++|+.|+++|++|+++.+.    .+..++..+.+     ++.++++|+++.+++++++
T Consensus         1 ~~~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          1 MADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            34456788999999999999999999999999997766432    23333332221     3567899999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      +++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .+++++++|.....+.+++
T Consensus        81 ~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~~~~~~  156 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGAFTPFY  156 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcccCCCc
Confidence            999999999999999999863 357788899999999999999999999999999864   3577776444333456778


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH--HHHhhcCCCCCCCCCCHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC--KMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~e  238 (278)
                      ..|++||++++.|+++++.|+.++||+|+.++||++.|++..+..         .++...  .......+....++.+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQE---------GAEAVAYHKTAAALSPFSKTGLTDIE  227 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccc---------ccchhhcccccccccccccCCCCCHH
Confidence            899999999999999999999999999999999999999753311         011000  000111111224789999


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|+++.||+++ ..+++|+++.+|||+.+
T Consensus       228 dva~~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        228 DIVPFIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             HHHHHHHHhhcc-cceeecceEeecCCccC
Confidence            999999999985 67899999999999764

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-39  Score=277.26  Aligned_cols=235  Identities=29%  Similarity=0.386  Sum_probs=201.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.++++    +..+.+|++|.++++++++++.+.+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            356889999999999999999999999999999999999887777665543    3456699999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|.++  .|+||++||..+..+.++...|++||
T Consensus        84 g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         84 GGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            99999999999864 5678899999999999999999999999999999763  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.|+++++.|++++||+++.++||+++|++......        ......... ...+.|.++..+|+|+|++++++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~--------~~~~~~~~~-~~~~~p~~~~~~~~~va~~i~~~  231 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA--------DLPAFRELR-ARLPWPLRRTTSVEKCAAAFVDG  231 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc--------cchhHHHHH-hhCCCcccCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999998754321        001111221 22223567899999999999999


Q ss_pred             ccCCCCCceee
Q 023708          248 ASEEAGFITAH  258 (278)
Q Consensus       248 ~s~~~~~~tG~  258 (278)
                      +++...+++|.
T Consensus       232 ~~~~~~~i~~~  242 (296)
T PRK05872        232 IERRARRVYAP  242 (296)
T ss_pred             HhcCCCEEEch
Confidence            99888887765

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.3e-39  Score=297.93  Aligned_cols=246  Identities=32%  Similarity=0.495  Sum_probs=210.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++|++|||||++|||+++++.|+++|++|++++|+.+..+++.++++  +.++.+|++++++++++++++.+.+|++|
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            3578999999999999999999999999999999999888777766553  56789999999999999999999999999


Q ss_pred             EEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           92 IMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        92 ~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      +||||||+... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|+++|+++
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal  161 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV  161 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence            99999997432 34677899999999999999999999999999998755335999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|+.+++|+|+.|+||.++|++......    .....+.   ....   ..|.+++.+|+|+|+.+.||+++
T Consensus       162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~----~~~~~~~---~~~~---~~~~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELER----AGKLDPS---AVRS---RIPLGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcc----cchhhhH---HHHh---cCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999998754321    0000011   1111   22557889999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...+++|+.+.+|||+...
T Consensus       232 ~~~~~~G~~~~~~gg~~~~  250 (520)
T PRK06484        232 QASYITGSTLVVDGGWTVY  250 (520)
T ss_pred             cccCccCceEEecCCeecc
Confidence            9999999999999998744

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=267.01  Aligned_cols=250  Identities=34%  Similarity=0.472  Sum_probs=212.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++|++|||||+++||++++++|+++|++|++++|+.+.......++     ++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56799999999999999999999999999999999887766654433     3567899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||... ..++.+.+.++++..+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.++...|+++|++
T Consensus        82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            999999999763 35677889999999999999999999999999998755 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH-HHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC-KMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++.+++.++.++.+.+|+++.++||.+.|++..............+..... .....  ..+.+++.+++|+|+++++|+
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~~~~~l~  237 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP--LVPQKRFTTVEEIADYALFLA  237 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc--cCCccccCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999876554333222223333222 12211  124578999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++....++|+++.+|||++.
T Consensus       238 ~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        238 SFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             CccccCccCCeEEeCCCEec
Confidence            88778899999999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=265.54  Aligned_cols=214  Identities=21%  Similarity=0.238  Sum_probs=182.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +++||||++|||+++++.|+++|++|++++|+.+..+++.+..++.++.+|++++++++++++++.+   ++|++|||||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCC
Confidence            4899999999999999999999999999999988877776666677899999999999999887653   6999999998


Q ss_pred             cCCC-----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           99 ISGS-----GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        99 ~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      ....     ..++.+ +.++|++.+++|+.++++++++++|.|.+   .|+||++||..    .+....|++||+|+.+|
T Consensus        79 ~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~----~~~~~~Y~asKaal~~~  150 (223)
T PRK05884         79 PSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN----PPAGSAEAAIKAALSNW  150 (223)
T ss_pred             ccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC----CCCccccHHHHHHHHHH
Confidence            5311     112333 47899999999999999999999999964   48999999976    34567899999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      ++.++.|++++||+||+|+||+++|++....                   ..   .|   ..+|+|+++.+.||+++.+.
T Consensus       151 ~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-------------------~~---~p---~~~~~~ia~~~~~l~s~~~~  205 (223)
T PRK05884        151 TAGQAAVFGTRGITINAVACGRSVQPGYDGL-------------------SR---TP---PPVAAEIARLALFLTTPAAR  205 (223)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccCchhhhhc-------------------cC---CC---CCCHHHHHHHHHHHcCchhh
Confidence            9999999999999999999999999864210                   00   12   13899999999999999999


Q ss_pred             CceeeEEeecCCccc
Q 023708          254 FITAHNLVIDGGYTT  268 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~  268 (278)
                      ++||+++.+|||+..
T Consensus       206 ~v~G~~i~vdgg~~~  220 (223)
T PRK05884        206 HITGQTLHVSHGALA  220 (223)
T ss_pred             ccCCcEEEeCCCeec
Confidence            999999999999864

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.8e-38  Score=266.97  Aligned_cols=232  Identities=28%  Similarity=0.448  Sum_probs=196.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +|||||++|||++++++|+++|++|++++|. ++..+...+.+     ++.++.+|++|.+++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999988764 34444433322     36788999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||+|.... .++.+.+.++|+..+++|+.+++++++++++.+.+..+.+++|++||..+..+.++...|+++|++++.+
T Consensus        81 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        81 VLNAGITRD-AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EECCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            999998633 4677889999999999999999999998865443323368999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.|+.++||+++.|+||+++|++..+..           +.......   ..|++|..+|+|+++.++||+++...
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~~~~~  225 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE-----------HDLDEALK---TVPMNRMGQPAEVASLAGFLMSDGAS  225 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhh-----------HHHHHHHh---cCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999875421           11222222   23678999999999999999999999


Q ss_pred             CceeeEEeecCCc
Q 023708          254 FITAHNLVIDGGY  266 (278)
Q Consensus       254 ~~tG~~i~~dgG~  266 (278)
                      +++|+.+.+|||+
T Consensus       226 ~~~g~~~~~~gg~  238 (239)
T TIGR01831       226 YVTRQVISVNGGM  238 (239)
T ss_pred             CccCCEEEecCCc
Confidence            9999999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-38  Score=266.41  Aligned_cols=247  Identities=38%  Similarity=0.554  Sum_probs=211.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+...+..+.+    ++.++++|++|.++++++++++.++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999999877666655443    357889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|++.+ .++++++||..+..+.++...|+.+|+
T Consensus        81 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         81 RLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHHH
Confidence            9999999999763 35677888999999999999999999999999998754 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++...|+++++++||.+.|++..+....     ...+..........  .+.+++.+|+|+++++++++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~  231 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFAR-----HADPEALREALRAR--HPMNRFGTAEEVAQAALFLA  231 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhcc-----ccChHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999998999999999999999987654321     11233332222221  24467889999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...+++|+.+.+|||++.
T Consensus       232 ~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        232 SDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             CchhcCccCCEEEECCCeec
Confidence            99889999999999999763

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=266.68  Aligned_cols=241  Identities=34%  Similarity=0.466  Sum_probs=207.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+++||||+++||+++++.|+++|++|++++|+++......+.+     ++.++.+|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999877666554433     367789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++ .+++|++||..+..+.+....|+++|+
T Consensus        84 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~sK~  161 (250)
T PRK12939         84 GLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVASKG  161 (250)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCCcchHHHHHH
Confidence            99999999998644 5677889999999999999999999999999998755 689999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++.+.+|+++.|+||+++|++.....         ..........   ..+.+++.+|+|+|+++++++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        162 AVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVP---------ADERHAYYLK---GRALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             HHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccC---------ChHHHHHHHh---cCCCCCCCCHHHHHHHHHHHh
Confidence            9999999999999989999999999999999864321         0011111111   125578899999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++..++++|+.|.+|||+.+
T Consensus       230 ~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        230 SDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             CccccCccCcEEEECCCccc
Confidence            98888999999999999865

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=3.7e-38  Score=265.80  Aligned_cols=240  Identities=27%  Similarity=0.425  Sum_probs=206.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|++|||||+++||++++++|+++|+.|++.+|+.+..+++.+..  ++.++.+|+++.++++++++++.+.++++|
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            567899999999999999999999999999999888877776665443  356789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||||... ..++.+.+.++|++.+++|+.+++++++++.+.+.+++ .+++|++||..+..+.++...|+++|+++.
T Consensus        83 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~  160 (245)
T PRK12936         83 ILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMI  160 (245)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHHHHHH
Confidence            9999999863 35677888899999999999999999999999887644 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ++++.++.++.+.|+++++++||+++|++....          .+.......   ...|.+|+.+|+|+++++.+|+++.
T Consensus       161 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        161 GFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL----------NDKQKEAIM---GAIPMKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHHHHHHhhHhCeEEEEEEECcCcCchhccc----------ChHHHHHHh---cCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999998999999999999999875431          111111111   1235688999999999999999988


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++|+++.+|||+.+
T Consensus       228 ~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        228 AAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             ccCcCCCEEEECCCccc
Confidence            88999999999999764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3e-38  Score=268.20  Aligned_cols=235  Identities=25%  Similarity=0.337  Sum_probs=196.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+..+++.+.+       .+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999887766554433       13466899999999999999999999


Q ss_pred             CCccEEEECCccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-------
Q 023708           88 GQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-------  158 (278)
Q Consensus        88 g~id~li~nag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-------  158 (278)
                      +++|+||||||....  ..++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..+..       
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcccc
Confidence            999999999985422  34678899999999999999999999999999998765 67999999987754321       


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC
Q 023708          159 ---ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA  235 (278)
Q Consensus       159 ---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
                         ....|++||++++++++.++.|+.++||+++.++||.+.++......               ......  .+..++.
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~---------------~~~~~~--~~~~~~~  223 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL---------------NAYKKC--CNGKGML  223 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHH---------------HHHHhc--CCccCCC
Confidence               22369999999999999999999999999999999998776422211               011111  1346789


Q ss_pred             CHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          236 SIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +|+|+|+++++++++...+++|+.+.+|||++
T Consensus       224 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        224 DPDDICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             CHHHhhhhHhheeccccccccCceEEecCCcc
Confidence            99999999999999888999999999999975

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-38  Score=267.11  Aligned_cols=241  Identities=33%  Similarity=0.470  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.+..+...+.+     ++.++.+|++|.++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999877665554432     35678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHccCCCcEEEEecCchhhcCCCC----Cch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA-MIEGQRKGSIICTSSSAAIMGGLA----SHA  162 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~~~~iv~vsS~~~~~~~~~----~~~  162 (278)
                      +++|++|||||.. ...+..+.+.++|++.+++|+.+++.+++++.+. |.+++ .+++|++||..+..+.+.    ...
T Consensus        88 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcch
Confidence            9999999999975 3356778889999999999999999999999998 65543 689999999887765543    478


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+++|++++.++++++.++.++||+++.|+||.++|++.....          +.........   .|.+++++|+|+++
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~va~  232 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL----------ERLGEDLLAH---TPLGRLGDDEDLKG  232 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh----------HHHHHHHHhc---CCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999998765432          1112222222   25578899999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+.+|+++...+++|+.+.+|||.++
T Consensus       233 ~~~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        233 AALLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HHHHHhCccccCccCCEEEECCCeec
Confidence            99999999999999999999999864

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-38  Score=268.35  Aligned_cols=236  Identities=26%  Similarity=0.342  Sum_probs=200.2

Q ss_pred             CCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecc-----------hHHHHHHHhh-----hCCeEEEecCCCHHH
Q 023708           14 RLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADIL-----------DELGAALAST-----IGGRYIHCDVTKEED   75 (278)
Q Consensus        14 ~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~-----------~~~~~~~~~~-----~~~~~~~~D~~~~~~   75 (278)
                      ++++|++|||||++  |||.+++++|+++|++|++++|+           ......+...     .++.++.+|+++.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            56789999999994  99999999999999999999886           2211112221     136788999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      +.++++++.+.++++|+||||||+. ...++.+.+.+++++.+++|+.+++.+++++++.|.++. .+++|++||..+..
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccC
Confidence            9999999999999999999999986 345778889999999999999999999999999997644 68999999999988


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA  235 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
                      +.++...|+++|+++++++++++.++...||+++.++||+++|++......             .....   ..+.++..
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------------~~~~~---~~~~~~~~  223 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------------HHLVP---KFPQGRVG  223 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------------Hhhhc---cCCCCCCc
Confidence            888889999999999999999999999899999999999999986432110             11111   12446788


Q ss_pred             CHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          236 SIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +|+|+|+.+.+|+++...+++|+++.+|||++
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        224 EPVDAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEecCCcc
Confidence            99999999999999988899999999999986

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=265.47  Aligned_cols=217  Identities=15%  Similarity=0.126  Sum_probs=185.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++     ++..+.+|+++.++++++++++.+++|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999988777665433     255788999999999999999999999


Q ss_pred             -CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 -QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                       ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|.++++.|+||++||..+   .+++..|+++|
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~asK  158 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVESSN  158 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHHHH
Confidence             99999999986555567889999999999999999999999999999987544689999999764   35677899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++.+|+++++.|++++||+||+|+||+++|+...            .+++....              .||++.++.||
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~------------~~~~~~~~--------------~~~~~~~~~~l  212 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL------------DAVHWAEI--------------QDELIRNTEYI  212 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc------------CHHHHHHH--------------HHHHHhheeEE
Confidence            99999999999999999999999999999998321            11111110              17999999999


Q ss_pred             ccCCCCCceeeEEe
Q 023708          248 ASEEAGFITAHNLV  261 (278)
Q Consensus       248 ~s~~~~~~tG~~i~  261 (278)
                      ++  +.|+||+.+.
T Consensus       213 ~~--~~~~tg~~~~  224 (227)
T PRK08862        213 VA--NEYFSGRVVE  224 (227)
T ss_pred             Ee--cccccceEEe
Confidence            96  6799998875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=3.7e-38  Score=268.02  Aligned_cols=235  Identities=21%  Similarity=0.212  Sum_probs=192.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHH----cCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAE----NGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~----~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++|||||++|||+++|++|++    .|++|++++|+++..+++.+++       .+.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999987777665433       25678899999999999999998877


Q ss_pred             CCc----cEEEECCccCCCCC-CcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcCCCCC
Q 023708           88 GQL----DIMFNNAGISGSGG-SITSL-NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        88 g~i----d~li~nag~~~~~~-~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~  160 (278)
                      |++    |+||||||...... ...+. +.++|++.+++|+.+++.+++.++|.|.+++ ..++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            653    69999999754322 23333 5789999999999999999999999998642 25799999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|++||+++++|+++++.|++++||+|+.|+||+++|++........     ..++........   .|.+|+.+|+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~p~ev  233 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES-----VDPDMRKGLQEL---KAKGKLVDPKVS  233 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc-----CChhHHHHHHHH---HhcCCCCCHHHH
Confidence            999999999999999999999999999999999999999876543211     112222222221   256889999999


Q ss_pred             HHHHHHhccCCCCCceeeEEee
Q 023708          241 AQAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~  262 (278)
                      |+.+++|++ ..+++||+++.+
T Consensus       234 a~~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       234 AQKLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHHHh-cCCcCCcceeec
Confidence            999999996 567999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-38  Score=275.07  Aligned_cols=238  Identities=29%  Similarity=0.407  Sum_probs=197.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++|++|+++|++|+++++.. +..+++.+++     ++.++.+|++|.++++++++.+.+
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988743 3333333322     256789999999999999999998


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC------CCcEEEEecCchhhcCCCC
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ------RKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~  159 (278)
                       +|++|+||||||+... .++.+.+.++|++.+++|+.+++++++++.++|.++.      ..|+||++||..+..+.++
T Consensus        87 -~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (306)
T PRK07792         87 -LGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG  164 (306)
T ss_pred             -hCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC
Confidence             9999999999998643 4678889999999999999999999999999997531      1379999999999988888


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|+++|++++.|++.++.|+.++||+||+|+||. .|++....+..       .++..   ...      ....+|+|
T Consensus       165 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~-------~~~~~---~~~------~~~~~pe~  227 (306)
T PRK07792        165 QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGD-------APDVE---AGG------IDPLSPEH  227 (306)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccc-------cchhh---hhc------cCCCCHHH
Confidence            999999999999999999999999999999999994 88876443211       01100   000      12348999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++..+.||+++...++||+++.+|||...
T Consensus       228 va~~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        228 VVPLVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             HHHHHHHHcCccccCCCCCEEEEcCCeEE
Confidence            99999999999888999999999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-38  Score=265.92  Aligned_cols=237  Identities=29%  Similarity=0.439  Sum_probs=201.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|+++||||++|||+++++.|+++|++|+++.|+. +...++.+.+     ++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999998877643 3333333222     35788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+   .+++|++||..+..+.++...|+++|
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCCCCchhHHHH
Confidence            99999999999863 357788899999999999999999999999999854   47999999999998999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.+.|++++.++||+++|++....         ..++........   .|.++..+|+|+++.+.|+
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~d~a~~~~~l  225 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG---------KSAEQIDQLAGL---APLERLGTPEEIAAAVAFL  225 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc---------CCHHHHHHHHhc---CCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999985321         122223333222   2568899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCc
Q 023708          248 ASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~  266 (278)
                      +++...+++|+.|.+|||+
T Consensus       226 ~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        226 AGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             cCccccCccccEEEeCCCC
Confidence            9988889999999999986

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-38  Score=268.23  Aligned_cols=242  Identities=32%  Similarity=0.429  Sum_probs=207.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +|++|++|||||+++||++++++|+++|++|++++|+.+......+.+       ++.++.+|++|++++.++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999876655544332       3567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|++|||||......++.+.+.++|.+.+++|+.+++.+++++++.|.+.+ .+++|++||..+..+.+....|+++
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCCCCcchHHH
Confidence            999999999999765556778889999999999999999999999999998755 6899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      |++++.+++.++.++...+|+++.|+||.++|++.....         ..... .....   ..|.+++++|+|++++++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~dva~~~~  230 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPIT---------ESPELSADYRA---CTPLPRVGEVEDVANLAM  230 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccc---------cCHHHHHHHHc---CCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999764321         11111 11111   225678999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|++....+++|+.+++|||+.+
T Consensus       231 ~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        231 FLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             HHcCchhcCcCCCEEEECCCeec
Confidence            99998888999999999999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=263.45  Aligned_cols=238  Identities=32%  Similarity=0.420  Sum_probs=198.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|||||+++||.+++++|+++|++|+++.+ +++...++.+.+     ++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999988764 444444333322     25678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCC-CchhhhhH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLA-SHAYSLSK  167 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~-~~~Y~~sK  167 (278)
                      |+||||||......++.+.+.++|++.+++|+.+++.+++++++.|.++.  +.+++|++||..+..+.++ +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            99999999875555677889999999999999999999999999997532  2478999999998888776 36799999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++++++.++.++.++||+++.|+||.+.|++....         ..+........   ..|.++..+|+|++++++++
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~---------~~~~~~~~~~~---~~p~~~~~~~~d~a~~~~~l  229 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG---------GEPGRVDRVKA---GIPMGRGGTAEEVARAILWL  229 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc---------CCHHHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999975321         02222222221   23668889999999999999


Q ss_pred             ccCCCCCceeeEEeecCCc
Q 023708          248 ASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~  266 (278)
                      +++...+++|+.+++|||.
T Consensus       230 ~~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        230 LSDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             hCccccCccCCEEeecCCC
Confidence            9988889999999999973

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=262.27  Aligned_cols=240  Identities=34%  Similarity=0.491  Sum_probs=205.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++++++++||||+++||+++++.|+++|++|++++|+.+..+++.+..+..++.+|+++.+++.++++.    ++++|+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~~~~d~   80 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA----AGAFDG   80 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH----hCCCCE
Confidence            4678999999999999999999999999999999999988777777666778889999999988887765    468999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      +|||||... ..+..+.+.++|++.+++|+.+++.+++++++.+.+++..+++|++||..+..+.++...|+++|++++.
T Consensus        81 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  159 (245)
T PRK07060         81 LVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDA  159 (245)
T ss_pred             EEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHH
Confidence            999999863 3566678889999999999999999999999999764434799999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++.++.++.+.||+++.++||.+.|++....+.        .+........   ..|.+++.+|+|+++++++++++..
T Consensus       160 ~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        160 ITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS--------DPQKSGPMLA---AIPLGRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             HHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc--------CHHHHHHHHh---cCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999998889999999999999998654321        1111111222   2356889999999999999999888


Q ss_pred             CCceeeEEeecCCccc
Q 023708          253 GFITAHNLVIDGGYTT  268 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~  268 (278)
                      .+++|+.+.+|||+.+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        229 SMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CCccCcEEeECCCccC
Confidence            8999999999999853

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-38  Score=268.79  Aligned_cols=231  Identities=28%  Similarity=0.277  Sum_probs=195.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-------HHHHHhhh-----CCeEEEecCCCHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-------GAALASTI-----GGRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-------~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~   81 (278)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.       +.+..+++     ++.++.+|+++.+++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999987532       22222221     35678899999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--CC
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--LA  159 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~  159 (278)
                      ++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.  ++
T Consensus        83 ~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~  160 (273)
T PRK08278         83 KAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFAP  160 (273)
T ss_pred             HHHHHhCCCCEEEECCCCc-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccccccCC
Confidence            9999999999999999975 345778899999999999999999999999999998765 6899999998877776  78


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCC-CCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH-GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (278)
                      +..|++||+++++++++++.|+.++||+|++|+|| .++|++.....          ..          ..+.++..+|+
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~----------~~----------~~~~~~~~~p~  220 (273)
T PRK08278        161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL----------GG----------DEAMRRSRTPE  220 (273)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc----------cc----------cccccccCCHH
Confidence            88999999999999999999999999999999999 57888654321          00          00235678999


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++|+.+++++++...++||+.+ +|++..
T Consensus       221 ~va~~~~~l~~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        221 IMADAAYEILSRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             HHHHHHHHHhcCccccceeEEE-eccchh
Confidence            9999999999998899999987 677765

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-37  Score=263.88  Aligned_cols=239  Identities=33%  Similarity=0.474  Sum_probs=201.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTIG-------GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++||||++|||+++++.|+++|++|++++|+ .+..+++.+.+.       +.++.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999997 555555544321       23578999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||||... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|++++
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            9999999863 35678889999999999999999999999999998754 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCC--cEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELGKHG--IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      .++++++.|+.+++  |+++.|+||+++|++........     ..+........   ..|.+++.+|+|+++++++|++
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~  231 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL-----GEEEATRKLAR---GVPLGRLGEPDDVAHAVLYLAS  231 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc-----cchhHHHHHhc---cCCCCCCcCHHHHHHHHHHHcC
Confidence            99999999997665  99999999999999876543211     01111122222   2356788999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.+.+|||.+.
T Consensus       232 ~~~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        232 DESRFVTGAELVIDGGICA  250 (251)
T ss_pred             ccccCccCCEEEECCCeec
Confidence            9899999999999999763

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-38  Score=263.08  Aligned_cols=191  Identities=28%  Similarity=0.428  Sum_probs=175.4

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ...+.+|++||||||++|||+++|.+|+++|+++++.+.+++...+..+..+    ++.+.||+++.+++.++.++++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999999888766666555444    788999999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      .|+||+||||||+. ...++.+.+.+++++.|++|+.|+|..+++|+|.|.+.+ .|+||.|+|+++..+.++...|++|
T Consensus       112 ~G~V~ILVNNAGI~-~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  112 VGDVDILVNNAGIV-TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             cCCceEEEeccccc-cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhhh
Confidence            99999999999997 556888899999999999999999999999999999866 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC---CCCcEEEEecCCCCCChhhHH
Q 023708          167 KEAIIGLARSTACELG---KHGIRVNCISPHGVPSEMLVN  203 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~---~~~i~v~~v~pG~v~t~~~~~  203 (278)
                      |+|+.+|.++|..|+.   ..||+...|+|+.++|.|+..
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            9999999999999985   447999999999999999864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=8.5e-38  Score=267.39  Aligned_cols=236  Identities=25%  Similarity=0.272  Sum_probs=187.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh------CCeEEEecCCCHHHH----HHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI------GGRYIHCDVTKEEDV----ESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~------~~~~~~~D~~~~~~i----~~~~~~~~~~   86 (278)
                      ++++||||++|||++++++|+++|++|++++| +++..+.+.+++      ...++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999998765 345555444333      245688999999865    5566666677


Q ss_pred             cCCccEEEECCccCCCCCCcccCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNM-----------EDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSS  150 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS  150 (278)
                      +|++|+||||||.... .++.+.+.           ++|.+.+++|+.+++.++++++|.|...     +..+++|+++|
T Consensus        82 ~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            8999999999997533 33433333           3589999999999999999999998643     12468999999


Q ss_pred             chhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCC
Q 023708          151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL  230 (278)
Q Consensus       151 ~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (278)
                      ..+..+.+++.+|++||+++++|+++++.|++++||+|+.|+||+++|+...            +++........   .|
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~------------~~~~~~~~~~~---~~  225 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM------------PFEVQEDYRRK---VP  225 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc------------chhHHHHHHHh---CC
Confidence            9998888999999999999999999999999999999999999998765221            11111111111   13


Q ss_pred             C-CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          231 R-GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       231 ~-~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      . ++..+|+|+++.++||+++...+++|+.+.+|||+++.
T Consensus       226 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       226 LGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             CCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            3 37889999999999999999999999999999998763

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-37  Score=262.33  Aligned_cols=237  Identities=30%  Similarity=0.407  Sum_probs=197.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .|++|||||++|||.++++.|+++|++|+++. |+.+..+.+.+.+     ++.++.||+++.++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999998764 5555444443322     36788999999999999999999989999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCC-CchhhhhH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLA-SHAYSLSK  167 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~-~~~Y~~sK  167 (278)
                      |+||||||......++.+.+.++++..+++|+.+++.+++++++.+..++  +.+++|++||..+..+.+. +..|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            99999999875555678889999999999999999999999999986532  2478999999998877664 56899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++++++++.++.+.||+++.|+||+++|++....         ..++...... .  ..|.++..+|||+++.++++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~---------~~~~~~~~~~-~--~~~~~~~~~~e~va~~~~~l  229 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG---------GQPGRAARLG-A--QTPLGRAGEADEVAETIVWL  229 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc---------CCHHHHHHHh-h--cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999975320         0122221111 1  22567889999999999999


Q ss_pred             ccCCCCCceeeEEeecCC
Q 023708          248 ASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG  265 (278)
                      +++...+++|++|.+|||
T Consensus       230 ~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        230 LSDAASYVTGALLDVGGG  247 (248)
T ss_pred             cCccccCcCCceEeeCCC
Confidence            998889999999999998

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4e-37  Score=259.49  Aligned_cols=237  Identities=30%  Similarity=0.450  Sum_probs=201.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .|++|||||+++||+++|+.|+++|++|++++|+.. ..++.....     ++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999998743 222222221     26788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |++|||+|... ..++.+.+.++|++.+++|+.+++++++.+++.+.+.+ .+++|++||..+..+.++...|+++|+++
T Consensus        82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK~a~  159 (245)
T PRK12824         82 DILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGM  159 (245)
T ss_pred             CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHHHHH
Confidence            99999999863 35677889999999999999999999999999998755 68999999999998989999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +++++.++.++.+.||+++.+.||.+.|++....          .+........   ..|.++..+|+|+++++.+|+++
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~~~  226 (245)
T PRK12824        160 IGFTKALASEGARYGITVNCIAPGYIATPMVEQM----------GPEVLQSIVN---QIPMKRLGTPEEIAAAVAFLVSE  226 (245)
T ss_pred             HHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc----------CHHHHHHHHh---cCCCCCCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999875432          1211111111   22567888999999999999988


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ...+++|+.+.+|||+.+
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        227 AAGFITGETISINGGLYM  244 (245)
T ss_pred             cccCccCcEEEECCCeec
Confidence            889999999999999854

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=7.6e-37  Score=258.35  Aligned_cols=237  Identities=33%  Similarity=0.518  Sum_probs=199.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|+++||||++|||.+++++|+++|++|+++.+ .++..+++.+.+     ++.++.+|+++++++.++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999987654 444444443322     367789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+++..|+++|+
T Consensus        84 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK12935         84 KVDILVNNAGITRD-RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAKA  161 (247)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            99999999998633 5677888999999999999999999999999998755 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++++++++.++.+.||+++.++||.++|++....          +..........   .+.+++.+|||+++++++++
T Consensus       162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~----------~~~~~~~~~~~---~~~~~~~~~edva~~~~~~~  228 (247)
T PRK12935        162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV----------PEEVRQKIVAK---IPKKRFGQADEIAKGVVYLC  228 (247)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc----------cHHHHHHHHHh---CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999998999999999999999875432          11111222221   23467899999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++ ..+++|+++++|||..
T Consensus       229 ~~-~~~~~g~~~~i~~g~~  246 (247)
T PRK12935        229 RD-GAYITGQQLNINGGLY  246 (247)
T ss_pred             Cc-ccCccCCEEEeCCCcc
Confidence            75 4589999999999964

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-37  Score=258.72  Aligned_cols=238  Identities=35%  Similarity=0.482  Sum_probs=200.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+++....+.+.+     +..++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999876655554433     356789999999999999999999999


Q ss_pred             CccEEEECCccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           89 QLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++|+||||||+...  ..++.+.+.+++++.+++|+.+++.+++++++.|.+.+ .+++|++||..++.   +...|++|
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC---CccccHHH
Confidence            99999999998642  34567888999999999999999999999999998754 68999999988754   34689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      |++++.+++++++++...||+++.++||.++|++....          .+... ......   .+..++.+|+|+++.++
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~d~a~~~~  225 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV----------TPKEFVADMVKG---IPLSRMGTPEDLVGMCL  225 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc----------CCHHHHHHHHhc---CCCCCCcCHHHHHHHHH
Confidence            99999999999999998999999999999999975432          22222 222222   24466889999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++.....+|+.+++|||.++
T Consensus       226 ~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        226 FLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHhChhhhCcCCCEEEECCCeec
Confidence            99987767789999999999875

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-37  Score=261.29  Aligned_cols=222  Identities=20%  Similarity=0.214  Sum_probs=187.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |+++||||++|||+++|++|+ +|++|++++|+++..+++.+++      .+.++.+|++|.++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999988777665543      156789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||||.... .+..+.+.+++++.+++|+.+++.+++.++|.|.+++..|+||++||..+..+.+++..|++||+|++
T Consensus        80 ~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            99999998643 34556777888999999999999999999999987543589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+++++.|+.++||+|++|+||+++|++....          .+              .....+|||+|+.++++++..
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~----------~~--------------~~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM----------KP--------------APMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCC----------CC--------------CCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999975321          00              011358999999999999765


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..   +..+.++|+..+
T Consensus       215 ~~---~~~~~~~~~~~~  228 (246)
T PRK05599        215 KR---STTLWIPGRLRV  228 (246)
T ss_pred             CC---CceEEeCccHHH
Confidence            32   456777777643

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.2e-36  Score=256.05  Aligned_cols=236  Identities=30%  Similarity=0.444  Sum_probs=201.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |++|||||++|||++++++|+++|++|+++.| +++...+...+     .++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999887 55444433322     1356889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.++...|+++|++++
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            9999999763 35677889999999999999999999999999998754 689999999999888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.++.+.||+++.+.||+++|++....          .+........   ..|.+++..|+|+++.+.+|++++
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAM----------REDVLNSIVA---QIPVGRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc----------chHHHHHHHh---cCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999998999999999999999876432          1222222222   235688999999999999999988


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++|+++.+|||+.+
T Consensus       226 ~~~~~G~~~~~~gg~~~  242 (242)
T TIGR01829       226 AGYITGATLSINGGLYM  242 (242)
T ss_pred             hcCccCCEEEecCCccC
Confidence            88999999999999753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-37  Score=269.03  Aligned_cols=221  Identities=27%  Similarity=0.316  Sum_probs=189.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++.+|++|||||++|||++++++|+++|++|++++|+++.++++.+++     .+.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            3578899999999999999999999999999999999988877665543     25578899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|++|||||+. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||+++|..+..+.++...|++||
T Consensus        83 g~iD~lVnnAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~asK  160 (330)
T PRK06139         83 GRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSASK  160 (330)
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHHHH
Confidence            9999999999986 446788999999999999999999999999999998865 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCC-CcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKH-GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +++.+|+++++.|+.+. ||+|+.|+||.++|++...... +.              .. ...+.....+||++|+++++
T Consensus       161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~-~~--------------~~-~~~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN-YT--------------GR-RLTPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc-cc--------------cc-cccCCCCCCCHHHHHHHHHH
Confidence            99999999999999874 8999999999999997643210 00              00 00012346799999999999


Q ss_pred             hccCC
Q 023708          247 LASEE  251 (278)
Q Consensus       247 l~s~~  251 (278)
                      ++...
T Consensus       225 ~~~~~  229 (330)
T PRK06139        225 LADRP  229 (330)
T ss_pred             HHhCC
Confidence            98644

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=258.88  Aligned_cols=247  Identities=31%  Similarity=0.391  Sum_probs=205.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+++|+++||||+++||++++++|+++|++ |++++|+.+......+.+     .+.++.+|+++++++.++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999 999999876555443332     25568899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++..+++|++||..+..+.++...|+++|
T Consensus        83 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         83 GRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence            99999999999763 35677889999999999999999999999999997754458999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++++++++.|+...+|+++.++||++.|++........   ....+.......   ...+.++..+|+|+++++.++
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~l  235 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREF---HGAPDDWLEKAA---ATQPFGRLLDPDEVARAVAFL  235 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhc---cCCChHHHHHHh---ccCCccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999754321110   001111111111   123567889999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++..++++|+.|.+|||..
T Consensus       236 ~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        236 LSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             cChhhCCccCceEeECCccc
Confidence            99888899999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-36  Score=258.15  Aligned_cols=240  Identities=29%  Similarity=0.367  Sum_probs=201.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|||||++|||.+++++|+++|++|++++|.. +...+..+.     .++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999998764 332232222     236788999999999999999999999999


Q ss_pred             cEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-----CcEEEEecCchhhcCCCCCchhh
Q 023708           91 DIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-----KGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        91 d~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|||||.... ..++.+.+.++|++.+++|+.+++.+++++.+.|.++..     .+++|++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999997532 346778899999999999999999999999999987542     35799999999999888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ++|++++.+++.++.++.++|++++.++||.+.|++.....           ......... ...|.+++.+|+|+++++
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~d~a~~i  229 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT-----------AKYDALIAK-GLVPMPRWGEPEDVARAV  229 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc-----------hhHHhhhhh-cCCCcCCCcCHHHHHHHH
Confidence            99999999999999999989999999999999998754321           111111111 123567899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+++++...+.+|+.+++|||+.+
T Consensus       230 ~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        230 AALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHhCCcccccCCCEEEECCCeec
Confidence            999998888999999999999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1e-36  Score=289.84  Aligned_cols=253  Identities=32%  Similarity=0.430  Sum_probs=209.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+       .+..+.+|++|.+++.++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999877666554332       245788999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|+||||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|.+++..++||++||..+..+.++...|++
T Consensus       490 ~~g~iDilV~nAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~a  568 (676)
T TIGR02632       490 AYGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSA  568 (676)
T ss_pred             hcCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHH
Confidence            999999999999975 3357788899999999999999999999999999987654579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCC--hhhHHHHH-hhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPS--EMLVNAYR-KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ||++++++++.++.++++.||+||+|+||.+.+  .++...+. ......+.++.+.......  ..++++.++|+|+|+
T Consensus       569 SKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~l~r~v~peDVA~  646 (676)
T TIGR02632       569 AKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK--RTLLKRHIFPADIAE  646 (676)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh--cCCcCCCcCHHHHHH
Confidence            999999999999999999999999999999864  33322111 1111112233333322222  236689999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++||+++...++||+++.+|||+.-
T Consensus       647 av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       647 AVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHhCCcccCCcCcEEEECCCchh
Confidence            99999998888999999999999763

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=257.32  Aligned_cols=227  Identities=19%  Similarity=0.210  Sum_probs=195.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCC--HHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTK--EEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~--~~~i~~~~~~~~~   85 (278)
                      +|++|+++||||++|||+++++.|+++|++|++++|+++..+++.+++      ...++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999987766654433      25678899975  6789999999998


Q ss_pred             hc-CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           86 WK-GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        86 ~~-g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      .+ +++|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|.+.+ .+++|+++|..+..+.+++..|+
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccchH
Confidence            88 78999999999765556788999999999999999999999999999998754 68999999999998988889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCC-CcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKH-GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +||++++.+++.++.|+.++ +|+|+.|.||.++|++..+..          +++           ...+...|+|++..
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~-----------~~~~~~~~~~~~~~  220 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH----------PGE-----------AKSERKSYGDVLPA  220 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC----------CCC-----------CccccCCHHHHHHH
Confidence            99999999999999999876 699999999999999754321          000           01234699999999


Q ss_pred             HHHhccCCCCCceeeEEee
Q 023708          244 ALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~  262 (278)
                      ++|++++...++||+++.+
T Consensus       221 ~~~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        221 FVWWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHHHhCccccCcCCeEeeC
Confidence            9999999999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=255.35  Aligned_cols=239  Identities=35%  Similarity=0.499  Sum_probs=198.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++++++||||+++|||.++++.|+++|++|++++|+.+..++..+++     .+.++.+|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999877666554432     256789999999999999999998889


Q ss_pred             CccEEEECCccCCCC-------CCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           89 QLDIMFNNAGISGSG-------GSI-TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        89 ~id~li~nag~~~~~-------~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      ++|++|||||.....       ..+ .+.+.+++...+++|+.+++.+++.+++.|.++...+++|++||.. ..+.++.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            999999999975321       112 6778899999999999999999999999998754467899998875 4577788


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|+++|+++++++++++.++.++||++++++||.++|++....          .+........   ..|.+++.+|+|+
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~~  227 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM----------KPEALERLEK---MIPVGRLGEPEEI  227 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc----------CHHHHHHHHh---cCCcCCCcCHHHH
Confidence            89999999999999999999998999999999999999976431          2222222222   1255788999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++.+|++  ..+++|+++.+|||+++
T Consensus       228 a~~~~~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        228 AHTVRFIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHHHHHHc--CCCcCCcEEEeCCCccC
Confidence            999999995  35899999999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=277.59  Aligned_cols=242  Identities=31%  Similarity=0.403  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc--hHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL--DELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ..+.++++|||||++|||++++++|+++|++|+++++.  .+...++.++.+..++.+|+++.++++++++.+.+.++++
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            35678999999999999999999999999999999874  3445555555666788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+.. ..++.+.+.++|+..+++|+.+++++++++++.+..+. .++||++||..+..+.++...|+++|+++
T Consensus       286 d~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g~~~~~~Y~asKaal  363 (450)
T PRK08261        286 DIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAGNRGQTNYAASKAGV  363 (450)
T ss_pred             CEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCChHHHHHHHHH
Confidence            99999999864 45778899999999999999999999999999765433 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.++.++||++|.|+||.++|++....          +. ...+.....  .++.+...|+|+|+++.||+++
T Consensus       364 ~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~----------~~-~~~~~~~~~--~~l~~~~~p~dva~~~~~l~s~  430 (450)
T PRK08261        364 IGLVQALAPLLAERGITINAVAPGFIETQMTAAI----------PF-ATREAGRRM--NSLQQGGLPVDVAETIAWLASP  430 (450)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc----------ch-hHHHHHhhc--CCcCCCCCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999876431          11 111111111  1346778999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...++||++|.+|||..+|
T Consensus       431 ~~~~itG~~i~v~g~~~~~  449 (450)
T PRK08261        431 ASGGVTGNVVRVCGQSLLG  449 (450)
T ss_pred             hhcCCCCCEEEECCCcccC
Confidence            9999999999999998765

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=255.86  Aligned_cols=240  Identities=30%  Similarity=0.419  Sum_probs=201.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++++++||||++|||.++++.|+++|++|++. .|+++...+..+..     .+.++.+|++|.+++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999874 67766555444332     35678999999999999999998877


Q ss_pred             ------CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           88 ------GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        88 ------g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                            +++|++|||||... ..++.+.+.+.|+..+++|+.+++++++.+++.|.+   .+++|++||..+..+.+++.
T Consensus        83 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             ccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCCCCCCc
Confidence                  47999999999763 356778899999999999999999999999999865   46999999999998999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      .|++||++++.++++++.++.+.+++++.++||.++|++.....         ............  .+.++...++|++
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~dva  227 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL---------DDPEIRNFATNS--SVFGRIGQVEDIA  227 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc---------cChhHHHHHHhc--CCcCCCCCHHHHH
Confidence            99999999999999999999999999999999999999865432         111122221111  2457888999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++.+++++...+++|+.++++||+++
T Consensus       228 ~~~~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        228 DAVAFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHHHHHcCcccCCcCCCEEEeCCCccC
Confidence            999999988778899999999999764

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.1e-36  Score=258.47  Aligned_cols=232  Identities=27%  Similarity=0.312  Sum_probs=192.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+ .++.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            357999999999999999999999999999999999877766543 3578899999999999999999999999999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||.. ..+++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+++|+++++|+
T Consensus        80 ~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  157 (273)
T PRK06182         80 NNAGYG-SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATKFALEGFS  157 (273)
T ss_pred             ECCCcC-CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHHHHHHHHH
Confidence            999986 446788899999999999999999999999999998755 689999999998888888889999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccC-CCCHHHH----HHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA-DMKPEEV----CKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++++.|+.+.||+++.|+||.++|++............ .....+.    ...+...  .+.++..+|+|+|++++++++
T Consensus       158 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        158 DALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST--YGSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh--hccccCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999998643221111111 1111111    1111111  145788999999999999997


Q ss_pred             CC
Q 023708          250 EE  251 (278)
Q Consensus       250 ~~  251 (278)
                      ..
T Consensus       236 ~~  237 (273)
T PRK06182        236 AR  237 (273)
T ss_pred             CC
Confidence            43

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=261.49  Aligned_cols=233  Identities=27%  Similarity=0.414  Sum_probs=189.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     ++.++.+|++|.++++++++++.+.+|
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999887766655433     256789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..|+||++||..+..+.++...|++||+
T Consensus        83 ~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  161 (275)
T PRK05876         83 HVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY  161 (275)
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence            999999999986 3467889999999999999999999999999999987654689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|+++++.|++++||++++|+||.++|++..+..............  ........  ....+.+|+|+|+.++..+
T Consensus       162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSST--TGSPGPLP--LQDDNLGVDDIAQLTADAI  237 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccc--cccccccc--ccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999865432110000000000  00000000  1134679999999999887


Q ss_pred             cCC
Q 023708          249 SEE  251 (278)
Q Consensus       249 s~~  251 (278)
                      ...
T Consensus       238 ~~~  240 (275)
T PRK05876        238 LAN  240 (275)
T ss_pred             HcC
Confidence            543

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-36  Score=255.56  Aligned_cols=244  Identities=28%  Similarity=0.401  Sum_probs=204.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+   ++.++.+|+.|.+++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            579999999999999999999999999999999887766655443   36788999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||+|.... .++.+.+.++|.+.+++|+.+++.+++++++.+.+++ .+++|++||..+..+ .+...|+.+|++++.+
T Consensus        82 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         82 VANAGAARA-ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence            999998644 4677888999999999999999999999999998755 689999999876543 4567899999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.++.++||+++.++||.++|++.....       ...+........   ..|.+++..|+|+++++++|+++...
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~l~~~~~~  228 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARV-------AANPQVFEELKK---WYPLQDFATPDDVANAVLFLASPAAR  228 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhccc-------ccChHHHHHHHh---cCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999998753211       001221121111   12567899999999999999998788


Q ss_pred             CceeeEEeecCCcccCcCcc
Q 023708          254 FITAHNLVIDGGYTTGTSSM  273 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~~~~~  273 (278)
                      +++|+.+.+|||+..++..|
T Consensus       229 ~~~g~~~~~~~g~~~~~~~~  248 (257)
T PRK07074        229 AITGVCLPVDGGLTAGNREM  248 (257)
T ss_pred             CcCCcEEEeCCCcCcCChhh
Confidence            99999999999999876544

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1e-36  Score=265.83  Aligned_cols=235  Identities=17%  Similarity=0.143  Sum_probs=190.2

Q ss_pred             EEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           21 VITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        21 lVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |||||++|||++++++|+++| ++|++++|+.+...++.+++     .+.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 99999999887766655443     256778999999999999999998889999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-CcEEEEecCchhhcC-----------------
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-KGSIICTSSSAAIMG-----------------  156 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~-----------------  156 (278)
                      ||||+.....+..+.+.++|++.|++|+.+++.+++.++|.|.+++. .++||++||..+..+                 
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99998644345668899999999999999999999999999987532 479999999876421                 


Q ss_pred             ------------------CCCCchhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCC-CChhhHHHHHhhhccCCCCH
Q 023708          157 ------------------GLASHAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGV-PSEMLVNAYRKYLGKADMKP  216 (278)
Q Consensus       157 ------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~  216 (278)
                                        ..++.+|++||+|+..+++.+++++.+ .||+|++|+||.+ .|++..+..          +
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~----------~  230 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHI----------P  230 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccccc----------H
Confidence                              124567999999999999999999975 6999999999999 788764321          0


Q ss_pred             HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          217 EEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      . ...........+.+++.+||+.|+.+++++++...+.+|+.|.+||+.
T Consensus       231 ~-~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        231 L-FRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             H-HHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            0 111110000113467889999999999999988788999999999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=267.61  Aligned_cols=239  Identities=28%  Similarity=0.299  Sum_probs=198.5

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      |+...+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++     ++.++.+|++|.++++++++++.
T Consensus         1 ~~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          1 MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3445678899999999999999999999999999999999987776665443     35678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +++|++|++|||||.. ...++.+.+.+++++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+....|+
T Consensus        81 ~~~g~iD~lInnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  158 (334)
T PRK07109         81 EELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYC  158 (334)
T ss_pred             HHCCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHH
Confidence            9999999999999975 446788999999999999999999999999999998765 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCC--CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGK--HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ++|+++++|+++++.|+..  .+|+++.|+||.++|++...... .              ... ...+..+..+|||+|+
T Consensus       159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-~--------------~~~-~~~~~~~~~~pe~vA~  222 (334)
T PRK07109        159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-R--------------LPV-EPQPVPPIYQPEVVAD  222 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-h--------------ccc-cccCCCCCCCHHHHHH
Confidence            9999999999999999974  47999999999999997643210 0              000 1113456789999999


Q ss_pred             HHHHhccCCCC--CceeeEEeecCCc
Q 023708          243 AALFLASEEAG--FITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~--~~tG~~i~~dgG~  266 (278)
                      ++++++++...  ++++..+.++.+.
T Consensus       223 ~i~~~~~~~~~~~~vg~~~~~~~~~~  248 (334)
T PRK07109        223 AILYAAEHPRRELWVGGPAKAAILGN  248 (334)
T ss_pred             HHHHHHhCCCcEEEeCcHHHHHHHHH
Confidence            99999976532  4445554444443

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=252.77  Aligned_cols=233  Identities=26%  Similarity=0.411  Sum_probs=195.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |.+|+++||||+++||++++++|+++|++|++++|+.+.      .....++.+|+++.++++++++++.+.+ ++|++|
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi   73 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DFPGELFACDLADIEQTAATLAQINEIH-PVDAIV   73 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------ccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEE
Confidence            357899999999999999999999999999999997653      1123578999999999999999998876 689999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||+|.... .++.+.+.+++++.+++|+.+++.+.+.++|.|++.+ .+++|++||... .+.++...|+++|+++++++
T Consensus        74 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~~~  150 (234)
T PRK07577         74 NNVGIALP-QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAI-FGALDRTSYSAAKSALVGCT  150 (234)
T ss_pred             ECCCCCCC-CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccc-cCCCCchHHHHHHHHHHHHH
Confidence            99998643 5677889999999999999999999999999998755 689999999864 46677889999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      ++++.+++++||++++|+||.++|++......       ..+........   ..+.++..+|+|+|.++++|++++..+
T Consensus       151 ~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~~  220 (234)
T PRK07577        151 RTWALELAEYGITVNAVAPGPIETELFRQTRP-------VGSEEEKRVLA---SIPMRRLGTPEEVAAAIAFLLSDDAGF  220 (234)
T ss_pred             HHHHHHHHhhCcEEEEEecCcccCcccccccc-------cchhHHHHHhh---cCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999998643210       01111111222   225577889999999999999988889


Q ss_pred             ceeeEEeecCCcc
Q 023708          255 ITAHNLVIDGGYT  267 (278)
Q Consensus       255 ~tG~~i~~dgG~~  267 (278)
                      ++|+.+.+|||.+
T Consensus       221 ~~g~~~~~~g~~~  233 (234)
T PRK07577        221 ITGQVLGVDGGGS  233 (234)
T ss_pred             ccceEEEecCCcc
Confidence            9999999999965

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=251.81  Aligned_cols=254  Identities=35%  Similarity=0.444  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++++|++|||||+++||++++++|+++|++|++++|+++..+++.+..   ++.++.+|++|++++.++++++.+.+++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3578899999999999999999999999999999999877766655433   3467899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||+|......++...+.++|++.+++|+.+++.+++.+++.+...+..++++++||..+..+.++...|+.+|++
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a  166 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWA  166 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHH
Confidence            99999999987555667788999999999999999999999999988775433789999999888888888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.+++.++.++...++++++++||.+.|++........................  ...+.+++.+++|++++++++++
T Consensus       167 ~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~a~~~~~l~~  244 (264)
T PRK12829        167 VVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL--EKISLGRMVEPEDIAATALFLAS  244 (264)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH--hcCCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999998889999999999999998766543221111222222221111  12255789999999999999998


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+.+|+.+.+|||...
T Consensus       245 ~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        245 PAARYITGQAISVDGNVEY  263 (264)
T ss_pred             ccccCccCcEEEeCCCccc
Confidence            7777889999999999763

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=252.82  Aligned_cols=235  Identities=24%  Similarity=0.289  Sum_probs=194.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ..+|++|||||++|||++++++|+++|++|+++.+. .+..+.+.+.+     .+.++.+|++|.+++.++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999887653 44444443322     366789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.+.+.+.. .+++|+++|..+..+.+.+..|++||+
T Consensus        87 ~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~~p~~~~Y~~sK~  164 (258)
T PRK09134         87 PITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNLNPDFLSYTLSKA  164 (258)
T ss_pred             CCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCCCCCchHHHHHHH
Confidence            9999999999763 35678889999999999999999999999999997654 689999999888778888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++.+. |+++.++||++.|+...            .+........   ..+.++..+|+|+|+++++++
T Consensus       165 a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~------------~~~~~~~~~~---~~~~~~~~~~~d~a~~~~~~~  228 (258)
T PRK09134        165 ALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ------------SPEDFARQHA---ATPLGRGSTPEEIAAAVRYLL  228 (258)
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEeecccccCCccc------------ChHHHHHHHh---cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999765 99999999999875421            1112222211   224577889999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +.  .+++|+.+.+|||..+.
T Consensus       229 ~~--~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        229 DA--PSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             cC--CCcCCCEEEECCCeecc
Confidence            73  57899999999998644

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=250.38  Aligned_cols=239  Identities=38%  Similarity=0.558  Sum_probs=205.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||+++||.++++.|+++|++|+++ +|+.+...++.+.+     ++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5778999999999999999999999999999998 88876665554432     25678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||+|.. ...++.+.+.+++++.+++|+.+++.+++.+.+.+.+++ .+++|++||..+..+.+....|+.+|
T Consensus        82 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 GKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHHH
Confidence            9999999999986 446677889999999999999999999999999998755 68999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.+.|+++++++||.++|++.....          +........   ..+.++..+|+|+++.++++
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~va~~~~~l  226 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS----------EEDKEGLAE---EIPLGRLGKPEEIAKVVLFL  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC----------hHHHHHHHh---cCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999889999999999999998754321          111111111   12446788999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++....++|+.+.+|+|++
T Consensus       227 ~~~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        227 ASDDASYITGQIITVDGGWT  246 (247)
T ss_pred             cCCccCCccCcEEEecCCcc
Confidence            99999999999999999975

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=254.87  Aligned_cols=215  Identities=29%  Similarity=0.382  Sum_probs=190.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++++++|||||++|||++++++|+++|++|++++|+++..+++.+.++ +.++.+|++|.++++++++++.+.++++|+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5678999999999999999999999999999999999888777666554 778899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      +|||||+. ...++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++||+++++
T Consensus        82 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (273)
T PRK07825         82 LVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAVVG  159 (273)
T ss_pred             EEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHHHHHHH
Confidence            99999987 446778889999999999999999999999999998865 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      |+++++.|+.++||+++.|+||++.|++.....           .        .   ......+|+|+|+.+++++.+..
T Consensus       160 ~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----------~--------~---~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        160 FTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----------G--------A---KGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----------c--------c---cCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998754210           0        0   11236789999999999987553

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=248.27  Aligned_cols=237  Identities=30%  Similarity=0.466  Sum_probs=198.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec----chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r----~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++.+++++||||++|||++++++|+++|++|++++|    ..+...++.++.     .+.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999998654    334444333322     35688999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA-KAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +.++++|.+|||+|.... .++.+.+.++|++.+++|+.+++.+++++. +.+.+.+ .+++|++||..+..+.++...|
T Consensus        83 ~~~~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         83 EEFGRLDILVNNAGIATD-AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHhCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCchh
Confidence            988999999999998643 577888999999999999999999999999 5554433 6799999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +.+|++++.+++.++.++++.|+++++++||.++|++.....          +.  .....   ..+..++.+++|++++
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~----------~~--~~~~~---~~~~~~~~~~~~va~~  225 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA----------PT--EHLLN---PVPVQRLGEPDEVAAL  225 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc----------hH--HHHHh---hCCCcCCcCHHHHHHH
Confidence            999999999999999999988999999999999999754321          11  11111   1244667799999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++++++...+++|+.+.+|||++
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        226 VAFLVSDAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             HHHHcCcccCCccCcEEEeCCCCC
Confidence            999998888899999999999974

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-35  Score=248.96  Aligned_cols=237  Identities=29%  Similarity=0.417  Sum_probs=196.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |++|||||+++||++++++|+++|++|++. .|+.+...+...++     ++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999874 56655554443322     256789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCC-CchhhhhHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLA-SHAYSLSKE  168 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~-~~~Y~~sK~  168 (278)
                      +||||+|......++.+.+.++|+..+++|+.+++.+++.+++.+.++.  +.+++|++||..+..+.++ +..|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            9999999765556778889999999999999999999999999997642  3578999999988887775 467999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++.++||++++++||.++|++....         ..+........   ..|.++..+|+|+|+++++++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~~~  229 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG---------GEPGRVDRVKS---NIPMQRGGQPEEVAQAIVWLL  229 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC---------CCHHHHHHHHh---cCCCCCCcCHHHHHHHHHhhc
Confidence            999999999999998999999999999999964321         01221222211   225567789999999999999


Q ss_pred             cCCCCCceeeEEeecCCc
Q 023708          249 SEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~  266 (278)
                      ++...+++|+++.+|||.
T Consensus       230 ~~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        230 SDKASYVTGSFIDLAGGK  247 (247)
T ss_pred             ChhhcCccCcEEecCCCC
Confidence            988889999999999973

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=5.4e-35  Score=247.23  Aligned_cols=242  Identities=36%  Similarity=0.481  Sum_probs=204.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+......+.+     .+.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999999865554443322     256789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK  167 (278)
                      ++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .+++|++||..+. .+.++...|+.+|
T Consensus        83 ~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIFPL-TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999997644 5677888999999999999999999999999998755 6899999999988 7888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.+.|++++.++||.+.|+......          +.........  ..|.+++.+++|+|+++.++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l  228 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG----------DAQWAEAIAA--AIPLGRLGEPEDIAAAVLFL  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC----------chHHHHHHHh--cCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999888999999999999999764321          1110111111  22556889999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++...+++|+.+.+|||..+.
T Consensus       229 ~~~~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        229 ASDEARYITGQTLPVDGGATLP  250 (251)
T ss_pred             hCccccCcCCcEEEECCCccCC
Confidence            9888888999999999998763

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=251.07  Aligned_cols=239  Identities=21%  Similarity=0.197  Sum_probs=195.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCC--cc-
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQ--LD-   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~--id-   91 (278)
                      |++|||||++|||++++++|+++|++|++++|++ +...++.+..  ++.++.+|+++.++++++++++.+.++.  ++ 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            6899999999999999999999999999999976 4444444332  3668899999999999999998877653  22 


Q ss_pred             -EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           92 -IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        92 -~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                       ++|||||......++.+.+.++|.+.+++|+.+++.+++.++|.|.+.+..++||++||..+..+.++...|+++|+++
T Consensus        82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  161 (251)
T PRK06924         82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGL  161 (251)
T ss_pred             eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHH
Confidence             8999999876666788999999999999999999999999999998744357999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          171 IGLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       171 ~~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++++.++.|++  +.+|+|+.|.||+++|++........    .............   .+.+++.+|+|+|+.+++++
T Consensus       162 ~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~  234 (251)
T PRK06924        162 DMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSS----KEDFTNLDRFITL---KEEGKLLSPEYVAKALRNLL  234 (251)
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcC----cccchHHHHHHHH---hhcCCcCCHHHHHHHHHHHH
Confidence            999999999975  46899999999999999865432110    0011112222221   14578999999999999999


Q ss_pred             cCCCCCceeeEEeecC
Q 023708          249 SEEAGFITAHNLVIDG  264 (278)
Q Consensus       249 s~~~~~~tG~~i~~dg  264 (278)
                      ++. .+.+|+.+.+|+
T Consensus       235 ~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        235 ETE-DFPNGEVIDIDE  249 (251)
T ss_pred             hcc-cCCCCCEeehhh
Confidence            874 789999999886

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=253.60  Aligned_cols=244  Identities=26%  Similarity=0.321  Sum_probs=201.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |+++||||++|||++++++|+++|++|++++|+++..++..+++.      ..++.+|+++.++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999998776655543321      34578999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||+|.. ...++.+.+.++++..+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|+++|++++
T Consensus        81 ~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            999999976 4467789999999999999999999999999999976544689999999998888888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++++++.|+.+++|+++.|+||.++|++..+....  ... ...+........    ..++..+|+|+|+.+++++. .
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~-~~~~~~~~~~~~----~~~~~~~~~~vA~~~~~~~~-~  231 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIA--GVD-REDPRVQKWVDR----FRGHAVTPEKAAEKILAGVE-K  231 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhccccc--ccC-cchhhHHHHHHh----cccCCCCHHHHHHHHHHHHh-c
Confidence            999999999999999999999999999986543100  000 011111121111    23567899999999999995 5


Q ss_pred             CCCceeeEEeecCCcccCc
Q 023708          252 AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~~  270 (278)
                      ..+++++.+.+++|+.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        232 NRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             CCeEEecCcchHHHHHHHh
Confidence            5789999999999976543

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=259.08  Aligned_cols=238  Identities=21%  Similarity=0.215  Sum_probs=187.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+ ++.++.+|++|.++++++++++.+.++++|
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence            4678999999999999999999999999999999999987776665543 377899999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------CCCC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------GGLA  159 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~  159 (278)
                      +||||||+...   ..+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||.....            +.++
T Consensus       102 ~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  177 (315)
T PRK06196        102 ILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDK  177 (315)
T ss_pred             EEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCCh
Confidence            99999997532   23556788999999999999999999999998754 58999999986532            2344


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH-HHHhhcCCCCC-CCCCCH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC-KMVRDSGSLLR-GRSASI  237 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~  237 (278)
                      ...|+.||++++.+++.++.++.++||++++|+||.+.|++.....         ...... ....... .++ .++.+|
T Consensus       178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~  247 (315)
T PRK06196        178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLP---------REEQVALGWVDEHG-NPIDPGFKTP  247 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCC---------hhhhhhhhhhhhhh-hhhhhhcCCH
Confidence            5689999999999999999999999999999999999999753211         000000 0111000 011 256799


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      +|+|..++||++.+....+|..+..|.
T Consensus       248 ~~~a~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        248 AQGAATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             hHHHHHHHHHhcCCccCCCCCeEeCCC
Confidence            999999999997554433444444443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.1e-34  Score=244.69  Aligned_cols=241  Identities=35%  Similarity=0.501  Sum_probs=201.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||+++||+++++.|+++|++|++..|+.+ ......+.     .++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999987776543 23333222     135678899999999999999999989


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||+|.... .+..+.+.+++++.+++|+.+++.+.+.+.+.+.+.+ .+++|++||..+..+.++...|+++|
T Consensus        82 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 GGVDILVNNAGITRD-NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCCCEEEECCCcCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHHH
Confidence            999999999997643 4666788899999999999999999999999997754 57999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.+.+++++.++||+++|++....          .+........   ..+.+++.+|+|+++++.+|
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~va~~~~~l  226 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL----------PEDVKEAILA---QIPLGRLGQPEEIASAVAFL  226 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc----------ChHHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999998899999999999998875432          1111112221   12457788999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +.+...+++|+.+++|||++++
T Consensus       227 ~~~~~~~~~g~~~~i~~~~~~~  248 (248)
T PRK05557        227 ASDEAAYITGQTLHVNGGMVMG  248 (248)
T ss_pred             cCcccCCccccEEEecCCccCC
Confidence            9887789999999999998864

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-35  Score=246.97  Aligned_cols=229  Identities=24%  Similarity=0.325  Sum_probs=198.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCC--CHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVT--KEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~--~~~~i~~~~~~~~   84 (278)
                      ..+++|++|||||+++||.+++++|+++|++|++++|+.+..+++.+++      ++.++.+|++  +.+++.++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999877665554432      2456777775  7899999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.++++|+||||||......++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+++..|+
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~  166 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYA  166 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCcccH
Confidence            99999999999999865656778889999999999999999999999999998765 68999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.+++.++.++...+|++++++||.+.|++....+.         ..            ...++.+|+|+++.+
T Consensus       167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------~~------------~~~~~~~~~~~~~~~  225 (247)
T PRK08945        167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP---------GE------------DPQKLKTPEDIMPLY  225 (247)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC---------cc------------cccCCCCHHHHHHHH
Confidence            999999999999999999999999999999999987543220         00            114578999999999


Q ss_pred             HHhccCCCCCceeeEEeec
Q 023708          245 LFLASEEAGFITAHNLVID  263 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~d  263 (278)
                      +|++++...+++|+++...
T Consensus       226 ~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        226 LYLMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             HHHhCccccccCCeEEeCC
Confidence            9999999999999997654

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=245.55  Aligned_cols=233  Identities=27%  Similarity=0.302  Sum_probs=200.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh---hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST---IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ..+++|++|||||+++||++++++|+++|++|++++|+.+...+..+.   ..+..+.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            357789999999999999999999999999999999976554443222   24677889999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+|||++|... ..++.+.+.+++++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..+.++...|+++|++
T Consensus        83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~a  160 (239)
T PRK12828         83 LDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAKAG  160 (239)
T ss_pred             cCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHHHHH
Confidence            999999999763 34667778999999999999999999999999998755 6899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.+++.++.++.+.+++++.+.||.+.+++.....         +..            +..++.+++|+|++++++++
T Consensus       161 ~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~---------~~~------------~~~~~~~~~dva~~~~~~l~  219 (239)
T PRK12828        161 VARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM---------PDA------------DFSRWVTPEQIAAVIAFLLS  219 (239)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC---------Cch------------hhhcCCCHHHHHHHHHHHhC
Confidence            999999999999888999999999999988543211         100            12346789999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.+.+|||+.+
T Consensus       220 ~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        220 DEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             cccccccceEEEecCCEeC
Confidence            8777899999999999865

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-35  Score=250.52  Aligned_cols=231  Identities=24%  Similarity=0.278  Sum_probs=188.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-CCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-GQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id~li~   95 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+. ++.++.+|++|.++++++++++.+.+ |++|+|||
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            68999999999999999999999999999999998877766543 57789999999999999999997766 68999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||.. ...++.+.+.++++..+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|++||+++++|++
T Consensus        83 ~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  160 (277)
T PRK05993         83 NGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSL  160 (277)
T ss_pred             CCCcC-CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHHHHHHHHHH
Confidence            99986 345778899999999999999999999999999998765 6899999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCC----CHHHHHHH---HhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM----KPEEVCKM---VRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.|+.++||+++.|+||+++|++..............    ..+.....   ..... .+.....+||++|+.++..+
T Consensus       161 ~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~i~~a~  239 (277)
T PRK05993        161 TLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGG-SKSRFKLGPEAVYAVLLHAL  239 (277)
T ss_pred             HHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhh-hccccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999876543221111000    00111111   11100 01123468999999999998


Q ss_pred             cCC
Q 023708          249 SEE  251 (278)
Q Consensus       249 s~~  251 (278)
                      ...
T Consensus       240 ~~~  242 (277)
T PRK05993        240 TAP  242 (277)
T ss_pred             cCC
Confidence            654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.7e-35  Score=246.02  Aligned_cols=242  Identities=27%  Similarity=0.328  Sum_probs=197.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++++|||||+++||++++++|+++|++|++..|. .+........     .+..++.+|+++.+++.++++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999887653 2333222211     124578899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||||.. ...++.+.+.+++++.+++|+.+++.+++++.+.+.+   .+++|++||..++.+.++...|+++|
T Consensus        83 ~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (252)
T PRK06077         83 GVADILVNNAGLG-LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAYGLSIYGAMK  158 (252)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCCCchHHHHHH
Confidence            9999999999985 3356778888999999999999999999999999865   47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++++++.++.++.+ +|+++.+.||+++|++.....+..    ........   ...  .+.+++.+|+|+|++++++
T Consensus       159 ~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~----~~~~~~~~---~~~--~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        159 AAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVL----GMSEKEFA---EKF--TLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcc----cccHHHHH---Hhc--CcCCCCCCHHHHHHHHHHH
Confidence            9999999999999987 999999999999999865432110    01111111   111  1346789999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +++  .+.+|+.+++|+|+.+...
T Consensus       229 ~~~--~~~~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        229 LKI--ESITGQVFVLDSGESLKGG  250 (252)
T ss_pred             hCc--cccCCCeEEecCCeeccCC
Confidence            963  3688999999999987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=252.34  Aligned_cols=232  Identities=21%  Similarity=0.218  Sum_probs=188.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+|++|||||++|||++++++|+++|++|++++|+.+....+.+..  ++.++.+|++|.+++.++++++.+.++++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4688999999999999999999999999999999987776665432  35678999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .+++|++||..+..+.+++..|+++|++++.+
T Consensus        83 v~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         83 VNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EECCCcc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            9999986 445778899999999999999999999999999998755 67999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCH--HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKP--EEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++++.++++.|++++.|+||.++|++........  ......  .............+..++.+|+|+|++++++++..
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRT--PRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccC--CCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999998643211100  000000  00101111111113356789999999999998755

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.7e-35  Score=278.16  Aligned_cols=255  Identities=36%  Similarity=0.453  Sum_probs=214.4

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ....+.+|++|||||++|||+++++.|+++|++|++++|+.+......+.+    .+.++.+|++++++++++++++.+.
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            344578999999999999999999999999999999999987776655543    4568899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|.+++..++||++||..+..+.++...|+++
T Consensus       496 ~g~iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~as  574 (681)
T PRK08324        496 FGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAA  574 (681)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHH
Confidence            99999999999986 44678888999999999999999999999999999876534899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCC--CChhhHHHHHh-hhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGV--PSEMLVNAYRK-YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v--~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |++++++++.++.++++.||+++.|+||.+  .|+++.+.+.. .....+.++++........  .+.++.++|+|+|++
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~l~~~v~~~DvA~a  652 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRAR--NLLKREVTPEDVAEA  652 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhc--CCcCCccCHHHHHHH
Confidence            999999999999999999999999999999  78766543211 1112223333332222222  256789999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++++...+.+|+.+++|||...
T Consensus       653 ~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        653 VVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHhCccccCCcCCEEEECCCchh
Confidence            9999987778899999999999764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=4.1e-34  Score=242.46  Aligned_cols=248  Identities=33%  Similarity=0.467  Sum_probs=205.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+     ++.++.+|+++.++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            478999999999999999999999999999999877666655432     356788999999999999999999889999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||+|.... .+..+.+.+++++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.+....|+.+|++++
T Consensus        81 ~vi~~a~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQHV-APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999997643 4566778899999999999999999999999997654 579999999998888888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH-HHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC-KMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      .+++.++.++.+.+++++.++||.+.+++.................... .....  ..+.+.+.+++|+|+++++++++
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~~~~~~~~~  236 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLP--GQPTKRFVTVDEVAETALFLASD  236 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHc--cCccccCcCHHHHHHHHHHHcCc
Confidence            9999999999888999999999999999876544322222222222221 11111  11346689999999999999987


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      .....+|+++++|||++.
T Consensus       237 ~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       237 AAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             cccCccceEEEEcCcccc
Confidence            666789999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.5e-37  Score=233.40  Aligned_cols=241  Identities=32%  Similarity=0.438  Sum_probs=213.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+|-+.||||+.+|+|++.+++|+++|+.|++.+-.++...+..++++  +.|.++|+++++++...++..+.+||++|
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            4578899999999999999999999999999999988877888877776  57889999999999999999999999999


Q ss_pred             EEEECCccCCCCCC-----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-----CCcEEEEecCchhhcCCCCCc
Q 023708           92 IMFNNAGISGSGGS-----ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-----RKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        92 ~li~nag~~~~~~~-----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      .+|||||+....+.     -...+.|++++.+++|++|+|++++...-.|.+..     ..|.||++.|.+++.+..+..
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqa  165 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQA  165 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchh
Confidence            99999998644332     24567899999999999999999999999996532     247899999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      +|++||.++.+++.-++++++..|||++.|.||.++||+...           -|+.+..++....+.| .|++.|.|.+
T Consensus       166 aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss-----------lpekv~~fla~~ipfp-srlg~p~eya  233 (260)
T KOG1199|consen  166 AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS-----------LPEKVKSFLAQLIPFP-SRLGHPHEYA  233 (260)
T ss_pred             hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh-----------hhHHHHHHHHHhCCCc-hhcCChHHHH
Confidence            999999999999999999999999999999999999999875           3677777777766644 7999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..+-.+.  +..|++|++|.+||...+
T Consensus       234 hlvqaii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  234 HLVQAII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHHHHHH--hCcccCCeEEEecceecC
Confidence            9999998  556999999999998765

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-35  Score=250.07  Aligned_cols=242  Identities=26%  Similarity=0.247  Sum_probs=196.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+++.+..  .+.++.+|++|+++++++++.+.+.++++|++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999987776665543  35678999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .+++|++||..+..+.++...|+++|++++.+
T Consensus        82 i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (275)
T PRK08263         82 VNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEGM  159 (275)
T ss_pred             EECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence            9999986 446788899999999999999999999999999998755 67999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC-CCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS-ASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~edva~~~~~l~s~~~  252 (278)
                      ++.++.++++.||+++.++||.++|++........  ......+.........  .+.+++ ++|+|+++++++++++. 
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~p~dva~~~~~l~~~~-  234 (275)
T PRK08263        160 SEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRA--TPLDAYDTLREELAEQ--WSERSVDGDPEAAAEALLKLVDAE-  234 (275)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCccCCccccccccC--CCchhhhhHHHHHHHH--HHhccCCCCHHHHHHHHHHHHcCC-
Confidence            99999999999999999999999999874211000  0000011111111111  133566 89999999999999754 


Q ss_pred             CCceeeEEeecCC
Q 023708          253 GFITAHNLVIDGG  265 (278)
Q Consensus       253 ~~~tG~~i~~dgG  265 (278)
                       ...++.+...++
T Consensus       235 -~~~~~~~~~~~~  246 (275)
T PRK08263        235 -NPPLRLFLGSGV  246 (275)
T ss_pred             -CCCeEEEeCchH
Confidence             344555654443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.6e-34  Score=242.04  Aligned_cols=240  Identities=34%  Similarity=0.521  Sum_probs=204.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +|.+|++|||||+++||+++++.|+++|++|++++|+.+..+.+...+     ++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            566789999999999999999999999999999999877665544332     256788999999999999999998889


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++||++|.... .+..+.+.+++++.+++|+.+++++++++.+.+.+.+ .+++|++||..+..+......|+.+|+
T Consensus        82 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         82 ALDILVNNAGITRD-ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCEEEECCCcCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            99999999997644 5667888999999999999999999999999997654 579999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++++++++.+.|++++.++||.+.++......          .........   ..+.+++.+++|+++++.+++
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~~~~dva~~~~~~~  226 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP----------EEVKAEILK---EIPLGRLGQPEEVANAVAFLA  226 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh----------HHHHHHHHh---cCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999888999999999999998764311          111111111   124577899999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...+++|+.+.+|||..+
T Consensus       227 ~~~~~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        227 SDAASYITGQVIPVNGGMYM  246 (246)
T ss_pred             CchhcCccCCEEEeCCCeeC
Confidence            98888999999999999864

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-35  Score=243.09  Aligned_cols=225  Identities=28%  Similarity=0.362  Sum_probs=185.0

Q ss_pred             EEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           21 VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        21 lVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      |||||++|||++++++|+++|++|++++|+.+..+...+.+    +++++.+|+++.+++.+++++    .+++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            69999999999999999999999999999877666554433    467889999999999998875    4789999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS  176 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~  176 (278)
                      +|.... .++.+.+.+++++.+++|+.+++.+++  .+.+.+   .++||++||..++.+.++...|+++|+++++++++
T Consensus        77 ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADTPG-GPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCCCC-CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            998643 577888999999999999999999999  444432   58999999999999999999999999999999999


Q ss_pred             HHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCce
Q 023708          177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFIT  256 (278)
Q Consensus       177 l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~t  256 (278)
                      ++.|+.+  |+++.++||+++|++.......       ..........  ...+.++..+|+|+|+++++|+++  .+.+
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~--~~~~  217 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGD-------AREAMFAAAA--ERLPARRVGQPEDVANAILFLAAN--GFTT  217 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhcc-------chHHHHHHHH--hcCCCCCCcCHHHHHHHHHHHhcC--CCcC
Confidence            9999974  9999999999999986532100       0111111111  123567888999999999999974  5899


Q ss_pred             eeEEeecCCccc
Q 023708          257 AHNLVIDGGYTT  268 (278)
Q Consensus       257 G~~i~~dgG~~~  268 (278)
                      |+++.+|||.++
T Consensus       218 G~~~~v~gg~~~  229 (230)
T PRK07041        218 GSTVLVDGGHAI  229 (230)
T ss_pred             CcEEEeCCCeec
Confidence            999999999764

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.3e-35  Score=274.90  Aligned_cols=234  Identities=29%  Similarity=0.403  Sum_probs=193.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..+.++++|||||++|||++++++|+++|++|++++|+.+..+++.+.+     ++.++.+|++|.+++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3467899999999999999999999999999999999987776655433     25788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+. ...++.+.+.+++++.+++|+.++++++++++|.|.+++..|+||++||.+++.+.++...|++||
T Consensus       391 g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  469 (582)
T PRK05855        391 GVPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK  469 (582)
T ss_pred             CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence            9999999999986 346788899999999999999999999999999998865468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++++++++.|++++||+|++|+||+++|++.....  .   .+...++...........+..+..+|||+|+.++++
T Consensus       470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~  544 (582)
T PRK05855        470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTR--F---AGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDA  544 (582)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccc--c---CCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999876421  0   111111111111111111234556899999999999


Q ss_pred             ccCCC
Q 023708          248 ASEEA  252 (278)
Q Consensus       248 ~s~~~  252 (278)
                      ++...
T Consensus       545 ~~~~~  549 (582)
T PRK05855        545 VKRNK  549 (582)
T ss_pred             HHcCC
Confidence            97553

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.5e-34  Score=252.78  Aligned_cols=239  Identities=15%  Similarity=0.119  Sum_probs=186.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|+++||||++|||++++++|+++| ++|++++|+.+..+++.+++.     +.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 999999999877766655432     467889999999999999999888899


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcC------------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMG------------  156 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~------------  156 (278)
                      +|+||||||+.....+..+.+.++|++.+++|+.+++.+++.++|.|.+++ +.++||++||..+..+            
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999754333345678899999999999999999999999998753 2479999999876421            


Q ss_pred             ---------------------CCCCchhhhhHHHHHHHHHHHHHHHC-CCCcEEEEecCCCC-CChhhHHHHHhhhccCC
Q 023708          157 ---------------------GLASHAYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGV-PSEMLVNAYRKYLGKAD  213 (278)
Q Consensus       157 ---------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~-~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~  213 (278)
                                           ..++.+|++||+|+..+++.+++++. ++||+|++|+||.+ .|++........     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~-----  236 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLF-----  236 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHH-----
Confidence                                 12456799999999999999999985 46899999999999 688864311000     


Q ss_pred             CCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          214 MKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                        ..........    ..+++.+|++.|+.+++++.+.....+|..|..++.
T Consensus       237 --~~~~~~~~~~----~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~  282 (314)
T TIGR01289       237 --RTLFPPFQKY----ITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNR  282 (314)
T ss_pred             --HHHHHHHHHH----HhccccchhhhhhhhHHhhcCcccCCCceeeecCCc
Confidence              0000000010    113467899999999998876544457887766543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=3.4e-34  Score=242.50  Aligned_cols=230  Identities=19%  Similarity=0.224  Sum_probs=190.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++++||||++|||.+++++|+++|++|++++|+++..+.+.+..  ++.++.+|+++.++++++++++.+.++++|++||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46999999999999999999999999999999988777665543  3668899999999999999999999999999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||......++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .+++|++||..+..+.++...|+++|++++++++
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHHHHHHHHHH
Confidence            999764445677889999999999999999999999999998754 6899999999998888888999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCc
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  255 (278)
                      .++.++.+++|+++.|.||.+.++......   ..   ..+........      .....+|+|+|++++++++....+.
T Consensus       160 ~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~---~~---~~~~~~~~~~~------~~~~~~~~dvA~~~~~l~~~~~~~~  227 (248)
T PRK10538        160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVR---FK---GDDGKAEKTYQ------NTVALTPEDVSEAVWWVATLPAHVN  227 (248)
T ss_pred             HHHHHhcCCCcEEEEEeCCeecccccchhh---cc---CcHHHHHhhcc------ccCCCCHHHHHHHHHHHhcCCCccc
Confidence            999999999999999999999855432210   00   01111111111      1235699999999999998777666


Q ss_pred             eeeEE
Q 023708          256 TAHNL  260 (278)
Q Consensus       256 tG~~i  260 (278)
                      +++..
T Consensus       228 ~~~~~  232 (248)
T PRK10538        228 INTLE  232 (248)
T ss_pred             chhhc
Confidence            66543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=241.32  Aligned_cols=222  Identities=27%  Similarity=0.302  Sum_probs=189.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|+++||||+++||++++++|+++|++|++++|+.+...++.+.+     ++.++.+|+++.+++.++++++.+.++++|
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD   85 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999999999887666554432     366789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.+++..|+++|++++
T Consensus        86 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         86 VLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             EEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            9999999763 35677888999999999999999999999999998754 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.++.+.||+++.|+||+++|++.....        ..+     .      ....+..+|+|+|++++++++++
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--------~~~-----~------~~~~~~~~~~~va~~~~~l~~~~  224 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--------VQA-----D------FDRSAMLSPEQVAQTILHLAQLP  224 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--------ccc-----c------cccccCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999743210        000     0      01134679999999999999977


Q ss_pred             CCCceeeE
Q 023708          252 AGFITAHN  259 (278)
Q Consensus       252 ~~~~tG~~  259 (278)
                      ...+.++.
T Consensus       225 ~~~~~~~~  232 (241)
T PRK07454        225 PSAVIEDL  232 (241)
T ss_pred             ccceeeeE
Confidence            66555443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=6e-35  Score=245.02  Aligned_cols=221  Identities=19%  Similarity=0.158  Sum_probs=180.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++++||||++|||++++++|+++|  +.|++..|+....  . ...++.++++|+++.++++++.    ++++++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~-~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F-QHDNVQWHALDVTDEAEIKQLS----EQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c-ccCceEEEEecCCCHHHHHHHH----HhcCCCCEEEE
Confidence            479999999999999999999985  5666666654321  1 1224678999999999888854    45689999999


Q ss_pred             CCccCCC-----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc---CCCCCchhhhhH
Q 023708           96 NAGISGS-----GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM---GGLASHAYSLSK  167 (278)
Q Consensus        96 nag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~Y~~sK  167 (278)
                      |||....     ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++++++||..+..   +.+++..|+++|
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~asK  152 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASK  152 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchhhhhH
Confidence            9998642     34567888999999999999999999999999997654 57999998865532   345677999999


Q ss_pred             HHHHHHHHHHHHHHCC--CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGK--HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +++++|+++++.|+.+  .+|+|+.|+||.++|++.....                  .   ..|.++..+|||+|+.++
T Consensus       153 ~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------------------~---~~~~~~~~~~~~~a~~~~  211 (235)
T PRK09009        153 AALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------------------Q---NVPKGKLFTPEYVAQCLL  211 (235)
T ss_pred             HHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------------------h---ccccCCCCCHHHHHHHHH
Confidence            9999999999999976  5999999999999999864211                  0   113466789999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcc
Q 023708          246 FLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++++...+.+|+.+.+|||+.
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        212 GIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHcCChhhCCcEEeeCCcCC
Confidence            9999988899999999999985

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-34  Score=243.20  Aligned_cols=212  Identities=23%  Similarity=0.244  Sum_probs=182.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+    ++.++.+|+++.+++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            478999999999999999999999999999999887777665543    4678899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      +|||||.........+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|++||++++.
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            999999764333334478899999999999999999999999998765 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      ++++++.|+.++||+++.|+||.++|++.....                       .+.....+|+++++.++..+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------------------~~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP-----------------------YPMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC-----------------------CCCCCccCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998753200                       011224689999999999986543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=7.1e-34  Score=240.75  Aligned_cols=238  Identities=38%  Similarity=0.532  Sum_probs=196.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhhh------CCeEEEecCCC-HHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALASTI------GGRYIHCDVTK-EEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~~------~~~~~~~D~~~-~~~i~~~~~~~~   84 (278)
                      .+++|++|||||++|||+++|++|+++|++|+++.+..+.  .+.+.+..      ...+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999998888776443  33333322      34567799998 999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC-chh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAY  163 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y  163 (278)
                      +.+|++|++|||||+.....++.+.+.++|++.+++|+.+++.+++.+.|.+.+   . +||++||..+. +.++. ..|
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CCCCCcchH
Confidence            999999999999998643247889999999999999999999999988888873   2 99999999999 87774 899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+.+|++.++.|+.++||+++.|+||.+.|++........       ...........   +.+|+..|+++++.
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~  226 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-------LEALKRLAARI---PLGRLGTPEEVAAA  226 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-------hhHHHHHHhcC---CCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999887543211       00011111111   44588999999999


Q ss_pred             HHHhccCC-CCCceeeEEeecCCc
Q 023708          244 ALFLASEE-AGFITAHNLVIDGGY  266 (278)
Q Consensus       244 ~~~l~s~~-~~~~tG~~i~~dgG~  266 (278)
                      +.++.+.. ..+++|+.+.+|||.
T Consensus       227 ~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         227 VAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHHHcCcchhccccCCEEEeCCCC
Confidence            99998764 778999999999986

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-34  Score=247.71  Aligned_cols=220  Identities=25%  Similarity=0.309  Sum_probs=183.6

Q ss_pred             CccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHH
Q 023708            8 NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus         8 ~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +++....+++|+++||||++|||+++|+.|+++|++|++++|+.+..+++.+.+     .+.++.+|++|.+++.+++++
T Consensus        31 ~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  110 (293)
T PRK05866         31 PPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD  110 (293)
T ss_pred             CCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            555566788999999999999999999999999999999999987776665433     256789999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCCC
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSL--NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLA  159 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~  159 (278)
                      +.+.+|++|++|||||.... .++.+.  +.++++..+++|+.+++.++++++|.|.+.+ .+++|++||.++.. +.++
T Consensus       111 ~~~~~g~id~li~~AG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~  188 (293)
T PRK05866        111 VEKRIGGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPL  188 (293)
T ss_pred             HHHHcCCCCEEEECCCCCCC-cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCC
Confidence            99999999999999997643 344432  4688999999999999999999999998765 68999999987654 4677


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|++||+++++|+++++.|+.++||+++.|+||.++|++.....         .          ..  . ....+||+
T Consensus       189 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~---------~----------~~--~-~~~~~pe~  246 (293)
T PRK05866        189 FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK---------A----------YD--G-LPALTADE  246 (293)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc---------c----------cc--C-CCCCCHHH
Confidence            8899999999999999999999999999999999999999864210         0          00  0 12458999


Q ss_pred             HHHHHHHhccCC
Q 023708          240 VAQAALFLASEE  251 (278)
Q Consensus       240 va~~~~~l~s~~  251 (278)
                      +|+.++..+...
T Consensus       247 vA~~~~~~~~~~  258 (293)
T PRK05866        247 AAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHhcC
Confidence            999998888543

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=245.45  Aligned_cols=248  Identities=22%  Similarity=0.250  Sum_probs=196.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |++|++|||||+++||+++++.|+++|++|++++|+.+..+++.+..       ++.++.+|++|.+++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46789999999999999999999999999999999877666554321       35678999999999999 99999899


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||||... ...+.+.+.+++++.+++|+.+++.+++.++|.|++.+ .+++|++||..+..+.++...|+++|
T Consensus        80 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         80 GRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhH
Confidence            99999999999764 35677889999999999999999999999999998754 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc--cCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG--KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ++++.++++++.++.++||+++.++||.++|+++.........  ............+......+.+++.+|+|+|++++
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  237 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIV  237 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHH
Confidence            9999999999999999999999999999999976533211100  00011111111111111123467899999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++....   ..+.+..|..+
T Consensus       238 ~~~~~~~~~---~~~~~~~~~~~  257 (280)
T PRK06914        238 EIAESKRPK---LRYPIGKGVKL  257 (280)
T ss_pred             HHHcCCCCC---cccccCCchHH
Confidence            999865432   35666665554

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-34  Score=244.44  Aligned_cols=228  Identities=25%  Similarity=0.314  Sum_probs=187.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++++++||||++|||++++++|+++|++|++++|+.+....   ..+++++++|++|.++++++++.+.+.+|++|+|||
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            46889999999999999999999999999999998655432   235678999999999999999999999999999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||.. ...++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+++|++++.+++
T Consensus        80 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  157 (270)
T PRK06179         80 NAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEGYSE  157 (270)
T ss_pred             CCCCC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            99986 346778889999999999999999999999999998765 6899999999999999989999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC-HHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK-PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .++.|++++||+++.|+||++.|++........   .... ..............+..+...|+++|+.++++++..
T Consensus       158 ~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        158 SLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPD---SPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHhhhCcEEEEEeCCCcccccccccCCCC---CcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999765422100   0000 011111111111113356789999999999999754

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=249.42  Aligned_cols=236  Identities=21%  Similarity=0.168  Sum_probs=184.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+...+..+.+       .+.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999876655433221       35678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc---------
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM---------  155 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~---------  155 (278)
                      +.++++|+||||||+...   ..+.+.++++..+++|+.+++.+++.++|.|.+.+ .++||++||..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCcccc
Confidence            999999999999997633   23566788999999999999999999999998754 58999999987653         


Q ss_pred             ----CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEe--cCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC
Q 023708          156 ----GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI--SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL  229 (278)
Q Consensus       156 ----~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (278)
                          +.++...|++||++++.+++.+++++++++++++++  +||+++|++.....           ...........+ 
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~-----------~~~~~~~~~~~~-  234 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP-----------RALRPVATVLAP-  234 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc-----------HHHHHHHHHHHh-
Confidence                233456899999999999999999998888777655  79999999865321           111111111111 


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                        ....+|++-+..+++++.. ..+.+|..+..||+.
T Consensus       235 --~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        235 --LLAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             --hhcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence              0124677777777777653 345689998887754

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.9e-34  Score=250.45  Aligned_cols=209  Identities=25%  Similarity=0.298  Sum_probs=169.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..|++++||||++|||+++|++|+++|++|++++|+++.++++.+++       ++..+.+|+++  ++.+.++++.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            36899999999999999999999999999999999988877665443       24567899985  2333344444444


Q ss_pred             C--CccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-C-CCCCch
Q 023708           88 G--QLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-G-GLASHA  162 (278)
Q Consensus        88 g--~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~-~~~~~~  162 (278)
                      +  ++|+||||||+... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .|+||++||..+.. + .|....
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~  207 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAV  207 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchH
Confidence            4  46799999998643 24678899999999999999999999999999998765 78999999999864 3 578889


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+|+.|+||+++|++....      .             .  .   -...+||++|+
T Consensus       208 Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~------~-------------~--~---~~~~~p~~~A~  263 (320)
T PLN02780        208 YAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR------R-------------S--S---FLVPSSDGYAR  263 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc------C-------------C--C---CCCCCHHHHHH
Confidence            999999999999999999999999999999999999975310      0             0  0   01348899999


Q ss_pred             HHHHhccC
Q 023708          243 AALFLASE  250 (278)
Q Consensus       243 ~~~~l~s~  250 (278)
                      .++..+..
T Consensus       264 ~~~~~~~~  271 (320)
T PLN02780        264 AALRWVGY  271 (320)
T ss_pred             HHHHHhCC
Confidence            98888753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-33  Score=237.11  Aligned_cols=238  Identities=32%  Similarity=0.503  Sum_probs=199.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||+++||++++++|+++|++|++..|.. +....+.+..     ++.++.+|+++.+++.++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            5568999999999999999999999999988766543 3333332221     367889999999999999999998889


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++||+||.. ...++.+.+.+++++.+++|+.+++.+++.+.+.+.+.+ .+++|++||..+..+.++...|+.+|+
T Consensus        84 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~sK~  161 (249)
T PRK12825         84 RIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAKA  161 (249)
T ss_pred             CCCEEEECCccC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHHHH
Confidence            999999999965 445667888999999999999999999999999998755 689999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++++++.++.++.+.|++++.++||.+.|++.....         .......    ....+.+++.+++|+++++.+++
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~~~~dva~~~~~~~  228 (249)
T PRK12825        162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI---------EEAREAK----DAETPLGRSGTPEDIARAVAFLC  228 (249)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc---------chhHHhh----hccCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999888999999999999999764422         1111111    11235677999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++...+.+|+++.++||..
T Consensus       229 ~~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        229 SDASDYITGQVIEVTGGVD  247 (249)
T ss_pred             CccccCcCCCEEEeCCCEe
Confidence            8888899999999999975

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-34  Score=249.29  Aligned_cols=243  Identities=21%  Similarity=0.210  Sum_probs=185.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++       .+.++.+|++|.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999877666554432       36788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--------
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--------  156 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------  156 (278)
                      +.++++|+||||||+...  +..+.+.++++..+++|+.+++.+++.++|.|.++  .++||++||..+..+        
T Consensus        89 ~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCccccc
Confidence            999999999999998643  34467789999999999999999999999999764  579999999987543        


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHH--CCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCC
Q 023708          157 ----GLASHAYSLSKEAIIGLARSTACEL--GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL  230 (278)
Q Consensus       157 ----~~~~~~Y~~sK~a~~~l~~~l~~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (278)
                          ++++..|+.||+|+..+++.++.++  .+.||+||+++||.++|++.....  .. .+..+ ..............
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~--~~-~~~~~-~~~~~~~~~~~~~~  240 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARP--EV-GRDKD-TLMVRLIRSLSARG  240 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccccc--cc-ccchh-HHHHHHHHHHhhcc
Confidence                2456689999999999999998864  457899999999999999864210  00 00001 11111111110000


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       231 ~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                       ....++++-|...++++..+.. -+|..+.-+|
T Consensus       241 -~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~~  272 (313)
T PRK05854        241 -FLVGTVESAILPALYAATSPDA-EGGAFYGPRG  272 (313)
T ss_pred             -cccCCHHHHHHHhhheeeCCCC-CCCcEECCCc
Confidence             0135889999999998864432 2476665543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.1e-34  Score=231.04  Aligned_cols=234  Identities=29%  Similarity=0.367  Sum_probs=192.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh------hCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST------IGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +++.||.+++||+.+|||++++.+|+++|..+.++..+.|..+...+.      ..+.|++||+++..++++.++++..+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999887776555544433321      12678999999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +|.||++||+||+...         .+|++.+++|+.|...-+...+|+|.++.  ..|-||++||..+..|.|-.+.|+
T Consensus        81 fg~iDIlINgAGi~~d---------kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~  151 (261)
T KOG4169|consen   81 FGTIDILINGAGILDD---------KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA  151 (261)
T ss_pred             hCceEEEEcccccccc---------hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence            9999999999998732         77999999999999999999999998743  578999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHH--HCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACE--LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e--~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      +||+++.+|+++++..  |.+.||++++||||++.|++....-.. ......++ .+.+.+...+      .-.|++++.
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~-~~~~e~~~-~~~~~l~~~~------~q~~~~~a~  223 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDAS-GGYLEYSD-SIKEALERAP------KQSPACCAI  223 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhc-CCcccccH-HHHHHHHHcc------cCCHHHHHH
Confidence            9999999999999865  567899999999999999998876321 00111122 2333333221      347999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      .++-+.+.   ..+|+.+.+|.|.
T Consensus       224 ~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  224 NIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHhh---ccCCcEEEEecCc
Confidence            99999865   5899999999986

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-34  Score=240.88  Aligned_cols=233  Identities=22%  Similarity=0.230  Sum_probs=185.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+ ..+.+...+     ++.++.+|+++.+++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999888643 333332221     35678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-----cCCCCCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-----MGGLASHA  162 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----~~~~~~~~  162 (278)
                      +++|++|||||.... .   .   .++...+++|+.+++++++++.|.|.+   .+++|++||..+.     .+.+....
T Consensus        83 ~~~d~vi~~ag~~~~-~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~~~~  152 (248)
T PRK07806         83 GGLDALVLNASGGME-S---G---MDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPEYEP  152 (248)
T ss_pred             CCCcEEEECCCCCCC-C---C---CCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCccccH
Confidence            999999999986421 1   1   134678999999999999999999854   4799999996553     23344668


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||++++.+++.++.++++.+|+++.|.||++.|++.......      ..+......     ..|.+++++|+|+|+
T Consensus       153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~dva~  221 (248)
T PRK07806        153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNR------LNPGAIEAR-----REAAGKLYTVSEFAA  221 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhcc------CCHHHHHHH-----HhhhcccCCHHHHHH
Confidence            999999999999999999999999999999999999876543311      122222111     125578999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++++++  ..+.+|+++.++||..+.
T Consensus       222 ~~~~l~~--~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        222 EVARAVT--APVPSGHIEYVGGADYFL  246 (248)
T ss_pred             HHHHHhh--ccccCccEEEecCcccee
Confidence            9999997  457899999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=239.41  Aligned_cols=217  Identities=26%  Similarity=0.345  Sum_probs=186.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++++++|||||++|||++++++|+++|++|++++|+.+..+++..++    ++.++.+|++|.++++++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            467899999999999999999999999999999999987776665443    467889999999999999998876 789


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||.. ...++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.++...|+++|++
T Consensus        81 id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         81 INVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            99999999976 345778889999999999999999999999999998754 6899999999999899999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +.+++++++.++.++||+++.++||+++|++.......           .   ...    ...+..+|+|+|+.++++++
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----------~---~~~----~~~~~~~~~~va~~i~~~~~  220 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA-----------L---NRA----LGNAMDDPEDVAAAVLQAIE  220 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc-----------c---ccc----ccCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999875432100           0   000    11356799999999999997


Q ss_pred             CC
Q 023708          250 EE  251 (278)
Q Consensus       250 ~~  251 (278)
                      ..
T Consensus       221 ~~  222 (263)
T PRK09072        221 KE  222 (263)
T ss_pred             CC
Confidence            54

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-33  Score=242.61  Aligned_cols=235  Identities=26%  Similarity=0.370  Sum_probs=187.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     ++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999876666554432     356689999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCC-----cEEEEecCchhhcCCCCCchh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK-----GSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      ++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|.++...     +++|++||..+..+.++...|
T Consensus        83 ~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         83 AVHLLFNNAGVGAG-GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCCEEEECCCCCCC-CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence            99999999998643 567788999999999999999999999999999876532     799999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhh---hcc--CCCCHHHHHHHHhhcCCCCCCCCCC
Q 023708          164 SLSKEAIIGLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKY---LGK--ADMKPEEVCKMVRDSGSLLRGRSAS  236 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
                      +++|++++.|++.++.++.  ..+|+++.+.||+++|++........   ...  ...++...........   .....+
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s  238 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAV---GSGKVT  238 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhh---hccCCC
Confidence            9999999999999999987  35799999999999999875432110   000  0011111122222111   112369


Q ss_pred             HHHHHHHHHHhccCCC
Q 023708          237 IEDVAQAALFLASEEA  252 (278)
Q Consensus       237 ~edva~~~~~l~s~~~  252 (278)
                      ++|+|+.++.++....
T Consensus       239 ~~dva~~i~~~~~~~~  254 (287)
T PRK06194        239 AEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999875443

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=6.9e-33  Score=234.04  Aligned_cols=237  Identities=28%  Similarity=0.322  Sum_probs=193.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++++|||||+++||++++++|+++|++|++++|. .+..+.+...+      .+.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999885 33333332211      25678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||||.... .++.+.+.++++..+++|+.+++.+++++.+.+.++  .+.+++++|..+..+.++...|+.||
T Consensus        84 ~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         84 GRLDALVNNASSFYP-TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            999999999997633 466778889999999999999999999999998763  47888888888888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.+ +++++.+.||++.|++....         +++.........   .+..+..+++|+++++.++
T Consensus       161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~d~a~~~~~~  227 (249)
T PRK09135        161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNS---------FDEEARQAILAR---TPLKRIGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccccc---------CCHHHHHHHHhc---CCcCCCcCHHHHHHHHHHH
Confidence            9999999999999965 79999999999999874321         122222222222   1446678999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.+ ..+.+|+++++++|...
T Consensus       228 ~~~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        228 LAD-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             cCc-cccccCcEEEECCCeec
Confidence            864 45789999999999864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=2.9e-33  Score=223.18  Aligned_cols=244  Identities=25%  Similarity=0.265  Sum_probs=208.0

Q ss_pred             CCCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILD---ELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..|+||++||+|-  ...|++.||+.|.++|++++.+...+   ++.+++.++.+ ..+++||+++.++++++++++.++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            3689999999996  46999999999999999999987654   44445555554 356899999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           87 KGQLDIMFNNAGISG---SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +|++|.|||+-|...   ..+.+.+.+.+.|...+++...+...+.+++.|.|..   .|++|-.+-..+.+..|.+...
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~vPnYNvM  158 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERVVPNYNVM  158 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceeecCCCchh
Confidence            999999999999763   2346778999999999999999999999999999965   6899999999999999998899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +.+|++++.-+|.|+.++++.|||||+|..|++.|=....+-         .....-......  -|++|.+++|||++.
T Consensus       159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~---------~f~~~l~~~e~~--aPl~r~vt~eeVG~t  227 (259)
T COG0623         159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIG---------DFRKMLKENEAN--APLRRNVTIEEVGNT  227 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccc---------cHHHHHHHHHhh--CCccCCCCHHHhhhh
Confidence            999999999999999999999999999999999876554331         111121222222  378999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      .+||+|+..+.+||+++.+|+|+....
T Consensus       228 A~fLlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         228 AAFLLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HHHHhcchhcccccceEEEcCCceeec
Confidence            999999999999999999999998554

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.5e-34  Score=222.52  Aligned_cols=185  Identities=24%  Similarity=0.269  Sum_probs=169.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+.|.++|||||++|||+++|++|.+.|-+||+++|+++++++..+... .+...||+.|.++++++++++++.|..+++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            5679999999999999999999999999999999999999998877644 667889999999999999999999999999


Q ss_pred             EEECCccCCCCCCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSI-TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ||||||+....... .+...++.++-+++|+.+|.++++.++|++.++. .+.||+|||..+..|....+.|+++|+|++
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTKAaiH  160 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKAAIH  160 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhHHHHH
Confidence            99999987443222 3455677889999999999999999999999977 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      .++.+|+..+...+|+|--+.|-.|+|+
T Consensus       161 syt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         161 SYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999988999999999999996

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=238.10  Aligned_cols=209  Identities=21%  Similarity=0.241  Sum_probs=173.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHH-HHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDEL-GAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~-~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++|++|||||++|||+++|++|+++| ++|++++|+.+. .+++.+++      +++++++|++|.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999998764 44443332      367889999999999999999886 4


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||+|....... ...+.++.++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        86 g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEE-LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCchhh-cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHHH
Confidence            899999999998633211 1123456678899999999999999999998865 68999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++.+|+++++.|+.++||+++.|+||+++|++.....                        ......+|+|+|+.++..
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~------------------------~~~~~~~~~~~A~~i~~~  219 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK------------------------EAPLTVDKEDVAKLAVTA  219 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC------------------------CCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999998753210                        001246899999999999


Q ss_pred             ccCC
Q 023708          248 ASEE  251 (278)
Q Consensus       248 ~s~~  251 (278)
                      +.+.
T Consensus       220 ~~~~  223 (253)
T PRK07904        220 VAKG  223 (253)
T ss_pred             HHcC
Confidence            8644

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=235.70  Aligned_cols=229  Identities=22%  Similarity=0.247  Sum_probs=186.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++..|+++||||+++||++++++|+++|++|++++|+.+...+..+.+     ++.++.+|+++.+++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999998876665554332     356778999999999999999999899


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|++|||||... ..+..+.+.+++++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.++...|+++|+
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         87 EIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             CCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHHH
Confidence            9999999999763 35667888999999999999999999999999998754 689999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++.++||++++++||+++|++........      .......... ......+++.+|+|+|+++++++
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~dva~a~~~~~  237 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEV------IGPMLEDWAK-WGQARHDYFLRASDLARAITFVA  237 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhh------hhHHHHHHHH-hcccccccccCHHHHHHHHHHHh
Confidence            9999999999999988999999999999988643211000      0000111111 01112356899999999999999


Q ss_pred             cCC
Q 023708          249 SEE  251 (278)
Q Consensus       249 s~~  251 (278)
                      +..
T Consensus       238 ~~~  240 (274)
T PRK07775        238 ETP  240 (274)
T ss_pred             cCC
Confidence            754

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-33  Score=238.61  Aligned_cols=221  Identities=25%  Similarity=0.413  Sum_probs=185.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.+.+     ++.++.+|++++++++++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999887766554432     3567899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.++...|+++|+++++
T Consensus        81 lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            999999863 35678889999999999999999999999999998754 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ++++++.|+.+.||+++.|+||+++|++.......       .+. ........   ..+...+|+|+|+.++..+...
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~~~-~~~~~~~~---~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP-------NPA-MKAQVGKL---LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccC-------chh-HHHHHHHH---hhcCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999976542210       111 11111111   1133579999999999998654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=9.1e-33  Score=242.51  Aligned_cols=238  Identities=16%  Similarity=0.102  Sum_probs=183.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++     .+.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999999887776665543     356789999999999999999888778


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-CcEEEEecCchhhc------------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-KGSIICTSSSAAIM------------  155 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~------------  155 (278)
                      ++|+||||||+.....+..+.+.++|+..+++|+.+++.+++.++|.|.+.+. .++||++||.....            
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            89999999997643333456788999999999999999999999999987542 36999999976432            


Q ss_pred             -----------------------CCCCCchhhhhHHHHHHHHHHHHHHHC-CCCcEEEEecCCCC-CChhhHHHHHhhhc
Q 023708          156 -----------------------GGLASHAYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGV-PSEMLVNAYRKYLG  210 (278)
Q Consensus       156 -----------------------~~~~~~~Y~~sK~a~~~l~~~l~~e~~-~~~i~v~~v~pG~v-~t~~~~~~~~~~~~  210 (278)
                                             +..+..+|+.||++.+.+++.+++++. .+||++++++||.+ .|++.+....    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~----  238 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPP----  238 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCH----
Confidence                                   112345799999999999999999995 46899999999999 5776533110    


Q ss_pred             cCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEee
Q 023708          211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~  262 (278)
                          ........+...   ......++++.++.+++++.+.....+|..|..
T Consensus       239 ----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~  283 (322)
T PRK07453        239 ----LFQKLFPWFQKN---ITGGYVSQELAGERVAQVVADPEFAQSGVHWSW  283 (322)
T ss_pred             ----HHHHHHHHHHHH---HhhceecHHHHhhHHHHhhcCcccCCCCceeec
Confidence                000011111110   113356888889899888865554568888863

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=236.57  Aligned_cols=230  Identities=21%  Similarity=0.248  Sum_probs=184.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+ .++.++.+|+++.++++++++++.+.++++|+|||||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            789999999999999999999999999999998877666543 2567889999999999999999999999999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST  177 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  177 (278)
                      |.. ..+++.+.+.+++++.+++|+.+++.++++++|.|.+.  .+++|++||..+..+.+....|+++|++++.+++++
T Consensus        81 g~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l  157 (274)
T PRK05693         81 GYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDAL  157 (274)
T ss_pred             CCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence            975 44577888999999999999999999999999999753  479999999999988888899999999999999999


Q ss_pred             HHHHCCCCcEEEEecCCCCCChhhHHHHHhh--hccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKY--LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       178 ~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +.|++++||+|+.|+||.++|++........  ......+....................+|+++|+.++..+...
T Consensus       158 ~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        158 RLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             HHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999765421100  0000011111111111110001133468999999999988643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=2.4e-32  Score=229.34  Aligned_cols=232  Identities=32%  Similarity=0.491  Sum_probs=194.7

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +||||++++||.+++++|+++|++|++++|.. +......+.+     +++++.+|++|.++++++++++.+.++++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998864 3333332222     25688999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.+.+.+ .+++|++||..+..+.+++..|+++|++++.+
T Consensus        81 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRD-NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999997633 4567788899999999999999999999999987644 67999999999988889999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      ++.++.++...|++++.++||.++|++....          .+........   ..+.+++.+++|+++++++++.+...
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~~  225 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKL----------SEKVKKKILS---QIPLGRFGTPEEVANAVAFLASDEAS  225 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhc----------ChHHHHHHHh---cCCcCCCcCHHHHHHHHHHHhCcccC
Confidence            9999999988899999999999998865321          1111111222   22457889999999999999988778


Q ss_pred             CceeeEEeecCCc
Q 023708          254 FITAHNLVIDGGY  266 (278)
Q Consensus       254 ~~tG~~i~~dgG~  266 (278)
                      +++|+.+++|+|+
T Consensus       226 ~~~g~~~~~~~g~  238 (239)
T TIGR01830       226 YITGQVIHVDGGM  238 (239)
T ss_pred             CcCCCEEEeCCCc
Confidence            8999999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=234.32  Aligned_cols=216  Identities=33%  Similarity=0.397  Sum_probs=184.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhh-cCCccEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSW-KGQLDIM   93 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~-~g~id~l   93 (278)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+..   .+.++.+|+++.+++.++++++.+. ++++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            78999999999999999999999999999999988877776543   3678899999999999999988776 7899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||... ..++.+.+.+++++.+++|+.+++.+++++.+.|...+ .++||++||..+..+.++...|+.||++++.+
T Consensus        82 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         82 FNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            99999864 35678889999999999999999999999999998755 68999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +++++.++.+++|+++.|.||.++|++.....          .+........     .+...+|+|+++++++++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~----------~~~~~~~~~~-----~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTS----------NEVDAGSTKR-----LGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCccccccc----------chhhhhhHhh-----ccCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999765310          0001111111     12346899999999999853

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-33  Score=227.53  Aligned_cols=197  Identities=18%  Similarity=0.193  Sum_probs=171.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +++||||++|||+++++.|+++ ++|++++|+..            .+.+|+++.+++++++++    ++++|+||||||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag   64 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEK----VGKVDAVVSAAG   64 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHh----cCCCCEEEECCC
Confidence            6999999999999999999999 99999998753            468999999999998875    478999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      .. ...++.+.+.++|++.+++|+.+++++++.+.|.|.+   .++|+++||..+..+.++...|+++|+++++|+++++
T Consensus        65 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la  140 (199)
T PRK07578         65 KV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAA  140 (199)
T ss_pred             CC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            75 4467888999999999999999999999999999975   4799999999999999999999999999999999999


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAH  258 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~  258 (278)
                      .|+ ++||+++.|+||+++|++....                ..+      +..+..+|+|+|+.++++++.   +.+|+
T Consensus       141 ~e~-~~gi~v~~i~Pg~v~t~~~~~~----------------~~~------~~~~~~~~~~~a~~~~~~~~~---~~~g~  194 (199)
T PRK07578        141 LEL-PRGIRINVVSPTVLTESLEKYG----------------PFF------PGFEPVPAARVALAYVRSVEG---AQTGE  194 (199)
T ss_pred             HHc-cCCeEEEEEcCCcccCchhhhh----------------hcC------CCCCCCCHHHHHHHHHHHhcc---ceeeE
Confidence            999 8899999999999998863210                000      223467999999999999863   58999


Q ss_pred             EEee
Q 023708          259 NLVI  262 (278)
Q Consensus       259 ~i~~  262 (278)
                      .|.+
T Consensus       195 ~~~~  198 (199)
T PRK07578        195 VYKV  198 (199)
T ss_pred             Eecc
Confidence            8875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-32  Score=230.37  Aligned_cols=217  Identities=33%  Similarity=0.420  Sum_probs=186.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++++++||||+++||++++++|+++|++|++++|+.+..++..+.+     ++.++.+|+++.+++.++++++.+++
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999999876655543322     35678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.+.+++ .+++|++||..+..+.++...|+.+|
T Consensus        83 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         83 GSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             CCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHHHH
Confidence            9999999999976 335677889999999999999999999999999998755 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.++.++||+++.|+||.+.|++......        .         ..   ...+..+|+|+|+.++.+
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~--------~---------~~---~~~~~~~~~~~a~~~~~~  220 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL--------T---------DG---NPDKVMQPEDLAEFIVAQ  220 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc--------c---------cc---CCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999997643210        0         00   013467999999999999


Q ss_pred             ccCC
Q 023708          248 ASEE  251 (278)
Q Consensus       248 ~s~~  251 (278)
                      ++..
T Consensus       221 l~~~  224 (239)
T PRK07666        221 LKLN  224 (239)
T ss_pred             HhCC
Confidence            9755

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-32  Score=229.61  Aligned_cols=231  Identities=23%  Similarity=0.323  Sum_probs=192.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++|+++||||+++||.++++.|+++|++|++++|+++..+++.+..    ++.++.+|+++.++++++++++...+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            478899999999999999999999999999999999887776654332    3678899999999999999999888899


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSKE  168 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~  168 (278)
                      +|.+|+|+|.... .+..+  .+++++.+++|+.+++.+++.++|.+.+   .+++|++||..+. .+.+....|+++|+
T Consensus        82 id~ii~~ag~~~~-~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         82 IDGLVVTVGGYVE-DTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCEEEEcCCCcCC-CchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            9999999986532 23332  3889999999999999999999999865   4789999998774 35667778999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++...+|+++.|+||++.|++....             .... ...    ...+..+++|+++.+++++
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-------------~~~~-~~~----~~~~~~~~~~va~~~~~~~  217 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-------------NWKK-LRK----LGDDMAPPEDFAKVIIWLL  217 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-------------hhhh-hcc----ccCCCCCHHHHHHHHHHHh
Confidence            999999999999998899999999999998863210             0000 111    1134679999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...+.+|+.+.+|||..+
T Consensus       218 ~~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        218 TDEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             cccccCccCCEEEECCcccc
Confidence            98888999999999999765

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=232.49  Aligned_cols=226  Identities=19%  Similarity=0.183  Sum_probs=178.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHH-HHhhc---CCccEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRL-AVSWK---GQLDIM   93 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~---g~id~l   93 (278)
                      +++|||||++|||++++++|+++|++|++++|+.+.........++.++.+|+++.+++++++++ +.+.+   +++|++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            46999999999999999999999999999998754321111112356789999999999998877 55544   479999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||......++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+++..|+++|++++++
T Consensus        82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (243)
T PRK07023         82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATKAALDHH  160 (243)
T ss_pred             EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence            99999875556778889999999999999999999999999998754 68999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH-HHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ-AALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~-~~~~l~s~~~  252 (278)
                      ++.++.+ .+.||+++.|+||+++|++..... ... ..  .......+..   ..+.++...|+|+|+ .+.+|+++.-
T Consensus       161 ~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~-~~~-~~--~~~~~~~~~~---~~~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        161 ARAVALD-ANRALRIVSLAPGVVDTGMQATIR-ATD-EE--RFPMRERFRE---LKASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             HHHHHhc-CCCCcEEEEecCCccccHHHHHHH-hcc-cc--cchHHHHHHH---hhhcCCCCCHHHHHHHHHHHHhcccc
Confidence            9999999 778999999999999999865421 100 00  0111111111   124578999999999 5667776553

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-32  Score=232.75  Aligned_cols=242  Identities=19%  Similarity=0.222  Sum_probs=191.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|++|||||++|||++++++|+++|++|++++|+.+....+.+..  ++.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            478999999999999999999999999999999987776665432  367889999999999999999999889999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||... ..+..+.+.+++++.+++|+.+++.++++++|.|++.+ .+++|++||..+..+.++...|++||++++.++
T Consensus        82 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  159 (276)
T PRK06482         82 SNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFV  159 (276)
T ss_pred             ECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHHHHHHHHH
Confidence            9999864 35677888999999999999999999999999998754 689999999998888888999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhh-hc-cCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY-LG-KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      ++++.++.++||+++.++||.+.|++........ .. ........+.......   +..-..+|+|++++++..+... 
T Consensus       160 ~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~a~~~~~~~~-  235 (276)
T PRK06482        160 EAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG---SFAIPGDPQKMVQAMIASADQT-  235 (276)
T ss_pred             HHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc---cCCCCCCHHHHHHHHHHHHcCC-
Confidence            9999999989999999999999888753321100 00 0011111222222221   1122478999999999998644 


Q ss_pred             CCceeeEEeecCCc
Q 023708          253 GFITAHNLVIDGGY  266 (278)
Q Consensus       253 ~~~tG~~i~~dgG~  266 (278)
                        ..+..+++.+|.
T Consensus       236 --~~~~~~~~g~~~  247 (276)
T PRK06482        236 --PAPRRLTLGSDA  247 (276)
T ss_pred             --CCCeEEecChHH
Confidence              223446665554

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-32  Score=228.16  Aligned_cols=209  Identities=24%  Similarity=0.251  Sum_probs=180.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+       .+.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999887766654322       3567899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC-CchhhhhHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA-SHAYSLSKE  168 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~~sK~  168 (278)
                      +|++|||||+.. ..++.+.+.+.+++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.++ ...|+.||+
T Consensus        82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHHH
Confidence            999999999863 35667788899999999999999999999999998755 679999999998888775 678999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.++.++...+|+++.|+||+++|++.....                        ......+|+|.++.++..+
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~------------------------~~~~~~~~~~~a~~i~~~~  215 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK------------------------STPFMVDTETGVKALVKAI  215 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc------------------------cCCccCCHHHHHHHHHHHH
Confidence            9999999999999988999999999999999764311                        0022568999999998888


Q ss_pred             cCC
Q 023708          249 SEE  251 (278)
Q Consensus       249 s~~  251 (278)
                      ...
T Consensus       216 ~~~  218 (248)
T PRK08251        216 EKE  218 (248)
T ss_pred             hcC
Confidence            654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-33  Score=222.27  Aligned_cols=185  Identities=31%  Similarity=0.332  Sum_probs=171.1

Q ss_pred             CCcEEEEeCC-CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh-hcCCccEE
Q 023708           16 TGKVAVITGG-ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS-WKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGa-s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~g~id~l   93 (278)
                      +.|++||||+ +||||.+++++|++.|+.|++++|..+....+..+.+.....+|+++++++..+..++++ .+|++|+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            4588999997 579999999999999999999999999988888778888999999999999999999998 78999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      +||||..+. .|..+.+.++.++.|++|++|..++++++...+.+.  +|.||+++|+.++.|+|....|.+||+|+.++
T Consensus        86 ~NNAG~~C~-~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfpf~~iYsAsKAAihay  162 (289)
T KOG1209|consen   86 YNNAGQSCT-FPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFPFGSIYSASKAAIHAY  162 (289)
T ss_pred             EcCCCCCcc-cccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccchhhhhhHHHHHHHHh
Confidence            999998744 578899999999999999999999999999776653  68999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHH
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVN  203 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~  203 (278)
                      ++.|+.|+++.||+|..+.||.+.|.+...
T Consensus       163 ~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  163 ARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hhhcEEeeeccccEEEEecccceecccccC
Confidence            999999999999999999999999987654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-32  Score=235.82  Aligned_cols=231  Identities=26%  Similarity=0.250  Sum_probs=184.5

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------GRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ....++.+++++||||++|||+++|++|+++|++|++.+|+.+..++..+.+.       +.++++|+++.+++.++.++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            34567889999999999999999999999999999999999877777665543       56789999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-------
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-------  155 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-------  155 (278)
                      +...++++|+||||||+....   ...+.|.++..|.+|.+|+|.+++.++|.|++.. .+|||++||.....       
T Consensus       108 ~~~~~~~ldvLInNAGV~~~~---~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  108 FKKKEGPLDVLINNAGVMAPP---FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHhcCCCccEEEeCcccccCC---cccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhc
Confidence            999999999999999997553   2677789999999999999999999999999866 48999999987511       


Q ss_pred             ----C--CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC
Q 023708          156 ----G--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL  229 (278)
Q Consensus       156 ----~--~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (278)
                          .  +.....|+.||.++..+++.|++.+.+ ||.+++++||.+.|+...+..           .-...+...... 
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~-----------~~~~~l~~~l~~-  250 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVN-----------LLLRLLAKKLSW-  250 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecch-----------HHHHHHHHHHHH-
Confidence                0  222335999999999999999999987 999999999999999433310           011111111100 


Q ss_pred             CCCCCCCHHHHHHHHHHhcc-CCCCCceeeE
Q 023708          230 LRGRSASIEDVAQAALFLAS-EEAGFITAHN  259 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s-~~~~~~tG~~  259 (278)
                        ...-++++-|+..++++. ++-...+|..
T Consensus       251 --~~~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  251 --PLTKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             --HhccCHHHHhhheehhccCccccCccccc
Confidence              112479999999999985 4445566655

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=228.38  Aligned_cols=220  Identities=29%  Similarity=0.386  Sum_probs=184.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|||||++|||+++++.|+++|++|++++|+.+..+++.+.+     ++.++.+|++|.++++++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999876665554332     256788999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           92 IMFNNAGISGSGGSITSL-NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      ++|||+|... ..++.+. +.+++++.+++|+.+++.+++.+++.|.+.  .+++|++||..+..+.++...|+++|+++
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            9999999763 3566777 889999999999999999999999998753  47999999999998998999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.+++.++.++.+++++++.+.||.+.|++........    + .+      .. ..+....++.+|+|+|++++++++.
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~----~-~~------~~-~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGD----G-KP------LG-KSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccc----c-cc------cc-cccccccCCCCHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999876432110    0 00      00 0111124688999999999999975


Q ss_pred             C
Q 023708          251 E  251 (278)
Q Consensus       251 ~  251 (278)
                      .
T Consensus       226 ~  226 (263)
T PRK06181        226 R  226 (263)
T ss_pred             C
Confidence            4

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=7.4e-32  Score=225.52  Aligned_cols=188  Identities=29%  Similarity=0.324  Sum_probs=172.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhhcC-
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSWKG-   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~g-   88 (278)
                      ..+.+|.|+|||+.+|+|+.+|+.|.++|++|++.+.+++..+.+..+.   +...++.|++++++++++.+.+.++.+ 
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            4567899999999999999999999999999999888877777776554   356789999999999999999998653 


Q ss_pred             -CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 -QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                       ++-.||||||+....++.+-.+.+++++.+++|++|++.++++++|.++++  .||||++||..+..+.|...+|++||
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~~~p~~g~Y~~SK  182 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRVALPALGPYCVSK  182 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCccCcccccchhhH
Confidence             589999999988888888889999999999999999999999999999885  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV  202 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~  202 (278)
                      +|++.|+.++++|+.+.||+|..|.||.+.|++..
T Consensus       183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  183 FAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99999999999999999999999999999999874

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=7.6e-32  Score=214.86  Aligned_cols=221  Identities=25%  Similarity=0.255  Sum_probs=182.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEE-ecchHH-HHHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhh--
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIA-DILDEL-GAALAS----TIGGRYIHCDVTKEEDVESAVRLAVSW--   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~-~r~~~~-~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~--   86 (278)
                      ..|.++||||++|||..++++|.+. |..+++. +|+.+. .+++..    .-+++.+++|+++.++++++++++.+.  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            4466999999999999999999975 6666654 555665 333333    234889999999999999999999987  


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC----------CcEEEEecCchhhcC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR----------KGSIICTSSSAAIMG  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----------~~~iv~vsS~~~~~~  156 (278)
                      ..++|+||||||+...-....+.+.+.|.+.+++|+.++..++|+|+|++.+...          ...|||+||..+-.+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            4579999999999866666777888999999999999999999999999987441          137999999877543


Q ss_pred             C---CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCC
Q 023708          157 G---LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR  233 (278)
Q Consensus       157 ~---~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
                      .   .++.+|.+||+|+++++|+++.|+.+.+|-|..+|||+|.|+|-..                            ..
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~----------------------------~a  213 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK----------------------------KA  213 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC----------------------------Cc
Confidence            2   3467999999999999999999999999999999999999998642                            23


Q ss_pred             CCCHHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          234 SASIEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       234 ~~~~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ..+|||.+..++.....-...-+|-.|+.||
T Consensus       214 ~ltveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  214 ALTVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             ccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence            5688888888888777666677888888876

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=223.13  Aligned_cols=207  Identities=21%  Similarity=0.181  Sum_probs=177.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |+++||||++|||++++++|+++|++|++++|+++..+...+.+      ++.++++|++++++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999887666554332      367889999999999999988764   479


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||+|.... .+..+.+.+++.+.+++|+.+++++++++.|.|.+++ .+++|++||..+..+.++...|+++|++++
T Consensus        79 ~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         79 IVLIAVGTLGD-QAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             EEEECCcCCCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            99999997643 4667888999999999999999999999999998755 689999999999888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++++++.|+.+.||+++.|+||.++|++....          .             .+.....+|+|+++.++.+++..
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~----------~-------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL----------K-------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhcc----------C-------------CCccccCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999865321          0             01234678999999999999755


Q ss_pred             C
Q 023708          252 A  252 (278)
Q Consensus       252 ~  252 (278)
                      .
T Consensus       214 ~  214 (243)
T PRK07102        214 K  214 (243)
T ss_pred             C
Confidence            3

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=229.74  Aligned_cols=204  Identities=30%  Similarity=0.427  Sum_probs=167.4

Q ss_pred             HHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHH
Q 023708           33 TAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNME  112 (278)
Q Consensus        33 ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~  112 (278)
                      +|++|+++|++|++++|+++... .     ..++++|++|.++++++++++.   +++|+||||||....         +
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-~-----~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~---------~   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-L-----DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT---------A   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-h-----hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC---------C
Confidence            47899999999999999876532 1     2367899999999999998764   689999999997521         3


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc---------------------------CCCCCchhhh
Q 023708          113 DVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM---------------------------GGLASHAYSL  165 (278)
Q Consensus       113 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~---------------------------~~~~~~~Y~~  165 (278)
                      ++++.+++|+.+++.+++.++|.|.+   .|+||++||..++.                           +.++...|++
T Consensus        63 ~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  139 (241)
T PRK12428         63 PVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQL  139 (241)
T ss_pred             CHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHH
Confidence            57899999999999999999999854   47999999998863                           5567789999


Q ss_pred             hHHHHHHHHHHHH-HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          166 SKEAIIGLARSTA-CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       166 sK~a~~~l~~~l~-~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ||++++++++.++ .|++++||+||+|+||.+.|++.......      .......    . ...|.+|+.+|||+|+++
T Consensus       140 sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~------~~~~~~~----~-~~~~~~~~~~pe~va~~~  208 (241)
T PRK12428        140 SKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM------LGQERVD----S-DAKRMGRPATADEQAAVL  208 (241)
T ss_pred             HHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh------hhhHhhh----h-cccccCCCCCHHHHHHHH
Confidence            9999999999999 99999999999999999999986542210      0011111    1 112568899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...+++|+.+.+|||+..
T Consensus       209 ~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        209 VFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             HHHcChhhcCccCcEEEecCchHH
Confidence            999998889999999999999764

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-31  Score=252.22  Aligned_cols=216  Identities=27%  Similarity=0.290  Sum_probs=182.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.+.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            45788999999999999999999999999999999999987776665443     3667899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSL--NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +|++|++|||||.... .++.+.  +.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+
T Consensus       446 ~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  523 (657)
T PRK07201        446 HGHVDYLVNNAGRSIR-RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYV  523 (657)
T ss_pred             cCCCCEEEECCCCCCC-CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHH
Confidence            9999999999997532 233322  2588999999999999999999999998765 68999999999999889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++++++++.|++++||+++.|+||.++|++.....         .       .      ......+||++|+.+
T Consensus       524 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~---------~-------~------~~~~~~~~~~~a~~i  581 (657)
T PRK07201        524 ASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK---------R-------Y------NNVPTISPEEAADMV  581 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc---------c-------c------cCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999864210         0       0      002246888999988


Q ss_pred             HHhccCC
Q 023708          245 LFLASEE  251 (278)
Q Consensus       245 ~~l~s~~  251 (278)
                      +..+...
T Consensus       582 ~~~~~~~  588 (657)
T PRK07201        582 VRAIVEK  588 (657)
T ss_pred             HHHHHhC
Confidence            8876433

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-30  Score=217.27  Aligned_cols=221  Identities=29%  Similarity=0.357  Sum_probs=187.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +.+++++||||+++||++++++|+++|++|++++|+.+...++.+.+    +++++.+|+++.+++.++++++.+.++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            56799999999999999999999999999999999887666655443    36788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||+|.. ...++.+.+.+++++.+++|+.+++.+++++++.+.+ + .+++|++||..+..+.++...|+.+|+++
T Consensus        84 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a~  160 (237)
T PRK07326         84 DVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-GGYIINISSLAGTNFFAGGAAYNASKFGL  160 (237)
T ss_pred             CEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-CeEEEEECChhhccCCCCCchHHHHHHHH
Confidence            9999999976 3456778899999999999999999999999999843 3 57999999999888888888999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +++++.++.++...|++++.|+||.+.|++....          .+..            .....+++|+++.++++++.
T Consensus       161 ~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~----------~~~~------------~~~~~~~~d~a~~~~~~l~~  218 (237)
T PRK07326        161 VGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT----------PSEK------------DAWKIQPEDIAQLVLDLLKM  218 (237)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeccccCcccccc----------cchh------------hhccCCHHHHHHHHHHHHhC
Confidence            9999999999998999999999999988764321          0100            01136899999999999987


Q ss_pred             CCCCceeeEE
Q 023708          251 EAGFITAHNL  260 (278)
Q Consensus       251 ~~~~~tG~~i  260 (278)
                      +...+.++..
T Consensus       219 ~~~~~~~~~~  228 (237)
T PRK07326        219 PPRTLPSKIE  228 (237)
T ss_pred             CccccccceE
Confidence            7666555444

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=219.48  Aligned_cols=204  Identities=19%  Similarity=0.159  Sum_probs=172.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++++||||++|||++++++|+++|++|++++|+++..+++.+.. ++.++.+|+++.++++++++++..   .+|.+|||
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEc
Confidence            78999999999999999999999999999999988777665432 467889999999999999887642   47999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS  176 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~  176 (278)
                      ||.... .+..+.+.++|++.+++|+.+++++++.++|.|.+   .+++|++||..+..+.++...|+++|++++++++.
T Consensus        79 ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  154 (240)
T PRK06101         79 AGDCEY-MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALPRAEAYGASKAAVAYFART  154 (240)
T ss_pred             Cccccc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHH
Confidence            986422 23456788999999999999999999999999964   46899999999999999999999999999999999


Q ss_pred             HHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       177 l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ++.|+.++||+++.+.||.+.|++.....                    .   ......+|+|+|+.++..+...
T Consensus       155 l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--------------------~---~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        155 LQLDLRPKGIEVVTVFPGFVATPLTDKNT--------------------F---AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHhcCceEEEEeCCcCCCCCcCCCC--------------------C---CCCcccCHHHHHHHHHHHHhcC
Confidence            99999999999999999999998753210                    0   0112468999999998877544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.8e-31  Score=220.07  Aligned_cols=216  Identities=20%  Similarity=0.235  Sum_probs=173.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.+..++.++.+|++|.++++++++++.+  +++|+|||||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcC
Confidence            78999999999999999999999999999999876665554444577889999999999999998754  4799999999


Q ss_pred             ccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---CCCchhhhhHHHHHHH
Q 023708           98 GISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---LASHAYSLSKEAIIGL  173 (278)
Q Consensus        98 g~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~Y~~sK~a~~~l  173 (278)
                      |+... ..++.+.+.+++++.+++|+.+++.+++.+++.+.+.  .++++++||..+..+.   ..+..|+++|++++.+
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~  157 (225)
T PRK08177         80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSM  157 (225)
T ss_pred             cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHHHHHHHHH
Confidence            98643 3456788899999999999999999999999998753  4789999997765432   3567899999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      ++.++.|++++||+++.|+||+++|++....                           . ..++++.+..++.++.....
T Consensus       158 ~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~---------------------------~-~~~~~~~~~~~~~~~~~~~~  209 (225)
T PRK08177        158 TRSFVAELGEPTLTVLSMHPGWVKTDMGGDN---------------------------A-PLDVETSVKGLVEQIEAASG  209 (225)
T ss_pred             HHHHHHHhhcCCeEEEEEcCCceecCCCCCC---------------------------C-CCCHHHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999974210                           0 13567777777777654433


Q ss_pred             CceeeEEeecCC
Q 023708          254 FITAHNLVIDGG  265 (278)
Q Consensus       254 ~~tG~~i~~dgG  265 (278)
                      ...+..+.++|+
T Consensus       210 ~~~~~~~~~~~~  221 (225)
T PRK08177        210 KGGHRFIDYQGE  221 (225)
T ss_pred             cCCCceeCcCCc
Confidence            333444555544

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-30  Score=218.17  Aligned_cols=203  Identities=20%  Similarity=0.173  Sum_probs=155.3

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ||+...+++|+++||||++|||++++++|+++|++|++++|+.....+........++.+|+++.+++++       .++
T Consensus         6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------~~~   78 (245)
T PRK12367          6 PMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-------QLA   78 (245)
T ss_pred             hhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-------hcC
Confidence            5666788999999999999999999999999999999999876222111111123568899999987764       346


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchhhhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++|+||||||..    +..+.+.++|++.+++|+.+++++++.++|.|.+++  +.+.+++.+|.++..+ +....|++|
T Consensus        79 ~iDilVnnAG~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aS  153 (245)
T PRK12367         79 SLDVLILNHGIN----PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEIS  153 (245)
T ss_pred             CCCEEEECCccC----CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHH
Confidence            899999999974    224567899999999999999999999999997631  1234445556555444 456789999


Q ss_pred             HHHHHHHH---HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLA---RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~---~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |+++..+.   +.++.|+.+.+++++.+.||+++|++..                             .+..+|+|+|+.
T Consensus       154 Kaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------------------------~~~~~~~~vA~~  204 (245)
T PRK12367        154 KRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------------------------IGIMSADFVAKQ  204 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------------------------cCCCCHHHHHHH
Confidence            99986544   4555566788999999999999887520                             124689999999


Q ss_pred             HHHhccCCC
Q 023708          244 ALFLASEEA  252 (278)
Q Consensus       244 ~~~l~s~~~  252 (278)
                      +++.++...
T Consensus       205 i~~~~~~~~  213 (245)
T PRK12367        205 ILDQANLGL  213 (245)
T ss_pred             HHHHHhcCC
Confidence            999996543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=4.2e-30  Score=215.95  Aligned_cols=183  Identities=25%  Similarity=0.288  Sum_probs=162.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++.+++++||||+++||++++++|+++|+ +|++++|+.+...+  ...++.++.+|+++.++++++++.    ++++|
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----~~~id   75 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEA----ASDVT   75 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHh----cCCCC
Confidence            346789999999999999999999999999 99999998766544  223467889999999998887764    46899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++|||+|......++.+.+.+++++.+++|+.+++.+++++.+.+.+.+ .+++|++||..+..+.++...|+.+|++++
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~  154 (238)
T PRK08264         76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKAAAW  154 (238)
T ss_pred             EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHHHHHHH
Confidence            9999999854556788899999999999999999999999999998755 689999999999998899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhH
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLV  202 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~  202 (278)
                      .+++.++.++.+.|++++.+.||.++|++..
T Consensus       155 ~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~  185 (238)
T PRK08264        155 SLTQALRAELAPQGTRVLGVHPGPIDTDMAA  185 (238)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence            9999999999989999999999999998743

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.8e-30  Score=216.69  Aligned_cols=217  Identities=29%  Similarity=0.319  Sum_probs=191.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +.++|||+|+|||+++|.++.++|++|.++.|+.+++.++.+.++       +.+..+|+.|.+++..+++++.+..+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            689999999999999999999999999999999999888877654       4477899999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |.+|||||.. ..+.+.+.+.++++..+++|++++++++++.++.|.+..+.|+|+.+||..+..+..+.++|+++|+|+
T Consensus       114 d~l~~cAG~~-v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVA-VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCcc-cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            9999999986 557899999999999999999999999999999999877678999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      .+|+..+++|+.++||+|....|+.+.||.+++..       ...|+........      ....++||+|.+++.=+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En-------~tkP~~t~ii~g~------ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN-------KTKPEETKIIEGG------SSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc-------ccCchheeeecCC------CCCcCHHHHHHHHHhHH
Confidence            99999999999999999999999999999876532       1234443332222      34578999999988655

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.8e-29  Score=214.24  Aligned_cols=225  Identities=24%  Similarity=0.260  Sum_probs=184.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-CCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-GQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id~li~n   96 (278)
                      |+++||||+++||+++++.|+++|++|++++|+.+..+.+.+ .++.++.+|++|.+++.++++.+.... +++|.+|||
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            789999999999999999999999999999998877665543 357789999999999999999887754 689999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS  176 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~  176 (278)
                      +|... ..++.+.+.+++++.+++|+.+++.+++.+++.+.+.+ .+++|++||..+..+.++...|+++|++++.++++
T Consensus        82 ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~  159 (256)
T PRK08017         82 AGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA  159 (256)
T ss_pred             CCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHH
Confidence            99753 35777889999999999999999999999999998755 57999999999888888899999999999999999


Q ss_pred             HHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCce
Q 023708          177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFIT  256 (278)
Q Consensus       177 l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~t  256 (278)
                      ++.++.+.+++++.+.||.+.|++.........   . .+.. .....      .+.+.+|+|+++.+..+++.....++
T Consensus       160 l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~-~~~~-~~~~~------~~~~~~~~d~a~~~~~~~~~~~~~~~  228 (256)
T PRK08017        160 LRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQS---D-KPVE-NPGIA------ARFTLGPEAVVPKLRHALESPKPKLR  228 (256)
T ss_pred             HHHHHhhcCCEEEEEeCCCcccchhhcccchhh---c-cchh-hhHHH------hhcCCCHHHHHHHHHHHHhCCCCCce
Confidence            999999999999999999999987654321100   0 0000 00000      12357999999999999976654433

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=213.17  Aligned_cols=223  Identities=23%  Similarity=0.276  Sum_probs=175.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|||||++|||+++++.|+++|++|++++|+.+...++.+..     ++.++.+|++|.+++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            578999999999999999999999999999999876665544322     36788899999998887654      3799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||... ..++.+.+.++++..+++|+.+++.+++.+++.+.+.+ .++||++||..+..+.++...|++||++++
T Consensus        76 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            9999999863 45788899999999999999999999999999998765 589999999999888888889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.++.+.||+++.|+||++.|++............. ..........  ...+ ....+++|+++.+..++..+
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYD-PARNFTDPED--LAFP-LEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcc-hhhHHHhhhh--hhcc-ccCCCHHHHHHHHHHHhcCC
Confidence            999999999998999999999999999875433221111000 0000000000  0112 23468999999988877543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=3.5e-30  Score=204.79  Aligned_cols=158  Identities=34%  Similarity=0.485  Sum_probs=143.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc--hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-HIVIADIL--DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~--~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      |++|||||++|||++++++|+++|. .|++++|+  .+...++..++     ++.++++|+++.++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 77888988  55566554433     3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|++|||+|... ..++.+.+.++|++.+++|+.+++.+.++++|    ++ .++||++||..+..+.+++..|+++|+|
T Consensus        81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhccCCCCChhHHHHHHH
Confidence            999999999986 67899999999999999999999999999999    23 7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 023708          170 IIGLARSTACEL  181 (278)
Q Consensus       170 ~~~l~~~l~~e~  181 (278)
                      +++|+++++.|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.2e-30  Score=206.50  Aligned_cols=239  Identities=21%  Similarity=0.165  Sum_probs=190.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe--cchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIAD--ILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~--r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+|++|+||+|.|||..++..+..++-.....+  |.....+.+.-...  ......|++...-+.++++..++..|+.|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            478899999999999999988888876544433  33222111111111  12234677777778888888888889999


Q ss_pred             EEEECCccCCCCCCcc--cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           92 IMFNNAGISGSGGSIT--SLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        92 ~li~nag~~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      ++|||||..++.....  ..+.++|++.++.|+++.+.+.+.++|.+++++-.+.+||+||.++..|+.+|.+||.+|+|
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaA  164 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAA  164 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHH
Confidence            9999999887766555  78889999999999999999999999999886435899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      .++|++.++.|-. .++++..+.||.++|+|....-+..    .+.|.....+..-..   .+++.+|...|+.+.+|+.
T Consensus       165 r~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~----~~~p~~l~~f~el~~---~~~ll~~~~~a~~l~~L~e  236 (253)
T KOG1204|consen  165 RNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS----RMTPADLKMFKELKE---SGQLLDPQVTAKVLAKLLE  236 (253)
T ss_pred             HHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc----CCCHHHHHHHHHHHh---cCCcCChhhHHHHHHHHHH
Confidence            9999999999976 7999999999999999998765322    456766654443322   3789999999999999996


Q ss_pred             CCCCCceeeEEeec
Q 023708          250 EEAGFITAHNLVID  263 (278)
Q Consensus       250 ~~~~~~tG~~i~~d  263 (278)
                      ... ..+|+++...
T Consensus       237 ~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  237 KGD-FVSGQHVDYY  249 (253)
T ss_pred             hcC-cccccccccc
Confidence            554 8999988654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.9e-29  Score=205.94  Aligned_cols=214  Identities=18%  Similarity=0.197  Sum_probs=177.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++.. .++.++.+|+++.++++++++++..  +++|++|||+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDG--EALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECC
Confidence            689999999999999999999999999999998776665543 3566889999999999998877643  4799999999


Q ss_pred             ccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC---chhhhhHHHHHHH
Q 023708           98 GISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS---HAYSLSKEAIIGL  173 (278)
Q Consensus        98 g~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---~~Y~~sK~a~~~l  173 (278)
                      |.... ..+..+.+.++|++.+++|+.+++.+++++.|.|.+.  .+++|+++|..+..+....   ..|+++|++++.+
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~  156 (222)
T PRK06953         79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDA  156 (222)
T ss_pred             CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHhHHHHHHH
Confidence            97632 3456677899999999999999999999999988653  5789999998776553322   2599999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      ++.++.++.  +++++.|+||+++|++...                            .....+++.++.++.++.....
T Consensus       157 ~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~  206 (222)
T PRK06953        157 LRAASLQAR--HATCIALHPGWVRTDMGGA----------------------------QAALDPAQSVAGMRRVIAQATR  206 (222)
T ss_pred             HHHHhhhcc--CcEEEEECCCeeecCCCCC----------------------------CCCCCHHHHHHHHHHHHHhcCc
Confidence            999998874  7999999999999997421                            1235789999999998777777


Q ss_pred             CceeeEEeecCCc
Q 023708          254 FITAHNLVIDGGY  266 (278)
Q Consensus       254 ~~tG~~i~~dgG~  266 (278)
                      ..+|..+.+|++.
T Consensus       207 ~~~~~~~~~~~~~  219 (222)
T PRK06953        207 RDNGRFFQYDGVE  219 (222)
T ss_pred             ccCceEEeeCCcC
Confidence            8899999988763

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=3.1e-30  Score=215.69  Aligned_cols=184  Identities=27%  Similarity=0.303  Sum_probs=162.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------CeEEEecCCCHHH-HHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYIHCDVTKEED-VESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~-i~~~~~~~~~~~g   88 (278)
                      .|++++||||+-|||++.|++|+++|.+|++++|++++++.+.+++.      ++++.+|+++.++ .+++.+.+..  .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--L  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence            35999999999999999999999999999999999999987766543      6788999998876 3333333222  2


Q ss_pred             CccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +|.+||||+|+.. .+.++.+.+.+.+++.+.+|+.+...+++.++|.|.+++ +|.||+++|.++..|.|.+..|+++|
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHHHHH
Confidence            6889999999874 356788888889999999999999999999999999866 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV  202 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~  202 (278)
                      +.++.|+++|..||..+||.|..+.|+.|-|+|..
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence            99999999999999999999999999999999875

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.7e-28  Score=199.92  Aligned_cols=218  Identities=25%  Similarity=0.314  Sum_probs=178.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|++|||||+++||++++++|+++ ++|++++|+.+..+++.+.. ++.++.+|++|.++++++++++    +++|+|||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL----GRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc----CCCCEEEE
Confidence            478999999999999999999999 99999999877666554333 4678999999999998887653    57999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      ++|... ..++.+.+.++|.+.+++|+.+++.+++.+++.+.++  .+++|++||..+..+.++...|+.+|++++.+++
T Consensus        78 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~  154 (227)
T PRK08219         78 NAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGWGSYAASKFALRALAD  154 (227)
T ss_pred             CCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHH
Confidence            999853 3566788899999999999999999999999998764  4799999999998888889999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCc
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  255 (278)
                      .++.++... ++++.+.||.+.++.........               .  ...+.+++.+++|++++++++++...   
T Consensus       155 ~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~dva~~~~~~l~~~~---  213 (227)
T PRK08219        155 ALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE---------------G--GEYDPERYLRPETVAKAVRFAVDAPP---  213 (227)
T ss_pred             HHHHHhcCC-ceEEEEecCCccchHhhhhhhhh---------------c--cccCCCCCCCHHHHHHHHHHHHcCCC---
Confidence            999988766 99999999999888654322100               0  01123568999999999999997543   


Q ss_pred             eeeEEeec
Q 023708          256 TAHNLVID  263 (278)
Q Consensus       256 tG~~i~~d  263 (278)
                      .|.+++++
T Consensus       214 ~~~~~~~~  221 (227)
T PRK08219        214 DAHITEVV  221 (227)
T ss_pred             CCccceEE
Confidence            34444444

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=4e-26  Score=203.83  Aligned_cols=196  Identities=21%  Similarity=0.142  Sum_probs=151.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST--IGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++|+++||||++|||++++++|+++|++|++++|+++...+....  .++..+.+|++|++++.+.+       +++|
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~ID  247 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKVD  247 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCCC
Confidence            56899999999999999999999999999999999987655433221  13557889999998876644       5899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC---CcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR---KGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|||||...    ..+.+.+++++.+++|+.+++.++++++|.|++++.   .+.+|++|+ +. ...+..+.|++||+
T Consensus       248 iLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKa  321 (406)
T PRK07424        248 ILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKR  321 (406)
T ss_pred             EEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHH
Confidence            9999999752    246788999999999999999999999999987542   234556554 33 33345568999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      |+..++. +.++.  .++.+..+.||++.|++..                             ....+||++|+.+++.+
T Consensus       322 Al~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------------------~~~~spe~vA~~il~~i  369 (406)
T PRK07424        322 ALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------------------------IGVMSADWVAKQILKLA  369 (406)
T ss_pred             HHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------------------------CCCCCHHHHHHHHHHHH
Confidence            9999984 44443  3677788899998877520                             12469999999999999


Q ss_pred             cCCCCC
Q 023708          249 SEEAGF  254 (278)
Q Consensus       249 s~~~~~  254 (278)
                      +.+..+
T Consensus       370 ~~~~~~  375 (406)
T PRK07424        370 KRDFRN  375 (406)
T ss_pred             HCCCCE
Confidence            776654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=1.5e-24  Score=226.23  Aligned_cols=178  Identities=19%  Similarity=0.213  Sum_probs=153.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecch--------------H----------------------------
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILD--------------E----------------------------   52 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~--------------~----------------------------   52 (278)
                      +++++|||||++|||.++|++|+++ |++|++++|+.              .                            
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999871              0                            


Q ss_pred             -----HHHHHHh---hh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHh
Q 023708           53 -----LGAALAS---TI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL  122 (278)
Q Consensus        53 -----~~~~~~~---~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~  122 (278)
                           ......+   ..  .+.++.||++|.++++++++++.+. ++||+||||||+. ..+++.+.+.++|++.|++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHH
Confidence                 0001111   11  2567899999999999999999887 6899999999987 446889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH
Q 023708          123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV  202 (278)
Q Consensus       123 ~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~  202 (278)
                      .|.+++++++.+.+     .++||++||..+..+.++...|+++|++++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2154 ~G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN-----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhC-----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999999887654     34799999999999999999999999999999999999885  599999999999998853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=1.9e-24  Score=174.97  Aligned_cols=189  Identities=20%  Similarity=0.216  Sum_probs=162.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-----eEEEEecchHHHHHHHhhhC---------CeEEEecCCCHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-----HIVIADILDELGAALASTIG---------GRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-----~Vi~~~r~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~~~~   81 (278)
                      ..|++||||+++|||.+||.+|++...     ++++++|+.++.+++.+.+.         +.++.+|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            468999999999999999999998753     46778999888888776543         6789999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCCCC-------------C-------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGG-------------S-------------ITSLNMEDVKFLLSVNLNGILHGIKHAAKA  135 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~-------------~-------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  135 (278)
                      ++.++|.++|.++.|||++..++             +             ...++.|++...|++|++|+|++++.+.|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999864433             1             124557888999999999999999999999


Q ss_pred             HHccCCCcEEEEecCchhhcC---------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHH
Q 023708          136 MIEGQRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY  205 (278)
Q Consensus       136 ~~~~~~~~~iv~vsS~~~~~~---------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~  205 (278)
                      +..+. ...+|++||..+...         ..+..+|..||.+.+-|.-++-+.+.+.|+..+.++||+..|.+....+
T Consensus       162 l~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  162 LCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            98765 459999999988643         4566789999999999999999999999999999999999998877654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=3.4e-23  Score=165.22  Aligned_cols=170  Identities=21%  Similarity=0.290  Sum_probs=141.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHH-------HHHh-hhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGA-------ALAS-TIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~-------~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |+++||||++|||.+++++|+++|+ .|++++|+++...       ++.+ ..++.++.+|++++++++++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 6777777643221       1111 11355788999999999999999998889


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|.+|||+|.. ...++.+.+.+++++.+++|+.+++.+++.+.+     .+.+++|++||..+..+.++...|+++|+
T Consensus        81 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTRD-----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhcc-----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            999999999976 335677889999999999999999999998843     22579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCC
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVP  197 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~  197 (278)
                      +++.+++.++.    .++++..+.||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999977643    48889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=7.6e-23  Score=187.25  Aligned_cols=215  Identities=15%  Similarity=0.171  Sum_probs=158.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------------CCeEEEecCCCHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------------GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------------~~~~~~~D~~~~~~i~~~~   80 (278)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.+....+.+.+              ++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46899999999999999999999999999999999887766544321              2568899999998876643


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLA  159 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~  159 (278)
                             +++|+||||+|....       ...++...+++|+.+..++++++.+.    + .++||++||..+. .+.+.
T Consensus       158 -------ggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        158 -------GNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             -------cCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhcccCccc
Confidence                   589999999986421       11357788999999999999887653    2 5799999998864 33332


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      . .|. +|+++..+.+.+..++...||+++.|+||++.+++....     ..     ..+.....   ..+.++.+.++|
T Consensus       219 ~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-----~t-----~~v~~~~~---d~~~gr~isreD  283 (576)
T PLN03209        219 A-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-----ET-----HNLTLSEE---DTLFGGQVSNLQ  283 (576)
T ss_pred             c-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-----cc-----cceeeccc---cccCCCccCHHH
Confidence            2 244 788888888888888888999999999999987753210     00     00000001   124578899999


Q ss_pred             HHHHHHHhccCC-CCCceeeEEeecCC
Q 023708          240 VAQAALFLASEE-AGFITAHNLVIDGG  265 (278)
Q Consensus       240 va~~~~~l~s~~-~~~~tG~~i~~dgG  265 (278)
                      ||++++|+++++ +.+  +++|.+-.+
T Consensus       284 VA~vVvfLasd~~as~--~kvvevi~~  308 (576)
T PLN03209        284 VAELMACMAKNRRLSY--CKVVEVIAE  308 (576)
T ss_pred             HHHHHHHHHcCchhcc--ceEEEEEeC
Confidence            999999999854 344  445555444

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=1.5e-22  Score=177.85  Aligned_cols=216  Identities=17%  Similarity=0.157  Sum_probs=154.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++|++|||||+|+||++++++|+++|  ++|++.+|+......+....   ++.++.+|++|.+++.++++       +
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            468999999999999999999999986  78998888765444333322   36788999999999888775       5


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+|||+||....  +..+.   +..+.+++|+.+++++++++.+.    + .+++|++||.....|   ...|++||++
T Consensus        75 iD~Vih~Ag~~~~--~~~~~---~~~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~~p---~~~Y~~sK~~  141 (324)
T TIGR03589        75 VDYVVHAAALKQV--PAAEY---NPFECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAANP---INLYGATKLA  141 (324)
T ss_pred             CCEEEECcccCCC--chhhc---CHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCCCC---CCHHHHHHHH
Confidence            9999999996422  22222   23578999999999999998863    2 469999999765433   4579999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhh--HHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEML--VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      .+.+++.++.+++..|+++++++||.+.++..  ...+....... ..+..+      ......+.+.+++|++++++.+
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~-~~~~~i------~~~~~~r~~i~v~D~a~a~~~a  214 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEG-VTELPI------TDPRMTRFWITLEQGVNFVLKS  214 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhC-CCCeee------CCCCceEeeEEHHHHHHHHHHH
Confidence            99999999888888899999999999987521  01111000000 000000      0000113478999999999999


Q ss_pred             ccCCCCCceeeEE
Q 023708          248 ASEEAGFITAHNL  260 (278)
Q Consensus       248 ~s~~~~~~tG~~i  260 (278)
                      +...   ..|+.+
T Consensus       215 l~~~---~~~~~~  224 (324)
T TIGR03589       215 LERM---LGGEIF  224 (324)
T ss_pred             HhhC---CCCCEE
Confidence            8542   135555

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=1.3e-21  Score=173.75  Aligned_cols=230  Identities=14%  Similarity=0.037  Sum_probs=161.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh----hCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST----IGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++||++|||||+|+||++++++|+++|++|++++|+..........    .++.++.+|+++.+++.+++++.     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            4679999999999999999999999999999998875433322211    13567889999999999988753     68


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------CCC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------GGL  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~  158 (278)
                      |+|||+||...     ...+.+++...+++|+.+++.+++++.+.    +..+++|++||...+.            +..
T Consensus        77 d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRAI----GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHhc----CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            99999998532     23344677889999999999999987532    1146899999976542            123


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCC----CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC-----CC
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGK----HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG-----SL  229 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~----~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  229 (278)
                      +...|+.+|.+.+.+++.++.++.+    ++++++.++|+.+.++......       .+.+.-.........     ..
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~-------~~~~~~~~~~~~g~~~~~~~g~  220 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAED-------RLIPDVIRAFSSNKIVIIRNPD  220 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhh-------hhhHHHHHHHhcCCCeEECCCC
Confidence            3568999999999999999988854    4899999999999876321000       000111111111100     01


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCC--CCceeeEEeecCC
Q 023708          230 LRGRSASIEDVAQAALFLASEEA--GFITAHNLVIDGG  265 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~--~~~tG~~i~~dgG  265 (278)
                      ..+.++..+|++++++.++....  ....|+.+++-.|
T Consensus       221 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       221 ATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             cccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            23567899999999998775321  1123568888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=2.4e-21  Score=170.21  Aligned_cols=221  Identities=20%  Similarity=0.202  Sum_probs=156.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-------hCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-------IGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+........       .++.++.+|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            479999999999999999999999999999888775433222111       135678999999998888875       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------  158 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------  158 (278)
                      ++|+||||||....     ..+.+++.+.+++|+.+++++++++.+.+   + .++||++||..++.+..          
T Consensus        77 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhheecCCccCCCCCccC
Confidence            58999999996421     22335678999999999999999988753   1 46999999987653211          


Q ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          159 ------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       159 ------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ....|+.||.+.+.+++.+++++   ++++..++|+.+.+|......       ...+..+.......
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~-------~~~~~~i~~~~~~~  217 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTL-------NFSVAVIVELMKGK  217 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCC-------CchHHHHHHHHcCC
Confidence                        01369999999999999887765   799999999999887532100       00111111111111


Q ss_pred             CC--CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          227 GS--LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       227 ~~--~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      ..  ...++++.++|+|++++.++....  . +..++++|+
T Consensus       218 ~~~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        218 NPFNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             CCCCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            10  012468899999999999886542  1 336788554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.88  E-value=1.1e-20  Score=167.10  Aligned_cols=234  Identities=15%  Similarity=0.061  Sum_probs=155.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHHh-----hhCCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALAS-----TIGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .++++|++|||||+|+||++++++|+++|++|++++|..+.     .+.+.+     ..++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            36778999999999999999999999999999998876432     222211     12367889999999999998876


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----  157 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----  157 (278)
                      .     ++|+|||+|+.....     ...++....+++|+.++.++++++.+...+++...++|++||...+-..     
T Consensus        82 ~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA-----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccchh-----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            4     599999999975321     2224557788999999999999999886542212378888887554321     


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHHHHCC---CCcEEEEecCCCCCChh---hHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          158 -----LASHAYSLSKEAIIGLARSTACELGK---HGIRVNCISPHGVPSEM---LVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       158 -----~~~~~Y~~sK~a~~~l~~~l~~e~~~---~~i~v~~v~pG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                           .+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+   ...............      .....
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~  225 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKK------LFLGN  225 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCc------eEeCC
Confidence                 13457999999999999999888742   23344555565433211   111110000000000      00000


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       227 ~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                       ....+.++.++|+|++++.++....    +..+++.+|..
T Consensus       226 -g~~~rd~i~v~D~a~a~~~~~~~~~----~~~yni~~g~~  261 (340)
T PLN02653        226 -LDASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEES  261 (340)
T ss_pred             -CcceecceeHHHHHHHHHHHHhcCC----CCcEEecCCCc
Confidence             0012467899999999999986432    34678877754

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.88  E-value=1.9e-20  Score=170.75  Aligned_cols=182  Identities=18%  Similarity=0.062  Sum_probs=138.0

Q ss_pred             ccCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--------------------HHHHHHh--hhC
Q 023708            5 DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--------------------LGAALAS--TIG   62 (278)
Q Consensus         5 ~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--------------------~~~~~~~--~~~   62 (278)
                      .++.|.++.++++|++|||||+|+||++++++|+++|++|+++++...                    .+.....  ..+
T Consensus        35 ~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  114 (442)
T PLN02572         35 TPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKE  114 (442)
T ss_pred             CCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCc
Confidence            345566778899999999999999999999999999999999764210                    0111111  114


Q ss_pred             CeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCC
Q 023708           63 GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK  142 (278)
Q Consensus        63 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  142 (278)
                      +.++.+|++|.+++.+++++.     ++|+|||+|+...  .+....+.++++..+++|+.+++++++++...-.    .
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv----~  183 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP----D  183 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC----C
Confidence            678999999999999988753     6999999997532  2334455667788899999999999998876421    2


Q ss_pred             cEEEEecCchhhcC------------------------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCC
Q 023708          143 GSIICTSSSAAIMG------------------------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPS  198 (278)
Q Consensus       143 ~~iv~vsS~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t  198 (278)
                      .++|++||...+..                        ..+...|+.||.+.+.+++.++..+   |+++..++|+.+..
T Consensus       184 ~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyG  260 (442)
T PLN02572        184 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYG  260 (442)
T ss_pred             ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccC
Confidence            48999999875421                        1123479999999999998877664   79999999998877


Q ss_pred             hh
Q 023708          199 EM  200 (278)
Q Consensus       199 ~~  200 (278)
                      +.
T Consensus       261 p~  262 (442)
T PLN02572        261 VR  262 (442)
T ss_pred             CC
Confidence            74

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=9.9e-20  Score=159.81  Aligned_cols=221  Identities=20%  Similarity=0.184  Sum_probs=153.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH---HHh----hhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA---LAS----TIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..+|++|||||+|+||++++++|+++|++|+++.|+.+....   +..    ..++.++.+|+++.++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999999988886543222   211    1136788899999998888876      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CC---------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GG---------  157 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~---------  157 (278)
                       ++|+|||+|+....    ..  .+...+.+++|+.++.++++++...    ...++||++||..++. +.         
T Consensus        77 -~~d~vih~A~~~~~----~~--~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         77 -GCDAVFHTASPVFF----TV--KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             -CCCEEEEeCCCcCC----CC--CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccCCCCCCc
Confidence             59999999986421    11  1233567899999999999887542    1146899999987532 11         


Q ss_pred             -------C-----CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhh
Q 023708          158 -------L-----ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD  225 (278)
Q Consensus       158 -------~-----~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                             +     ....|+.||.+.+.+++.+.+++   +++++.++|+.+.++.....       ..............
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~-------~~~~~~~~~~~~~g  215 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPT-------LNFSVELIVDFING  215 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCC-------CCccHHHHHHHHcC
Confidence                   0     12469999999999999887765   79999999999988753210       00011112222211


Q ss_pred             cCC--CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          226 SGS--LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       226 ~~~--~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      ...  ...+.++.++|+|++++.++....  ..| .++++|+
T Consensus       216 ~~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        216 KNLFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             CCCCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            110  112468899999999999986542  234 6777544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.85  E-value=9.4e-20  Score=159.22  Aligned_cols=181  Identities=16%  Similarity=0.106  Sum_probs=137.3

Q ss_pred             CCcEEEEeCCCChhHHH--HHHHHHHcCCeEEEEecchH---------------HHHHHHhhhC--CeEEEecCCCHHHH
Q 023708           16 TGKVAVITGGARGIGAA--TAKLFAENGAHIVIADILDE---------------LGAALASTIG--GRYIHCDVTKEEDV   76 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~--ia~~L~~~g~~Vi~~~r~~~---------------~~~~~~~~~~--~~~~~~D~~~~~~i   76 (278)
                      -+|++||||+++|||.+  ||+.| +.|++|+++++..+               ...+..+..+  +..+.||+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            36999999999999999  89999 99999888874221               1222223333  45789999999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCCCCCC----------------c-----------------ccCCHHHHHHHHHHHhH
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISGSGGS----------------I-----------------TSLNMEDVKFLLSVNLN  123 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~~~~~----------------~-----------------~~~~~~~~~~~~~~N~~  123 (278)
                      +++++++.+.+|+||+||||+|......|                +                 ...+.++++..+  +++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KVM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hhh
Confidence            99999999999999999999997522110                1                 124445555553  344


Q ss_pred             HH---HHHHHH--HHHHHHccCCCcEEEEecCchhhcCCCCC--chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCC
Q 023708          124 GI---LHGIKH--AAKAMIEGQRKGSIICTSSSAAIMGGLAS--HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGV  196 (278)
Q Consensus       124 ~~---~~l~~~--~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v  196 (278)
                      |.   ..++++  ..+.|..   .+++|-.|........|.+  ..-|.+|++|+.-++.|+.+|++.|||+|++.+|.+
T Consensus       197 ggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             ccchHHHHHHHHHhcccccC---CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            44   333333  3344433   6899999999988877765  478999999999999999999999999999999999


Q ss_pred             CChhhH
Q 023708          197 PSEMLV  202 (278)
Q Consensus       197 ~t~~~~  202 (278)
                      .|....
T Consensus       274 ~T~Ass  279 (398)
T PRK13656        274 VTQASS  279 (398)
T ss_pred             cchhhh
Confidence            988543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.85  E-value=2.3e-19  Score=159.54  Aligned_cols=225  Identities=17%  Similarity=0.110  Sum_probs=154.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEE-EEecchHH--HHHHHh---hhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIV-IADILDEL--GAALAS---TIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi-~~~r~~~~--~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |++|||||+|+||++++++|+++|+.++ +.++..+.  ...+..   ..++.++.+|++|.++++++++.     .++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhh-----cCCC
Confidence            5799999999999999999999998755 44543221  111111   11356788999999999888875     2699


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc---c-CCCcEEEEecCchhhc------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE---G-QRKGSIICTSSSAAIM------------  155 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---~-~~~~~iv~vsS~~~~~------------  155 (278)
                      +|||+||....     ..+.++++..+++|+.++.++++++.+.+..   . ....++|++||...+.            
T Consensus        77 ~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~  151 (355)
T PRK10217         77 CVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET  151 (355)
T ss_pred             EEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC
Confidence            99999986422     2334677899999999999999999876421   1 1135899999976432            


Q ss_pred             -CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHhhcC-C---
Q 023708          156 -GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVRDSG-S---  228 (278)
Q Consensus       156 -~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~---  228 (278)
                       +..+...|+.||.+.+.+++.+++++   ++++..+.|+.+..|...  ...          +.-+........ +   
T Consensus       152 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~----------~~~~~~~~~~~~~~~~g  218 (355)
T PRK10217        152 TPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLI----------PLMILNALAGKPLPVYG  218 (355)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHH----------HHHHHHHhcCCCceEeC
Confidence             22345689999999999999998876   677777888776655321  000          001111111100 0   


Q ss_pred             --CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 --LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 --~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                        ...+.++.++|+++++..++...   ..|..+++.+|...
T Consensus       219 ~g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        219 NGQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             CCCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence              01246899999999999888643   34678999888654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=1.3e-19  Score=160.91  Aligned_cols=207  Identities=19%  Similarity=0.196  Sum_probs=147.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+....+....       ++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4678999999999999999999999999999888754443322211       25678999999998888775       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----C------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----L------  158 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~------  158 (278)
                      .+|.|||+|+....    ..  .+.+...+++|+.++.++++++.+..    ..+++|++||...+.+.    +      
T Consensus        77 ~~d~ViH~A~~~~~----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF----ES--KDPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC----CC--CCchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhhcccCCCCCCccCccc
Confidence            58999999985421    11  12346788999999999999987642    13589999998643211    0      


Q ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHH--H-
Q 023708          159 ------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM--V-  223 (278)
Q Consensus       159 ------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~-  223 (278)
                                  ....|+.||.+.+.+++.++.++   |++++.++|+.+.+|......         .+......  . 
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~---------~~~~~~~~~~~~  214 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSM---------PPSLITALSLIT  214 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCC---------CccHHHHHHHhc
Confidence                        11379999999999999988764   899999999999887532100         00000000  0 


Q ss_pred             hh---cCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          224 RD---SGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       224 ~~---~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ..   ......+.+++++|++++++.++...
T Consensus       215 ~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        215 GNEAHYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CCccccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence            00   00012257899999999999998643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=6.4e-20  Score=147.82  Aligned_cols=169  Identities=24%  Similarity=0.341  Sum_probs=128.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch-------HHHHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA-HIVIADILD-------ELGAALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~-------~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|||||.+|||..+++.|+++|. +|++++|+.       ...+++.+. ..+.++.||++|++++.++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999985 899999882       122222221 23678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      |+.|||+||... ..++.+.+.++++..+...+.+..++.+.+.+     .....+|+.||+++..+.++...|+++.+.
T Consensus        82 i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            999999999864 46899999999999999999999998887665     125699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCC
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVP  197 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~  197 (278)
                      ++.+++....    .+.++.+|+.|...
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHh----CCCCEEEEEccccC
Confidence            9999987654    36778888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.4e-19  Score=143.85  Aligned_cols=140  Identities=26%  Similarity=0.419  Sum_probs=113.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+.+++|+++||||++|||+++++.|++.|++|++++|+.+...+..+++     ...++.+|+++.+++.++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999876655443332     2456889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC------CcEEEEecCchhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR------KGSIICTSSSAAI  154 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------~~~iv~vsS~~~~  154 (278)
                      +|++|++|||||+.....++++.+.++ ++  ..|+.+.+..++.+.+.|.++++      .|++.+|||.+..
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            999999999999875555666656555 44  67788888999999999877542      4788888887654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=3.8e-19  Score=154.48  Aligned_cols=214  Identities=12%  Similarity=0.034  Sum_probs=147.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+|++|||||+|+||++++++|+++|++|+++.|+.+  ........+     ++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999988532  221221211     36688899999998876664       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-C---------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-L---------  158 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~---------  158 (278)
                      .+|.++|.++...      +.. .++++.+++|+.+++++++++.+.+   + .++||++||..+.... +         
T Consensus        78 ~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~~~~~~~~~~~~~~  146 (297)
T PLN02583         78 GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVIWRDDNISTQKDVD  146 (297)
T ss_pred             CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHheecccccCCCCCCCC
Confidence            5889998765321      111 2467899999999999999998764   1 4699999998764311 0         


Q ss_pred             --CC----------chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          159 --AS----------HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       159 --~~----------~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                        .+          ..|+.||...+.+++.++++.   +++++.++|+.+.++....... .. ....      ..... 
T Consensus       147 E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~~-~~-~~~~------~~~~~-  214 (297)
T PLN02583        147 ERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHNP-YL-KGAA------QMYEN-  214 (297)
T ss_pred             cccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCchh-hh-cCCc------ccCcc-
Confidence              01          159999999999998887653   8999999999998875432110 00 0000      00000 


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       227 ~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                         ....+++++|+|++++..+....  ..| .+.+-++
T Consensus       215 ---~~~~~v~V~Dva~a~~~al~~~~--~~~-r~~~~~~  247 (297)
T PLN02583        215 ---GVLVTVDVNFLVDAHIRAFEDVS--SYG-RYLCFNH  247 (297)
T ss_pred             ---cCcceEEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence               11247899999999999996432  234 4555444

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=3.8e-19  Score=158.07  Aligned_cols=172  Identities=22%  Similarity=0.176  Sum_probs=129.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      -+++++|||||+|+||++++++|+++|++|++++|+.+....+.+..    ++.++.+|+++.+++.++++       ++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GC   80 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CC
Confidence            45788999999999999999999999999999888765544433322    36688999999998888764       58


Q ss_pred             cEEEECCccCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDV--KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------  158 (278)
                      |+|||+|+...........+.+++  ...+++|+.++.++++++.+..    ..+++|++||.+.+...+          
T Consensus        81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~~~  156 (353)
T PLN02896         81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTSSISTLTAKDSNGRWRAVVD  156 (353)
T ss_pred             CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEechhhccccccCCCCCCccC
Confidence            999999997533211122233333  4567788899999999887642    146899999987653110          


Q ss_pred             ---------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChh
Q 023708          159 ---------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM  200 (278)
Q Consensus       159 ---------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~  200 (278)
                                     ....|+.||.+.+.+++.+++++   ++++..++|+.+.+|.
T Consensus       157 E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        157 ETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPF  210 (353)
T ss_pred             cccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCC
Confidence                           11379999999999999887765   7999999998887774

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.83  E-value=3.7e-19  Score=157.25  Aligned_cols=210  Identities=21%  Similarity=0.227  Sum_probs=144.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHH-----hhh-CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA-----STI-GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~-----~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++++|||||+|+||++++++|+++|++|+++.|+.+......     ... ++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            34788999999999999999999999999988877643322111     111 35688999999998888765       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------  157 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------  157 (278)
                      ++|+|||+|+...    ..  ..+.+...+++|+.++.++++++.+..    ..+++|++||.+.+...           
T Consensus        80 ~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~----~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKAK----SVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeecceeeeccCCCCCCceecc
Confidence            5899999998531    11  113345678999999999999887641    14699999998765311           


Q ss_pred             -------------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHh
Q 023708          158 -------------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR  224 (278)
Q Consensus       158 -------------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                   +....|+.||.+.+.+++.++.++   ++++..++|+.+.+|........       ..........
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~~~-------~~~~~~~~~~  219 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSLTSDIPS-------SLSLAMSLIT  219 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCccCCCCC-------cHHHHHHHHc
Confidence                         124469999999999999887764   79999999998887742110000       0000000000


Q ss_pred             hc-------CCCC----CCCCCCHHHHHHHHHHhccCC
Q 023708          225 DS-------GSLL----RGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       225 ~~-------~~~~----~~~~~~~edva~~~~~l~s~~  251 (278)
                      ..       ...+    ...+++++|++++++.++...
T Consensus       220 ~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        220 GNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             CCccccccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence            00       0000    136899999999999998654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=8.3e-19  Score=155.34  Aligned_cols=227  Identities=16%  Similarity=0.077  Sum_probs=146.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-----HHHHHHhh------hCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDE-----LGAALAST------IGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-----~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      |++|||||+|+||++++++|+++|++|++++|..+     ....+.+.      .++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            68999999999999999999999999999988643     22222211      13678899999999999988753   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------  156 (278)
                        ++|+|||+|+......     ..+.....+++|+.++.++++++.+.-.+  +..++|++||...+..          
T Consensus        78 --~~d~ViH~Aa~~~~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCcccccch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              5899999999753321     12334577889999999999998874211  1247999999765431          


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHHCCC---CcEEEEecCCCCCC---hhhHHHHHhhhccCCCCHHHHHHHHhhcCCC
Q 023708          157 -GLASHAYSLSKEAIIGLARSTACELGKH---GIRVNCISPHGVPS---EMLVNAYRKYLGKADMKPEEVCKMVRDSGSL  229 (278)
Q Consensus       157 -~~~~~~Y~~sK~a~~~l~~~l~~e~~~~---~i~v~~v~pG~v~t---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (278)
                       ..+...|+.||.+.+.+++.++.++.-.   ++.++...|+.-..   ............ ....+    .....  ..
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~g~--g~  221 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKL-GLQEK----LYLGN--LD  221 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHc-CCCCc----eeeCC--Cc
Confidence             1234589999999999999998876311   12223344542111   111111111000 00000    00000  01


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ..+.++.++|++++++.++....    +..+++-+|..
T Consensus       222 ~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~  255 (343)
T TIGR01472       222 AKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGET  255 (343)
T ss_pred             cccCceeHHHHHHHHHHHHhcCC----CccEEecCCCc
Confidence            23568899999999998886432    23677776654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=2.4e-19  Score=159.03  Aligned_cols=231  Identities=18%  Similarity=0.101  Sum_probs=155.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH----HHHHHhh------hCCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL----GAALAST------IGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~----~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .-+++|++|||||+|.||.+++++|+++|++|++++|....    .......      .++.++.+|+.|.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            35677999999999999999999999999999999874321    1111111      135678999999888887775 


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----  157 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----  157 (278)
                            .+|+|||.|+......     ..++....+++|+.++.++++++...    + -.++|++||...+...     
T Consensus        90 ------~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~----~-~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARDA----H-VSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEeechHhhCCCCCCCC
Confidence                  5899999998643221     12345568999999999999877542    2 4589999998765321     


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          158 ------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       158 ------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                            .+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|......  .  ...+-+..+.........   
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~--~--~~~~i~~~~~~~~~~~~i~~~  226 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNG--A--YSAVIPRWILSLLKDEPIYIN  226 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCC--c--cccCHHHHHHHHHcCCCcEEe
Confidence                  123479999999999998876664   799999999888776321000  0  000001111111111100   


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          229 ---LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       229 ---~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                         ...+.++.++|++++++.++........|..+++.+|..
T Consensus       227 g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        227 GDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             CCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence               012457899999999987764322223578899977755

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=8.2e-19  Score=145.80  Aligned_cols=223  Identities=20%  Similarity=0.129  Sum_probs=167.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--eEEEEec-----chHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--HIVIADI-----LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++|||||.|+||.+.++.+.++.-  .|+.++.     +.+.+..+....+..++++|+.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4689999999999999999998864  4566543     3455555665556789999999999999998753     79


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-------------CC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-------------GG  157 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------~~  157 (278)
                      |+++|-|+-.+...++     ++....+++|+.|++.|++++...+.+    -++++||+...+-             |.
T Consensus        76 D~VvhfAAESHVDRSI-----~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAESHVDRSI-----DGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhccccccc-----cChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCcccCCCC
Confidence            9999999866554455     778899999999999999999988742    4899999987642             34


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------CCC
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------LLR  231 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  231 (278)
                      .+.++|++|||+.++|++++.+.|   |+.+...++---..|-...        .++-|-.+...+...+.      .-.
T Consensus       147 ~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfp--------EKlIP~~I~nal~g~~lpvYGdG~~i  215 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFP--------EKLIPLMIINALLGKPLPVYGDGLQI  215 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCc--------hhhhHHHHHHHHcCCCCceecCCcce
Confidence            456789999999999999999998   7888888776555553221        11123333333332221      013


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.+..+||=++++..++....  + |+++++.||.-.
T Consensus       216 RDWl~VeDh~~ai~~Vl~kg~--~-GE~YNIgg~~E~  249 (340)
T COG1088         216 RDWLYVEDHCRAIDLVLTKGK--I-GETYNIGGGNER  249 (340)
T ss_pred             eeeEEeHhHHHHHHHHHhcCc--C-CceEEeCCCccc
Confidence            667899999999999996542  3 999999999765

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=2e-18  Score=147.50  Aligned_cols=223  Identities=19%  Similarity=0.147  Sum_probs=164.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH--HHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA--LASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~--~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+++|+||||||.||.+|++.|+++||+|+.+.|+++..+.  ...++     +.+.+..|+.+++++++.++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            67999999999999999999999999999999998766333  12222     26788999999999999997       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-CC--------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-LA--------  159 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~--------  159 (278)
                      ++|+|+|.|.....    ...+  .-.+.++..+.|+.++++++...=    .-.|||++||.++..+. +.        
T Consensus        78 gcdgVfH~Asp~~~----~~~~--~e~~li~pav~Gt~nVL~ac~~~~----sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF----DLED--PEKELIDPAVKGTKNVLEACKKTK----SVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCC----CCCC--cHHhhhhHHHHHHHHHHHHHhccC----CcceEEEeccHHHhccCCcCCCCCcccc
Confidence            79999999975422    1111  234789999999999999888752    24799999999997654 11        


Q ss_pred             ---C----------chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          160 ---S----------HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       160 ---~----------~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                         |          ..|..||.-.+.-+..++++.   ++...+|+|+.|-.|.......       .+......++...
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~-------~s~~~~l~~i~G~  217 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLN-------SSLNALLKLIKGL  217 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccc-------hhHHHHHHHHhcc
Confidence               1          148899988888888887775   7999999999998887665210       1223333444331


Q ss_pred             CC-C--CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          227 GS-L--LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       227 ~~-~--~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .. .  ....+++++|+|.+.++++..+.  ..|+.|-.....+
T Consensus       218 ~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  218 AETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             cccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence            11 1  12246899999999999996553  4488887776655

>PLN02214 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.3e-18  Score=153.94  Aligned_cols=216  Identities=20%  Similarity=0.181  Sum_probs=149.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH-----HHhh-hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-----LAST-IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~-----~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+++|++|||||+|+||++++++|+++|++|+++.|+.+....     +... .++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh------
Confidence            3567899999999999999999999999999999887543211     1110 135678899999998888776      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----C-----
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----L-----  158 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~-----  158 (278)
                       ++|+|||+|+.. .         +++.+.+++|+.++.++++++.+.    + .+++|++||..+..+.    +     
T Consensus        81 -~~d~Vih~A~~~-~---------~~~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avyg~~~~~~~~~~~  144 (342)
T PLN02214         81 -GCDGVFHTASPV-T---------DDPEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVYMDPNRDPEAVVD  144 (342)
T ss_pred             -cCCEEEEecCCC-C---------CCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeeeccCCCCCCcccC
Confidence             599999999853 1         235678999999999999987753    2 4589999997543311    0     


Q ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          159 ------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       159 ------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                                  ....|+.||.+.+.+++.++.++   |+++..++|+.+..+.......       .....+.......
T Consensus       145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~-------~~~~~~~~~~~g~  214 (342)
T PLN02214        145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTIN-------ASLYHVLKYLTGS  214 (342)
T ss_pred             cccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC-------chHHHHHHHHcCC
Confidence                        12369999999999999887765   7999999999987774321000       0000000000000


Q ss_pred             CC---CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          227 GS---LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       227 ~~---~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ..   ...+.++.++|+|++++.++....  ..| .+++.+
T Consensus       215 ~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~~g-~yn~~~  252 (342)
T PLN02214        215 AKTYANLTQAYVDVRDVALAHVLVYEAPS--ASG-RYLLAE  252 (342)
T ss_pred             cccCCCCCcCeeEHHHHHHHHHHHHhCcc--cCC-cEEEec
Confidence            00   012468899999999999886432  224 455543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.82  E-value=1.4e-18  Score=151.66  Aligned_cols=220  Identities=18%  Similarity=0.139  Sum_probs=151.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CeEEEEecch-----HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           19 VAVITGGARGIGAATAKLFAENG--AHIVIADILD-----ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++||||+|+||.+++++|++.|  ++|++.+|..     +....+....++.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  7898877532     11111211114678899999999999888742     599


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------------CCC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------GLA  159 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~~  159 (278)
                      +|||+|+....     +.+.++++..+++|+.++..+++++.+.+.    ..++|++||...+..            ...
T Consensus        76 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999986422     223356778899999999999987766532    347999998654321            112


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHhhcC-CC-----CC
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVRDSG-SL-----LR  231 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~  231 (278)
                      ...|+.+|.+.+.+++.++.++   ++++..++|+.+..+...  ...          +........... ++     ..
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~  213 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLI----------PLMITNALAGKPLPVYGDGQQV  213 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHH----------HHHHHHHhcCCCceEeCCCceE
Confidence            3479999999999999987765   788999999988765321  111          111111111110 00     01


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++++|+++++..++.+.   ..|+.+++.++...
T Consensus       214 ~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       214 RDWLYVEDHCRAIYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             EeeEEHHHHHHHHHHHHcCC---CCCceEEeCCCCce
Confidence            24678999999999998643   35678888777543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=1.5e-18  Score=152.21  Aligned_cols=209  Identities=22%  Similarity=0.207  Sum_probs=144.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH---HHh----hhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA---LAS----TIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+....   +..    ..++.++.+|+++.+++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            46899999999999999999999999999988886543221   111    1135788999999988887775       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-c-CC---------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-M-GG---------  157 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~-~~---------  157 (278)
                      ++|+|||+|+....  .. .   +.....+++|+.++.++++++....   + .+++|++||.++. . +.         
T Consensus        76 ~~d~Vih~A~~~~~--~~-~---~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH--DV-T---DPQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC--CC-C---ChHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            58999999986421  11 1   1224788999999999999876531   1 4589999998642 1 11         


Q ss_pred             ------CC-----CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc
Q 023708          158 ------LA-----SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       158 ------~~-----~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                            +.     ...|+.+|.+.+.+++.+.+++   ++++..++|+.+.++......       ...+..........
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~-------~~~~~~~~~~~~~~  215 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTL-------NTSAEAILNLINGA  215 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCC-------CchHHHHHHHhcCC
Confidence                  00     1369999999999998877664   799999999999887532100       00111111111110


Q ss_pred             C--CCCCCCCCCHHHHHHHHHHhccCC
Q 023708          227 G--SLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       227 ~--~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .  +.....++.++|+|++++.++...
T Consensus       216 ~~~~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        216 QTFPNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             ccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence            0  011246899999999999988644

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=4.8e-18  Score=150.83  Aligned_cols=236  Identities=17%  Similarity=0.141  Sum_probs=150.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH----HHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE----LGAALAST-----IGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~----~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .|++|++|||||+|+||++++++|+++|++|++++|...    ....+...     .++.++.+|+++.+++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            467899999999999999999999999999999876421    11112111     13678899999999998887652 


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--------
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--------  156 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------  156 (278)
                          ++|.|||+|+.....     .+.+++.+.+++|+.++.++++++..    .+ .+++|++||...+..        
T Consensus        81 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG-----ESVAKPLLYYDNNLVGTINLLEVMAK----HG-CKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ----CCCEEEEccccCCcc-----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCCCCCCC
Confidence                799999999964221     12356778999999999998886543    22 468999999755421        


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC---HHHHHHHHhhc-CC-
Q 023708          157 ---GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK---PEEVCKMVRDS-GS-  228 (278)
Q Consensus       157 ---~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~-  228 (278)
                         ..+...|+.+|.+.+.+++.++.+.  .++++..+.++.+..+.....+..  ......   ........... .. 
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGE--DPKGIPNNLMPYVQQVAVGRRPEL  222 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccC--CCCCCcchHHHHHHHHHhCCCCce
Confidence               1235689999999999999887652  356677666543322110000000  000000   00001110000 00 


Q ss_pred             ------------CCCCCCCCHHHHHHHHHHhccCC--CCCceeeEEeecCCccc
Q 023708          229 ------------LLRGRSASIEDVAQAALFLASEE--AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ------------~~~~~~~~~edva~~~~~l~s~~--~~~~tG~~i~~dgG~~~  268 (278)
                                  .....++.++|++++++.++...  .....|+.+++.+|...
T Consensus       223 ~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~  276 (352)
T PLN02240        223 TVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGT  276 (352)
T ss_pred             EEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcE
Confidence                        01134688999999988777432  12245688998877653

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.80  E-value=8.1e-18  Score=149.44  Aligned_cols=223  Identities=17%  Similarity=0.122  Sum_probs=148.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCe-EEEEecch--HHHHHHHh---hhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAH-IVIADILD--ELGAALAS---TIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~--~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|||||+|+||.+++++|+++|+. |+.+++..  .....+..   ..++.++.+|++|.+++.+++++     .++|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQ-----HQPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHh-----cCCCE
Confidence            5899999999999999999999976 54455421  11112211   12356789999999999998875     26999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc----CCCcEEEEecCchhhcC------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG----QRKGSIICTSSSAAIMG------------  156 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~vsS~~~~~~------------  156 (278)
                      |||+||......     ..++.++.+++|+.++.++++++.+.|...    +...++|++||...+..            
T Consensus        77 vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (352)
T PRK10084         77 VMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEE  151 (352)
T ss_pred             EEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccccc
Confidence            999998642211     123456789999999999999998876321    11348999999764431            


Q ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHhh
Q 023708          157 ---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVRD  225 (278)
Q Consensus       157 ---------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                               ..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..+...  ...          +.........
T Consensus       152 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~----------~~~~~~~~~~  218 (352)
T PRK10084        152 LPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLI----------PLVILNALEG  218 (352)
T ss_pred             CCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchH----------HHHHHHHhcC
Confidence                     1234589999999999999998876   566666777666554311  000          0001111111


Q ss_pred             cC-CC-----CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          226 SG-SL-----LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       226 ~~-~~-----~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .. .+     ....++.++|+++++..++...   ..|..+++-++..
T Consensus       219 ~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        219 KPLPIYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence            00 00     1245789999999999888643   2467888877754

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=5.3e-18  Score=151.40  Aligned_cols=209  Identities=17%  Similarity=0.166  Sum_probs=143.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh----------hCCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST----------IGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .+.++|++|||||+|+||.+++++|+++|++|+++.|+.+....+.+.          .++.++.+|++|.+++.++++ 
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            356789999999999999999999999999999888876554433221          135678899999999988876 


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-c----CC
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-M----GG  157 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~----~~  157 (278)
                            .+|.+||.|+...... ..    .......++|+.+..++++++...-   + -.++|++||..+. .    +.
T Consensus       128 ------~~d~V~hlA~~~~~~~-~~----~~~~~~~~~nv~gt~~llea~~~~~---~-v~r~V~~SS~~~~vyg~~~~~  192 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAG-LS----GYTKSMAELEAKASENVIEACVRTE---S-VRKCVFTSSLLACVWRQNYPH  192 (367)
T ss_pred             ------hccEEEecCeeecccc-cc----cccchhhhhhHHHHHHHHHHHHhcC---C-ccEEEEeccHHHhcccccCCC
Confidence                  4799999998653321 10    1112446778999998888766431   1 4589999996421 1    00


Q ss_pred             --C----------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH
Q 023708          158 --L----------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV  219 (278)
Q Consensus       158 --~----------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~  219 (278)
                        +                ....|+.||.+.+.+++.++.+   .|++++.++|+.+.+|.....          .+...
T Consensus       193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~----------~~~~~  259 (367)
T PLN02686        193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRR----------NSTAT  259 (367)
T ss_pred             CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCC----------CChhH
Confidence              0                1236999999999999988776   389999999999988853110          00000


Q ss_pred             HHHHhhcCCC-C--CCCCCCHHHHHHHHHHhccC
Q 023708          220 CKMVRDSGSL-L--RGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       220 ~~~~~~~~~~-~--~~~~~~~edva~~~~~l~s~  250 (278)
                      .........+ .  ...+.+++|++++++.++..
T Consensus       260 ~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~  293 (367)
T PLN02686        260 IAYLKGAQEMLADGLLATADVERLAEAHVCVYEA  293 (367)
T ss_pred             HHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhc
Confidence            0111100000 0  12378999999999988863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.78  E-value=8.9e-18  Score=148.96  Aligned_cols=227  Identities=16%  Similarity=0.160  Sum_probs=147.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCC-CHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVT-KEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++|||||+|.||++++++|++. |++|++++|..+....+....++.++.+|++ +.+.+.++++       ++|+|||
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH   74 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK-------KCDVILP   74 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc-------CCCEEEE
Confidence            46999999999999999999986 6999999987654444433334778899998 6666655543       6999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------------
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------------  157 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------------  157 (278)
                      +|+......     ..++.+..+++|+.+..++++++...      ..++|++||...+...                  
T Consensus        75 ~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~~------~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~  143 (347)
T PRK11908         75 LVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY------GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPIN  143 (347)
T ss_pred             CcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHhc------CCeEEEEecceeeccCCCcCcCccccccccCcCC
Confidence            998643221     11344677899999999988876642      2489999997654211                  


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC------CCCC
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG------SLLR  231 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  231 (278)
                      .....|+.+|.+.+.+++.++...   ++.+..+.|+.+..+..............+-+.-.........      ....
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~  220 (347)
T PRK11908        144 KPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQK  220 (347)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCcee
Confidence            012269999999999999887654   6788888887765553211000000000000011111111100      0012


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      +.++.++|++++++.++........|+.+++.++
T Consensus       221 r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        221 RAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            4589999999999998865433345788999764

>PLN02427 UDP-apiose/xylose synthase

Probab=99.78  E-value=1.1e-17  Score=150.41  Aligned_cols=228  Identities=14%  Similarity=0.150  Sum_probs=148.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhh------hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALAST------IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.++||||||+|.||++++++|+++ |++|++++|..+....+...      .++.++.+|+.|.+++.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45568999999999999999999998 59999998876554443321      136788999999998887775      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---------C
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---------L  158 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------~  158 (278)
                       .+|+|||+|+..... ...    .+..+.+..|+.+..++++++...      ..++|++||...+...         +
T Consensus        86 -~~d~ViHlAa~~~~~-~~~----~~~~~~~~~n~~gt~~ll~aa~~~------~~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICTPA-DYN----TRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccChh-hhh----hChHHHHHHHHHHHHHHHHHHHhc------CCEEEEEeeeeeeCCCcCCCCCcccc
Confidence             489999999865321 111    222345678999999988876532      2589999997543210         0


Q ss_pred             ------------------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCC
Q 023708          159 ------------------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM  214 (278)
Q Consensus       159 ------------------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~  214 (278)
                                              ....|+.||.+.+.+++.++..   .++++..++|+.+..+...... ........
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~-~~~~~~~~  229 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIP-GIDGPSEG  229 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccc-cccccccc
Confidence                                    1136999999999999876544   4799999999988776421000 00000000


Q ss_pred             CHHHH----HHHHhhcCC------CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          215 KPEEV----CKMVRDSGS------LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       215 ~~~~~----~~~~~~~~~------~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      .+.-+    .........      .....++.++|+|++++.++.... ...|..+++-+|
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            00000    111111100      011357899999999999885431 234678888765

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.78  E-value=7.8e-18  Score=144.62  Aligned_cols=224  Identities=21%  Similarity=0.225  Sum_probs=155.3

Q ss_pred             EEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHH-HHHhhhCCe-EEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           21 VITGGARGIGAATAKLFAENG--AHIVIADILDELGA-ALASTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        21 lVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~-~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      |||||+|.||.+++++|+++|  ++|.+.++...... ......+.. ++.+|++|.+++.++++       ++|+|||.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H~   73 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALE-------GVDVVFHT   73 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhc-------CCceEEEe
Confidence            699999999999999999999  78888887654322 122223333 88999999999999887       69999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC---C--------------CC
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---G--------------LA  159 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~---~--------------~~  159 (278)
                      |+......      ....+..+++|+.|+-++++++...    + -.++|++||.++..+   .              ..
T Consensus        74 Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~  142 (280)
T PF01073_consen   74 AAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSP  142 (280)
T ss_pred             CccccccC------cccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccc
Confidence            98653322      2456789999999999999988754    2 569999999987654   1              12


Q ss_pred             CchhhhhHHHHHHHHHHHHH-HHC-CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHH--HhhcC-CCCCCCC
Q 023708          160 SHAYSLSKEAIIGLARSTAC-ELG-KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM--VRDSG-SLLRGRS  234 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~-e~~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~  234 (278)
                      ...|+.||+..|.++..... ++. ...++..+|+|..|..|..........       ......  ..... ..-...+
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~-------~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLV-------KMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhh-------HHHHhcccceeecCCCceECc
Confidence            33799999999999987654 222 125889999999888775432211000       000000  00000 0011347


Q ss_pred             CCHHHHHHHHHHhcc---CC--CCCceeeEEeecCCcccC
Q 023708          235 ASIEDVAQAALFLAS---EE--AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       235 ~~~edva~~~~~l~s---~~--~~~~tG~~i~~dgG~~~~  269 (278)
                      ..++++|.+.+..+.   +.  .....|+.+.+..|....
T Consensus       216 vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  216 VYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             EeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            789999999876543   22  456899999999887553

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.77  E-value=1.2e-17  Score=159.66  Aligned_cols=231  Identities=14%  Similarity=0.112  Sum_probs=152.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHH-HHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEED-VESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~g~id~   92 (278)
                      -+++++|||||+|.||++++++|+++ |++|++++|............++.++.+|++|.++ ++++++       ++|+
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~-------~~D~  385 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK-------KCDV  385 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc-------CCCE
Confidence            35788999999999999999999986 79999999876543333222246788999998654 344443       6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---------------  157 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------  157 (278)
                      |||+|+........     ++.+..+++|+.+..++++++...      ..++|++||...+...               
T Consensus       386 ViHlAa~~~~~~~~-----~~~~~~~~~Nv~~t~~ll~a~~~~------~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T PRK08125        386 VLPLVAIATPIEYT-----RNPLRVFELDFEENLKIIRYCVKY------NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVG  454 (660)
T ss_pred             EEECccccCchhhc-----cCHHHHHHhhHHHHHHHHHHHHhc------CCeEEEEcchhhcCCCCCCCcCccccccccC
Confidence            99999975432111     234567899999999999887753      2489999997644210               


Q ss_pred             C---CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------
Q 023708          158 L---ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------  228 (278)
Q Consensus       158 ~---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  228 (278)
                      +   ....|+.||.+.+.+++.++..+   ++++..+.|+.+..+...............-+.-+.........      
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g  531 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGG  531 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCC
Confidence            1   12369999999999999887664   78999999988876642110000000000001111111111000      


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ...+.++.++|++++++.++........|+.+++-+|.
T Consensus       532 ~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        532 KQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             ceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            01245789999999999988654333468889888774

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.77  E-value=2.4e-17  Score=144.65  Aligned_cols=210  Identities=19%  Similarity=0.178  Sum_probs=148.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++++||||+|+||.+++++|+++|++|++++|+.+....+. ..++.++.+|+++.+++.++++       ++|+|||+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-------GCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-------CCCEEEEec
Confidence            36999999999999999999999999999999765433222 2357789999999998888775       689999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC---------------CCch
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL---------------ASHA  162 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------------~~~~  162 (278)
                      +....    .   .++++..+++|+.++..+++++...    + .+++|++||...+.+.+               ....
T Consensus        73 ~~~~~----~---~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~  140 (328)
T TIGR03466        73 ADYRL----W---APDPEEMYAANVEGTRNLLRAALEA----G-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGH  140 (328)
T ss_pred             eeccc----C---CCCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccCh
Confidence            85421    1   1345678999999999998887643    2 46899999987654211               1247


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH------HHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCC
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV------NAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS  236 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
                      |+.+|.+.+.+++.++.++   ++++..++|+.+.++...      ......... .. +        .... ....+..
T Consensus       141 Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~-~~-~--------~~~~-~~~~~i~  206 (328)
T TIGR03466       141 YKRSKFLAEQAALEMAAEK---GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNG-KM-P--------AYVD-TGLNLVH  206 (328)
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcC-CC-c--------eeeC-CCcceEE
Confidence            9999999999999887653   789999999887655321      011000000 00 0        0000 1124678


Q ss_pred             HHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          237 IEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ++|+|++++.++...   ..|+.+++.|
T Consensus       207 v~D~a~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       207 VDDVAEGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHHHHHHHhCC---CCCceEEecC
Confidence            999999998888543   3577777753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.77  E-value=3e-17  Score=144.98  Aligned_cols=232  Identities=15%  Similarity=0.136  Sum_probs=145.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH----HHHh--hhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALAS--TIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~----~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|||||+|+||++++++|+++|++|++++|......    .+..  ..++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            5999999999999999999999999998865421111    1111  11356788999999988888763     36999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------CCC
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------LAS  160 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~  160 (278)
                      |||+||......     ..+...+.+++|+.++.++++++..    .+ .+++|++||...+...            ...
T Consensus        77 vvh~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAVGE-----SVQKPLEYYDNNVNGTLRLISAMRA----AN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCccccccc-----hhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            999998753211     1134567889999999998876543    22 4689999997654211            235


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC---HHHHHHHHhhc-C---------
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK---PEEVCKMVRDS-G---------  227 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~---------  227 (278)
                      ..|+.+|.+.+.+++.++.+..  ++++..++++.+..+.....+...  .....   ........... .         
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGED--PQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccC--CCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence            6899999999999999876642  566666665443332100000000  00000   00011111100 0         


Q ss_pred             C----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          228 S----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       228 ~----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +    .....++.++|+|++++.++........|+.+++.+|....
T Consensus       223 ~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        223 PTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             CCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence            0    01135789999999998887542222335789998776543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=8.3e-17  Score=136.44  Aligned_cols=200  Identities=17%  Similarity=0.165  Sum_probs=130.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-hCCeEEEecCCCH-HHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-IGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~   92 (278)
                      ..++++|||||+|+||++++++|+++|++|++..|+.+........ .++.++.+|+++. +++.+.+   .   .++|+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~---~---~~~d~   88 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI---G---DDSDA   88 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh---h---cCCCE
Confidence            4568999999999999999999999999999999987665443322 2477889999983 3332222   0   26999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc---CCCCCchhhhhHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM---GGLASHAYSLSKEA  169 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~Y~~sK~a  169 (278)
                      ||+|+|......+.         ..+++|+.+..++++++.    +.+ .+++|++||...+.   +.+....|...|..
T Consensus        89 vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~  154 (251)
T PLN00141         89 VICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLF  154 (251)
T ss_pred             EEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCCcccccCcchhHHHHH
Confidence            99999864221111         124678888888888764    223 57999999987542   22233456666654


Q ss_pred             HHHHH-HHHHHH-HCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          170 IIGLA-RSTACE-LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       170 ~~~l~-~~l~~e-~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ...+. +....+ +...|++++.|+||++.++......   .    ..+        .  ..+....++++|+|++++.+
T Consensus       155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~---~----~~~--------~--~~~~~~~i~~~dvA~~~~~~  217 (251)
T PLN00141        155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNI---V----MEP--------E--DTLYEGSISRDQVAEVAVEA  217 (251)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceE---E----ECC--------C--CccccCcccHHHHHHHHHHH
Confidence            43332 322222 4567899999999999766421100   0    000        0  00113367999999999999


Q ss_pred             ccCC
Q 023708          248 ASEE  251 (278)
Q Consensus       248 ~s~~  251 (278)
                      +...
T Consensus       218 ~~~~  221 (251)
T PLN00141        218 LLCP  221 (251)
T ss_pred             hcCh
Confidence            8644

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=4.2e-17  Score=146.86  Aligned_cols=227  Identities=17%  Similarity=0.176  Sum_probs=170.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .-+.||++|||||+|-||+++++++++.+. ++++.+|++-....+..++       +..++-+|+.|.+.++++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            357899999999999999999999999986 6778899887766655433       3567889999999999998753 


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                          ++|+++|.|+..+.  |+-|   ..+.+.+++|++|+.++++++...-     -.++|++|+.-+..|.   ..||
T Consensus       325 ----kvd~VfHAAA~KHV--Pl~E---~nP~Eai~tNV~GT~nv~~aa~~~~-----V~~~V~iSTDKAV~Pt---NvmG  387 (588)
T COG1086         325 ----KVDIVFHAAALKHV--PLVE---YNPEEAIKTNVLGTENVAEAAIKNG-----VKKFVLISTDKAVNPT---NVMG  387 (588)
T ss_pred             ----CCceEEEhhhhccC--cchh---cCHHHHHHHhhHhHHHHHHHHHHhC-----CCEEEEEecCcccCCc---hHhh
Confidence                69999999997644  2333   4567899999999999999998763     4589999999887665   4789


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh--hhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE--MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ++|...+.++.+++......+-++.+|.-|-|-..  ..-+.+++.+...+.  -.      -+.+...+-+.+.+|.++
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~Ggp--lT------vTdp~mtRyfMTI~EAv~  459 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGP--LT------VTDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCC--cc------ccCCCceeEEEEHHHHHH
Confidence            99999999999999877655789999999988532  222334333332211  00      011111245678888888


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+++...-   .-.|+.|.+|=|...
T Consensus       460 LVlqA~a~---~~gGeifvldMGepv  482 (588)
T COG1086         460 LVLQAGAI---AKGGEIFVLDMGEPV  482 (588)
T ss_pred             HHHHHHhh---cCCCcEEEEcCCCCe
Confidence            88887643   356888888877654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.76  E-value=5.5e-17  Score=142.13  Aligned_cols=233  Identities=17%  Similarity=0.110  Sum_probs=149.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++|||||+|+||++++++|+++|++|++.+|............    ++.++.+|+++.+++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            3799999999999999999999999998765332211111111    356788999999999888763     4799999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchh
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAY  163 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y  163 (278)
                      ||||......     ..++..+.+++|+.++..+++++.+.    + .+++|++||...+...           .....|
T Consensus        76 ~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAVGE-----SVQDPLKYYRNNVVNTLNLLEAMQQT----G-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCcch-----hhcCchhhhhhhHHHHHHHHHHHHhc----C-CCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            9999652211     22345678899999999998875432    2 4689999987654211           123579


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc-cCCCCHHHHHHHHhhcCC-------CC-----
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG-KADMKPEEVCKMVRDSGS-------LL-----  230 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~-----  230 (278)
                      +.+|++.+.+++.++++.  .++++..++|+.+..+.....+..... ....-+.-..........       .+     
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987663  378899999977765521110000000 000000000000000000       01     


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          231 -RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       231 -~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                       ...++.++|++++++.++........|+.+++.+|..+
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence             13468899999999988864322345678888777654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.75  E-value=3.4e-17  Score=136.94  Aligned_cols=213  Identities=19%  Similarity=0.231  Sum_probs=154.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      ||||||+|.||.+++++|.++|+.|+...|............++.++.+|+.|.++++++++..     .+|.+||+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc-----CceEEEEeecc
Confidence            7999999999999999999999998877776554443333336789999999999999999865     79999999986


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhhHH
Q 023708          100 SGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLSKE  168 (278)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~sK~  168 (278)
                      ..     .....++....++.|+.++..+++++...    + ..++|++||...+...           .....|+.+|.
T Consensus        76 ~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~  145 (236)
T PF01370_consen   76 SS-----NPESFEDPEEIIEANVQGTRNLLEAAREA----G-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKR  145 (236)
T ss_dssp             SS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHH
T ss_pred             cc-----ccccccccccccccccccccccccccccc----c-cccccccccccccccccccccccccccccccccccccc
Confidence            42     11222567788889999888888877754    2 3599999997654332           12446999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChh----h-HHHHHhhhccCCCCHHHHHHHHhhc------CCCCCCCCCCH
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEM----L-VNAYRKYLGKADMKPEEVCKMVRDS------GSLLRGRSASI  237 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  237 (278)
                      ..+.+.+.+.+..   ++++..++|+.+..+.    . ....          +.-........      .......++.+
T Consensus       146 ~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v  212 (236)
T PF01370_consen  146 AAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFL----------PSLIRQALKGKPIKIPGDGSQVRDFIHV  212 (236)
T ss_dssp             HHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHH----------HHHHHHHHTTSSEEEESTSSCEEEEEEH
T ss_pred             ccccccccccccc---cccccccccccccccccccccccccc----------chhhHHhhcCCcccccCCCCCccceEEH
Confidence            9999999998876   7999999998776665    1 1111          11111221111      00112456889


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEee
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~  262 (278)
                      +|++++++.++....  ..|+.+++
T Consensus       213 ~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  213 DDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHHHhCCC--CCCCEEEe
Confidence            999999999997664  56777765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=4e-17  Score=145.12  Aligned_cols=221  Identities=14%  Similarity=0.092  Sum_probs=143.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHH------HHHHhh----------hCCeEEEecCCCH------H
Q 023708           19 VAVITGGARGIGAATAKLFAENG--AHIVIADILDELG------AALAST----------IGGRYIHCDVTKE------E   74 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~------~~~~~~----------~~~~~~~~D~~~~------~   74 (278)
                      ++|||||+|+||++++++|+++|  ++|+++.|..+..      .+..+.          .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7799988865421      111111          2467788999864      2


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           75 DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        75 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      ....+.       ..+|++||||+.....        ..+...+++|+.++..+++.+...    + ..+++++||...+
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~-~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASG----R-AKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhC----C-CceEEEEcccccc
Confidence            333322       3699999999965321        234567789999999988876542    2 3469999998775


Q ss_pred             cCCC----------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH
Q 023708          155 MGGL----------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE  218 (278)
Q Consensus       155 ~~~~----------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  218 (278)
                      ....                ....|+.+|.+.+.+++.+..    .|++++.++||.+.++.....+..    ...-...
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~----~~~~~~~  212 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINS----SDILWRM  212 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCc----hhHHHHH
Confidence            4311                124699999999999876543    389999999999986521110000    0000000


Q ss_pred             HHHHH--hhcCCCC--CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          219 VCKMV--RDSGSLL--RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       219 ~~~~~--~~~~~~~--~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .....  ...+...  ...+.+++|++++++.++.......+|+.+++.++..
T Consensus       213 ~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       213 VKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             HHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence            00000  0111111  1237889999999999987654434588899988654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=4.7e-17  Score=135.98  Aligned_cols=226  Identities=18%  Similarity=0.171  Sum_probs=150.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||.|.||.+++.+|++.|++|++.+.....-.+........+++.|+.|.+.+++++++.     +||.|||.|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-----~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-----KIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-----CCCEEEECc
Confidence            469999999999999999999999999999875443333333322579999999999999998863     799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------CCCCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------GGLASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~Y~~s  166 (278)
                      |......+.     ++..+.++.|+.++..|++++...-     -..+||-||.+.+-           +.....+||.|
T Consensus        76 a~~~VgESv-----~~Pl~Yy~NNv~gTl~Ll~am~~~g-----v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~s  145 (329)
T COG1087          76 ASISVGESV-----QNPLKYYDNNVVGTLNLIEAMLQTG-----VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRS  145 (329)
T ss_pred             cccccchhh-----hCHHHHHhhchHhHHHHHHHHHHhC-----CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhH
Confidence            976554444     7889999999999999888777653     45777755554431           12234589999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEec--------CCCCC-------ChhhHHHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCIS--------PHGVP-------SEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~--------pG~v~-------t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                      |.+.|.+.+.+++.+.   .++..++        |..-.       |.+..-..+...+....    + ..+....+   
T Consensus       146 Klm~E~iL~d~~~a~~---~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~----l-~ifG~DY~T~D  217 (329)
T COG1087         146 KLMSEEILRDAAKANP---FKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDK----L-FIFGDDYDTKD  217 (329)
T ss_pred             HHHHHHHHHHHHHhCC---CcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCce----e-EEeCCCCCCCC
Confidence            9999999999988863   5555442        21111       33333333222221110    0 00011111   


Q ss_pred             -CCCCCCCCHHHHHHHHHHhccCCCCCceee--EEeecCCccc
Q 023708          229 -LLRGRSASIEDVAQAALFLASEEAGFITAH--NLVIDGGYTT  268 (278)
Q Consensus       229 -~~~~~~~~~edva~~~~~l~s~~~~~~tG~--~i~~dgG~~~  268 (278)
                       ...+.++.+.|+|++.+..+.-...  .|+  .+++--|...
T Consensus       218 GT~iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G~  258 (329)
T COG1087         218 GTCIRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNGF  258 (329)
T ss_pred             CCeeeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCce
Confidence             1247789999999998877643322  343  5666555443

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=4.5e-17  Score=137.98  Aligned_cols=220  Identities=15%  Similarity=0.172  Sum_probs=148.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC-------CeE----EEecCCCHHHHHHHHHHHHhhc
Q 023708           20 AVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG-------GRY----IHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~-------~~~----~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ||||||+|-||++++++|++.+. .+++.++++..+-.+..++.       +.+    +.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999984 79999999988888876651       332    468999999999988753    


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                       ++|+|+|.|+.-+.  ++-+   +...+.+++|+.|+.++++++...-     -.++|++||.-+..|.   ..||+||
T Consensus        77 -~pdiVfHaAA~KhV--pl~E---~~p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv~Pt---nvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV--PLME---DNPFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAVNPT---NVMGATK  142 (293)
T ss_dssp             -T-SEEEE------H--HHHC---CCHHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCCC--ChHH---hCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccCCCC---cHHHHHH
Confidence             79999999997533  2333   3457889999999999999998752     5699999999886643   5899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCC--hhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPS--EMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ...+.++.+.+....+.+.++.+|+-|-|-.  ...-+.|.+.+...+. .       .-+.+...+-+.+++|.++.++
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~P-l-------TvT~p~mtRffmti~EAv~Lvl  214 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGP-L-------TVTDPDMTRFFMTIEEAVQLVL  214 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSS-E-------EECETT-EEEEE-HHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCc-c-------eeCCCCcEEEEecHHHHHHHHH
Confidence            9999999999988877789999999887753  2222333222221110 0       0001111245689999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..+.-.   ..|+.+.+|=|...
T Consensus       215 ~a~~~~---~~geifvl~mg~~v  234 (293)
T PF02719_consen  215 QAAALA---KGGEIFVLDMGEPV  234 (293)
T ss_dssp             HHHHH-----TTEEEEE---TCE
T ss_pred             HHHhhC---CCCcEEEecCCCCc
Confidence            887533   35888988877664

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.70  E-value=1.7e-15  Score=145.32  Aligned_cols=226  Identities=17%  Similarity=0.118  Sum_probs=151.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecch--HHHHHHHh---hhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAEN--GAHIVIADILD--ELGAALAS---TIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~--~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++|+||||||+|.||++++++|+++  |++|++.+|..  +....+..   ..++.++.+|++|.+.+.+++..     
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence            45689999999999999999999998  68898888742  22222211   12467889999998877766532     


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------  157 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------  157 (278)
                      .++|+|||+|+......     ..++..+.+++|+.++..+++++...    +..+++|++||...+...          
T Consensus        79 ~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         79 EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCccccccCccc
Confidence            37999999999753221     11334577899999999988876542    224689999998654211          


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc-CCC---
Q 023708          158 ----LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-GSL---  229 (278)
Q Consensus       158 ----~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  229 (278)
                          .....|+.+|.+.+.+++.+..++   ++++..++|+.+..+.....        ..-+.-........ ..+   
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~--------~~i~~~~~~a~~g~~i~i~g~  218 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--------KLIPKFILLAMQGKPLPIHGD  218 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcc--------cHHHHHHHHHhCCCCeEEecC
Confidence                123479999999999999887764   78899999988876542100        00000011111100 000   


Q ss_pred             --CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 --LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 --~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                        ....++.++|+|+++..++...   ..|..+++.++..+
T Consensus       219 g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        219 GSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence              1134688999999999888543   23678888776543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.69  E-value=2.9e-15  Score=136.52  Aligned_cols=213  Identities=15%  Similarity=0.095  Sum_probs=140.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH----HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE----LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++||||||+|.||++++++|+++|++|++++|...    .........++.++..|+.+..     +       .++|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D  185 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEVD  185 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCCC
Confidence            5688999999999999999999999999999876421    1111111223567778886642     1       1589


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC---------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---------------  156 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------  156 (278)
                      +|||+|+......  .   .++..+.+++|+.++.++++++...    +  .++|++||...+..               
T Consensus       186 ~ViHlAa~~~~~~--~---~~~p~~~~~~Nv~gt~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        186 QIYHLACPASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             EEEEeeeecchhh--h---hcCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECChHHhCCCCCCCCCccccccCC
Confidence            9999998653211  1   1234678999999999999887643    2  38999999876531               


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH----HHHHhhhccCCCCHHHHHHHHhhcC-CC-
Q 023708          157 -GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV----NAYRKYLGKADMKPEEVCKMVRDSG-SL-  229 (278)
Q Consensus       157 -~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~-  229 (278)
                       ......|+.+|.+.+.+++.+...+   ++++..+.|+.+..+...    ...          +.-+........ .+ 
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v----------~~~i~~~l~~~~i~i~  321 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVV----------SNFVAQALRKEPLTVY  321 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchH----------HHHHHHHHcCCCcEEe
Confidence             1113469999999999998876654   688888888776654310    011          001111111110 00 


Q ss_pred             ----CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 ----LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ----~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          ..+.+..++|+|++++.++...   ..| .+++.+|...
T Consensus       322 g~G~~~rdfi~V~Dva~ai~~a~e~~---~~g-~yNIgs~~~~  360 (442)
T PLN02206        322 GDGKQTRSFQFVSDLVEGLMRLMEGE---HVG-PFNLGNPGEF  360 (442)
T ss_pred             CCCCEEEeEEeHHHHHHHHHHHHhcC---CCc-eEEEcCCCce
Confidence                0124788999999999888543   233 6888776543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.69  E-value=1.3e-15  Score=132.95  Aligned_cols=217  Identities=16%  Similarity=0.166  Sum_probs=138.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh--hcCCccEEEECC
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS--WKGQLDIMFNNA   97 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~g~id~li~na   97 (278)
                      +|||||+|.||++++++|++.|++++++.|..+......     ....+|+.|..+.+.+++.+.+  .++++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-----NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-----hhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            799999999999999999999997666555432211111     1234677776666666655542  345799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~s  166 (278)
                      |.....    +..   ....+++|+.++.++++++...      ..++|++||...+...           .+...|+.+
T Consensus        77 ~~~~~~----~~~---~~~~~~~n~~~t~~ll~~~~~~------~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  143 (308)
T PRK11150         77 ACSSTT----EWD---GKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYS  143 (308)
T ss_pred             eecCCc----CCC---hHHHHHHHHHHHHHHHHHHHHc------CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHH
Confidence            864321    112   2346899999999998887542      2369999998764321           123579999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCH--HHH-HHHHhhcC-CC------CCCCCCC
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKP--EEV-CKMVRDSG-SL------LRGRSAS  236 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~-~~------~~~~~~~  236 (278)
                      |.+.+.+++.+..+.   ++++..++|+.+..+.....       .....  ... ........ .+      ..+.++.
T Consensus       144 K~~~E~~~~~~~~~~---~~~~~~lR~~~vyG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~  213 (308)
T PRK11150        144 KFLFDEYVRQILPEA---NSQICGFRYFNVYGPREGHK-------GSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVY  213 (308)
T ss_pred             HHHHHHHHHHHHHHc---CCCEEEEeeeeecCCCCCCC-------CccchhHHHHHHHHhcCCCCEEecCCCceeeeeee
Confidence            999999988876553   78888888887766532100       00000  000 11111110 00      1245689


Q ss_pred             HHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          237 IEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++|++++++.++...   . +..+++-+|..+
T Consensus       214 v~D~a~a~~~~~~~~---~-~~~yni~~~~~~  241 (308)
T PRK11150        214 VGDVAAVNLWFWENG---V-SGIFNCGTGRAE  241 (308)
T ss_pred             HHHHHHHHHHHHhcC---C-CCeEEcCCCCce
Confidence            999999998887643   2 348888777643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.69  E-value=1.9e-15  Score=135.18  Aligned_cols=224  Identities=17%  Similarity=0.145  Sum_probs=147.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+|++|||||+|.||+++++.|.++|++|++++|....... .......++.+|+++.+.+..+++       ++|+|||
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih   91 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-EDMFCHEFHLVDLRVMENCLKVTK-------GVDHVFN   91 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc-cccccceEEECCCCCHHHHHHHHh-------CCCEEEE
Confidence            56889999999999999999999999999999885432110 011124678899999887766654       5899999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------------CCC
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------------GGL  158 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------------~~~  158 (278)
                      +|+........ .   .+....+..|+.++.++++++...    + .+++|++||...+.                 +..
T Consensus        92 ~Aa~~~~~~~~-~---~~~~~~~~~N~~~t~nll~aa~~~----~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~  162 (370)
T PLN02695         92 LAADMGGMGFI-Q---SNHSVIMYNNTMISFNMLEAARIN----G-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAE  162 (370)
T ss_pred             cccccCCcccc-c---cCchhhHHHHHHHHHHHHHHHHHh----C-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCC
Confidence            99865321111 1   122345678999999988876532    2 46899999975432                 122


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCC-------C
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSL-------L  230 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~  230 (278)
                      ....|+.+|.+.+.+++.++..+   ++++..++|+.+..|...-     .......+..+ ........++       .
T Consensus       163 p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~  234 (370)
T PLN02695        163 PQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTW-----KGGREKAPAAFCRKALTSTDEFEMWGDGKQ  234 (370)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCc-----cccccccHHHHHHHHHcCCCCeEEeCCCCe
Confidence            34489999999999998877654   7999999999887763110     00000001111 1111100110       1


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       231 ~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ...++.++|++++++.++...    .+..+++-+|..+
T Consensus       235 ~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        235 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             EEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence            235689999999999887543    2456788766543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.69  E-value=1.6e-15  Score=132.22  Aligned_cols=217  Identities=22%  Similarity=0.232  Sum_probs=147.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc-cEEEECCc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL-DIMFNNAG   98 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i-d~li~nag   98 (278)
                      +|||||+|.||++++++|.++|++|+.++|.........  ..+.++.+|+++.+.+.+.++       .. |.+||+|+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih~aa   73 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAK-------GVPDAVIHLAA   73 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHh-------cCCCEEEEccc
Confidence            999999999999999999999999999998765443332  346688899999865555554       34 99999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCc--hhhh
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASH--AYSL  165 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~--~Y~~  165 (278)
                      ....+...   .. +....+++|+.++.++++++..    .+ ..++|+.||.....+.           +..+  .|+.
T Consensus        74 ~~~~~~~~---~~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~  144 (314)
T COG0451          74 QSSVPDSN---AS-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGV  144 (314)
T ss_pred             cCchhhhh---hh-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHH
Confidence            76332111   11 4567899999999999998887    12 5689996665544321           1111  4999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCC-------CCCCCCHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-------RGRSASIE  238 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~e  238 (278)
                      +|.+.+.++.....   ..++.+..+.|+.+..+.....+..     .....-............       ...+..++
T Consensus       145 sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         145 SKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSS-----GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             HHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCc-----CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence            99999999999888   3479999999987766543221000     000110111111111001       12367899


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      |++++++.++......    .+++.++.
T Consensus       217 D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         217 DVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            9999999999765433    77777764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.69  E-value=2.8e-15  Score=130.84  Aligned_cols=222  Identities=17%  Similarity=0.147  Sum_probs=140.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           20 AVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +|||||+|.||.++++.|.++|+ .|++++|..... .+.+ .....+..|+.+.+.++.+.+.   .++++|+|||+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~-~~~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN-LADLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh-hhheeeeccCcchhHHHHHHhh---ccCCCCEEEECcc
Confidence            68999999999999999999998 688777653221 1111 1123566788887766665542   3457999999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~sK  167 (278)
                      ....       ..++.+..+++|+.++.++++++...      ..++|++||...+..           ..+...|+.+|
T Consensus        76 ~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~~~------~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK  142 (314)
T TIGR02197        76 CSDT-------TETDGEYMMENNYQYSKRLLDWCAEK------GIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSK  142 (314)
T ss_pred             ccCc-------cccchHHHHHHHHHHHHHHHHHHHHh------CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHH
Confidence            6421       12456778899999999999887653      247999999765431           11345799999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-C-----------CCCCCC
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-L-----------LRGRSA  235 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~  235 (278)
                      .+.+.+++....+.. .++++..+.|+.+..+......  .  ...+-+.-.......... +           ..+.+.
T Consensus       143 ~~~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       143 FLFDQYVRRRVLPEA-LSAQVVGLRYFNVYGPREYHKG--K--MASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHhHhhc-cCCceEEEEEeeccCCCCCCCC--C--cccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            999999986443321 2567788888776655311000  0  000000000111100000 0           013578


Q ss_pred             CHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          236 SIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..+|+++++..++..    ..+..+++-++..+
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~~  246 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRAR  246 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCCc
Confidence            899999999999865    23558888777654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.67  E-value=3.7e-15  Score=130.60  Aligned_cols=208  Identities=14%  Similarity=0.091  Sum_probs=139.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +++||||+|.||++++++|+++|++|++.+|+.+....+. ..++.++.+|++|.+++.++++       ++|+|||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-------GVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-------CCCEEEECCC
Confidence            6999999999999999999999999999999865543332 2367899999999998887775       6899999875


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      .. .         .+.....++|+.+..++++++...    + -.++|++||..+.. . +...|..+|...+.+.+.  
T Consensus        74 ~~-~---------~~~~~~~~~~~~~~~~l~~aa~~~----g-vkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~~--  134 (317)
T CHL00194         74 SR-P---------SDLYNAKQIDWDGKLALIEAAKAA----K-IKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLKK--  134 (317)
T ss_pred             CC-C---------CCccchhhhhHHHHHHHHHHHHHc----C-CCEEEEeccccccc-c-CCChHHHHHHHHHHHHHH--
Confidence            32 1         112345677888888887776643    2 45899999865432 1 234688889888776542  


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAH  258 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~  258 (278)
                           .+++...++|+.+...+...........   .+.    .... ...+ ..++.++|+|++++.++..+.  ..|+
T Consensus       135 -----~~l~~tilRp~~~~~~~~~~~~~~~~~~---~~~----~~~~-~~~~-~~~i~v~Dva~~~~~~l~~~~--~~~~  198 (317)
T CHL00194        135 -----SGIPYTIFRLAGFFQGLISQYAIPILEK---QPI----WITN-ESTP-ISYIDTQDAAKFCLKSLSLPE--TKNK  198 (317)
T ss_pred             -----cCCCeEEEeecHHhhhhhhhhhhhhccC---Cce----EecC-CCCc-cCccCHHHHHHHHHHHhcCcc--ccCc
Confidence                 4788899999855322211110000000   000    0000 0001 246788999999999886432  3478


Q ss_pred             EEeecCCcccC
Q 023708          259 NLVIDGGYTTG  269 (278)
Q Consensus       259 ~i~~dgG~~~~  269 (278)
                      .+++-|+..+.
T Consensus       199 ~~ni~g~~~~s  209 (317)
T CHL00194        199 TFPLVGPKSWN  209 (317)
T ss_pred             EEEecCCCccC
Confidence            99998886543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.67  E-value=3.9e-15  Score=135.48  Aligned_cols=212  Identities=15%  Similarity=0.097  Sum_probs=139.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH----HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDE----LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+++|||||+|.||++++++|+++|++|++++|...    .........++.++..|+.+..     +       .++|+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D~  187 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVDQ  187 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCCE
Confidence            467999999999999999999999999999887421    1111111123556777876542     1       25899


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------------  156 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------  156 (278)
                      |||+|+.......  .   .+....+++|+.++.++++++...      ..++|++||...+..                
T Consensus       188 ViHlAa~~~~~~~--~---~~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p  256 (436)
T PLN02166        188 IYHLACPASPVHY--K---YNPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEVYGDPLEHPQKETYWGNVNP  256 (436)
T ss_pred             EEECceeccchhh--c---cCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHHhCCCCCCCCCccccccCCC
Confidence            9999986532111  1   234678999999999999887653      238999999875531                


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH----HHHHhhhccCCCCHHHHHHHHhhcCC-C--
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV----NAYRKYLGKADMKPEEVCKMVRDSGS-L--  229 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~--  229 (278)
                      ......|+.+|.+.+.+++.+.+.+   ++++..+.|+.+..+...    ..+.          .-+......... +  
T Consensus       257 ~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~----------~~i~~~l~~~~i~v~g  323 (436)
T PLN02166        257 IGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVS----------NFVAQTIRKQPMTVYG  323 (436)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHH----------HHHHHHhcCCCcEEeC
Confidence            1123469999999999999887654   688888888777665311    1110          001111111000 0  


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 ---LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ---~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                         ..+.++.++|+++++..++...   ..| .+++-+|..+
T Consensus       324 ~g~~~rdfi~V~Dva~ai~~~~~~~---~~g-iyNIgs~~~~  361 (436)
T PLN02166        324 DGKQTRSFQYVSDLVDGLVALMEGE---HVG-PFNLGNPGEF  361 (436)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcC---CCc-eEEeCCCCcE
Confidence               1235789999999999888533   223 7888766543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.66  E-value=6.8e-15  Score=126.92  Aligned_cols=197  Identities=17%  Similarity=0.101  Sum_probs=134.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||.+++++|.++|++|+++.|.                .+|+.+.+++.++++..     ++|++||+||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~-----~~d~vi~~a~   59 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAI-----RPDAVVNTAA   59 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhC-----CCCEEEECCc
Confidence            37999999999999999999999999998885                37999999998888642     5899999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~sK  167 (278)
                      .....     ......+..+++|+.++..+++++...      +.++|++||...+.+           ......|+.+|
T Consensus        60 ~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K  128 (287)
T TIGR01214        60 YTDVD-----GAESDPEKAFAVNALAPQNLARAAARH------GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSK  128 (287)
T ss_pred             ccccc-----ccccCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHH
Confidence            64221     111345678899999999998886532      248999999764322           11245799999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH-----HHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV-----NAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      .+.+.+++.+       +.++..++|+.+..+...     ..........  .       +..... ....+...+|+++
T Consensus       129 ~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~--~-------~~~~~~-~~~~~v~v~Dva~  191 (287)
T TIGR01214       129 LAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGE--E-------LRVVDD-QIGSPTYAKDLAR  191 (287)
T ss_pred             HHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCC--C-------ceEecC-CCcCCcCHHHHHH
Confidence            9999888765       357889999988765421     1111000000  0       000000 1134567899999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ++..++....  .-+..+++-++.
T Consensus       192 a~~~~~~~~~--~~~~~~ni~~~~  213 (287)
T TIGR01214       192 VIAALLQRLA--RARGVYHLANSG  213 (287)
T ss_pred             HHHHHHhhcc--CCCCeEEEECCC
Confidence            9999985431  124456665544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=1.1e-14  Score=130.90  Aligned_cols=214  Identities=12%  Similarity=0.073  Sum_probs=141.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH------HHHh-hhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA------ALAS-TIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~------~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+++++|||||+|+||++++++|+++|++|+++.|+.....      +... ..++.++.+|++|.+++.++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            45779999999999999999999999999999999764321      1111 124778999999999999988743   1


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||++....  .        ....+++|+.+..++++++..    .+ .+++|++||.....+   ...|..+|
T Consensus       135 ~~~D~Vi~~aa~~~~--~--------~~~~~~vn~~~~~~ll~aa~~----~g-v~r~V~iSS~~v~~p---~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRTG--G--------VKDSWKIDYQATKNSLDAGRE----VG-AKHFVLLSAICVQKP---LLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCCC--C--------CccchhhHHHHHHHHHHHHHH----cC-CCEEEEEeeccccCc---chHHHHHH
Confidence            169999999884311  1        012346788888877776643    22 568999999876432   34688899


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ...+...+.     ...+++...++|+.+..++.. .+. .... +.+..    .. .....+....+..+|+|++++.+
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-~~~-~~~~-g~~~~----~~-GdG~~~~~~~I~v~DlA~~i~~~  263 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-QVE-IVKD-GGPYV----MF-GDGKLCACKPISEADLASFIADC  263 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-HHH-hhcc-CCceE----Ee-cCCcccccCceeHHHHHHHHHHH
Confidence            988887654     235899999999877543221 110 0000 00000    00 00000111247889999999988


Q ss_pred             ccCCCCCceeeEEeecC
Q 023708          248 ASEEAGFITAHNLVIDG  264 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dg  264 (278)
                      +.++.  ..|+.+++-|
T Consensus       264 ~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        264 VLDES--KINKVLPIGG  278 (390)
T ss_pred             HhCcc--ccCCEEEcCC
Confidence            85432  3478888876

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.64  E-value=1.1e-14  Score=126.68  Aligned_cols=210  Identities=16%  Similarity=0.121  Sum_probs=139.6

Q ss_pred             EEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCccC
Q 023708           21 VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGIS  100 (278)
Q Consensus        21 lVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~~  100 (278)
                      |||||+|.||.++++.|++.|+.|+++.+.               ..+|+++.++++++++.     .++|+|||+|+..
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~-----~~~d~Vih~A~~~   60 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAK-----EKPTYVILAAAKV   60 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhc-----cCCCEEEEeeeee
Confidence            699999999999999999999988765432               24899999988888765     2689999999864


Q ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----------------CCCchhh
Q 023708          101 GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------------LASHAYS  164 (278)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------------~~~~~Y~  164 (278)
                      ...    ....++....+++|+.++..+++++...    + .+++|++||...+.+.                |....|+
T Consensus        61 ~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  131 (306)
T PLN02725         61 GGI----HANMTYPADFIRENLQIQTNVIDAAYRH----G-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYA  131 (306)
T ss_pred             ccc----chhhhCcHHHHHHHhHHHHHHHHHHHHc----C-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHH
Confidence            211    0111234567889999999988887753    2 4589999997653211                1122499


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHH----Hhhc-------CCCCCCC
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM----VRDS-------GSLLRGR  233 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~  233 (278)
                      .+|.+.+.+.+.+..++   ++++..+.|+.+..+.... .   ......-+..+...    ....       .......
T Consensus       132 ~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~-~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        132 IAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNF-H---PENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCC-C---CCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            99999999998887665   7889999998887663210 0   00000001111111    0000       0012346


Q ss_pred             CCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       234 ~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++.++|++++++.++....   .+..+++.+|..+.
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s  237 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVT  237 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence            8999999999999986432   23456887776644

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.58  E-value=2e-14  Score=121.44  Aligned_cols=151  Identities=22%  Similarity=0.282  Sum_probs=118.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++.||||||.|.||.+++.+|.++|+.|++++..    .+.+..+....    .+.+++.|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999998753    22232222221    3778999999999999999875     


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------CC
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------GG  157 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~  157 (278)
                      ++|.|+|-|+......+.     +.....++.|+.+++.++..+..+    + -..+|+.||...+-           +.
T Consensus        77 ~fd~V~Hfa~~~~vgeS~-----~~p~~Y~~nNi~gtlnlLe~~~~~----~-~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGESM-----ENPLSYYHNNIAGTLNLLEVMKAH----N-VKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccchhh-----hCchhheehhhhhHHHHHHHHHHc----C-CceEEEecceeeecCcceeeccCcCCC
Confidence            699999999987554333     555889999999999987766554    3 46899988877652           11


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHHC
Q 023708          158 -LASHAYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       158 -~~~~~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                       .+...|+.+|.+++...+.+...+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence             2456899999999999999887764

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.57  E-value=4e-14  Score=123.06  Aligned_cols=145  Identities=16%  Similarity=0.143  Sum_probs=106.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|.||++++++|.++| +|++++|...            .+..|++|.+++.++++..     ++|+|||+|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa   63 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKI-----RPDVIVNAAA   63 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhc-----CCCEEEECCc
Confidence            59999999999999999999999 7888877531            3457999999998888742     6899999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~sK  167 (278)
                      ......     ..++.+..+++|+.++.++++++...      ..++|++||...+-+           ..+...|+.+|
T Consensus        64 ~~~~~~-----~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK  132 (299)
T PRK09987         64 HTAVDK-----AESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETK  132 (299)
T ss_pred             cCCcch-----hhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHH
Confidence            753321     11334667889999999998877653      247999999654321           11234799999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      .+.+.+++.+..       +...++|+.+..+
T Consensus       133 ~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        133 LAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHhCC-------CEEEEecceecCC
Confidence            999999876532       2356666666544

>PRK05865 hypothetical protein; Provisional

Probab=99.57  E-value=9.2e-14  Score=133.91  Aligned_cols=187  Identities=15%  Similarity=0.142  Sum_probs=129.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +++||||+|+||++++++|+++|++|++++|.....  .  ..++.++.+|++|.+++.++++       ++|+|||+|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~--~~~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa   70 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W--PSSADFIAADIRDATAVESAMT-------GADVVAHCAW   70 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c--ccCceEEEeeCCCHHHHHHHHh-------CCCEEEECCC
Confidence            599999999999999999999999999999874321  1  1246788999999999888775       5899999997


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      ....              .+++|+.++.++++++.    +.+ .+++|++||..              |.+.+.+++.  
T Consensus        71 ~~~~--------------~~~vNv~GT~nLLeAa~----~~g-vkr~V~iSS~~--------------K~aaE~ll~~--  115 (854)
T PRK05865         71 VRGR--------------NDHINIDGTANVLKAMA----ETG-TGRIVFTSSGH--------------QPRVEQMLAD--  115 (854)
T ss_pred             cccc--------------hHHHHHHHHHHHHHHHH----HcC-CCeEEEECCcH--------------HHHHHHHHHH--
Confidence            5311              46789999888776654    323 46899999864              8888776642  


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAH  258 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~  258 (278)
                           .++++..+.|+.+..+.............         ............++.++|++++++.++....  ..|.
T Consensus       116 -----~gl~~vILRp~~VYGP~~~~~i~~ll~~~---------v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~gg  179 (854)
T PRK05865        116 -----CGLEWVAVRCALIFGRNVDNWVQRLFALP---------VLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSG  179 (854)
T ss_pred             -----cCCCEEEEEeceEeCCChHHHHHHHhcCc---------eeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCC
Confidence                 37899999999988764322221111000         0000000001247899999999998874321  2345


Q ss_pred             EEeecCCcc
Q 023708          259 NLVIDGGYT  267 (278)
Q Consensus       259 ~i~~dgG~~  267 (278)
                      .+++-+|..
T Consensus       180 vyNIgsg~~  188 (854)
T PRK05865        180 PVNLAAPGE  188 (854)
T ss_pred             eEEEECCCc
Confidence            688877664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.7e-13  Score=130.13  Aligned_cols=223  Identities=18%  Similarity=0.100  Sum_probs=139.5

Q ss_pred             EEEEeCCCChhHHHHHHHHH--HcCCeEEEEecchHH--HHHHHhh---hCCeEEEecCCCHHH--HHHHHHHHHhhcCC
Q 023708           19 VAVITGGARGIGAATAKLFA--ENGAHIVIADILDEL--GAALAST---IGGRYIHCDVTKEED--VESAVRLAVSWKGQ   89 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~--~~g~~Vi~~~r~~~~--~~~~~~~---~~~~~~~~D~~~~~~--i~~~~~~~~~~~g~   89 (278)
                      ++|||||+|.||++++++|+  +.|++|++++|....  ...+...   .++.++.+|++|.+.  ..+.++.+    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  589999999986432  2222221   246788899998531  01112222    37


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------  157 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------  157 (278)
                      +|+|||+||.....        .......++|+.++..+++++...    + ..++|++||...+...            
T Consensus        78 ~D~Vih~Aa~~~~~--------~~~~~~~~~nv~gt~~ll~~a~~~----~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         78 IDHVVHLAAIYDLT--------ADEEAQRAANVDGTRNVVELAERL----Q-AATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             CCEEEECceeecCC--------CCHHHHHHHHhHHHHHHHHHHHhc----C-CCeEEEEeccccccCccCccccccchhh
Confidence            99999999965321        123456789999999888876542    2 4689999998764211            


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC---CC----
Q 023708          158 -LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG---SL----  229 (278)
Q Consensus       158 -~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----  229 (278)
                       .....|+.+|...+.+++.      ..++++..++|+.+..+............ ..-....... ....   +.    
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~  216 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGP-YYFFKVLAKL-AKLPSWLPMVGPD  216 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcH-HHHHHHHHHh-ccCCcccccccCC
Confidence             1124699999999998863      24799999999988664211000000000 0000000000 0000   00    


Q ss_pred             -CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 -LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 -~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                       ....++.++|+++++..++...  ...|+.+++-++...
T Consensus       217 ~~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~  254 (657)
T PRK07201        217 GGRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQ  254 (657)
T ss_pred             CCeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCC
Confidence             0123577899999999988533  356889999876543

>PLN02996 fatty acyl-CoA reductase

Probab=99.55  E-value=1.4e-13  Score=127.06  Aligned_cols=226  Identities=13%  Similarity=0.055  Sum_probs=141.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchH------HHH-HHHh-------------------hhCCe
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA---HIVIADILDE------LGA-ALAS-------------------TIGGR   64 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~------~~~-~~~~-------------------~~~~~   64 (278)
                      -+++|+++||||+|.||++++++|++.+.   +|++..|...      +.. ++..                   ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            36899999999999999999999998653   5677766431      111 1110                   02467


Q ss_pred             EEEecCCC-------HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 023708           65 YIHCDVTK-------EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI  137 (278)
Q Consensus        65 ~~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  137 (278)
                      ++.+|+++       .+.++++++       .+|+|||+|+.....        ++.+..+++|+.++.++++++...  
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~--------~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD--------ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc--------CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            88899983       343445443       699999999975321        345778999999999998877653  


Q ss_pred             ccCCCcEEEEecCchhhcCC---------C--------------------------------------------------
Q 023708          138 EGQRKGSIICTSSSAAIMGG---------L--------------------------------------------------  158 (278)
Q Consensus       138 ~~~~~~~iv~vsS~~~~~~~---------~--------------------------------------------------  158 (278)
                        .+..++|++||...+...         +                                                  
T Consensus       151 --~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        151 --VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             --CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence              113589999987654210         0                                                  


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH-HHhhcC------C
Q 023708          159 ---ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK-MVRDSG------S  228 (278)
Q Consensus       159 ---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~  228 (278)
                         ....|+.||++.|.+++..+     .++.+..++|..+.++..... ......- ..+..+.. ......      .
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~-~gwi~~~-~~~~~i~~~~~~g~~~~~~gdg  301 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPF-PGWIEGL-RTIDSVIVGYGKGKLTCFLADP  301 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCC-CCcccch-hhHHHHHHHhccceEeEEecCC
Confidence               11359999999999997542     279999999998876543210 0000000 00011100 001100      0


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCC-CCceeeEEeecCC
Q 023708          229 LLRGRSASIEDVAQAALFLASEEA-GFITAHNLVIDGG  265 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~-~~~tG~~i~~dgG  265 (278)
                      .....++++++++++++.++.... ..-.+..+++..|
T Consensus       302 ~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        302 NSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             CeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            013567899999999988875421 1124677888766

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.55  E-value=6.8e-13  Score=112.95  Aligned_cols=183  Identities=17%  Similarity=0.102  Sum_probs=148.4

Q ss_pred             CcEEEEeCC-CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcC-----
Q 023708           17 GKVAVITGG-ARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKG-----   88 (278)
Q Consensus        17 ~k~vlVtGa-s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g-----   88 (278)
                      ..+|+|.|. +--|++.+|..|-++|+-|+++..+.+..+.+..+..  +.....|..+..++...+.++.+...     
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            468999996 7899999999999999999999998887776665432  55666787776666666666655432     


Q ss_pred             ---------CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcE-EEEecCchhhcCC
Q 023708           89 ---------QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGS-IICTSSSAAIMGG  157 (278)
Q Consensus        89 ---------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~-iv~vsS~~~~~~~  157 (278)
                               .+..||.......+.+|++.++.++|.+.++.|+..++..++.++|+++.+. .+.+ |++.-|+.+....
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~  162 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNP  162 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCC
Confidence                     2456666666555778999999999999999999999999999999998722 2344 5555578788888


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      |....-.+...++.+|++.|++|+.+.+|.|.-++.|.++=.
T Consensus       163 PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  163 PFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            888899999999999999999999999999999998888644

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02778 3,5-epimerase/4-reductase

Probab=99.52  E-value=2.3e-12  Score=111.96  Aligned_cols=194  Identities=15%  Similarity=0.137  Sum_probs=119.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||+|.||+++++.|.++|++|+...                   .|+.+.+.+...++.     .++|+|||+|
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~-----~~~D~ViH~A   65 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDA-----VKPTHVFNAA   65 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHh-----cCCCEEEECC
Confidence            6799999999999999999999999987431                   345566655555543     2689999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------------CCCC
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------------GGLA  159 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------~~~~  159 (278)
                      |......  .+...++..+.+++|+.++.++++++...    + . +.+++||...+.                  +.+.
T Consensus        66 a~~~~~~--~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~  137 (298)
T PLN02778         66 GVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRER----G-L-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT  137 (298)
T ss_pred             cccCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-C-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCC
Confidence            9753211  11223456789999999999999988754    1 2 345555433210                  1112


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEE-ecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNC-ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASI  237 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~-v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  237 (278)
                      ...|+.||.+.+.+++.++..   .++|+.. +.++...   ...+..              ........... +.+...
T Consensus       138 ~s~Yg~sK~~~E~~~~~y~~~---~~lr~~~~~~~~~~~---~~~fi~--------------~~~~~~~~~~~~~s~~yv  197 (298)
T PLN02778        138 GSFYSKTKAMVEELLKNYENV---CTLRVRMPISSDLSN---PRNFIT--------------KITRYEKVVNIPNSMTIL  197 (298)
T ss_pred             CCchHHHHHHHHHHHHHhhcc---EEeeecccCCccccc---HHHHHH--------------HHHcCCCeeEcCCCCEEH
Confidence            247999999999999876532   2444422 1121110   011111              11111100011 337789


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +|++++++.++...   .+| .+++-+|..
T Consensus       198 ~D~v~al~~~l~~~---~~g-~yNigs~~~  223 (298)
T PLN02778        198 DELLPISIEMAKRN---LTG-IYNFTNPGV  223 (298)
T ss_pred             HHHHHHHHHHHhCC---CCC-eEEeCCCCc
Confidence            99999999988543   234 788865554

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.45  E-value=1.1e-11  Score=94.62  Aligned_cols=218  Identities=17%  Similarity=0.157  Sum_probs=148.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~l   93 (278)
                      +-.+++|-|+-+.+|.+|+..|-+++|-|.-++-.+.....     ....+..|-+=.++-+.+++++-+..+  ++|.+
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            44679999999999999999999999999877655432111     112344454444555556666555433  69999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      +|-||.+.....-...-.+..+.++.-.+...-.-.+.+..+++.   .|-+-..+.-.+..+.|++..|+++|+|+++|
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqL  153 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQL  153 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCCCCcccchhHHHHHHHHH
Confidence            999987633211101111233344555555555555555556543   45666666777788899999999999999999


Q ss_pred             HHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          174 ARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       174 ~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++|+.+-.  +.|--+..|.|-..+|||.+.+..+.                     .+..+.+.+.+++..+.-..+.
T Consensus       154 t~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A---------------------DfssWTPL~fi~e~flkWtt~~  212 (236)
T KOG4022|consen  154 TSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA---------------------DFSSWTPLSFISEHFLKWTTET  212 (236)
T ss_pred             HHHhcccccCCCCCceeEEEeeeeccCccccccCCCC---------------------cccCcccHHHHHHHHHHHhccC
Confidence            999998763  45778889999999999987764211                     1245667788888888777666


Q ss_pred             CCCceeeEEee
Q 023708          252 AGFITAHNLVI  262 (278)
Q Consensus       252 ~~~~tG~~i~~  262 (278)
                      .+.-+|..+.+
T Consensus       213 ~RPssGsLlqi  223 (236)
T KOG4022|consen  213 SRPSSGSLLQI  223 (236)
T ss_pred             CCCCCCceEEE
Confidence            67777766655

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.45  E-value=1.2e-12  Score=110.53  Aligned_cols=126  Identities=19%  Similarity=0.259  Sum_probs=104.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      +||||++|-+|.++++.|. .++.|+.++|.+                +|++|.+.+.+++++.     ++|+|||+|++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~-----~PDvVIn~AAy   60 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRET-----RPDVVINAAAY   60 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhh-----CCCEEEECccc
Confidence            9999999999999999999 778999888764                7999999999999875     79999999998


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------CCchhhhhHH
Q 023708          100 SGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------ASHAYSLSKE  168 (278)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~~sK~  168 (278)
                      ....+     -..+.+..+.+|..++.++.+++...      ...+|++||...+-+..           +...||.||.
T Consensus        61 t~vD~-----aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl  129 (281)
T COG1091          61 TAVDK-----AESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKL  129 (281)
T ss_pred             ccccc-----ccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHH
Confidence            64322     22456789999999999999988765      56899999877643322           3448999999


Q ss_pred             HHHHHHHHHH
Q 023708          169 AIIGLARSTA  178 (278)
Q Consensus       169 a~~~l~~~l~  178 (278)
                      +-|..++...
T Consensus       130 ~GE~~v~~~~  139 (281)
T COG1091         130 AGEEAVRAAG  139 (281)
T ss_pred             HHHHHHHHhC
Confidence            9999997764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=1.1e-12  Score=111.09  Aligned_cols=154  Identities=17%  Similarity=0.145  Sum_probs=95.1

Q ss_pred             EeCCCChhHHHHHHHHHHcCC--eEEEEecchHH---HHHHHh---------------hhCCeEEEecCCCHH------H
Q 023708           22 ITGGARGIGAATAKLFAENGA--HIVIADILDEL---GAALAS---------------TIGGRYIHCDVTKEE------D   75 (278)
Q Consensus        22 VtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~---~~~~~~---------------~~~~~~~~~D~~~~~------~   75 (278)
                      ||||+|.||.++..+|++.+.  +|++..|..+.   .+.+.+               ..+++++.+|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999886422   222211               224788999999854      3


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ..++.+       .+|++||||+......        ...+..++|+.|+..+++.+..    .+ ..+++++||.....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~----~~-~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQ----GK-RKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTS----SS----EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHh----cc-CcceEEeccccccC
Confidence            333333       5999999999764443        3345778999999998886662    22 34999999932211


Q ss_pred             --C------------------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCC
Q 023708          156 --G------------------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPS  198 (278)
Q Consensus       156 --~------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t  198 (278)
                        .                  ......|..||...|.+++..+.+.   |+.+..++||.+-+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence              1                  0122479999999999999988764   78899999988755

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.42  E-value=5.9e-12  Score=101.36  Aligned_cols=173  Identities=17%  Similarity=0.137  Sum_probs=124.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      |+|+||+|.+|+.++++|+++|++|++..|++++..+   ..+++++.+|+.|.+++.+.++       +.|.+|+++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-------hcchhhhhhhh
Confidence            6999999999999999999999999999999887666   4568899999999988888776       79999999975


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC---------chhhhhHHHH
Q 023708          100 SGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS---------HAYSLSKEAI  170 (278)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---------~~Y~~sK~a~  170 (278)
                      ...         +             ...++.++..+.+.+ ..++|++||...+...+..         ..|...|...
T Consensus        71 ~~~---------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (183)
T PF13460_consen   71 PPK---------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREA  127 (183)
T ss_dssp             TTT---------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHH
T ss_pred             hcc---------c-------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHH
Confidence            311         1             344556666666544 6799999998877654442         2455555555


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +.+.       ...+++...++|+.+..+....   .....    .       ..   ......++.+|+|++++.++.
T Consensus       128 e~~~-------~~~~~~~~ivrp~~~~~~~~~~---~~~~~----~-------~~---~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  128 EEAL-------RESGLNWTIVRPGWIYGNPSRS---YRLIK----E-------GG---PQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHH-------HHSTSEEEEEEESEEEBTTSSS---EEEES----S-------TS---TTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHH-------HhcCCCEEEEECcEeEeCCCcc---eeEEe----c-------cC---CCCcCcCCHHHHHHHHHHHhC
Confidence            4433       2348999999999987664210   00000    0       00   011346789999999998874

...

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.39  E-value=2.4e-12  Score=111.16  Aligned_cols=198  Identities=16%  Similarity=0.115  Sum_probs=123.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|.||.++.+.|.++|++|+.+.|.                .+|++|.+++.+++++.     ++|+|||+||
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~-----~pd~Vin~aa   60 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAF-----KPDVVINCAA   60 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH-------SEEEE---
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHh-----CCCeEeccce
Confidence            69999999999999999999999999998776                48999999999998865     6999999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~sK  167 (278)
                      ....     +.-.++.+..+++|+.++..+.+.+...      ..++|++||...+-+.           .+...||.+|
T Consensus        61 ~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K  129 (286)
T PF04321_consen   61 YTNV-----DACEKNPEEAYAINVDATKNLAEACKER------GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSK  129 (286)
T ss_dssp             ---H-----HHHHHSHHHHHHHHTHHHHHHHHHHHHC------T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHH
T ss_pred             eecH-----HhhhhChhhhHHHhhHHHHHHHHHHHHc------CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHH
Confidence            7521     1222456789999999999988887753      5699999998765332           1245899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc-----CCCCCCCCCCHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-----GSLLRGRSASIEDVAQ  242 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~edva~  242 (278)
                      ...|..++...    +   +...++++++..+-.....           ..+.......     .....+.....+|+|+
T Consensus       130 ~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~~~~-----------~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~  191 (286)
T PF04321_consen  130 LEGEQAVRAAC----P---NALILRTSWVYGPSGRNFL-----------RWLLRRLRQGEPIKLFDDQYRSPTYVDDLAR  191 (286)
T ss_dssp             HHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHH-----------HHHHHHHHCTSEEEEESSCEE--EEHHHHHH
T ss_pred             HHHHHHHHHhc----C---CEEEEecceecccCCCchh-----------hhHHHHHhcCCeeEeeCCceeCCEEHHHHHH
Confidence            99999887732    1   4556666665444111111           0111111100     0001234467899999


Q ss_pred             HHHHhccCCCC-CceeeEEeecCCc
Q 023708          243 AALFLASEEAG-FITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~-~~tG~~i~~dgG~  266 (278)
                      .+..++..... .-..-.+.+.|..
T Consensus       192 ~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  192 VILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             HHHHHHHhcccccccceeEEEecCc
Confidence            99999865521 1112345555543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.34  E-value=8.8e-11  Score=121.57  Aligned_cols=218  Identities=15%  Similarity=0.109  Sum_probs=137.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC----CeEEEEecchHHHH---HHHhh------------hCCeEEEecCCCH----
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG----AHIVIADILDELGA---ALAST------------IGGRYIHCDVTKE----   73 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g----~~Vi~~~r~~~~~~---~~~~~------------~~~~~~~~D~~~~----   73 (278)
                      .++++||||+|.||.+++++|++++    ++|++..|......   .+...            .++.++.+|++++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    78888888632221   11111            1467888999754    


Q ss_pred             --HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           74 --EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        74 --~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                        +...++.       ..+|++||||+.....     .   .+......|+.++..+++.+...    + ..+++++||.
T Consensus      1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~~-----~---~~~~~~~~nv~gt~~ll~~a~~~----~-~~~~v~vSS~ 1110 (1389)
T TIGR03443      1051 SDEKWSDLT-------NEVDVIIHNGALVHWV-----Y---PYSKLRDANVIGTINVLNLCAEG----K-AKQFSFVSST 1110 (1389)
T ss_pred             CHHHHHHHH-------hcCCEEEECCcEecCc-----c---CHHHHHHhHHHHHHHHHHHHHhC----C-CceEEEEeCe
Confidence              2233322       2699999999865321     1   22334567999999988876532    2 4589999997


Q ss_pred             hhhcC-----------------C-----------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH
Q 023708          152 AAIMG-----------------G-----------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN  203 (278)
Q Consensus       152 ~~~~~-----------------~-----------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~  203 (278)
                      +.+..                 .           .....|+.||.+.+.+++..+.    .|+++..++||.+..+....
T Consensus      1111 ~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1111 SALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             eecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcC
Confidence            65421                 0           0123599999999999876543    38999999999986653211


Q ss_pred             HHHhhhccCCCCHHHHHHHHhh------cCCC-CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          204 AYRKYLGKADMKPEEVCKMVRD------SGSL-LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      .+.        ....+...+..      .+.. ....+.++++++++++.++........+..+++.++.
T Consensus      1187 ~~~--------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1187 ATN--------TDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             CCC--------chhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            100        01111111111      1110 0135678999999999998544322234566666553

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.34  E-value=2.6e-11  Score=105.97  Aligned_cols=225  Identities=17%  Similarity=0.141  Sum_probs=146.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHH---HHHHHh--hhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG--AHIVIADILDEL---GAALAS--TIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~---~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++.+++||||+|.+|++++++|.+++  ..+.+++.....   ..+...  .-.+.++.+|+.|..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            46889999999999999999999998  788888765421   111111  2346788899999999888876       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------  156 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------  156 (278)
                      ++ .+||+|+...     ......+-+..+++|+.|+-+++.++...-     -.++|++||.....+            
T Consensus        76 ~~-~Vvh~aa~~~-----~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-----v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPV-----PDFVENDRDLAMRVNVNGTLNVIEACKELG-----VKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccC-----ccccccchhhheeecchhHHHHHHHHHHhC-----CCEEEEecCceEEeCCeecccCCCCCC
Confidence            56 7888876431     222334678899999999998888887653     568999999887543            


Q ss_pred             CCC--CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhh---hccCCCCHHHHHHHHhhcCCCCC
Q 023708          157 GLA--SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY---LGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       157 ~~~--~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                      .|.  ...|+.||+-.|.+++....   ..+....+++|-.+..|.-.......   ........ .....      --.
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f-~~g~~------~~~  214 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLF-KIGDG------ENL  214 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceE-Eeecc------ccc
Confidence            222  24899999999999987664   34678889999887766543322110   00000000 00000      001


Q ss_pred             CCCCCHHHHHHHHHHh---ccCCCCCceeeEEeecCCccc
Q 023708          232 GRSASIEDVAQAALFL---ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       232 ~~~~~~edva~~~~~l---~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..+...+-++.+.+..   +.......+||.+.+..|...
T Consensus       215 ~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~  254 (361)
T KOG1430|consen  215 NDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPV  254 (361)
T ss_pred             cceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcc
Confidence            2233444444443322   122556789999999888764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.34  E-value=5.7e-12  Score=104.60  Aligned_cols=219  Identities=19%  Similarity=0.107  Sum_probs=150.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHH---------HhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL---------ASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~---------~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++|++||||-+|--|.-+|+.|++.|+.|+...|........         ....+++.+.+|++|...+.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            368999999999999999999999999999887653221111         11112567889999999999999987   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-----------c
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-----------M  155 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~  155 (278)
                        ++|-+.|.|+.....     .+.++.+...+++.+|+++++.+..-.-   ....++..-||..-+           .
T Consensus        78 --~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~---~~~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 --QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILG---EKKTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             --Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhC---CcccEEEecccHHhhcCcccCccccCC
Confidence              799999999865443     4447788899999999999988765543   224677777776643           2


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHC---CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELG---KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      |+.+.++|+++|....-++..+...|.   ..||-+|-=.|.-=.|-.++++......-   ..+..+...-.. ....+
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~I---k~G~q~~l~lGN-ldAkR  223 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARI---KLGLQDKLYLGN-LDAKR  223 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHH---HccccceEEecc-ccccc
Confidence            566778999999999999988887763   44677776666544444444443221000   000000000000 01236


Q ss_pred             CCCCHHHHHHHHHHhccCC
Q 023708          233 RSASIEDVAQAALFLASEE  251 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~  251 (278)
                      .++...|.+++.+.++..+
T Consensus       224 DWG~A~DYVe~mwlmLQq~  242 (345)
T COG1089         224 DWGHAKDYVEAMWLMLQQE  242 (345)
T ss_pred             cccchHHHHHHHHHHHccC
Confidence            6889999999999888644

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.33  E-value=3.3e-11  Score=104.42  Aligned_cols=159  Identities=18%  Similarity=0.144  Sum_probs=113.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHH---HHHHHhhh------------CCeEEEecCC------CHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENG-AHIVIADILDEL---GAALASTI------------GGRYIHCDVT------KEED   75 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~---~~~~~~~~------------~~~~~~~D~~------~~~~   75 (278)
                      +++|+|||+|.||..+.++|+.+- ++|++..|.++.   ...+.+.+            ++.++..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999998764 699998775432   12222111            2667778888      3334


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ..++.+       .+|.+|||++......|+        .+....|+.|+..+++.+.     +++.+.+.+|||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~pY--------s~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVFPY--------SELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccCcH--------HHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeecc
Confidence            444443       599999999977555444        5667789999988887554     23355799999988642


Q ss_pred             CC--------------------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChh
Q 023708          156 GG--------------------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM  200 (278)
Q Consensus       156 ~~--------------------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~  200 (278)
                      ..                    .....|+-||.+.|.+++....    .|.++..+.||.+-.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDS  201 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccC
Confidence            21                    1235799999999999976553    38999999999886543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.33  E-value=1.7e-11  Score=105.80  Aligned_cols=199  Identities=13%  Similarity=0.102  Sum_probs=119.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC-ccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ-LDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~-id~li~na   97 (278)
                      +++||||+|.+|++++++|+++|++|.+..|+.+...    ..++..+.+|+.|.+++.++++.. +...+ +|.+++++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeC
Confidence            3899999999999999999999999999999875432    224567789999999999988643 22235 99999987


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST  177 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  177 (278)
                      +...          +...            ..+.++...++.+ -.+||++||.....+.       ..+...+.+.+..
T Consensus        76 ~~~~----------~~~~------------~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------~~~~~~~~~l~~~  125 (285)
T TIGR03649        76 PPIP----------DLAP------------PMIKFIDFARSKG-VRRFVLLSASIIEKGG-------PAMGQVHAHLDSL  125 (285)
T ss_pred             CCCC----------ChhH------------HHHHHHHHHHHcC-CCEEEEeeccccCCCC-------chHHHHHHHHHhc
Confidence            6321          0000            1123444444443 5799999986543321       1232233222211


Q ss_pred             HHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCcee
Q 023708          178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITA  257 (278)
Q Consensus       178 ~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG  257 (278)
                            .++....++|+++..+..............    .   ....... ....+++++|+|+++..++..+.  ..|
T Consensus       126 ------~gi~~tilRp~~f~~~~~~~~~~~~~~~~~----~---~~~~~g~-~~~~~v~~~Dva~~~~~~l~~~~--~~~  189 (285)
T TIGR03649       126 ------GGVEYTVLRPTWFMENFSEEFHVEAIRKEN----K---IYSATGD-GKIPFVSADDIARVAYRALTDKV--APN  189 (285)
T ss_pred             ------cCCCEEEEeccHHhhhhcccccccccccCC----e---EEecCCC-CccCcccHHHHHHHHHHHhcCCC--cCC
Confidence                  389999999997754432110000000000    0   0000000 11347899999999999986542  224


Q ss_pred             eEEeecCCccc
Q 023708          258 HNLVIDGGYTT  268 (278)
Q Consensus       258 ~~i~~dgG~~~  268 (278)
                      ..+++-|+..+
T Consensus       190 ~~~~l~g~~~~  200 (285)
T TIGR03649       190 TDYVVLGPELL  200 (285)
T ss_pred             CeEEeeCCccC
Confidence            55666665443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.32  E-value=3.2e-11  Score=104.02  Aligned_cols=216  Identities=17%  Similarity=0.032  Sum_probs=119.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      +|||||+|.||.++++.|+++|++|++++|+.+.......     ....|+.. ...       .+...++|+|||+||.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~-~~~-------~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EGYKPWAP-LAE-------SEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----eeeecccc-cch-------hhhcCCCCEEEECCCC
Confidence            6899999999999999999999999999997654322110     01112222 111       1233479999999986


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----------C-CCchhhhhHH
Q 023708          100 SGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------L-ASHAYSLSKE  168 (278)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------~-~~~~Y~~sK~  168 (278)
                      ....   .....+.....+++|+.++..+++++...-   .+...+|+.|+...+...          + ....|+..+.
T Consensus        68 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~---~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~  141 (292)
T TIGR01777        68 PIAD---KRWTEERKQEIRDSRIDTTRALVEAIAAAE---QKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCR  141 (292)
T ss_pred             Cccc---ccCCHHHHHHHHhcccHHHHHHHHHHHhcC---CCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHH
Confidence            4221   223445667788999999888888776431   101234444443322110          0 1112233333


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ..+...+    .+...++.+..++|+.+..+... ..............   .....  ......++.++|+++++..++
T Consensus       142 ~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~---~~~g~--~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       142 DWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLG---GPLGS--GRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             HHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcc---cccCC--CCcccccEeHHHHHHHHHHHh
Confidence            3333322    22345799999999998765311 11000000000000   00000  001245789999999999998


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ....  ..| .+++-++..
T Consensus       212 ~~~~--~~g-~~~~~~~~~  227 (292)
T TIGR01777       212 ENAS--ISG-PVNATAPEP  227 (292)
T ss_pred             cCcc--cCC-ceEecCCCc
Confidence            6432  233 566665544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.32  E-value=2.9e-11  Score=100.40  Aligned_cols=218  Identities=16%  Similarity=0.080  Sum_probs=147.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCeEEEEe-----cchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           18 KVAVITGGARGIGAATAKLFAEN--GAHIVIAD-----ILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~-----r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +.++||||.+.||...++.+...  .++.+..+     .+...+++.....+.++++.|+.++..+..++..     .++
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~i   81 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EEI   81 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----Cch
Confidence            88999999999999999999875  45544432     1233344444444578999999999988887753     389


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------------CC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------GL  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~  158 (278)
                      |.|+|-|+......     +.-+-...++.|+.++..|++.+....    +-.++|++|+...+-.            ..
T Consensus        82 d~vihfaa~t~vd~-----s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvSTdeVYGds~~~~~~~E~s~~n  152 (331)
T KOG0747|consen   82 DTVIHFAAQTHVDR-----SFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVSTDEVYGDSDEDAVVGEASLLN  152 (331)
T ss_pred             hhhhhhHhhhhhhh-----hcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEecccceecCccccccccccccCC
Confidence            99999998653322     224456778899999999998887664    2468999999886531            11


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh------HHHHHhhhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML------VNAYRKYLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      +..+|+++|+|.+++.+++.+.|   |+.+..++-+.|..|-.      .++.+-...   .++-..     ...-...+
T Consensus       153 PtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~---~~~~~i-----~g~g~~~r  221 (331)
T KOG0747|consen  153 PTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMR---GKEYPI-----HGDGLQTR  221 (331)
T ss_pred             CCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHh---CCCcce-----ecCcccce
Confidence            23479999999999999999987   78888887776665532      211110000   000000     00001235


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeec
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVID  263 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~d  263 (278)
                      .+..+||+.+++--.+...   -.|+.+++-
T Consensus       222 s~l~veD~~ea~~~v~~Kg---~~geIYNIg  249 (331)
T KOG0747|consen  222 SYLYVEDVSEAFKAVLEKG---ELGEIYNIG  249 (331)
T ss_pred             eeEeHHHHHHHHHHHHhcC---Cccceeecc
Confidence            6789999999998888652   257777763

>PLN00016 RNA-binding protein; Provisional

Probab=99.30  E-value=1.4e-10  Score=104.24  Aligned_cols=202  Identities=15%  Similarity=0.141  Sum_probs=123.4

Q ss_pred             CCCCcEEEEe----CCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHH----------hhhCCeEEEecCCCHHHHHHH
Q 023708           14 RLTGKVAVIT----GGARGIGAATAKLFAENGAHIVIADILDELGAALA----------STIGGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        14 ~l~~k~vlVt----Gas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~i~~~   79 (278)
                      ....++||||    ||+|.||.+++++|+++|++|++++|.......+.          ...++.++.+|+.|   +.++
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence            3456789999    99999999999999999999999999764322110          11246788888866   3333


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      ++     ..++|+|||+++..                     ..+...+    +....+.+ -.++|++||...+.....
T Consensus       126 ~~-----~~~~d~Vi~~~~~~---------------------~~~~~~l----l~aa~~~g-vkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD---------------------LDEVEPV----ADWAKSPG-LKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             hc-----cCCccEEEeCCCCC---------------------HHHHHHH----HHHHHHcC-CCEEEEEccHhhcCCCCC
Confidence            32     13699999987521                     0122223    33333333 568999999876532211


Q ss_pred             C--------chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc-CCC-
Q 023708          160 S--------HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-GSL-  229 (278)
Q Consensus       160 ~--------~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  229 (278)
                      .        ..+. +|...+.+.+       ..++.+..++|+.+..+.......         ..-........ ..+ 
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~---------~~~~~~~~~~~~i~~~  237 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCE---------EWFFDRLVRGRPVPIP  237 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchH---------HHHHHHHHcCCceeec
Confidence            0        1122 7888877653       247899999999887653211000         00000111100 000 


Q ss_pred             ----CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 ----LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ----~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          ....++.++|+|++++.++...  ...|+.+++-|+..+
T Consensus       238 g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~  278 (378)
T PLN00016        238 GSGIQLTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAV  278 (378)
T ss_pred             CCCCeeeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCcc
Confidence                1124678999999999998643  235788998887643

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.27  E-value=1.4e-11  Score=102.57  Aligned_cols=102  Identities=12%  Similarity=0.095  Sum_probs=79.6

Q ss_pred             cEEEEeCC-CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGG-ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGa-s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .+=.||.. |||||+++|++|+++|++|+++++... .   . ..  ....+|+++.+++.++++++.+.++++|+||||
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l---~-~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L---K-PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c---c-cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            44567765 679999999999999999999876321 1   1 10  124589999999999999999999999999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK  130 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  130 (278)
                      ||+. ...++.+.+.++|++.+.   .+.+.+.+
T Consensus        88 Agv~-d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        88 MAVS-DYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CEec-cccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9986 456788899999997744   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=1.2e-10  Score=106.93  Aligned_cols=161  Identities=16%  Similarity=0.238  Sum_probs=118.1

Q ss_pred             CcEEE----EeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           17 GKVAV----ITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        17 ~k~vl----VtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +..+|    |+||++|+|.++++.|...|++|+.+.+.....              +.              ....+++.
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~--------------~~--------------~~~~~~~~   85 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW--------------AA--------------GWGDRFGA   85 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc--------------cc--------------CcCCcccE
Confidence            44555    888899999999999999999999876543310              00              01124555


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      +|+-+-..        .+.+++        .+.+.+++.+++.|..   .|+||+++|.....   ....|+++|+++.+
T Consensus        86 ~~~d~~~~--------~~~~~l--------~~~~~~~~~~l~~l~~---~griv~i~s~~~~~---~~~~~~~akaal~g  143 (450)
T PRK08261         86 LVFDATGI--------TDPADL--------KALYEFFHPVLRSLAP---CGRVVVLGRPPEAA---ADPAAAAAQRALEG  143 (450)
T ss_pred             EEEECCCC--------CCHHHH--------HHHHHHHHHHHHhccC---CCEEEEEccccccC---CchHHHHHHHHHHH
Confidence            55433211        011322        2444677778887754   57999999987653   33469999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++++++|+ +.+++++.|.|+.                                       ..+++++.++.|++++..
T Consensus       144 l~rsla~E~-~~gi~v~~i~~~~---------------------------------------~~~~~~~~~~~~l~s~~~  183 (450)
T PRK08261        144 FTRSLGKEL-RRGATAQLVYVAP---------------------------------------GAEAGLESTLRFFLSPRS  183 (450)
T ss_pred             HHHHHHHHh-hcCCEEEEEecCC---------------------------------------CCHHHHHHHHHHhcCCcc
Confidence            999999999 6799999998774                                       157788889999999888


Q ss_pred             CCceeeEEeecCCcc
Q 023708          253 GFITAHNLVIDGGYT  267 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~  267 (278)
                      .|.+|+.+.++++..
T Consensus       184 a~~~g~~i~~~~~~~  198 (450)
T PRK08261        184 AYVSGQVVRVGAADA  198 (450)
T ss_pred             CCccCcEEEecCCcc
Confidence            999999999998865

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.25  E-value=2e-10  Score=107.65  Aligned_cols=120  Identities=15%  Similarity=0.154  Sum_probs=84.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchH------HHH-HHH---------h----------hhCCeE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA---HIVIADILDE------LGA-ALA---------S----------TIGGRY   65 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~------~~~-~~~---------~----------~~~~~~   65 (278)
                      +++|+++||||+|.||+.++++|++.+.   +|++..|...      +.. ++.         +          ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            6899999999999999999999998764   5677776421      111 110         0          113567


Q ss_pred             EEecCCCH------HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc
Q 023708           66 IHCDVTKE------EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG  139 (278)
Q Consensus        66 ~~~D~~~~------~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  139 (278)
                      +..|++++      +..+.+.+       .+|+|||+|+.....        ++.+..+++|+.++.++++.+...    
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~--------~~~~~a~~vNV~GT~nLLelA~~~----  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD--------ERYDVAIDINTRGPCHLMSFAKKC----  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccc--------cCHHHHHHHHHHHHHHHHHHHHHc----
Confidence            88999986      23333332       599999999875321        456788999999999998877653    


Q ss_pred             CCCcEEEEecCchh
Q 023708          140 QRKGSIICTSSSAA  153 (278)
Q Consensus       140 ~~~~~iv~vsS~~~  153 (278)
                      +...++|++||...
T Consensus       258 ~~lk~fV~vSTayV  271 (605)
T PLN02503        258 KKLKLFLQVSTAYV  271 (605)
T ss_pred             CCCCeEEEccCcee
Confidence            11357899888654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.3e-09  Score=87.16  Aligned_cols=167  Identities=12%  Similarity=0.081  Sum_probs=114.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +++||||+ |+|.++++.|+++|++|++++|+.+....+...+    .+.++.+|++|.+++.++++.+.+.+|++|.+|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            68999998 7777899999999999999999877766554422    356778999999999999999999899999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      +..-..                       ++-.+..++...-.+.+ .-+++++=...+..+                  
T Consensus        81 ~~vh~~-----------------------~~~~~~~~~~~~gv~~~-~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         81 AWIHSS-----------------------AKDALSVVCRELDGSSE-TYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             Eecccc-----------------------chhhHHHHHHHHccCCC-CceEEEEeCCcCCch------------------
Confidence            775322                       33344454444433222 447777643332111                  


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC-CC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE-AG  253 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~-~~  253 (278)
                      +.....++...+...-|..|.+...-                              ..|+.+=+||++.++...... ..
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~------------------------------~~rwlt~~ei~~gv~~~~~~~~~~  168 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDT------------------------------YSRWLTHEEISDGVIKAIESDADE  168 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCC------------------------------ccccCchHHHHHHHHHHHhcCCCe
Confidence            11222333345667777888774331                              257889999999999887544 44


Q ss_pred             Cceee
Q 023708          254 FITAH  258 (278)
Q Consensus       254 ~~tG~  258 (278)
                      .+.|+
T Consensus       169 ~~~g~  173 (177)
T PRK08309        169 HVVGT  173 (177)
T ss_pred             EEEEE
Confidence            55554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.22  E-value=4.5e-10  Score=108.07  Aligned_cols=142  Identities=17%  Similarity=0.149  Sum_probs=101.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ..+++|||||+|.||+++++.|.++|++|..                   ...|++|.+.+.+.+++.     ++|+|||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~-----~pd~Vih  434 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNV-----KPTHVFN  434 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhh-----CCCEEEE
Confidence            3457999999999999999999999998731                   124678888887776643     6999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------C-------C
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------G-------G  157 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~-------~  157 (278)
                      +|+.....  -.+...++..+.+++|+.++.++++++...      ..+++++||...+.           +       .
T Consensus       435 ~Aa~~~~~--~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~  506 (668)
T PLN02260        435 AAGVTGRP--NVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPN  506 (668)
T ss_pred             CCcccCCC--CCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceecCCcccccccCCCCCcCCCCC
Confidence            99975321  112233566789999999999999988764      23466666643211           1       1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEec
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS  192 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~  192 (278)
                      +....|+.||.+.+.+++.+...   ..+|+..+.
T Consensus       507 ~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        507 FTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             CCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence            12357999999999999876422   356666655

>PRK12320 hypothetical protein; Provisional

Probab=99.22  E-value=8e-10  Score=104.92  Aligned_cols=189  Identities=12%  Similarity=0.103  Sum_probs=119.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|.||++++++|.++|++|++++|.....    ...++.++.+|+++.. +.++++       ++|++||+|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIHLAa   69 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAG-------EADAVIHLAP   69 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhc-------CCCEEEEcCc
Confidence            599999999999999999999999999999865431    1124678999999873 444332       6899999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      .. ..        +    ..++|+.++.++++++..    .  +.++|++||..+   .+  ..|.    ..+.+..   
T Consensus        70 ~~-~~--------~----~~~vNv~Gt~nLleAA~~----~--GvRiV~~SS~~G---~~--~~~~----~aE~ll~---  118 (699)
T PRK12320         70 VD-TS--------A----PGGVGITGLAHVANAAAR----A--GARLLFVSQAAG---RP--ELYR----QAETLVS---  118 (699)
T ss_pred             cC-cc--------c----hhhHHHHHHHHHHHHHHH----c--CCeEEEEECCCC---CC--cccc----HHHHHHH---
Confidence            53 11        0    124789999988887753    2  247999988642   11  1233    2333322   


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc-CCCCCCCCCCHHHHHHHHHHhccCCCCCcee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-GSLLRGRSASIEDVAQAALFLASEEAGFITA  257 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~edva~~~~~l~s~~~~~~tG  257 (278)
                       .   .++.+..+.|..+..+......          ...+...+... ...| -+++.++|++++++.+++..   .+|
T Consensus       119 -~---~~~p~~ILR~~nVYGp~~~~~~----------~r~I~~~l~~~~~~~p-I~vIyVdDvv~alv~al~~~---~~G  180 (699)
T PRK12320        119 -T---GWAPSLVIRIAPPVGRQLDWMV----------CRTVATLLRSKVSARP-IRVLHLDDLVRFLVLALNTD---RNG  180 (699)
T ss_pred             -h---cCCCEEEEeCceecCCCCcccH----------hHHHHHHHHHHHcCCc-eEEEEHHHHHHHHHHHHhCC---CCC
Confidence             2   2467788888777665221100          00111111110 0001 12359999999999888643   235


Q ss_pred             eEEeecCCcccC
Q 023708          258 HNLVIDGGYTTG  269 (278)
Q Consensus       258 ~~i~~dgG~~~~  269 (278)
                       .+++-||..+.
T Consensus       181 -iyNIG~~~~~S  191 (699)
T PRK12320        181 -VVDLATPDTTN  191 (699)
T ss_pred             -EEEEeCCCeeE
Confidence             89998887654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.16  E-value=1.4e-10  Score=96.34  Aligned_cols=208  Identities=16%  Similarity=0.100  Sum_probs=131.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-h---CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-I---GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-~---~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ....++++++||||.|+||.+++.+|..+|+.|++++......+..... .   .+..+.-|+.     ..++.      
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~-----~pl~~------   90 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVV-----EPLLK------   90 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeech-----hHHHH------
Confidence            3456789999999999999999999999999999987643322222111 1   1223333443     33444      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------  155 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------  155 (278)
                       .+|.++|.|...++....     -...+.+.+|+.++.+++..+.+-      ..|++..|+...+-            
T Consensus        91 -evD~IyhLAapasp~~y~-----~npvktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~e~yw  158 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPPHYK-----YNPVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQVETYW  158 (350)
T ss_pred             -HhhhhhhhccCCCCcccc-----cCccceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCccccc
Confidence             589999999876443322     234578899999999988766654      46888888877652            


Q ss_pred             ----CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          156 ----GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       156 ----~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                          +......|.-.|...+.|+....++.   ||.|....+--+..|...     ....+-++.. ..+..+..+.   
T Consensus       159 g~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGPrm~-----~~dgrvvsnf-~~q~lr~epltv~  229 (350)
T KOG1429|consen  159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGPRMH-----MDDGRVVSNF-IAQALRGEPLTVY  229 (350)
T ss_pred             cccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCCccc-----cCCChhhHHH-HHHHhcCCCeEEE
Confidence                12234479999999999999888775   788777766444433211     0000000000 0111111000   


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCC
Q 023708          229 ---LLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       229 ---~~~~~~~~~edva~~~~~l~s~~  251 (278)
                         ...+.+..+.|+.+.++.|..++
T Consensus       230 g~G~qtRSF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  230 GDGKQTRSFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             cCCcceEEEEeHHHHHHHHHHHhcCC
Confidence               11356788999999999998655

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.09  E-value=1.7e-09  Score=89.93  Aligned_cols=199  Identities=19%  Similarity=0.157  Sum_probs=115.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      ++||||+|.||++++.+|.+.|+.|++..|+.........     .   .+...+.+.+..+      .++|+|||.||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----~---~v~~~~~~~~~~~------~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----P---NVTLWEGLADALT------LGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----c---cccccchhhhccc------CCCCEEEECCCC
Confidence            5899999999999999999999999999998765433221     1   1111222222221      169999999996


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh----HHHHHHHHH
Q 023708          100 SGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS----KEAIIGLAR  175 (278)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s----K~a~~~l~~  175 (278)
                      .-..+   .++.+.=+..++    +-+..++.+.....+...+.++.+=+|..++++......|.-.    .-.+..+++
T Consensus        67 ~I~~r---rWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~  139 (297)
T COG1090          67 PIAER---RWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQ  139 (297)
T ss_pred             ccccc---cCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHH
Confidence            42221   244444455544    4555566666666654434455555666666665444443322    234555666


Q ss_pred             HHHHHH---CCCCcEEEEecCCCCCChh---hHHHHHhhhccCCCCHHHHHHHHhh---cCCCCCCCCCCHHHHHHHHHH
Q 023708          176 STACEL---GKHGIRVNCISPHGVPSEM---LVNAYRKYLGKADMKPEEVCKMVRD---SGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       176 ~l~~e~---~~~~i~v~~v~pG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~edva~~~~~  246 (278)
                      .|-.+.   ...|+||..+.-|.|-++-   .....         ++  +......   .-. ..-.++..||+++++.|
T Consensus       140 ~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~---------~~--fk~glGG~~GsGr-Q~~SWIhieD~v~~I~f  207 (297)
T COG1090         140 DWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKML---------PL--FKLGLGGKLGSGR-QWFSWIHIEDLVNAILF  207 (297)
T ss_pred             HHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhc---------ch--hhhccCCccCCCC-ceeeeeeHHHHHHHHHH
Confidence            554333   3448999999988886531   11111         11  0111100   000 00136789999999999


Q ss_pred             hccCC
Q 023708          247 LASEE  251 (278)
Q Consensus       247 l~s~~  251 (278)
                      ++...
T Consensus       208 ll~~~  212 (297)
T COG1090         208 LLENE  212 (297)
T ss_pred             HHhCc
Confidence            99654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.03  E-value=1.8e-09  Score=90.36  Aligned_cols=203  Identities=16%  Similarity=0.153  Sum_probs=122.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |+||||+|.+|+.+++.|++.+++|.+..|+...  .+.+ +..++.++.+|+.|.+++.+.++       ++|.|+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~~   72 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALK-------GVDAVFSVT   72 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHT-------TCSEEEEES
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHc-------CCceEEeec
Confidence            6899999999999999999999999999998632  3333 34578899999999999998886       899999888


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC--C--CchhhhhHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL--A--SHAYSLSKEAIIGL  173 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--~--~~~Y~~sK~a~~~l  173 (278)
                      +....         .+        ......+++++...    + -.++|+ ||........  .  ...+-..|..++.+
T Consensus        73 ~~~~~---------~~--------~~~~~~li~Aa~~a----g-Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~  129 (233)
T PF05368_consen   73 PPSHP---------SE--------LEQQKNLIDAAKAA----G-VKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEY  129 (233)
T ss_dssp             SCSCC---------CH--------HHHHHHHHHHHHHH----T--SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHH
T ss_pred             Ccchh---------hh--------hhhhhhHHHhhhcc----c-cceEEE-EEecccccccccccccchhhhhhhhhhhh
Confidence            75421         11        11233455555544    2 457775 5554433211  1  12233466666655


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC-CCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS-ASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~edva~~~~~l~s~~~  252 (278)
                      .+..       +++...|.||.+.............    ............... ....+ .+++|+|+++..++..+.
T Consensus       130 l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~Dvg~~va~il~~p~  197 (233)
T PF05368_consen  130 LRES-------GIPYTIIRPGFFMENLLPPFAPVVD----IKKSKDVVTLPGPGN-QKAVPVTDTRDVGRAVAAILLDPE  197 (233)
T ss_dssp             HHHC-------TSEBEEEEE-EEHHHHHTTTHHTTC----SCCTSSEEEEETTST-SEEEEEEHHHHHHHHHHHHHHSGG
T ss_pred             hhhc-------cccceeccccchhhhhhhhhccccc----ccccceEEEEccCCC-ccccccccHHHHHHHHHHHHcChH
Confidence            5443       8999999999875443322111000    000000000000000 00123 378999999999998766


Q ss_pred             CCceeeEEeecCC
Q 023708          253 GFITAHNLVIDGG  265 (278)
Q Consensus       253 ~~~tG~~i~~dgG  265 (278)
                      .+-.|..+.+-|.
T Consensus       198 ~~~~~~~~~~~~~  210 (233)
T PF05368_consen  198 KHNNGKTIFLAGE  210 (233)
T ss_dssp             GTTEEEEEEEGGG
T ss_pred             HhcCCEEEEeCCC
Confidence            5558888888663

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.89  E-value=7.6e-09  Score=92.77  Aligned_cols=80  Identities=26%  Similarity=0.276  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH
Q 023708           13 KRLTGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        13 ~~l~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   76 (278)
                      .+++||++|||||                ||++|+++|++|+++|++|+++++..+ ..     .......+|+++.+++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~~~~~~dv~~~~~~  257 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TPAGVKRIDVESAQEM  257 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCCCcEEEccCCHHHH
Confidence            4689999999999                455999999999999999999987652 11     1112456899998887


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCC
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISG  101 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~  101 (278)
                      .+.++   +.++++|++|||||+..
T Consensus       258 ~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        258 LDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHH---HhcCCCCEEEEcccccc
Confidence            77765   45788999999999853

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.76  E-value=1.8e-07  Score=78.19  Aligned_cols=208  Identities=16%  Similarity=0.139  Sum_probs=132.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH---HHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---AALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~---~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +.+|-++-|.||+|.+|+-++.+|++.|-.|++-.|-++.-   -.+..+ -++.++..|+.|+++|+++++       .
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------~  130 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------H  130 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------h
Confidence            46788899999999999999999999999999987743221   112222 237788999999999999997       5


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      -++|||..|.--+.+.+         ..-++|+.++-.+.+.+-..-     --++|++|+..+....  .+-|=-+|++
T Consensus       131 sNVVINLIGrd~eTknf---------~f~Dvn~~~aerlAricke~G-----VerfIhvS~Lganv~s--~Sr~LrsK~~  194 (391)
T KOG2865|consen  131 SNVVINLIGRDYETKNF---------SFEDVNVHIAERLARICKEAG-----VERFIHVSCLGANVKS--PSRMLRSKAA  194 (391)
T ss_pred             CcEEEEeeccccccCCc---------ccccccchHHHHHHHHHHhhC-----hhheeehhhccccccC--hHHHHHhhhh
Confidence            79999999864333222         233567777777666554432     4589999999865333  3346677777


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChh--hHHHHHhhhccCCCCHHHHHHHHhhcCCCC-----CCCCCCHHHHHH
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEM--LVNAYRKYLGKADMKPEEVCKMVRDSGSLL-----RGRSASIEDVAQ  242 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~edva~  242 (278)
                      -+--++.   ++.    ....+.|.-+...-  +.+.+           ...++.+...+..-     .+.-+.+-|+|.
T Consensus       195 gE~aVrd---afP----eAtIirPa~iyG~eDrfln~y-----------a~~~rk~~~~pL~~~GekT~K~PVyV~DVaa  256 (391)
T KOG2865|consen  195 GEEAVRD---AFP----EATIIRPADIYGTEDRFLNYY-----------ASFWRKFGFLPLIGKGEKTVKQPVYVVDVAA  256 (391)
T ss_pred             hHHHHHh---hCC----cceeechhhhcccchhHHHHH-----------HHHHHhcCceeeecCCcceeeccEEEehHHH
Confidence            7655543   332    25567776554331  11111           11111111111000     122356789999


Q ss_pred             HHHHhccCCCCCceeeEEeecC
Q 023708          243 AALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      +++-.+.++  .-.|.++..-|
T Consensus       257 ~IvnAvkDp--~s~Gktye~vG  276 (391)
T KOG2865|consen  257 AIVNAVKDP--DSMGKTYEFVG  276 (391)
T ss_pred             HHHHhccCc--cccCceeeecC
Confidence            999999766  45577666544

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.74  E-value=1.8e-06  Score=73.62  Aligned_cols=197  Identities=17%  Similarity=0.119  Sum_probs=122.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      .+|||||+|.+|.+++++|.++|+.|.+..|+.+......  .++.+...|+.+...+...++       ++|.+++..+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~i~~   72 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAK-------GVDGVLLISG   72 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhc-------cccEEEEEec
Confidence            5899999999999999999999999999999988877776  568889999999999998876       7888888877


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      ... +..          ..............+...    .  ...+++.+|...+..  .....|..+|...+...+.. 
T Consensus        73 ~~~-~~~----------~~~~~~~~~~~~~a~~a~----~--~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~s-  132 (275)
T COG0702          73 LLD-GSD----------AFRAVQVTAVVRAAEAAG----A--GVKHGVSLSVLGADA--ASPSALARAKAAVEAALRSS-  132 (275)
T ss_pred             ccc-ccc----------chhHHHHHHHHHHHHHhc----C--CceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhc-
Confidence            543 211          011111223333333222    1  134677777777654  23447899999998887664 


Q ss_pred             HHHCCCCcEEEEec-CCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC--CCCCCHHHHHHHHHHhccCCCCCc
Q 023708          179 CELGKHGIRVNCIS-PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR--GRSASIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       179 ~e~~~~~i~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~edva~~~~~l~s~~~~~~  255 (278)
                            |+.-..+. ++++.......... .          ...... ....+.  -..+..+|++..+...+..+.  .
T Consensus       133 ------g~~~t~lr~~~~~~~~~~~~~~~-~----------~~~~~~-~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~  192 (275)
T COG0702         133 ------GIPYTTLRRAAFYLGAGAAFIEA-A----------EAAGLP-VIPRGIGRLSPIAVDDVAEALAAALDAPA--T  192 (275)
T ss_pred             ------CCCeEEEecCeeeeccchhHHHH-H----------HhhCCc-eecCCCCceeeeEHHHHHHHHHHHhcCCc--c
Confidence                  55544444 44433221110000 0          000000 000011  235678899998888876554  4


Q ss_pred             eeeEEeecC
Q 023708          256 TAHNLVIDG  264 (278)
Q Consensus       256 tG~~i~~dg  264 (278)
                      .|..+.+-|
T Consensus       193 ~~~~~~l~g  201 (275)
T COG0702         193 AGRTYELAG  201 (275)
T ss_pred             cCcEEEccC
Confidence            445555544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.68  E-value=1e-07  Score=77.09  Aligned_cols=207  Identities=14%  Similarity=0.124  Sum_probs=120.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA---HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +++||||++|=.|++|.+.+.++|.   +.++.+..                .+|+++..+.+++++..     ++..||
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------d~DLt~~a~t~~lF~~e-----kPthVI   60 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------DADLTNLADTRALFESE-----KPTHVI   60 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------cccccchHHHHHHHhcc-----CCceee
Confidence            6899999999999999999999876   34443322                38999999999999864     688999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh----------------cCCC
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI----------------MGGL  158 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~----------------~~~~  158 (278)
                      |.|+..+.  .+.+.+.  -.+.+..|+.-.-++++.+..+-.     .++|+..|...+                .+-|
T Consensus        61 hlAAmVGG--lf~N~~y--nldF~r~Nl~indNVlhsa~e~gv-----~K~vsclStCIfPdkt~yPIdEtmvh~gpphp  131 (315)
T KOG1431|consen   61 HLAAMVGG--LFHNNTY--NLDFIRKNLQINDNVLHSAHEHGV-----KKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP  131 (315)
T ss_pred             ehHhhhcc--hhhcCCC--chHHHhhcceechhHHHHHHHhch-----hhhhhhcceeecCCCCCCCCCHHHhccCCCCC
Confidence            99986422  3333321  112233333333334444444322     234444333322                1234


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh--------------hhHHHHHhhhccCCCCHHHHHHHHh
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE--------------MLVNAYRKYLGKADMKPEEVCKMVR  224 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~--------------~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                      ....|+.+|..+.-..+.++.+++.   ...++.|--+..|              +..+.......   ..    +...-
T Consensus       132 sN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~---gt----d~~~V  201 (315)
T KOG1431|consen  132 SNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRN---GT----DELTV  201 (315)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhc---CC----ceEEE
Confidence            4667999999888888888888743   4444444333222              22211110000   00    00011


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          225 DSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       225 ~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +-.-.|++.+....|+|++.+|++.+-   -.-+.|++.-|..
T Consensus       202 wGsG~PlRqFiys~DLA~l~i~vlr~Y---~~vEpiils~ge~  241 (315)
T KOG1431|consen  202 WGSGSPLRQFIYSDDLADLFIWVLREY---EGVEPIILSVGES  241 (315)
T ss_pred             ecCCChHHHHhhHhHHHHHHHHHHHhh---cCccceEeccCcc
Confidence            112247788999999999999998533   3335566665553

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.67  E-value=1.6e-06  Score=79.39  Aligned_cols=243  Identities=16%  Similarity=0.135  Sum_probs=139.6

Q ss_pred             CCCCCcEEEEeCCCC-hhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh----C-----CeEEEecCCCHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGAR-GIGAATAKLFAENGAHIVIADI-LDELGAALASTI----G-----GRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        13 ~~l~~k~vlVtGas~-giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~----~-----~~~~~~D~~~~~~i~~~~~   81 (278)
                      ....++++|||||+. .||.+++.+|+..|++||++.. ..+...+..+.+    .     .-++.++..+..+++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            356789999999975 7999999999999999998754 333333332222    1     3457799999999999999


Q ss_pred             HHHhhcC--------------CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcE--E
Q 023708           82 LAVSWKG--------------QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS--I  145 (278)
Q Consensus        82 ~~~~~~g--------------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~--i  145 (278)
                      .+-+...              .+|.++--|+.. ..+.+.+.+.. -+..+++-+.+...++-.+.++-..++-..|  +
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-VSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCC-ccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            9876321              257777777754 33355555532 2333444444444444444443322221223  3


Q ss_pred             EEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHC-CCCcEEEEecCCCCCCh-hhHHHHHhhhccCCCCHHHHHHHH
Q 023708          146 ICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGVPSE-MLVNAYRKYLGKADMKPEEVCKMV  223 (278)
Q Consensus       146 v~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~-~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                      |.-.|.- +-.+.+-..|+-+|++++.++.-|..|-. ..-+.+.--.-|++... ++..        .+    .+...+
T Consensus       550 VLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~--------Nd----iiv~ai  616 (866)
T COG4982         550 VLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGH--------ND----IIVAAI  616 (866)
T ss_pred             EecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCC--------cc----hhHHHH
Confidence            3333321 11233455899999999999988776641 11122333334665422 2111        00    011111


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHhccCCCCCc---eeeEEeecCCcccCcCccc
Q 023708          224 RDSGSLLRGRSASIEDVAQAALFLASEEAGFI---TAHNLVIDGGYTTGTSSMS  274 (278)
Q Consensus       224 ~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~---tG~~i~~dgG~~~~~~~~~  274 (278)
                      ...    -=|.-+++|+|..++-||+......   +=-..++.||.....-++.
T Consensus       617 Ek~----GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~~~~~a  666 (866)
T COG4982         617 EKA----GVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEVPLLKA  666 (866)
T ss_pred             HHh----CceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccchhhHH
Confidence            110    0134589999999999987652211   1234677799887655443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.64  E-value=1e-07  Score=85.32  Aligned_cols=81  Identities=25%  Similarity=0.313  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEeCC---------------CCh-hHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH
Q 023708           13 KRLTGKVAVITGG---------------ARG-IGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        13 ~~l~~k~vlVtGa---------------s~g-iG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   76 (278)
                      .+++||++|||||               |+| +|.++|++|.++|++|+++.+.....      .......+|+++.+++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~~~~~~~v~~~~~~  254 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPPGVKSIKVSTAEEM  254 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCCCcEEEEeccHHHH
Confidence            4589999999999               667 99999999999999999987654221      1112356899999988


Q ss_pred             -HHHHHHHHhhcCCccEEEECCccCCC
Q 023708           77 -ESAVRLAVSWKGQLDIMFNNAGISGS  102 (278)
Q Consensus        77 -~~~~~~~~~~~g~id~li~nag~~~~  102 (278)
                       ++++++.   ++++|++|+|||+...
T Consensus       255 ~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       255 LEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             HHHHHHhh---cccCCEEEEccccccc
Confidence             5555443   4679999999998643

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.63  E-value=4.4e-07  Score=73.82  Aligned_cols=79  Identities=25%  Similarity=0.402  Sum_probs=65.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++++++|+||+|++|+.+++.|++.|++|++.+|+.++.+.+.+.+    +.....+|..+.+++.+.++       +
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            678999999999999999999999999999999999988777766543    34566778888888777664       6


Q ss_pred             ccEEEECCcc
Q 023708           90 LDIMFNNAGI   99 (278)
Q Consensus        90 id~li~nag~   99 (278)
                      .|++|++...
T Consensus        98 ~diVi~at~~  107 (194)
T cd01078          98 ADVVFAAGAA  107 (194)
T ss_pred             CCEEEECCCC
Confidence            8988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.63  E-value=1.1e-07  Score=79.18  Aligned_cols=100  Identities=13%  Similarity=0.131  Sum_probs=66.7

Q ss_pred             cEEEEeCCCC-hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGGAR-GIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~-giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .+-.||+.|+ +||+++|++|+++|++|++++|......  ....++.++.++  +.+   ++.+.+.+.++++|+||||
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~--s~~---~m~~~l~~~~~~~DivIh~   88 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIE--NVD---DLLETLEPLVKDHDVLIHS   88 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEe--cHH---HHHHHHHHHhcCCCEEEeC
Confidence            4667887665 5999999999999999999887542110  011134444432  333   2333333444579999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGI  125 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~  125 (278)
                      ||+.. ..+....+.++|.+.+++|.+..
T Consensus        89 AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         89 MAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            99864 34566777889999988876554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.60  E-value=3e-07  Score=79.45  Aligned_cols=79  Identities=25%  Similarity=0.312  Sum_probs=60.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecch---HHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAH-IVIADILD---ELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~---~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++.+++.+++.     +.+..+|+++.+++.+.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999996 99999985   55666554432     3455678887777666544   


Q ss_pred             hhcCCccEEEECCccC
Q 023708           85 SWKGQLDIMFNNAGIS  100 (278)
Q Consensus        85 ~~~g~id~li~nag~~  100 (278)
                          ..|+||||..+.
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                479999998653

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.59  E-value=6.6e-07  Score=80.78  Aligned_cols=165  Identities=14%  Similarity=0.124  Sum_probs=108.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC--C-eEEEEecc------hHHHHHH-----Hhh---------hCCeEEEecC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG--A-HIVIADIL------DELGAAL-----AST---------IGGRYIHCDV   70 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g--~-~Vi~~~r~------~~~~~~~-----~~~---------~~~~~~~~D~   70 (278)
                      -+++|+++||||+|++|+-+.++|++.-  . ++.+.-|.      +++....     .+.         .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            4689999999999999999999999864  2 45555442      1122111     111         1255677888


Q ss_pred             CCHH------HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcE
Q 023708           71 TKEE------DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS  144 (278)
Q Consensus        71 ~~~~------~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~  144 (278)
                      ++++      ++..+.+       .+|++||+|+.....        +.++-...+|++|+..+++.+.....    -..
T Consensus        89 ~~~~LGis~~D~~~l~~-------eV~ivih~AAtvrFd--------e~l~~al~iNt~Gt~~~l~lak~~~~----l~~  149 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLAD-------EVNIVIHSAATVRFD--------EPLDVALGINTRGTRNVLQLAKEMVK----LKA  149 (467)
T ss_pred             cCcccCCChHHHHHHHh-------cCCEEEEeeeeeccc--------hhhhhhhhhhhHhHHHHHHHHHHhhh----hhe
Confidence            7543      2332222       799999999976443        66678899999999999986665543    347


Q ss_pred             EEEecCchhhc--------CCC--------------------------------CCchhhhhHHHHHHHHHHHHHHHCCC
Q 023708          145 IICTSSSAAIM--------GGL--------------------------------ASHAYSLSKEAIIGLARSTACELGKH  184 (278)
Q Consensus       145 iv~vsS~~~~~--------~~~--------------------------------~~~~Y~~sK~a~~~l~~~l~~e~~~~  184 (278)
                      +|++|+.-...        +++                                ....|.-+|+..+++...-+     .
T Consensus       150 ~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~  224 (467)
T KOG1221|consen  150 LVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----E  224 (467)
T ss_pred             EEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----c
Confidence            88888865530        110                                11147777777766664432     3


Q ss_pred             CcEEEEecCCCCCChhhH
Q 023708          185 GIRVNCISPHGVPSEMLV  202 (278)
Q Consensus       185 ~i~v~~v~pG~v~t~~~~  202 (278)
                      +..+..++|.++.+....
T Consensus       225 ~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  225 NLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             CCCeEEEcCCceeccccC
Confidence            678899999888766543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.59  E-value=1.4e-06  Score=77.50  Aligned_cols=170  Identities=16%  Similarity=0.168  Sum_probs=104.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS----TIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ..+-.+|+|+||+|++|+-+++.|.++|+.|.+..|+.+....+..    ......+..|.....++...+.+..  ...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~--~~~  153 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAV--PKG  153 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhc--ccc
Confidence            3456789999999999999999999999999999999887777755    2223445555555444333332221  113


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      ..+++-++|......        |..--.++...|..++++++...-     -.++|+++|+...........+..  ..
T Consensus       154 ~~~v~~~~ggrp~~e--------d~~~p~~VD~~g~knlvdA~~~aG-----vk~~vlv~si~~~~~~~~~~~~~~--~~  218 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE--------DIVTPEKVDYEGTKNLVDACKKAG-----VKRVVLVGSIGGTKFNQPPNILLL--NG  218 (411)
T ss_pred             ceeEEecccCCCCcc--------cCCCcceecHHHHHHHHHHHHHhC-----CceEEEEEeecCcccCCCchhhhh--hh
Confidence            556666666543321        111112234457777777774432     458999999988766544333331  11


Q ss_pred             HHHHH-HHHHHHHCCCCcEEEEecCCCCCChh
Q 023708          170 IIGLA-RSTACELGKHGIRVNCISPHGVPSEM  200 (278)
Q Consensus       170 ~~~l~-~~l~~e~~~~~i~v~~v~pG~v~t~~  200 (278)
                      ...-. +...+.+...|+.-..|.||....+.
T Consensus       219 ~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  219 LVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            11111 12233445678889999999876543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.50  E-value=3.6e-07  Score=88.64  Aligned_cols=159  Identities=19%  Similarity=0.224  Sum_probs=121.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHH--HH----HhhhCCeE--EEecCCCHHHHHHHHHHHHhhc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGA--AL----ASTIGGRY--IHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~--~~----~~~~~~~~--~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .|..+|+||-||.|.+++..|..+|++ +++++|+.-+.-  .+    -.+-++.+  =..|++..+....++++.. +.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-KL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-hc
Confidence            588999999999999999999999985 777887642211  11    11112332  2357777777777777644 45


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++..++|.|.+. ..+.+++.+++++++.-+..+.++.++=+........   -.-+|..||++.-++..+...|+-+.
T Consensus      1847 ~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscGRGN~GQtNYG~aN 1922 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCGRGNAGQTNYGLAN 1922 (2376)
T ss_pred             ccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeecccCCCCcccccchhh
Confidence            7899999999987 4568999999999999999999998876654443322   34788889999889999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 023708          168 EAIIGLARSTACE  180 (278)
Q Consensus       168 ~a~~~l~~~l~~e  180 (278)
                      ++++.+++.-..+
T Consensus      1923 S~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1923 SAMERICEQRRHE 1935 (2376)
T ss_pred             HHHHHHHHHhhhc
Confidence            9999999876544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.39  E-value=9.7e-06  Score=63.79  Aligned_cols=149  Identities=13%  Similarity=0.074  Sum_probs=98.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++.|.||||-.|..|+++..++|+.|.++.|+.++..+.   .++..++.|+.|.+++.+.+.       +.|+||..-|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~-------g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLA-------GHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhc-------CCceEEEecc
Confidence            578999999999999999999999999999998776544   245678999999998877665       7999998877


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--------CCC--CchhhhhHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--------GLA--SHAYSLSKE  168 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------~~~--~~~Y~~sK~  168 (278)
                      .....       .+.  ..-        .-.++++..+...+ ..|+++|+...+..-        .|.  ...|..+++
T Consensus        72 ~~~~~-------~~~--~~~--------k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~  133 (211)
T COG2910          72 AGASD-------NDE--LHS--------KSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALA  133 (211)
T ss_pred             CCCCC-------hhH--HHH--------HHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHH
Confidence            54211       011  111        11444555554433 678999887766432        122  224555555


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      ..+.| +.|..+-   .+.-.-|.|-.+..|
T Consensus       134 ~ae~L-~~Lr~~~---~l~WTfvSPaa~f~P  160 (211)
T COG2910         134 QAEFL-DSLRAEK---SLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHH-HHHhhcc---CcceEEeCcHHhcCC
Confidence            54433 3454443   366666776654433

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.32  E-value=4e-06  Score=74.40  Aligned_cols=74  Identities=24%  Similarity=0.390  Sum_probs=65.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +.+||.|+ |++|+.+|+.|+++| .+|++++|+.+.+.++.+..  ++.+.++|+.|.+.+.++++       +.|+||
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-------~~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-------DFDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-------cCCEEE
Confidence            56899999 999999999999999 89999999988888886654  57899999999999999887       359999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      |++..
T Consensus        74 n~~p~   78 (389)
T COG1748          74 NAAPP   78 (389)
T ss_pred             EeCCc
Confidence            99875

>PRK09620 hypothetical protein; Provisional

Probab=98.29  E-value=8.3e-07  Score=73.87  Aligned_cols=82  Identities=18%  Similarity=0.231  Sum_probs=51.1

Q ss_pred             CCCcEEEEeCCC----------------ChhHHHHHHHHHHcCCeEEEEecchHHHHH-HHhhhCCeEEEecCCCHHHHH
Q 023708           15 LTGKVAVITGGA----------------RGIGAATAKLFAENGAHIVIADILDELGAA-LASTIGGRYIHCDVTKEEDVE   77 (278)
Q Consensus        15 l~~k~vlVtGas----------------~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~   77 (278)
                      |+||.+|||+|.                |.+|.++|++|.++|++|+++++....... .........+..    ..++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s----~~d~~   76 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEG----IIDLQ   76 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEec----HHHHH
Confidence            578999999885                999999999999999999988753211110 111111222333    22222


Q ss_pred             HHHHHHHhhcCCccEEEECCccCC
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGISG  101 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~~  101 (278)
                      +.++++.+. .++|++||+|++..
T Consensus        77 ~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         77 DKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHhcc-cCCCEEEECccccc
Confidence            333333221 26899999999854

>PLN00106 malate dehydrogenase

Probab=98.23  E-value=1.3e-05  Score=70.00  Aligned_cols=153  Identities=15%  Similarity=0.137  Sum_probs=95.1

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHH--HHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGA--ALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+..-..++|.|||++|.+|..++..|+.++.  .+++.+.++....  ++... .......++++.+++.+.+      
T Consensus        12 ~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~-~~~~~i~~~~~~~d~~~~l------   84 (323)
T PLN00106         12 AKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHI-NTPAQVRGFLGDDQLGDAL------   84 (323)
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhC-CcCceEEEEeCCCCHHHHc------
Confidence            33444567899999999999999999997764  7999988661110  11110 0111222433333333333      


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh----h--------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA----I--------  154 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~----~--------  154 (278)
                       ...|++|+.||....  +  .   .++.+.+..|+.....+.+.+.++    ...+.++++|-..-    .        
T Consensus        85 -~~aDiVVitAG~~~~--~--g---~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~  152 (323)
T PLN00106         85 -KGADLVIIPAGVPRK--P--G---MTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKA  152 (323)
T ss_pred             -CCCCEEEEeCCCCCC--C--C---CCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHc
Confidence             379999999997422  1  1   346677888887765555554443    32344444444442    1        


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                      .++|....||.++.-...|-..++.++.
T Consensus       153 s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        153 GVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            2355667899998777788889998884

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.23  E-value=9.7e-06  Score=61.96  Aligned_cols=77  Identities=30%  Similarity=0.382  Sum_probs=59.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCC-eEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++++++|.|+ ||.|++++..|.+.|++ |.++.|+.++.+++.+.++- .+-..++.+..   +...       ..
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~---~~~~-------~~   76 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE---EALQ-------EA   76 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC---HHHH-------TE
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH---HHHh-------hC
Confidence            4789999999998 99999999999999986 99999999999998887732 23334444333   3333       69


Q ss_pred             cEEEECCccC
Q 023708           91 DIMFNNAGIS  100 (278)
Q Consensus        91 d~li~nag~~  100 (278)
                      |++|++.+..
T Consensus        77 DivI~aT~~~   86 (135)
T PF01488_consen   77 DIVINATPSG   86 (135)
T ss_dssp             SEEEE-SSTT
T ss_pred             CeEEEecCCC
Confidence            9999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.22  E-value=5.6e-06  Score=67.58  Aligned_cols=160  Identities=21%  Similarity=0.307  Sum_probs=105.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHc-CC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAEN-GA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +-....+||||+-|-+|..+|.-|-.+ |- +|++.+-.+.... +.+.  --++..|+-|...+++++-     ..+||
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~~~--GPyIy~DILD~K~L~eIVV-----n~RId  112 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VTDV--GPYIYLDILDQKSLEEIVV-----NKRID  112 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hccc--CCchhhhhhccccHHHhhc-----ccccc
Confidence            345568999999999999999988765 64 6777654433221 1111  2367789999888888763     24899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------C------C
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------L------A  159 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------~------~  159 (278)
                      -|||-.+..+.      ......--..++|+.|..++++.+..+      +=++.+-|++.+..|.      |      .
T Consensus       113 WL~HfSALLSA------vGE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  113 WLVHFSALLSA------VGETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             eeeeHHHHHHH------hcccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCCCeeeecC
Confidence            99998775422      222333456789999999988877654      2234444555554332      1      2


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEec-CCCC
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCIS-PHGV  196 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~-pG~v  196 (278)
                      ...||.||--.+-+-+.+...+   |+.+.+.. ||.+
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~i  215 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGII  215 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhc---CccceecccCccc
Confidence            3479999999999888887766   55555543 4443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.17  E-value=6.5e-06  Score=67.65  Aligned_cols=219  Identities=16%  Similarity=0.040  Sum_probs=129.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALASTI------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|++||||-+|-=|..++.-|+..|+.|+..-|..+.     .+-+...-      .......|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4699999999999999999999999999976554332     22221110      1345679999999999999876  


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-----------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-----------  154 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----------  154 (278)
                         +++-+.|.|+.....-++     +-.+-.-++...|++.++.+....-...  +=++--.|+..-+           
T Consensus       106 ---kPtEiYnLaAQSHVkvSF-----dlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQsE~  175 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSF-----DLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQSET  175 (376)
T ss_pred             ---CchhhhhhhhhcceEEEe-----ecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCCCcccC
Confidence               577788888765432222     3334455677889998888766553331  1233333333321           


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHH---HCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACE---LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e---~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                      .|+.+.++|+++|....=++-.++..   ++-.||-+|--.|-.=.+-..+.+.+....   +...+.+...-.. ....
T Consensus       176 TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvak---I~~gqqe~~~LGN-L~a~  251 (376)
T KOG1372|consen  176 TPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAK---ISLGQQEKIELGN-LSAL  251 (376)
T ss_pred             CCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHH---hhhcceeeEEecc-hhhh
Confidence            24556678999997654433333333   244567777666754343333333321100   0000000000000 0123


Q ss_pred             CCCCCHHHHHHHHHHhccCC
Q 023708          232 GRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~  251 (278)
                      +.++...|-+++++.++..+
T Consensus       252 RDWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  252 RDWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             cccchhHHHHHHHHHHHhcC
Confidence            66788889999988887544

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.15  E-value=5.9e-05  Score=65.46  Aligned_cols=79  Identities=15%  Similarity=0.263  Sum_probs=56.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+|+++++|.++++.+.+.|++|+++++++++.+.+. ..+... .+|..+.+..+++.+...  ..++|.+++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vi~  219 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADA-VFNYRAEDLADRILAATA--GQGVDVIIE  219 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCE-EEeCCCcCHHHHHHHHcC--CCceEEEEE
Confidence            5789999999999999999999999999999998877766653 344332 245555444444333221  136999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       220 ~~~  222 (325)
T cd08253         220 VLA  222 (325)
T ss_pred             CCc
Confidence            886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.06  E-value=2e-05  Score=71.06  Aligned_cols=73  Identities=27%  Similarity=0.378  Sum_probs=58.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcC-C-eEEEEecchHHHHHHHhh---hCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           20 AVITGGARGIGAATAKLFAENG-A-HIVIADILDELGAALAST---IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g-~-~Vi~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |+|.|+ |.+|+.+++.|++.+ . +|++.+|+.++++.+.+.   .++.++.+|+.|.++++++++       +.|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 999999999999987 4 899999999998888754   357889999999999999886       579999


Q ss_pred             ECCccC
Q 023708           95 NNAGIS  100 (278)
Q Consensus        95 ~nag~~  100 (278)
                      |++|..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.06  E-value=2.5e-05  Score=68.55  Aligned_cols=73  Identities=19%  Similarity=0.303  Sum_probs=55.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHc-C-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAEN-G-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~-g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++||||+|.||+.+++.|+++ | .+++++.|+++++..+..++.    ..|+.   ++++       .....|
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~----~~~i~---~l~~-------~l~~aD  217 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG----GGKIL---SLEE-------ALPEAD  217 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc----cccHH---hHHH-------HHccCC
Confidence            689999999999999999999999864 5 589999999888777765532    22332   2222       233699


Q ss_pred             EEEECCccC
Q 023708           92 IMFNNAGIS  100 (278)
Q Consensus        92 ~li~nag~~  100 (278)
                      ++||.++..
T Consensus       218 iVv~~ts~~  226 (340)
T PRK14982        218 IVVWVASMP  226 (340)
T ss_pred             EEEECCcCC
Confidence            999999864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.02  E-value=2.6e-05  Score=71.72  Aligned_cols=74  Identities=20%  Similarity=0.371  Sum_probs=56.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHH---hhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALA---STIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++|+++|+|+++ +|.++|+.|+++|++|+++++.. +...+..   ...++.++..|..+.            ..++
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------------FLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------------Hhhc
Confidence            57899999999888 99999999999999999999864 3332222   223566777777651            1247


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      +|+||+++|+.
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            99999999874

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.93  E-value=7.7e-05  Score=65.23  Aligned_cols=149  Identities=17%  Similarity=0.144  Sum_probs=89.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHH--HHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGA--ALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ..++.+++.|||+.|.+|..++..|+.++  ..+++.++......  ++... ...+...+.+|..+..+.+       .
T Consensus         4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~-~~~~~v~~~td~~~~~~~l-------~   75 (321)
T PTZ00325          4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHI-DTPAKVTGYADGELWEKAL-------R   75 (321)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhc-CcCceEEEecCCCchHHHh-------C
Confidence            34566789999999999999999999665  57999988321111  11111 1112233555544333333       3


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-------------c
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-------------M  155 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-------------~  155 (278)
                      ..|++|+.+|....  +  .   +++.+.+..|+...-.+++++.++    + ..++|+++|--..             .
T Consensus        76 gaDvVVitaG~~~~--~--~---~tR~dll~~N~~i~~~i~~~i~~~----~-~~~iviv~SNPvdv~~~~~~~~~~~~s  143 (321)
T PTZ00325         76 GADLVLICAGVPRK--P--G---MTRDDLFNTNAPIVRDLVAAVASS----A-PKAIVGIVSNPVNSTVPIAAETLKKAG  143 (321)
T ss_pred             CCCEEEECCCCCCC--C--C---CCHHHHHHHHHHHHHHHHHHHHHH----C-CCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence            79999999996422  1  1   345677888887666655555443    3 4567776664321             1


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHH
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACEL  181 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~  181 (278)
                      +.|....||.+-.=-..|-..+++.+
T Consensus       144 g~p~~~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325        144 VYDPRKLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             CCChhheeechhHHHHHHHHHHHHHh
Confidence            24555578887322233666677776

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.81  E-value=7.4e-05  Score=65.65  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=66.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC-------CeEEEEecchHH--HHHHHhhh-CCe-EEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENG-------AHIVIADILDEL--GAALASTI-GGR-YIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g-------~~Vi~~~r~~~~--~~~~~~~~-~~~-~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++||||+|.+|.+++..|+..+       ..|++.++.+..  .+....++ ... ....|+....++.       +.+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~-------~~l   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPE-------EAF   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHH-------HHh
Confidence            58999999999999999999854       589999986531  11100000 000 1111322222222       223


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~  152 (278)
                      .+.|+|||.||....+    ..+.   .+.++.|+.    +++.+.+.+.+.. .++.++++|...
T Consensus        77 ~~aDiVI~tAG~~~~~----~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          77 KDVDVAILVGAMPRKE----GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             CCCCEEEEeCCcCCCC----CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecCcH
Confidence            4799999999975221    2222   445556654    4455555555542 367777777643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.79  E-value=0.00014  Score=56.59  Aligned_cols=76  Identities=32%  Similarity=0.370  Sum_probs=55.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++++++|+|+ +++|.++++.|.+.| .+|++.+|+.+..++..+..+...+..+..+.++.          ....|+
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~Dv   84 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEEL----------LAEADL   84 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhc----------cccCCE
Confidence            356789999998 899999999999996 78999999988777776655432222344443322          237999


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      ||++....
T Consensus        85 vi~~~~~~   92 (155)
T cd01065          85 IINTTPVG   92 (155)
T ss_pred             EEeCcCCC
Confidence            99998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.78  E-value=0.00016  Score=58.08  Aligned_cols=78  Identities=28%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHH
Q 023708           15 LTGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVES   78 (278)
Q Consensus        15 l~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   78 (278)
                      |+||+||||+|                ||..|.++|+++.++|++|+++..... .. ..  ..  +-..++.+.+++.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-~p--~~--~~~i~v~sa~em~~   74 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-PP--PG--VKVIRVESAEEMLE   74 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TT--EEEEE-SSHHHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-cc--cc--ceEEEecchhhhhh
Confidence            57888888876                578999999999999999999876532 11 11  12  33455667666666


Q ss_pred             HHHHHHhhcCCccEEEECCccCC
Q 023708           79 AVRLAVSWKGQLDIMFNNAGISG  101 (278)
Q Consensus        79 ~~~~~~~~~g~id~li~nag~~~  101 (278)
                      .+.+..   ..-|++|++|++..
T Consensus        75 ~~~~~~---~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   75 AVKELL---PSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHG---GGGSEEEE-SB--S
T ss_pred             hhcccc---CcceeEEEecchhh
Confidence            665543   34599999999863

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.77  E-value=0.00067  Score=59.38  Aligned_cols=79  Identities=19%  Similarity=0.322  Sum_probs=58.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+. ..+.. ...|..+.+....+.+....  +++|++++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~~i~  241 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGAD-YVIDYRKEDFVREVRELTGK--RGVDVVVE  241 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC-eEEecCChHHHHHHHHHhCC--CCCcEEEE
Confidence            5789999999999999999999999999999998877666553 23332 22466665555555443322  36999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       242 ~~g  244 (342)
T cd08266         242 HVG  244 (342)
T ss_pred             CCc
Confidence            987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.75  E-value=0.0001  Score=63.81  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=64.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHH----cCCeEEEEecchHHHHHHHhhhC---------CeEEEecCCCHHHHHHHHHHHHh
Q 023708           19 VAVITGGARGIGAATAKLFAE----NGAHIVIADILDELGAALASTIG---------GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~----~g~~Vi~~~r~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      -++|.||||.-|.-+++++.+    .|....+++|+++++.+..+...         ...+.||.+|++++.++++    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            389999999999999999999    78889999999999988766543         2367799999999999987    


Q ss_pred             hcCCccEEEECCccC
Q 023708           86 WKGQLDIMFNNAGIS  100 (278)
Q Consensus        86 ~~g~id~li~nag~~  100 (278)
                         +..+||||+|-.
T Consensus        83 ---~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ---QARVIVNCVGPY   94 (423)
T ss_pred             ---hhEEEEeccccc
Confidence               578999999843

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.65  E-value=0.00021  Score=61.46  Aligned_cols=76  Identities=22%  Similarity=0.303  Sum_probs=54.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++|+++|+|+ ||+|++++..|++.| .+|+++.|+.++.+++.+.+.... .+++ +. +..+       .....|+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~-~~-~~~~-------~~~~~Di  188 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL-DL-ELQE-------ELADFDL  188 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee-cc-cchh-------ccccCCE
Confidence            578899999997 899999999999999 689999999888887776643111 0111 00 1111       1236899


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      |||+....
T Consensus       189 vInaTp~g  196 (278)
T PRK00258        189 IINATSAG  196 (278)
T ss_pred             EEECCcCC
Confidence            99998754

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.59  E-value=0.00042  Score=54.36  Aligned_cols=155  Identities=11%  Similarity=0.063  Sum_probs=97.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|+++.++|.||+|-.|..+.+++++.+-  +|++..|.+.--. .. ...+.-...|++..++...-+       ..+|
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-at-~k~v~q~~vDf~Kl~~~a~~~-------qg~d   85 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-AT-DKVVAQVEVDFSKLSQLATNE-------QGPD   85 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-cc-cceeeeEEechHHHHHHHhhh-------cCCc
Confidence            46788999999999999999999999883  7888888742111 11 112334556776655444433       3799


Q ss_pred             EEEECCccCCCCC---CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           92 IMFNNAGISGSGG---SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        92 ~li~nag~~~~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      +++++-|......   .+..++.+              +.++  +-.+.+.+.-..++.+||..+.....  ..|--.|.
T Consensus        86 V~FcaLgTTRgkaGadgfykvDhD--------------yvl~--~A~~AKe~Gck~fvLvSS~GAd~sSr--FlY~k~KG  147 (238)
T KOG4039|consen   86 VLFCALGTTRGKAGADGFYKVDHD--------------YVLQ--LAQAAKEKGCKTFVLVSSAGADPSSR--FLYMKMKG  147 (238)
T ss_pred             eEEEeecccccccccCceEeechH--------------HHHH--HHHHHHhCCCeEEEEEeccCCCcccc--eeeeeccc
Confidence            9999988642211   11122211              1111  11233433356899999988876553  46888888


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEML  201 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~  201 (278)
                      -++.=+..|.-+      ++..+.||++..+..
T Consensus       148 EvE~~v~eL~F~------~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  148 EVERDVIELDFK------HIIILRPGPLLGERT  174 (238)
T ss_pred             hhhhhhhhcccc------EEEEecCcceecccc
Confidence            887766554322      678889999865543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.59  E-value=0.00034  Score=65.54  Aligned_cols=48  Identities=40%  Similarity=0.505  Sum_probs=42.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+.++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            578899999999 699999999999999999999999888887776653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.58  E-value=0.00044  Score=56.46  Aligned_cols=72  Identities=26%  Similarity=0.320  Sum_probs=54.2

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+++||+++|+|.. .+|+++++.|.+.|++|++.+++.+...++.+.++...  +|.      ++++.      .++|
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~--v~~------~~l~~------~~~D   87 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV--VAP------EEIYS------VDAD   87 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE--Ecc------hhhcc------ccCC
Confidence            347899999999995 89999999999999999999998887777766544332  222      12221      1689


Q ss_pred             EEEECCc
Q 023708           92 IMFNNAG   98 (278)
Q Consensus        92 ~li~nag   98 (278)
                      +++.+|.
T Consensus        88 v~vp~A~   94 (200)
T cd01075          88 VFAPCAL   94 (200)
T ss_pred             EEEeccc
Confidence            9997774

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.57  E-value=0.00094  Score=59.83  Aligned_cols=77  Identities=27%  Similarity=0.382  Sum_probs=57.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +.++.++|.|+ |.+|+.+++.|.+.|++|++++|+.++.+.+....+. .+..+..+.+.+.+.+.       ..|++|
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~-------~aDvVI  235 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVK-------RADLLI  235 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHc-------cCCEEE
Confidence            56778999988 7999999999999999999999988777666555442 23345556555554443       689999


Q ss_pred             ECCccC
Q 023708           95 NNAGIS  100 (278)
Q Consensus        95 ~nag~~  100 (278)
                      ++++..
T Consensus       236 ~a~~~~  241 (370)
T TIGR00518       236 GAVLIP  241 (370)
T ss_pred             EccccC
Confidence            988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.55  E-value=0.0025  Score=69.44  Aligned_cols=177  Identities=14%  Similarity=0.088  Sum_probs=113.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH---HHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA---ALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~---~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+.++.++|++..++++.+++..|.++|++|+++...+....   .....  +..+...--+..++..+++.+....+++
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1829 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASA--IASVTLGTIDDTSIEAVIKDIEEKTAQI 1829 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccccccccccc--cccccccccchHHHHHHHHhhhcccccc
Confidence            345788889888999999999999999999987632211000   00111  1123444456777888888887777889


Q ss_pred             cEEEECCccCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh------
Q 023708           91 DIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY------  163 (278)
Q Consensus        91 d~li~nag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y------  163 (278)
                      +.+||..+..... ......   .....-...+...|.+.|.+.+.+...+ .+.++.++...+..++.+...-      
T Consensus      1830 ~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1830 DGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             ceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccccCCcccccccccc
Confidence            9999988754220 011111   1111112334556778887777665433 5789999988876665432221      


Q ss_pred             --hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCC
Q 023708          164 --SLSKEAIIGLARSTACELGKHGIRVNCISPHGV  196 (278)
Q Consensus       164 --~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v  196 (278)
                        ....+++.+|+|+++.|+..-.+|...+.|..-
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~~ 1940 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPKLD 1940 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCcC
Confidence              235789999999999999866677777777543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd00704 MDH Malate dehydrogenase

Probab=97.51  E-value=0.00085  Score=58.90  Aligned_cols=114  Identities=14%  Similarity=0.088  Sum_probs=70.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchHHHHHHHhhhCCeEEEecCCCHHH--HH--HHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA-------HIVIADILDELGAALASTIGGRYIHCDVTKEED--VE--SAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~--i~--~~~~~~~~~~   87 (278)
                      ++.||||+|.+|..++..|+..|.       .+++.++++.. +      .......|+.|...  ..  .+.....+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~------~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K------ALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C------ccceeeeehhhhcccccCCcEEecChHHHh
Confidence            589999999999999999998663       48899887621 0      12244556665420  00  0112223344


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-CCCcEEEEecC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSS  150 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~vsS  150 (278)
                      ...|++|+.||....  +  ..+.   .+.++.|+    .+++.+.+.+.+. +..+.++++|-
T Consensus        75 ~~aDiVVitAG~~~~--~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          75 KDVDVAILVGAFPRK--P--GMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             CCCCEEEEeCCCCCC--c--CCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            579999999997422  1  2222   34455454    4566677777665 24677777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.48  E-value=0.00073  Score=59.65  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.++||+||++++|..+++.+...|++|+.+++++++.+.+.+.++...+ .|..+.++..+.+.+...  +++|+++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~--~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFP--NGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCC--CCcEEEEE
Confidence            578999999999999999988888899999988887776666553554322 232222233333333221  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       228 ~~g  230 (338)
T cd08295         228 NVG  230 (338)
T ss_pred             CCC
Confidence            765

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.48  E-value=0.00038  Score=59.85  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ..++|-||+|.-|.-+|++|+++|.+-.+.+|+..++..+.+.++..+-..++-+++.++++++       +.++|+||+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~-------~~~VVlncv   79 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMAS-------RTQVVLNCV   79 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHh-------cceEEEecc
Confidence            4589999999999999999999999999999999999999988886666666666777777665       799999999


Q ss_pred             ccC
Q 023708           98 GIS  100 (278)
Q Consensus        98 g~~  100 (278)
                      |-.
T Consensus        80 GPy   82 (382)
T COG3268          80 GPY   82 (382)
T ss_pred             ccc
Confidence            954

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.45  E-value=0.0024  Score=59.14  Aligned_cols=113  Identities=17%  Similarity=0.206  Sum_probs=77.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCC-------------HHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK-------------EEDVESAVR   81 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-------------~~~i~~~~~   81 (278)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++.++.+... .++..++..|..+             .+..++..+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            45678999996 99999999999999999999999887665444 4677777777532             344444555


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .+.++..+.|++|+++-+.+..                    .|..+++..+..|+.   .+.||.+++..
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~--------------------aP~Lit~emv~~MKp---GsvIVDlA~d~  287 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKP--------------------APKLITEEMVDSMKA---GSVIVDLAAEQ  287 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCC--------------------CCeeehHHHHhhCCC---CCEEEEeeeCC
Confidence            5555666899999998543222                    233455666666654   45677776654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.44  E-value=0.0035  Score=58.21  Aligned_cols=112  Identities=17%  Similarity=0.204  Sum_probs=75.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCH-------------HHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE-------------EDVESAVR   81 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-------------~~i~~~~~   81 (278)
                      ..+.+|+|+|+ |.+|...+..+...|+.|++++++.++.+... .++..++..|..+.             +..++..+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            45789999986 68999999999999999999999988766554 46777666655432             11122222


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      .+.+..++.|++|.++|.....                    ++..+++..+..|++   .+.||.++..
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~--------------------aP~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKP--------------------APKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHhccCCCCEEEECCCCCccc--------------------CcchHHHHHHHhcCC---CCEEEEEccC
Confidence            2222235799999999974322                    233345777777764   5688888763

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.41  E-value=0.00078  Score=58.09  Aligned_cols=79  Identities=11%  Similarity=0.094  Sum_probs=54.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++|.++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.++.......+...+++..       .....|+
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-------~~~~~Di  193 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-------IEKAAEV  193 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-------cccCCCE
Confidence            467899999976 9999999999999997 699999999888888776432110011111122211       1236899


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      |||+....
T Consensus       194 VInaTp~g  201 (282)
T TIGR01809       194 LVSTVPAD  201 (282)
T ss_pred             EEECCCCC
Confidence            99998653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.38  E-value=0.00037  Score=64.11  Aligned_cols=74  Identities=26%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH----HHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----AALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++.+|+++|||+++ +|+++|+.|++.|++|++.++.....    +.+ ...++.+....  +...+   .+      .+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l-~~~g~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQEL-LEEGIKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHH-HhcCCEEEeCC--CCHHH---hc------Cc
Confidence            46789999999986 99999999999999999998754221    222 22244433222  12211   11      14


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      +|.||+++|+.
T Consensus        69 ~d~vV~s~gi~   79 (447)
T PRK02472         69 FDLMVKNPGIP   79 (447)
T ss_pred             CCEEEECCCCC
Confidence            89999999975

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.34  E-value=0.00063  Score=57.61  Aligned_cols=73  Identities=15%  Similarity=0.223  Sum_probs=56.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      .+||+||++- |+.++++|.++|++|+++.+++.....+.+ .+...+..+..+.+++.+++++     .++|+||..+.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-~g~~~v~~g~l~~~~l~~~l~~-----~~i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-HQALTVHTGALDPQELREFLKR-----HSIDILVDATH   74 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-cCCceEEECCCCHHHHHHHHHh-----cCCCEEEEcCC
Confidence            6999999998 999999999999999998887765444433 2333455677788887777754     37999998874

This enzyme was found to be a monomer by gel filtration.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.33  E-value=0.0054  Score=53.76  Aligned_cols=97  Identities=15%  Similarity=0.270  Sum_probs=66.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|++++|+|+. |+|...++.....|++|++.+|++++.+...+.....++  |-++++.++.+.+       .+|++|.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i--~~~~~~~~~~~~~-------~~d~ii~  235 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVI--NSSDSDALEAVKE-------IADAIID  235 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEE--EcCCchhhHHhHh-------hCcEEEE
Confidence            48999999999 999977766666999999999998877655543222333  3335665555443       2899998


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .++ .                          ..+..+++.++.   .|++|.++-..
T Consensus       236 tv~-~--------------------------~~~~~~l~~l~~---~G~~v~vG~~~  262 (339)
T COG1064         236 TVG-P--------------------------ATLEPSLKALRR---GGTLVLVGLPG  262 (339)
T ss_pred             CCC-h--------------------------hhHHHHHHHHhc---CCEEEEECCCC
Confidence            876 3                          123334555654   68999987654

>PRK06849 hypothetical protein; Provisional

Probab=97.32  E-value=0.0018  Score=58.44  Aligned_cols=81  Identities=19%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEe--cCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~--D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +.|+|||||++..+|..+++.|.+.|++|++++.............. .++.+  .-.+.+...+.+.++.+++ ++|+|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d-~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD-GFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh-heEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            35889999999999999999999999999999887544332222111 23333  2234444444444444443 58999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      |....
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            87654

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.31  E-value=0.0011  Score=56.73  Aligned_cols=73  Identities=15%  Similarity=0.190  Sum_probs=52.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCe--EEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ..+|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.....  ....+.   ++   .      .....|+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~---~------~~~~~Di  181 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DE---L------PLHRVDL  181 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hh---h------cccCccE
Confidence            45789999999 69999999999999999999999988777776654311  111111   11   0      1136899


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      ||++.+..
T Consensus       182 vInatp~g  189 (270)
T TIGR00507       182 IINATSAG  189 (270)
T ss_pred             EEECCCCC
Confidence            99999764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.30  E-value=0.002  Score=55.73  Aligned_cols=79  Identities=23%  Similarity=0.389  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+|+++++|..+++.+...|++|++++++++..+.+ +..++. ...|..+.+...++.+.. . .+++|.+++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~  214 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD-VAINYRTEDFAEEVKEAT-G-GRGVDVILD  214 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC-EEEeCCchhHHHHHHHHh-C-CCCeEEEEE
Confidence            578999999999999999999999999999999887776666 334432 223444433333333222 1 136999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       215 ~~g  217 (323)
T cd05276         215 MVG  217 (323)
T ss_pred             CCc
Confidence            987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.28  E-value=0.0066  Score=52.43  Aligned_cols=71  Identities=20%  Similarity=0.258  Sum_probs=50.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++++++++|+|. |++|+++++.|...|++|++.+|+.+......+ .+...  .   ..+++.+.+       ...|+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~--~---~~~~l~~~l-------~~aDi  212 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIP--F---PLNKLEEKV-------AEIDI  212 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCee--e---cHHHHHHHh-------ccCCE
Confidence            3688999999999 669999999999999999999998766544322 22221  1   122333333       36899


Q ss_pred             EEECC
Q 023708           93 MFNNA   97 (278)
Q Consensus        93 li~na   97 (278)
                      +|++.
T Consensus       213 Vint~  217 (287)
T TIGR02853       213 VINTI  217 (287)
T ss_pred             EEECC
Confidence            99976

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.26  E-value=0.006  Score=51.40  Aligned_cols=103  Identities=19%  Similarity=0.320  Sum_probs=67.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+|+++ +|.++++.+...|.+|+++++++++.+.+. ..+... ..|..+.+....+.   ....+++|++++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~---~~~~~~~d~vi~  207 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADH-VIDYKEEDLEEELR---LTGGGGADVVID  207 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCce-eccCCcCCHHHHHH---HhcCCCCCEEEE
Confidence            578999999998 999999998889999999998876665553 333221 23433333333332   122347999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +++..                          ...+..+..+..   .|+++.++....
T Consensus       208 ~~~~~--------------------------~~~~~~~~~l~~---~G~~v~~~~~~~  236 (271)
T cd05188         208 AVGGP--------------------------ETLAQALRLLRP---GGRIVVVGGTSG  236 (271)
T ss_pred             CCCCH--------------------------HHHHHHHHhccc---CCEEEEEccCCC
Confidence            88631                          123444455543   678998877653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.26  E-value=0.0024  Score=56.28  Aligned_cols=101  Identities=20%  Similarity=0.321  Sum_probs=66.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~li   94 (278)
                      +.++||+||+||+|...++-+.+.|++++++..++++.+ ...+++... ..|..+.+    +.+++++..+  ++|+++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~-vi~y~~~~----~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH-VINYREED----FVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE-EEcCCccc----HHHHHHHHcCCCCceEEE
Confidence            899999999999999888888888977777666666555 444444322 23344433    4444444333  599999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ...|..                           .....+..+..   .|+++.+....+
T Consensus       217 D~vG~~---------------------------~~~~~l~~l~~---~G~lv~ig~~~g  245 (326)
T COG0604         217 DTVGGD---------------------------TFAASLAALAP---GGRLVSIGALSG  245 (326)
T ss_pred             ECCCHH---------------------------HHHHHHHHhcc---CCEEEEEecCCC
Confidence            887631                           11223444443   589999988775

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.22  E-value=0.0014  Score=56.55  Aligned_cols=47  Identities=30%  Similarity=0.324  Sum_probs=41.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI   61 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~   61 (278)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+.+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l  171 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL  171 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence            467889999997 7799999999999997 7999999988888877654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.21  E-value=0.0021  Score=56.49  Aligned_cols=116  Identities=16%  Similarity=0.123  Sum_probs=72.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHH--HHH--HHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA-------HIVIADILDELGAALASTIGGRYIHCDVTKEEDVE--SAV--RLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~--~~~--~~~~~~~   87 (278)
                      .+.|+|++|.+|..++..|+..|.       .+++.++.+...       ....+..|+.|.....  ...  ....+..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            378999999999999999998664       488998864321       0124456666655111  000  0112344


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-CCCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~vsS~~  152 (278)
                      ...|++|+.||....  +  .   +++.+.++.|+.    +++.+.+.+.+. ..++.++++|-..
T Consensus        74 ~~aDiVVitAG~~~~--~--~---~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        74 TDVDVAILVGAFPRK--E--G---MERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             CCCCEEEEcCCCCCC--C--C---CcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence            579999999997422  1  1   335667676664    556666666654 2467788877533

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.20  E-value=0.0021  Score=56.30  Aligned_cols=79  Identities=22%  Similarity=0.311  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||+|+++++|..+++.+...|++|+.+++++++.+.+ .+++...+ .|..+.+...+.++....  +++|+++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~v-i~~~~~~~~~~~~~~~~~--~gvdvv~d  213 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVA-FNYKTVKSLEETLKKASP--DGYDCYFD  213 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEE-EeccccccHHHHHHHhCC--CCeEEEEE
Confidence            478999999999999999888888899999988887776655 44554322 233332234444433321  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       214 ~~G  216 (325)
T TIGR02825       214 NVG  216 (325)
T ss_pred             CCC
Confidence            776

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.19  E-value=0.0027  Score=56.02  Aligned_cols=77  Identities=22%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .++||+||++++|..+++.+...|+ +|+.+++++++.+.+.++++...+ .|..+. ++.+.+.++..  +++|+++.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~-~~~~~i~~~~~--~gvd~vid~  231 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTD-NVAERLRELCP--EGVDVYFDN  231 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCC-CHHHHHHHHCC--CCceEEEEC
Confidence            7999999999999999888778898 799998888777666554554332 233332 23333333321  369999988


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .|
T Consensus       232 ~g  233 (345)
T cd08293         232 VG  233 (345)
T ss_pred             CC
Confidence            76

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.19  E-value=0.0024  Score=56.80  Aligned_cols=80  Identities=19%  Similarity=0.298  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||+|+++++|..+++.+...|++|+.+++++++.+.+.+.++...+ .|-.+.+...+.+.+...  +++|+++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~--~gvD~v~d  234 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYKEEPDLDAALKRYFP--EGIDIYFD  234 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE-EECCCcccHHHHHHHHCC--CCcEEEEE
Confidence            478999999999999999888888899999888887776655544554322 233222233333333221  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       235 ~vG  237 (348)
T PLN03154        235 NVG  237 (348)
T ss_pred             CCC
Confidence            876

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.18  E-value=0.0027  Score=55.74  Aligned_cols=151  Identities=11%  Similarity=0.011  Sum_probs=94.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchHH--HHHHHhhhCCeEEEecCCCHHHH-H---HHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADILDEL--GAALASTIGGRYIHCDVTKEEDV-E---SAVRLAV   84 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~i-~---~~~~~~~   84 (278)
                      +++.|+|++|.+|..++..|+..|.       .+++.+..+..  +.         ....|+.+.... .   .+.....
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~---------g~a~Dl~~~~~~~~~~~~i~~~~~   73 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALE---------GVAMELEDCAFPLLAEIVITDDPN   73 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccc---------eeehhhhhccccccCceEEecCcH
Confidence            5799999999999999999998875       68898885432  22         122233222100 0   0001112


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhh--------c
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAI--------M  155 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~--------~  155 (278)
                      +.....|++|..||...  ++  ..+.   .+.++.|+    .+++.+.+.+.+.. ..+.++++|-..-.        .
T Consensus        74 ~~~~daDivvitaG~~~--k~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~s  142 (322)
T cd01338          74 VAFKDADWALLVGAKPR--GP--GMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNA  142 (322)
T ss_pred             HHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHc
Confidence            23347999999999742  22  2232   23455554    45666777776644 26778887753321        2


Q ss_pred             C-CCCCchhhhhHHHHHHHHHHHHHHHCC--CCcEE
Q 023708          156 G-GLASHAYSLSKEAIIGLARSTACELGK--HGIRV  188 (278)
Q Consensus       156 ~-~~~~~~Y~~sK~a~~~l~~~l~~e~~~--~~i~v  188 (278)
                      + .|....|+.++.--..|...+++.+.-  ..|+.
T Consensus       143 g~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         143 PDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             CCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            2 566668999999999999999999853  24553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.15  E-value=0.0032  Score=54.97  Aligned_cols=75  Identities=21%  Similarity=0.330  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|+|+++++|.++++.+...|++|+++.++.+..+.+ .......+ .|.   ++..   +.+. ..+++|++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~-~~~---~~~~---~~~~-~~~~~d~v~~  232 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYV-IDG---SKFS---EDVK-KLGGADVVIE  232 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEE-Eec---HHHH---HHHH-hccCCCEEEE
Confidence            467899999999999999999999999999988877666555 33332211 122   2122   2222 2237999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       233 ~~g~  236 (332)
T cd08259         233 LVGS  236 (332)
T ss_pred             CCCh
Confidence            9863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.10  E-value=0.0022  Score=59.40  Aligned_cols=72  Identities=25%  Similarity=0.304  Sum_probs=53.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++++++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+..+...+  +..   ++.        .....|+|
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~--~~~---~~~--------~l~~~DiV  394 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAF--PLE---SLP--------ELHRIDII  394 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccee--chh---Hhc--------ccCCCCEE
Confidence            567899999996 7999999999999999999999998877777665432221  211   111        12468999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |++...
T Consensus       395 InatP~  400 (477)
T PRK09310        395 INCLPP  400 (477)
T ss_pred             EEcCCC
Confidence            999754

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.08  E-value=0.0035  Score=56.90  Aligned_cols=74  Identities=14%  Similarity=0.197  Sum_probs=56.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++.+++++|.|+ ||+|+.++..|.+.|. +++++.|+.++...+.+.++ ...+     ..+++.+.+       ...
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~-----~~~~l~~~l-------~~a  243 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAH-----YLSELPQLI-------KKA  243 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEe-----cHHHHHHHh-------ccC
Confidence            3578999999999 9999999999999996 68899999888888877654 2211     222333333       368


Q ss_pred             cEEEECCcc
Q 023708           91 DIMFNNAGI   99 (278)
Q Consensus        91 d~li~nag~   99 (278)
                      |+||++.+.
T Consensus       244 DiVI~aT~a  252 (414)
T PRK13940        244 DIIIAAVNV  252 (414)
T ss_pred             CEEEECcCC
Confidence            999999875

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.07  E-value=0.0028  Score=58.35  Aligned_cols=71  Identities=14%  Similarity=0.206  Sum_probs=55.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHH-HHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA-VRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~g~id~li~na   97 (278)
                      .++|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+..++.++.+|.++.+.++++ +       .+.|.+|...
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~-------~~a~~vi~~~   73 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGA-------EDADLLIAVT   73 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCC-------CcCCEEEEec
Confidence            5888887 99999999999999999999999988877776545667778888877765554 2       2466666554

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.04  E-value=0.017  Score=44.31  Aligned_cols=111  Identities=23%  Similarity=0.259  Sum_probs=66.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-----C-eEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-----G-RYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++.|+|++|.+|.+++..|...+.  ++++.+++++..+....++.     . .....--.+.+           .....
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~-----------~~~~a   70 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYE-----------ALKDA   70 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGG-----------GGTTE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccccc-----------ccccc
Confidence            588999999999999999999874  69999998766554433321     1 11111102222           12368


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      |++|..+|....    ...+.   .+.++.|..    +++.+.+.+.+...++.++++|-.
T Consensus        71 Divvitag~~~~----~g~sR---~~ll~~N~~----i~~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   71 DIVVITAGVPRK----PGMSR---LDLLEANAK----IVKEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             SEEEETTSTSSS----TTSSH---HHHHHHHHH----HHHHHHHHHHHHSTTSEEEE-SSS
T ss_pred             cEEEEecccccc----ccccH---HHHHHHhHh----HHHHHHHHHHHhCCccEEEEeCCc
Confidence            999999996422    11222   344455554    455555555554446777777544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.02  E-value=0.0028  Score=58.21  Aligned_cols=80  Identities=28%  Similarity=0.294  Sum_probs=54.8

Q ss_pred             CCCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH
Q 023708           13 KRLTGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        13 ~~l~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   76 (278)
                      .+|+||.+|||+|                ||-+|+++|+++..+|++|++++-...    +..-.++.++  ++.+.+++
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~----~~~p~~v~~i--~V~ta~eM  325 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD----LADPQGVKVI--HVESARQM  325 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC----CCCCCCceEE--EecCHHHH
Confidence            4699999999987                578999999999999999998763221    1011123333  34455555


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCCC
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISGS  102 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~~  102 (278)
                      .+.++   +.+ +.|++|++|++...
T Consensus       326 ~~av~---~~~-~~Di~I~aAAVaDy  347 (475)
T PRK13982        326 LAAVE---AAL-PADIAIFAAAVADW  347 (475)
T ss_pred             HHHHH---hhC-CCCEEEEeccccce
Confidence            55544   333 36999999998643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.99  E-value=0.0053  Score=45.16  Aligned_cols=71  Identities=28%  Similarity=0.250  Sum_probs=54.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+++.+. +..++.+|.++++.++++-      ..+.+.+|....
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-~~~~i~gd~~~~~~l~~a~------i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE-GVEVIYGDATDPEVLERAG------IEKADAVVILTD   71 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-TSEEEES-TTSHHHHHHTT------GGCESEEEEESS
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-ccccccccchhhhHHhhcC------ccccCEEEEccC
Confidence            4677774 799999999999888999999999888877665 4789999999999777652      126788876653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.97  E-value=0.0061  Score=55.56  Aligned_cols=73  Identities=32%  Similarity=0.493  Sum_probs=55.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++..++.+.++...+.     .+++.+.+.       ..|+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~-----~~~l~~~l~-------~aDv  243 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVK-----FEDLEEYLA-------EADI  243 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEee-----HHHHHHHHh-------hCCE
Confidence            578899999997 999999999999999 68999999988777776665533222     223333333       5899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.+.
T Consensus       244 Vi~aT~s  250 (417)
T TIGR01035       244 VISSTGA  250 (417)
T ss_pred             EEECCCC
Confidence            9998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.95  E-value=0.0057  Score=52.71  Aligned_cols=47  Identities=28%  Similarity=0.369  Sum_probs=40.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI   61 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~   61 (278)
                      ++++|+++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            456899999998 8999999999999997 6889999988888887654

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.95  E-value=0.0065  Score=52.63  Aligned_cols=79  Identities=27%  Similarity=0.387  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+|+++++|.++++.+...|++|+++.++++..+.+ ...++..+ .+..+.+....+.+.. . .+++|.+++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~-~-~~~~d~~i~  214 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIA-INYREEDFVEVVKAET-G-GKGVDVILD  214 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEE-EecCchhHHHHHHHHc-C-CCCeEEEEE
Confidence            578999999999999999999999999999998887766544 44443222 2333333333322221 1 125999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       215 ~~~  217 (325)
T TIGR02824       215 IVG  217 (325)
T ss_pred             CCc
Confidence            876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.93  E-value=0.008  Score=52.60  Aligned_cols=144  Identities=17%  Similarity=0.135  Sum_probs=74.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHH-c--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHH----HHHHHhhcCCc
Q 023708           18 KVAVITGGARGIGAATAKLFAE-N--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA----VRLAVSWKGQL   90 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~-~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~----~~~~~~~~g~i   90 (278)
                      ++++|.||+|++|.+++..|.. .  +..+++.++++.. .         -+..|+.+......+    -+.+.+.....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~---------g~alDl~~~~~~~~i~~~~~~d~~~~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-P---------GVAVDLSHIPTAVKIKGFSGEDPTPALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-c---------ceehhhhcCCCCceEEEeCCCCHHHHcCCC
Confidence            4689999999999999998865 3  3467788876431 1         112233221100000    01111222369


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh----hc--------CCC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA----IM--------GGL  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~----~~--------~~~  158 (278)
                      |++|.++|.....    ..+   -.+.+..|....-.+    .+.|.+...++.++++|-..-    ..        ++|
T Consensus        71 DiVIitaG~~~~~----~~~---R~dll~~N~~i~~~i----i~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p  139 (312)
T PRK05086         71 DVVLISAGVARKP----GMD---RSDLFNVNAGIVKNL----VEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYD  139 (312)
T ss_pred             CEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHH----HHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCC
Confidence            9999999975321    112   234566666554444    444544332344555544441    11        233


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHC
Q 023708          159 ASHAYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                      ..-..+.+-.--..+...++..+.
T Consensus       140 ~~rvig~~~Lds~R~~~~ia~~l~  163 (312)
T PRK05086        140 KNKLFGVTTLDVIRSETFVAELKG  163 (312)
T ss_pred             HHHEEeeecHHHHHHHHHHHHHhC
Confidence            333455543333346666666653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.91  E-value=0.021  Score=50.53  Aligned_cols=75  Identities=24%  Similarity=0.352  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ .+++...+ .|..+. ++.++    .+..+.+|++|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~v-i~~~~~-~~~~~----~~~~g~~D~vi  240 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKL-VNPQND-DLDHY----KAEKGYFDVSF  240 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEE-ecCCcc-cHHHH----hccCCCCCEEE
Confidence            5789999986 8999999888888898 588888888776544 44554332 344332 23322    22235699999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .++|
T Consensus       241 d~~G  244 (343)
T PRK09880        241 EVSG  244 (343)
T ss_pred             ECCC
Confidence            9987

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.90  E-value=0.0071  Score=53.66  Aligned_cols=79  Identities=25%  Similarity=0.376  Sum_probs=52.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh-cCCccEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW-KGQLDIM   93 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~id~l   93 (278)
                      -.|+.+||.||++|+|.+.++-....|+..+++.++++.. ++.+.++.. ...|-.+++-    .+++++. .+++|+|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd-~vvdy~~~~~----~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD-EVVDYKDENV----VELIKKYTGKGVDVV  229 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc-EeecCCCHHH----HHHHHhhcCCCccEE
Confidence            3678999999999999999988888895444444444443 344444432 3356666443    3333332 4589999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      +-|.|.
T Consensus       230 lD~vg~  235 (347)
T KOG1198|consen  230 LDCVGG  235 (347)
T ss_pred             EECCCC
Confidence            999985

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.88  E-value=0.0086  Score=54.73  Aligned_cols=73  Identities=29%  Similarity=0.472  Sum_probs=54.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+.+.++..+     .+.+++.+.+       ...|+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~-----~~~~~~~~~l-------~~aDv  245 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA-----IPLDELPEAL-------AEADI  245 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE-----eeHHHHHHHh-------ccCCE
Confidence            478899999987 9999999999999997 78899999888777776654322     1223333332       25899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.|.
T Consensus       246 VI~aT~s  252 (423)
T PRK00045        246 VISSTGA  252 (423)
T ss_pred             EEECCCC
Confidence            9988764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.88  E-value=0.021  Score=50.28  Aligned_cols=77  Identities=16%  Similarity=0.233  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|+|+ +++|..+++.+...|++ |+++++++++.+.+ .+++... ..|..+.+ .+++.+ ... ..++|++|
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~-~i~~~~~~-~~~~~~-~~~-~~~~d~vi  236 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADF-VINSGQDD-VQEIRE-LTS-GAGADVAI  236 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE-EEcCCcch-HHHHHH-HhC-CCCCCEEE
Confidence            4789999986 89999999988889998 99888887776554 4455432 23444433 333322 111 12699999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       237 d~~g  240 (339)
T cd08239         237 ECSG  240 (339)
T ss_pred             ECCC
Confidence            8876

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.87  E-value=0.025  Score=49.38  Aligned_cols=112  Identities=19%  Similarity=0.205  Sum_probs=68.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhhC-C-----eEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           18 KVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTIG-G-----RYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~~-~-----~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++.|.|+ |++|..++..|+..|  .+|++++++++..+....++. .     .....-..+.+   .        ...
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~---~--------l~~   68 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS---D--------CKD   68 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH---H--------hCC
Confidence            35788896 899999999999999  479999998777665544331 0     00001111211   1        137


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .|++|+.+|....  +  ..+.   .+.++.|..    +++...+.+.+...++.++++|-..
T Consensus        69 aDIVIitag~~~~--~--g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          69 ADIVVITAGAPQK--P--GETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             CCEEEEccCCCCC--C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecChH
Confidence            9999999986422  1  2222   234444443    4555666665544467888877544

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.85  E-value=0.005  Score=51.24  Aligned_cols=74  Identities=24%  Similarity=0.333  Sum_probs=58.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH-HHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-LASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      .++|.|+ |-+|+.+|+.|.++|++|++++++++...+ ..++...+.+.+|-++++.++++=-      ...|++|...
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi------~~aD~vva~t   74 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGI------DDADAVVAAT   74 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCC------CcCCEEEEee
Confidence            4555554 678999999999999999999999999888 4446678899999999997777611      1578888766


Q ss_pred             cc
Q 023708           98 GI   99 (278)
Q Consensus        98 g~   99 (278)
                      |-
T Consensus        75 ~~   76 (225)
T COG0569          75 GN   76 (225)
T ss_pred             CC
Confidence            53

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.83  E-value=0.011  Score=47.36  Aligned_cols=73  Identities=21%  Similarity=0.258  Sum_probs=49.3

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ....+.|+++.|.|. |.||+++|+.|...|++|+..+|......... ...   +..+     +++++++       ..
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~---~~~~-----~l~ell~-------~a   92 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFG---VEYV-----SLDELLA-------QA   92 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTT---EEES-----SHHHHHH-------H-
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-ccc---ceee-----ehhhhcc-------hh
Confidence            345789999999976 89999999999999999999999876544121 111   1222     3445555       48


Q ss_pred             cEEEECCccC
Q 023708           91 DIMFNNAGIS  100 (278)
Q Consensus        91 d~li~nag~~  100 (278)
                      |+|+++....
T Consensus        93 Div~~~~plt  102 (178)
T PF02826_consen   93 DIVSLHLPLT  102 (178)
T ss_dssp             SEEEE-SSSS
T ss_pred             hhhhhhhccc
Confidence            9998887654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.83  E-value=0.0083  Score=60.12  Aligned_cols=76  Identities=16%  Similarity=0.224  Sum_probs=62.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-Ce-------------EEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG-AH-------------IVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g-~~-------------Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~   80 (278)
                      ..|.|+|.|+ |.+|+.+++.|++.. +.             |++++++.+..+++.+.. ++..+.+|++|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4678999997 999999999998753 33             778898888888877766 5678999999998888776


Q ss_pred             HHHHhhcCCccEEEECCcc
Q 023708           81 RLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~   99 (278)
                      +       ++|+||++...
T Consensus       647 ~-------~~DaVIsalP~  658 (1042)
T PLN02819        647 S-------QVDVVISLLPA  658 (1042)
T ss_pred             c-------CCCEEEECCCc
Confidence            5       59999999864

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.83  E-value=0.0098  Score=51.22  Aligned_cols=66  Identities=11%  Similarity=0.166  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .|+++-|+|+.+ ||.--++.-...|++|++.++.....++..+.++..++..-..|++.++++.+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence            689999999988 998444444456999999999887777777777766655343488888877764

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.82  E-value=0.0087  Score=51.89  Aligned_cols=79  Identities=22%  Similarity=0.373  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++++++|+|+++++|.++++.+...|++|++++++++..+.+ ...+...+ .|....+....+.+ ... ...+|.+++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~-~~~-~~~~d~vi~  219 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHV-IVTDEEDLVAEVLR-ITG-GKGVDVVFD  219 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEE-EecCCccHHHHHHH-HhC-CCCceEEEE
Confidence            578999999999999999999999999999998887766655 33343211 23222222222222 211 125999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       220 ~~~  222 (328)
T cd08268         220 PVG  222 (328)
T ss_pred             CCc
Confidence            876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.79  E-value=0.04  Score=48.88  Aligned_cols=46  Identities=24%  Similarity=0.390  Sum_probs=38.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG   63 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~   63 (278)
                      .+.+++|.|+ +++|..+++.+...|++|+++++++++.+.+ .+++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga  211 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGA  211 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC
Confidence            4789999999 9999999988888999999998888777655 44554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.77  E-value=0.013  Score=51.24  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.++... ..|..+.+..+++.+ ...  +++|+++.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~v~~-~~~--~~~d~vi~  220 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA-AINYKTPDLAEALKE-AAP--DGIDVYFD  220 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce-EEecCChhHHHHHHH-hcc--CCceEEEE
Confidence            46899999999999999999999999999999888777666554344321 123333332222222 221  46999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       221 ~~g  223 (329)
T cd05288         221 NVG  223 (329)
T ss_pred             cch
Confidence            876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.76  E-value=0.019  Score=49.14  Aligned_cols=106  Identities=17%  Similarity=0.140  Sum_probs=74.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC-CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG-QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~l   93 (278)
                      .|.+++|++|++..|.-+ -++++ .|++|+.++-.+++.+-+.+++++.. ..|-..+ +   +.+.+++... .||+.
T Consensus       150 ~GetvvVSaAaGaVGsvv-gQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~-~idyk~~-d---~~~~L~~a~P~GIDvy  223 (340)
T COG2130         150 AGETVVVSAAAGAVGSVV-GQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA-GIDYKAE-D---FAQALKEACPKGIDVY  223 (340)
T ss_pred             CCCEEEEEecccccchHH-HHHHHhhCCeEEEecCCHHHHHHHHHhcCCce-eeecCcc-c---HHHHHHHHCCCCeEEE
Confidence            489999999999999854 45555 69999999888888888887766432 2344444 2   3333333333 69999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG  157 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  157 (278)
                      +-|.|-                           .+..++++.|..   .+||+..+-++.+...
T Consensus       224 feNVGg---------------------------~v~DAv~~~ln~---~aRi~~CG~IS~YN~~  257 (340)
T COG2130         224 FENVGG---------------------------EVLDAVLPLLNL---FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEcCCc---------------------------hHHHHHHHhhcc---ccceeeeeehhhcCCC
Confidence            999883                           134556677755   5799998888876544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.76  E-value=0.0066  Score=49.84  Aligned_cols=217  Identities=15%  Similarity=0.068  Sum_probs=118.4

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+.+.+.+++-.+.++.|+.+..|.++++.....+..|.++.|++.....-.-...+.++..|.....-.+...      
T Consensus        42 nkid~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l------  115 (283)
T KOG4288|consen   42 NKIDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKL------  115 (283)
T ss_pred             CCCcchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhh------
Confidence            33344456666778999999999999999999999999999887542111111122555566554433122111      


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       -++..++.++|..+.           ...+..+|=.......++..+.    + -.++++||....-.+.--...|=.+
T Consensus       116 -~g~t~v~e~~ggfgn-----------~~~m~~ing~ani~a~kaa~~~----g-v~~fvyISa~d~~~~~~i~rGY~~g  178 (283)
T KOG4288|consen  116 -SGPTFVYEMMGGFGN-----------IILMDRINGTANINAVKAAAKA----G-VPRFVYISAHDFGLPPLIPRGYIEG  178 (283)
T ss_pred             -cCCcccHHHhcCccc-----------hHHHHHhccHhhHHHHHHHHHc----C-CceEEEEEhhhcCCCCccchhhhcc
Confidence             256677777665422           1233344444444444544432    2 5689999876653332223378899


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCC-----CCCCCCHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLL-----RGRSASIEDV  240 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~edv  240 (278)
                      |.+.|.-...      ..+.|-..++||++.......-.+.-+..-+.+.+...... .....+|     ..-.+.+|++
T Consensus       179 KR~AE~Ell~------~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~V  252 (283)
T KOG4288|consen  179 KREAEAELLK------KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESV  252 (283)
T ss_pred             chHHHHHHHH------hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHH
Confidence            9887753322      23456668899998655111100000000000111111111 0000011     2334678999


Q ss_pred             HHHHHHhccCCC
Q 023708          241 AQAALFLASEEA  252 (278)
Q Consensus       241 a~~~~~l~s~~~  252 (278)
                      |.+++..++++.
T Consensus       253 A~aal~ai~dp~  264 (283)
T KOG4288|consen  253 ALAALKAIEDPD  264 (283)
T ss_pred             HHHHHHhccCCC
Confidence            999999997663

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.75  E-value=0.0098  Score=51.97  Aligned_cols=78  Identities=21%  Similarity=0.317  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||+||++++|..+++.+...|++|+.+++++++.+.+.+ ++...+ .|..+++..++ +.+...  +++|+++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~v-i~~~~~~~~~~-v~~~~~--~gvd~vld  217 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAV-FNYKTVSLEEA-LKEAAP--DGIDCYFD  217 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEE-EeCCCccHHHH-HHHHCC--CCcEEEEE
Confidence            47899999999999999888888899999998888777666544 554322 34333332222 222211  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       218 ~~g  220 (329)
T cd08294         218 NVG  220 (329)
T ss_pred             CCC
Confidence            765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.73  E-value=0.012  Score=51.17  Aligned_cols=71  Identities=20%  Similarity=0.316  Sum_probs=50.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++.+++++|.|. |++|+.++..|.+.|++|++++|+.+...... ..+..++  +   .+++.+.+       ...|+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~--~---~~~l~~~l-------~~aDi  213 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF--H---LSELAEEV-------GKIDI  213 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee--c---HHHHHHHh-------CCCCE
Confidence            3567999999997 67999999999999999999999876644433 3343332  1   22232222       36899


Q ss_pred             EEECC
Q 023708           93 MFNNA   97 (278)
Q Consensus        93 li~na   97 (278)
                      +|++.
T Consensus       214 VI~t~  218 (296)
T PRK08306        214 IFNTI  218 (296)
T ss_pred             EEECC
Confidence            99975

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.71  E-value=0.0079  Score=53.20  Aligned_cols=37  Identities=30%  Similarity=0.488  Sum_probs=31.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      ..|++++|+|.|+ ||+|.+++..|++.|. ++.+++++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3578899999997 7899999999999998 78888765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.70  E-value=0.014  Score=50.36  Aligned_cols=47  Identities=26%  Similarity=0.327  Sum_probs=37.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch---HHHHHHHhhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILD---ELGAALASTI   61 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~---~~~~~~~~~~   61 (278)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|.++.|+.   ++.+.+.+.+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            467899999997 6669999999999996 788999984   4666666554

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.69  E-value=0.012  Score=51.39  Aligned_cols=73  Identities=27%  Similarity=0.460  Sum_probs=54.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++..++.+.++...+     +.+++.+.+.       ..|+
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~-----~~~~~~~~l~-------~aDv  241 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAV-----PLDELLELLN-------EADV  241 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEE-----eHHHHHHHHh-------cCCE
Confidence            367899999998 999999999999877 5788899998888788777654322     2233333332       5899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.+.
T Consensus       242 Vi~at~~  248 (311)
T cd05213         242 VISATGA  248 (311)
T ss_pred             EEECCCC
Confidence            9999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.62  E-value=0.0037  Score=41.87  Aligned_cols=36  Identities=25%  Similarity=0.374  Sum_probs=23.0

Q ss_pred             CCC-cEEEEeCCCChhHHHHHHHHH-HcCCeEEEEecc
Q 023708           15 LTG-KVAVITGGARGIGAATAKLFA-ENGAHIVIADIL   50 (278)
Q Consensus        15 l~~-k~vlVtGas~giG~~ia~~L~-~~g~~Vi~~~r~   50 (278)
                      +++ |++||+|+|+|.|.+....++ ..|++.+.+...
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            344 899999999999999444444 667888776543

>PLN00203 glutamyl-tRNA reductase

Probab=96.57  E-value=0.013  Score=54.65  Aligned_cols=75  Identities=16%  Similarity=0.261  Sum_probs=55.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++...+.+.++ ....   ....+++.+.+.       ..|
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~-------~aD  331 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAA-------EAD  331 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHh-------cCC
Confidence            378999999999 9999999999999997 69999999888888876642 2111   112223333332       689


Q ss_pred             EEEECCcc
Q 023708           92 IMFNNAGI   99 (278)
Q Consensus        92 ~li~nag~   99 (278)
                      +||.+.+.
T Consensus       332 VVIsAT~s  339 (519)
T PLN00203        332 VVFTSTSS  339 (519)
T ss_pred             EEEEccCC
Confidence            99988764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.0098  Score=51.19  Aligned_cols=38  Identities=26%  Similarity=0.366  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .+++||.++|.|+++-.|+.++..|.++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36899999999999999999999999999999988763

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.51  E-value=0.053  Score=48.28  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .++++||.|+ +++|...++.+...|++ |+++++++++.+.+ ++++... ..|..+.+..+++.+ .... .++|++|
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~-~i~~~~~~~~~~i~~-~~~~-~g~d~vi  250 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATH-TVNSSGTDPVEAIRA-LTGG-FGADVVI  250 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-EEcCCCcCHHHHHHH-HhCC-CCCCEEE
Confidence            4789999985 99999998888888985 88888887776655 4445422 224433332222222 1111 2589999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       251 d~~g  254 (358)
T TIGR03451       251 DAVG  254 (358)
T ss_pred             ECCC
Confidence            8887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.50  E-value=0.019  Score=50.00  Aligned_cols=79  Identities=22%  Similarity=0.328  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|+|+++++|.++++.+...|++|+.+++++++.+.+ ..++...+ .|..+.+..+.+.+. .. ..++|.+++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~-~~-~~~~d~vl~  217 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVA-VDYTRPDWPDQVREA-LG-GGGVTVVLD  217 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEE-EecCCccHHHHHHHH-cC-CCCceEEEE
Confidence            467899999999999999999999999999998887776655 44454322 233333323332221 11 125999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       218 ~~g  220 (324)
T cd08244         218 GVG  220 (324)
T ss_pred             CCC
Confidence            875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.49  E-value=0.049  Score=48.38  Aligned_cols=73  Identities=22%  Similarity=0.426  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec---chHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADI---LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+++++|+|+ |++|...++.+...|++|++++|   ++++.+ +.++++...+  |..+. ++.+ .    ...+.+|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~Ga~~v--~~~~~-~~~~-~----~~~~~~d~  241 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELGATYV--NSSKT-PVAE-V----KLVGEFDL  241 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEe--cCCcc-chhh-h----hhcCCCCE
Confidence            5789999986 99999999887788999999988   344444 4455666543  43332 2222 1    11247999


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.+.|
T Consensus       242 vid~~g  247 (355)
T cd08230         242 IIEATG  247 (355)
T ss_pred             EEECcC
Confidence            999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.49  E-value=0.0093  Score=47.22  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .++.+|.++|.|++.-.|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999999988864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.48  E-value=0.03  Score=50.08  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+ ++++... ..|..+ .+++.+.+.++..  +++|++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~-~i~~~~~~~~~~~~v~~~~~--~g~d~v  259 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD-CVNPNDYDKPIQEVIVEITD--GGVDYS  259 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe-EEcccccchhHHHHHHHHhC--CCCCEE
Confidence            4789999985 8999998888888898 799888888776655 4445432 234332 2233333333322  369999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       260 id~~G~  265 (368)
T TIGR02818       260 FECIGN  265 (368)
T ss_pred             EECCCC
Confidence            999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.47  E-value=0.07  Score=47.75  Aligned_cols=78  Identities=24%  Similarity=0.344  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+++++|+|+ +++|..++..+...|+ +|+++++++++.+.+ ++++... ..|..+.+-.++ +.+..  .+++|++|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~i~~~~~~~~~~-i~~~~--~~g~d~vi  264 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATA-TVNAGDPNAVEQ-VRELT--GGGVDYAF  264 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCce-EeCCCchhHHHH-HHHHh--CCCCCEEE
Confidence            4789999985 8999998888888899 588888887776544 4455432 234433332222 22221  13699999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .+.|.
T Consensus       265 d~~G~  269 (371)
T cd08281         265 EMAGS  269 (371)
T ss_pred             ECCCC
Confidence            98863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK04148 hypothetical protein; Provisional

Probab=96.46  E-value=0.011  Score=44.79  Aligned_cols=56  Identities=20%  Similarity=0.168  Sum_probs=46.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE   74 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~   74 (278)
                      +++.+++.|.+  .|.++|..|.+.|++|++++.++...+...+ ..+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCC
Confidence            45789999987  7888899999999999999999887665544 35778899998765

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.46  E-value=0.04  Score=48.30  Aligned_cols=116  Identities=19%  Similarity=0.198  Sum_probs=70.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-CeEE--EecCCCHHHHHHHHHHHHhhcCCc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GRYI--HCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~~~--~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++.|+|+ |.+|.+++..|+..|.  .+++.+++++.++....++. ...+  ...+.. ...        +.+...
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-~~~--------~~~~~a   74 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-GDY--------SDCKDA   74 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-CCH--------HHhCCC
Confidence            3578999998 9999999999999986  79999998776655443332 1000  111111 111        122379


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |++|..||....  +  ..+.   .+.++.|..    +++.+.+.+.+...++.++++|-..
T Consensus        75 divIitag~~~k--~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         75 DLVVITAGAPQK--P--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             CEEEEecCCCCC--C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCcH
Confidence            999999997422  1  2232   244455543    4455566665544467788877544

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.45  E-value=0.013  Score=51.21  Aligned_cols=141  Identities=16%  Similarity=0.127  Sum_probs=81.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHH-----HHHHhhcCCcc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV-----RLAVSWKGQLD   91 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~-----~~~~~~~g~id   91 (278)
                      ++.|+|++|.+|.++|..|+..+.  .+++.++++..           ....|+.+......+.     +...+.+...|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-----------g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-----------GVAADLSHIPTAASVKGFSGEEGLENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-----------EEEchhhcCCcCceEEEecCCCchHHHcCCCC
Confidence            378999999999999999998875  68888886511           2334444322100000     01123345799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh------------cCCCC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI------------MGGLA  159 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~------------~~~~~  159 (278)
                      ++|..||....  +  ..+   =.+.++.|+.    +++...+.+.+...++.++++|-..-.            .++|.
T Consensus        70 ivvitaG~~~~--~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~  138 (312)
T TIGR01772        70 VVVIPAGVPRK--P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDP  138 (312)
T ss_pred             EEEEeCCCCCC--C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCCh
Confidence            99999996422  2  222   2345556655    666667766665546788888765532            12333


Q ss_pred             CchhhhhHHHHHHHHHHHHHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACEL  181 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~  181 (278)
                      ....|.+-.=-..|-..++..+
T Consensus       139 ~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772       139 NKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             HHEEeeecchHHHHHHHHHHHh
Confidence            3344444222234555666666

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.44  E-value=0.029  Score=41.99  Aligned_cols=76  Identities=20%  Similarity=0.238  Sum_probs=55.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHH-cCCeEEE-Eecch----------------------HHHHHHHhhhCCeEEEecCCCHH
Q 023708           19 VAVITGGARGIGAATAKLFAE-NGAHIVI-ADILD----------------------ELGAALASTIGGRYIHCDVTKEE   74 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~-~g~~Vi~-~~r~~----------------------~~~~~~~~~~~~~~~~~D~~~~~   74 (278)
                      .++|.|++|.+|+.+++.+.+ .+.+++. ++|..                      ...+++.+...   +-.|++.++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D---VvIDfT~p~   78 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD---VVIDFTNPD   78 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S---EEEEES-HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC---EEEEcCChH
Confidence            589999999999999999998 6888775 45554                      23444444422   557999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCcc
Q 023708           75 DVESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        75 ~i~~~~~~~~~~~g~id~li~nag~   99 (278)
                      .+.+.++...+.  ++.+|+-..|.
T Consensus        79 ~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   79 AVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             HhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999888877  78888877764

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.42  E-value=0.031  Score=48.35  Aligned_cols=76  Identities=26%  Similarity=0.398  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+ ...++..+..+  +. +..+.+...   -+++|.++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~--~~-~~~~~i~~~---~~~~d~vl~  214 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVID--DG-AIAEQLRAA---PGGFDKVLE  214 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEec--Cc-cHHHHHHHh---CCCceEEEE
Confidence            578999999999999999999999999999988887766555 44554333222  22 222222222   236999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       215 ~~~  217 (320)
T cd08243         215 LVG  217 (320)
T ss_pred             CCC
Confidence            875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.41  E-value=0.084  Score=46.93  Aligned_cols=79  Identities=19%  Similarity=0.266  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC--HHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK--EEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++++||+| ++++|.++++.+...|+ +|+++++++++...+ +.+++..+ .|..+  ..+..+.+.+... -.++|+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~-~~~~d~  252 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADAT-IDIDELPDPQRRAIVRDITG-GRGADV  252 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeE-EcCcccccHHHHHHHHHHhC-CCCCcE
Confidence            678999997 59999999988888999 899888887766544 34454322 12221  1111112222211 125999


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      ++.+.|
T Consensus       253 vid~~g  258 (361)
T cd08231         253 VIEASG  258 (361)
T ss_pred             EEECCC
Confidence            998876

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.39  E-value=0.023  Score=52.33  Aligned_cols=76  Identities=25%  Similarity=0.266  Sum_probs=60.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+.. ++.++..|.++.+.+++.-      ..+.|.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~------~~~a~~v  301 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEG------IDEADAF  301 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcC------CccCCEE
Confidence            45688999999 99999999999999999999999988887776653 5678889999988765542      1257888


Q ss_pred             EECC
Q 023708           94 FNNA   97 (278)
Q Consensus        94 i~na   97 (278)
                      |...
T Consensus       302 i~~~  305 (453)
T PRK09496        302 IALT  305 (453)
T ss_pred             EECC
Confidence            7554

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.39  E-value=0.013  Score=50.35  Aligned_cols=75  Identities=28%  Similarity=0.379  Sum_probs=54.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEE---EecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYI---HCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~---~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +..++.++|.|| ||-+++++..|++.|+ +++++.|+.++.+++.+.++-...   ..+..+.+..+           .
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~  190 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------E  190 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------c
Confidence            446899999986 6889999999999995 799999999998888776552221   12222222111           4


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|+|||+....
T Consensus       191 ~dliINaTp~G  201 (283)
T COG0169         191 ADLLINATPVG  201 (283)
T ss_pred             cCEEEECCCCC
Confidence            89999998754

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.32  E-value=0.043  Score=49.06  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+ .+++... ..|..+. +++.+.+.++..  +++|++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~-~i~~~~~~~~~~~~v~~~~~--~g~d~v  260 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD-CVNPKDHDKPIQQVLVEMTD--GGVDYT  260 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE-EEcccccchHHHHHHHHHhC--CCCcEE
Confidence            4789999985 8999999988888999 688888888776655 4455432 2344332 234444444332  369999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +.+.|
T Consensus       261 id~~g  265 (368)
T cd08300         261 FECIG  265 (368)
T ss_pred             EECCC
Confidence            99876

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.31  E-value=0.032  Score=48.54  Aligned_cols=79  Identities=18%  Similarity=0.221  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||.|+++++|.++++.+...|++|+++.++.+..+.+.+ .++..+ .+..+.+ ..+.+.+.... .++|+++.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~-~~~~i~~~~~~-~~~d~v~d  214 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPV-VSTEQPG-WQDKVREAAGG-APISVALD  214 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEE-EcCCCch-HHHHHHHHhCC-CCCcEEEE
Confidence            47899999999999999999988999999998887776666654 344222 2323322 22222222111 25999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       215 ~~g  217 (324)
T cd08292         215 SVG  217 (324)
T ss_pred             CCC
Confidence            876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.28  E-value=0.021  Score=50.55  Aligned_cols=38  Identities=26%  Similarity=0.455  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILD   51 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~   51 (278)
                      ..|++++|+|.|+ ||+|..++..|++.|. ++.+++.+.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3578889999998 8999999999999998 788887653

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.27  E-value=0.048  Score=42.86  Aligned_cols=78  Identities=19%  Similarity=0.146  Sum_probs=54.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------------CCeEEEecCCCHHHHHHHHHH--H
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------GGRYIHCDVTKEEDVESAVRL--A   83 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~i~~~~~~--~   83 (278)
                      +++-+.|- |-+|..+|++|++.|++|++.+|+.+..+++.+..            ...++-.-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45677776 79999999999999999999999988887766431            135566678888888888876  5


Q ss_pred             HhhcCCccEEEEC
Q 023708           84 VSWKGQLDIMFNN   96 (278)
Q Consensus        84 ~~~~g~id~li~n   96 (278)
                      .....+=.++|.+
T Consensus        81 ~~~l~~g~iiid~   93 (163)
T PF03446_consen   81 LAGLRPGKIIIDM   93 (163)
T ss_dssp             GGGS-TTEEEEE-
T ss_pred             hhccccceEEEec
Confidence            5543333444443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.27  E-value=0.034  Score=48.62  Aligned_cols=78  Identities=21%  Similarity=0.364  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++.+|.++++.+...|++|+.+.++++..+.+ ..++...+ .+..+. +..+.+.....  +.+|.+++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~-~~~~~~~~~~~--~~vd~v~~  213 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRP-INYKTE-DLGEVLKKEYP--KGVDVVYE  213 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceE-EeCCCc-cHHHHHHHhcC--CCCeEEEE
Confidence            578999999999999999988888999999988887766655 33443222 232222 23333332222  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       214 ~~g  216 (329)
T cd08250         214 SVG  216 (329)
T ss_pred             CCc
Confidence            765

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.25  E-value=0.039  Score=50.61  Aligned_cols=44  Identities=25%  Similarity=0.471  Sum_probs=37.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      ++.|.||.|.+|.++++.|.+.|++|++.+|+.+...+.....+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~g   45 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELG   45 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcC
Confidence            58999999999999999999999999999998776555555444

>PLN02740 Alcohol dehydrogenase-like

Probab=96.22  E-value=0.042  Score=49.38  Aligned_cols=79  Identities=25%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||.|+ +++|..+++.+...|+ +|+++++++++.+.+ ++++... ..|..+. +...+.+.++..  +.+|++
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~i~~~~~~~~~~~~v~~~~~--~g~dvv  272 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGITD-FINPKDSDKPVHERIREMTG--GGVDYS  272 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCcE-EEecccccchHHHHHHHHhC--CCCCEE
Confidence            4789999986 9999999998888999 598888888776655 3445432 2243332 123333333322  269999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.+.|.
T Consensus       273 id~~G~  278 (381)
T PLN02740        273 FECAGN  278 (381)
T ss_pred             EECCCC
Confidence            999873

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.20  E-value=0.097  Score=46.26  Aligned_cols=77  Identities=21%  Similarity=0.266  Sum_probs=48.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc-EE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD-IM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id-~l   93 (278)
                      .+++++|+|+ +++|..+++.+...|++ |+++++++++.+.+ ++++...+ .|..+.. .+++.+....  .++| ++
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~-i~~~~~~-~~~~~~~~~~--~~~d~~v  233 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQT-FNSREMS-APQIQSVLRE--LRFDQLI  233 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceE-ecCcccC-HHHHHHHhcC--CCCCeEE
Confidence            4789999975 99999999888889997 67778877766654 44453221 2322222 2222222211  2577 77


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      |-++|
T Consensus       234 ~d~~G  238 (347)
T PRK10309        234 LETAG  238 (347)
T ss_pred             EECCC
Confidence            77776

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.19  E-value=0.039  Score=47.50  Aligned_cols=79  Identities=16%  Similarity=0.275  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+ .+.++..+. +..+.+....+.+ ... -.++|.+++
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~-~~~-~~~~d~vl~  211 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVI-NYRDEDFVERVRE-ITG-GRGVDVVYD  211 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEE-eCCchhHHHHHHH-HcC-CCCeeEEEE
Confidence            578999999999999999999889999999988887776665 334442221 2222222222221 111 125999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.+
T Consensus       212 ~~~  214 (320)
T cd05286         212 GVG  214 (320)
T ss_pred             CCC
Confidence            865

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.15  E-value=0.041  Score=48.33  Aligned_cols=145  Identities=17%  Similarity=0.234  Sum_probs=80.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhC-C-eEE--EecCCCHHHHHHHHHHHHhhcCCc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIG-G-RYI--HCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~-~-~~~--~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ..+++.|+|| |.+|..++..|+..| ..+++.+.+++.......++. . ...  ...+....+.+ .       +...
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~-------l~~A   74 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-D-------IKDS   74 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-H-------hCCC
Confidence            4568999997 889999999999988 689999987655432211111 0 000  01111111122 1       1368


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------CCCCCch
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------GGLASHA  162 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------~~~~~~~  162 (278)
                      |++|..+|.....    ..+.   .+.+..|.    -+.+.+.+.+.+-..++.++++|-.....        +.|....
T Consensus        75 DiVVitag~~~~~----g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~~~~s~~p~~rv  143 (319)
T PTZ00117         75 DVVVITAGVQRKE----EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPLDCMVKVFQEKSGIPSNKI  143 (319)
T ss_pred             CEEEECCCCCCCC----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHHHHHHHHHHhhCCCcccE
Confidence            9999999864221    2222   34455565    45667777776644356677776544321        2232233


Q ss_pred             hhhhHHHHH--HHHHHHHHHH
Q 023708          163 YSLSKEAII--GLARSTACEL  181 (278)
Q Consensus       163 Y~~sK~a~~--~l~~~l~~e~  181 (278)
                      .+.+ ..++  .+.+.++..+
T Consensus       144 iG~g-t~lds~R~~~~la~~l  163 (319)
T PTZ00117        144 CGMA-GVLDSSRFRCNLAEKL  163 (319)
T ss_pred             EEec-chHHHHHHHHHHHHHh
Confidence            4443 1222  4566666665

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.14  E-value=0.047  Score=47.63  Aligned_cols=78  Identities=21%  Similarity=0.290  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~l   93 (278)
                      .+.+++|+|+++++|.++++.+.+.|++++++.+++++.+.+. .++... ..+..+.+.   +.+++.+..  ..+|.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~---~~~~~~~~~~~~~~d~~  214 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAII-LIRYPDEEG---FAPKVKKLTGEKGVNLV  214 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcE-EEecCChhH---HHHHHHHHhCCCCceEE
Confidence            4689999999999999999999999999888888877766663 345421 123223221   222222222  258999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +++.|
T Consensus       215 i~~~~  219 (334)
T PTZ00354        215 LDCVG  219 (334)
T ss_pred             EECCc
Confidence            98865

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.13  E-value=0.032  Score=41.93  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=52.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhhC-------------CeEEEecCCCHHHHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTIG-------------GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~~-------------~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      -++-|.|+ |.+|.++++.|.+.|+.|..+ +|+.+..+...+.++             ...+-.-+.|. .+..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence            46788888 889999999999999998876 566655555544332             23333444444 689999988


Q ss_pred             Hhh--cCCccEEEECCccC
Q 023708           84 VSW--KGQLDIMFNNAGIS  100 (278)
Q Consensus        84 ~~~--~g~id~li~nag~~  100 (278)
                      ...  +.+=.+++|+.|-.
T Consensus        89 a~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HCC--S-TT-EEEES-SS-
T ss_pred             HHhccCCCCcEEEECCCCC
Confidence            865  33346899999965

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.13  E-value=0.032  Score=50.73  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=36.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA   56 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~   56 (278)
                      .+.|++++|.|. |.||+.++..|...|++|+++++++.+..+
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            468999999997 689999999999999999999988765433

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.12  E-value=0.029  Score=47.68  Aligned_cols=169  Identities=14%  Similarity=0.085  Sum_probs=95.2

Q ss_pred             CcEEEEeCCCChhHHHHHH--HHHHcCCeEEEEe--c-------------chHHHHHHHhhhC--CeEEEecCCCHHHHH
Q 023708           17 GKVAVITGGARGIGAATAK--LFAENGAHIVIAD--I-------------LDELGAALASTIG--GRYIHCDVTKEEDVE   77 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~--~L~~~g~~Vi~~~--r-------------~~~~~~~~~~~~~--~~~~~~D~~~~~~i~   77 (278)
                      .|.|||.|+|+|.|.+.-.  .+. .|+.-+.+.  |             +....++..++.+  ..-+..|..+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            3889999999999886433  333 456555431  1             1111222222222  345678998888888


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCC---------------------------------CcccCCHHHHHHHHHHHhHH
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGISGSGG---------------------------------SITSLNMEDVKFLLSVNLNG  124 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~~~~~---------------------------------~~~~~~~~~~~~~~~~N~~~  124 (278)
                      .+++.+++.+|.+|.+|+.-+......                                 .++..+.+++.....  ++|
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VMG  197 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VMG  197 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hhC
Confidence            889999999999999988765310000                                 011222333333322  222


Q ss_pred             HH---HHHHHHHHHHHccCCCcEEEEecCchhhcCCC--CCchhhhhHHHHHHHHHHHHHHHCCCCcEEE
Q 023708          125 IL---HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL--ASHAYSLSKEAIIGLARSTACELGKHGIRVN  189 (278)
Q Consensus       125 ~~---~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~  189 (278)
                      --   .++.+++..-.-.. .++-+-.|-+......|  -...-|.+|.=++.-++.+...++..+=..+
T Consensus       198 GeDWq~WidaLl~advlae-g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~  266 (398)
T COG3007         198 GEDWQMWIDALLEADVLAE-GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGAR  266 (398)
T ss_pred             cchHHHHHHHHHhcccccc-CceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCee
Confidence            21   23444444322222 33444444444433222  2335689999999999999999877654444

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.11  E-value=0.063  Score=49.42  Aligned_cols=74  Identities=20%  Similarity=0.255  Sum_probs=49.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++.+|+++|+|.+ ++|.++|+.|+++|+.|++.+.....  ...+.+. .++.++..... ..    ..       ...
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~~   68 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-DA----LD-------NGF   68 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-HH----HH-------hCC
Confidence            3678999999986 99999999999999999998765422  2222221 23444332211 11    11       268


Q ss_pred             cEEEECCccC
Q 023708           91 DIMFNNAGIS  100 (278)
Q Consensus        91 d~li~nag~~  100 (278)
                      |.||..+|+.
T Consensus        69 d~vv~spgi~   78 (445)
T PRK04308         69 DILALSPGIS   78 (445)
T ss_pred             CEEEECCCCC
Confidence            9999999985

>PRK14968 putative methyltransferase; Provisional

Probab=96.11  E-value=0.075  Score=42.42  Aligned_cols=71  Identities=21%  Similarity=0.221  Sum_probs=48.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----C---CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----G---GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~---~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|-.|+..|.   ++..|++++.+|+.++++++..+...+..     .   +.++.+|+.+.     +    .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~----~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F----RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c----cc--
Confidence            57789999976665   55566666899999999877666553322     1   45667776431     1    11  


Q ss_pred             CCccEEEECCccC
Q 023708           88 GQLDIMFNNAGIS  100 (278)
Q Consensus        88 g~id~li~nag~~  100 (278)
                      +.+|.++.|....
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            2699999998764

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.09  E-value=0.08  Score=45.15  Aligned_cols=36  Identities=22%  Similarity=0.351  Sum_probs=29.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      .|++..|+|.|+ ||+|.+++..|++.|. ++.+++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467888899875 5999999999999994 78887654

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.08  E-value=0.06  Score=48.10  Aligned_cols=78  Identities=21%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.++||.|+ +++|...++.+...|+ +|+++++++++.+.+ +.++... ..|..+. +++.+.+.++..  +++|++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~-~i~~~~~~~~~~~~v~~~~~--~~~d~v  261 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTE-FVNPKDHDKPVQEVIAEMTG--GGVDYS  261 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-EEcccccchhHHHHHHHHhC--CCCCEE
Confidence            4789999985 8999998888888898 799998888776655 4445321 1233321 234444444332  369999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +.+.|
T Consensus       262 id~~G  266 (369)
T cd08301         262 FECTG  266 (369)
T ss_pred             EECCC
Confidence            98876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.06  E-value=0.061  Score=46.87  Aligned_cols=76  Identities=16%  Similarity=0.267  Sum_probs=51.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++++|.|+++++|.++++.+...|++|+++.+++++.+.+ .+.+...+ .|..+. . .+.+....  .+.+|+++.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~-~-~~~~~~~~--~~~~d~vld~  220 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEV-IPREEL-Q-EESIKPLE--KQRWAGAVDP  220 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEE-EcchhH-H-HHHHHhhc--cCCcCEEEEC
Confidence            57999999999999999999889999999998888776666 44554222 232222 1 22222221  2358999877


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .|
T Consensus       221 ~g  222 (326)
T cd08289         221 VG  222 (326)
T ss_pred             Cc
Confidence            65

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.03  E-value=0.043  Score=47.32  Aligned_cols=79  Identities=22%  Similarity=0.364  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|+|+++++|.+++..+...|+.|+.++++.++.+.+. ..+...+ .+..+.+..+++ ..... ...+|.+++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~i-~~~~~-~~~~d~v~~  214 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHV-IDYRDPDLRERV-KALTG-GRGVDVVYD  214 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCcee-eecCCccHHHHH-HHHcC-CCCcEEEEE
Confidence            5789999999999999999999999999999988877665553 3343211 122222222222 22211 125999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       215 ~~g  217 (323)
T cd08241         215 PVG  217 (323)
T ss_pred             Ccc
Confidence            876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.03  E-value=0.054  Score=47.04  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|.++++.+...|++|+++.+++++.+.+ .+.++.. ..+..+.+...+ +.+... ..++|.++.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~-~~~~~~-~~~~d~vl~  213 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADE-VIDSSPEDLAQR-VKEATG-GAGARLALD  213 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCE-EecccchhHHHH-HHHHhc-CCCceEEEE
Confidence            568999999999999999999999999999888887665555 4444321 123333222222 222211 125999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       214 ~~g  216 (323)
T cd05282         214 AVG  216 (323)
T ss_pred             CCC
Confidence            876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.02  E-value=0.082  Score=47.71  Aligned_cols=73  Identities=26%  Similarity=0.400  Sum_probs=56.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +|+++++||.|| |-+|.-+|+.|++.| ..|+++.|+.++..++..+++     .+....+++...+.       ..|+
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~-------~~Dv  241 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALA-------EADV  241 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhh-------hCCE
Confidence            489999999998 468899999999999 578889999999999998876     33333344444443       6899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.|.
T Consensus       242 VissTsa  248 (414)
T COG0373         242 VISSTSA  248 (414)
T ss_pred             EEEecCC
Confidence            9988764

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.02  E-value=0.16  Score=43.58  Aligned_cols=76  Identities=18%  Similarity=0.242  Sum_probs=48.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+++++|.|+ +++|..+++.+...|++ |+++++++++.+. .++++...+ .|..+   ..+.+.++.. -..+|++|
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~Ga~~~-i~~~~---~~~~~~~~~~-~~g~d~vi  192 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSFGATAL-AEPEV---LAERQGGLQN-GRGVDVAL  192 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCCcEe-cCchh---hHHHHHHHhC-CCCCCEEE
Confidence            6789999987 89999998888888997 7778777766544 344453221 23222   1122222211 12589999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       193 d~~G  196 (280)
T TIGR03366       193 EFSG  196 (280)
T ss_pred             ECCC
Confidence            8876

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.96  E-value=0.04  Score=44.98  Aligned_cols=37  Identities=24%  Similarity=0.425  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      ..|+.++++|.|+ ||+|..++..|++.|. ++++.+++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3577889999998 7899999999999998 69998776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.96  E-value=0.11  Score=43.47  Aligned_cols=36  Identities=22%  Similarity=0.421  Sum_probs=29.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      .|++.+++|.|. ||+|.++++.|++.|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467788899875 6999999999999997 78887654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.95  E-value=0.066  Score=48.70  Aligned_cols=82  Identities=18%  Similarity=0.197  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA---HIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+.+++|.|+++++|...++.+...|+   +|+++++++++.+.+.+..       +......|..+.+++.+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            367899999999999988776666554   7999998888776554432       222122343332233333333221


Q ss_pred             hcCCccEEEECCc
Q 023708           86 WKGQLDIMFNNAG   98 (278)
Q Consensus        86 ~~g~id~li~nag   98 (278)
                       -.++|.+|.+.|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             125899998776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.93  E-value=0.11  Score=47.23  Aligned_cols=68  Identities=26%  Similarity=0.395  Sum_probs=49.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.|++++|.|+. .||+.++..+...|++|+++++++.+..... ..+...+     +.   ++.+       ...|++
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-----~~---~e~v-------~~aDVV  261 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-----TM---EEAV-------KEGDIF  261 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-----cH---HHHH-------cCCCEE
Confidence            4689999999986 7999999999999999999998877655443 3343222     11   1222       257999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      |.++|
T Consensus       262 I~atG  266 (413)
T cd00401         262 VTTTG  266 (413)
T ss_pred             EECCC
Confidence            98876

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.92  E-value=0.056  Score=47.26  Aligned_cols=116  Identities=22%  Similarity=0.191  Sum_probs=64.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCe--EEEEecch--HHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAH--IVIADILD--ELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~--Vi~~~r~~--~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++.|+|++|.+|..++..|+..|..  |+++++.+  +.+......+.    .......++-..+.+        ....
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~--------~l~~   72 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS--------DVAG   72 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH--------HhCC
Confidence            36899999999999999999999864  99999854  22221111110    000000111000011        1237


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .|++|.++|....    ...+.   .+.++.|+.-.    +.+.+.+.+....+.++++++..
T Consensus        73 aDiViitag~p~~----~~~~r---~dl~~~n~~i~----~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          73 SDIVIITAGVPRK----EGMSR---LDLAKKNAKIV----KKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             CCEEEEecCCCCC----CCCCH---HHHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCch
Confidence            9999999986321    12222   23444454444    44444444433367888888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.92  E-value=0.072  Score=46.86  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.+ +.++...+ .+..+.+..+++.+.. . .+++|++++
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~~-~-~~~vd~vl~  240 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAF-VDFKKSDDVEAVKELT-G-GGGAHAVVV  240 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEE-EcCCCccHHHHHHHHh-c-CCCCCEEEE
Confidence            478999999999999999999999999999999888776655 44553322 2333333233332221 1 136999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.+
T Consensus       241 ~~~  243 (341)
T cd08297         241 TAV  243 (341)
T ss_pred             cCC
Confidence            654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.91  E-value=0.078  Score=47.96  Aligned_cols=46  Identities=24%  Similarity=0.315  Sum_probs=37.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      .+.+++|+|+++++|.++++.+...|++++++.+++++.+.+.+ .+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~-~g  234 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE-LG  234 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cC
Confidence            46899999999999999998888899998888877766555543 44

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.90  E-value=0.028  Score=48.59  Aligned_cols=79  Identities=19%  Similarity=0.243  Sum_probs=56.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      -++.||.+.|.|.|+-+|+.++..|.++|++|.++.+......+..++..  ++-.-+.+...+...+       -+...
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~AD--IVIsavg~~~~v~~~~-------ik~Ga  225 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQAD--IVVAAVGRPRLIDADW-------LKPGA  225 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCC--EEEEecCChhcccHhh-------ccCCc
Confidence            37899999999999999999999999999999999776555555554433  4444455555444433       14556


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      +|...|+.
T Consensus       226 iVIDvgin  233 (301)
T PRK14194        226 VVIDVGIN  233 (301)
T ss_pred             EEEEeccc
Confidence            66666654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.90  E-value=0.048  Score=44.57  Aligned_cols=37  Identities=38%  Similarity=0.515  Sum_probs=31.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      ..|++++++|.| .||+|.++++.|++.|. ++++++.+
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            357888999998 67999999999999997 78887765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.89  E-value=0.28  Score=45.54  Aligned_cols=75  Identities=17%  Similarity=0.247  Sum_probs=52.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ..+.+|.++|.| .||.|+++++.|.+.|+.|.+.++......++.+..++.++..+- +.+    .+       ...|.
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~-~~~----~~-------~~~d~   77 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE-ASD----QL-------DSFSL   77 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCC-chh----Hh-------cCCCE
Confidence            456788899999 788999999999999999999998655443333444555443211 111    11       25899


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      ||..+|+.
T Consensus        78 vV~Spgi~   85 (473)
T PRK00141         78 VVTSPGWR   85 (473)
T ss_pred             EEeCCCCC
Confidence            99999985

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.88  E-value=0.075  Score=45.27  Aligned_cols=114  Identities=21%  Similarity=0.235  Sum_probs=66.6

Q ss_pred             EEEeCCCChhHHHHHHHHHHcC----CeEEEEecchHHHHHHHhhhC-C-eE-EEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           20 AVITGGARGIGAATAKLFAENG----AHIVIADILDELGAALASTIG-G-RY-IHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g----~~Vi~~~r~~~~~~~~~~~~~-~-~~-~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +.|.||+|.+|..++..|+..|    ..|++.+++++.++....++. . .. ....++-.++..+.+       ...|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~-------~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAF-------KDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHh-------CCCCE
Confidence            4689998899999999999999    689999987766555443332 0 00 011221111122222       37999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      +|..+|.....+    .+.   ......|    .-+.+.+.+.+.+...++.++++|-.
T Consensus        74 Vv~t~~~~~~~g----~~r---~~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~tNP  121 (263)
T cd00650          74 VIITAGVGRKPG----MGR---LDLLKRN----VPIVKEIGDNIEKYSPDAWIIVVSNP  121 (263)
T ss_pred             EEECCCCCCCcC----CCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            999998653321    111   1222222    34556666666654446777777543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.84  E-value=0.05  Score=49.95  Aligned_cols=41  Identities=24%  Similarity=0.381  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG   54 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~   54 (278)
                      ..+.||+++|.|.+ .||+.+|+.|...|++|++++++....
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            36899999999977 599999999999999999998775443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.83  E-value=0.067  Score=47.75  Aligned_cols=74  Identities=16%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|.|+ +++|..+++.+...|++|++++.+.++..+..++++...+ .|..+.+.+.+       ..+.+|++|.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~-------~~~~~D~vid  253 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF-LVSTDPEKMKA-------AIGTMDYIID  253 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE-EcCCCHHHHHh-------hcCCCCEEEE
Confidence            5789999775 8999999888888899998877766554455445554322 23333322222       2246899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       254 ~~g  256 (360)
T PLN02586        254 TVS  256 (360)
T ss_pred             CCC
Confidence            876

>PLN02827 Alcohol dehydrogenase-like

Probab=95.82  E-value=0.092  Score=47.21  Aligned_cols=79  Identities=24%  Similarity=0.262  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.++||+|+ +++|..+++.+...|++ |+++++++++.+.+ .+++...+ .|..+. ++..+.+.++..  +++|++
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~-i~~~~~~~~~~~~v~~~~~--~g~d~v  267 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDF-INPNDLSEPIQQVIKRMTG--GGADYS  267 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEE-EcccccchHHHHHHHHHhC--CCCCEE
Confidence            4789999985 89999998888888985 66777777665544 44554322 343331 234444443322  369999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.+.|.
T Consensus       268 id~~G~  273 (378)
T PLN02827        268 FECVGD  273 (378)
T ss_pred             EECCCC
Confidence            999873

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.81  E-value=0.21  Score=45.16  Aligned_cols=116  Identities=20%  Similarity=0.197  Sum_probs=65.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+++++|. |.++||..+++.+...|++++++ ++.+++.+. .++++...  .+..+.++..+.+.++... ..+|++|
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~-a~~~Ga~~--v~~~~~~~~~~~v~~~~~~-~g~Dvvi  259 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ-ARSFGCET--VDLSKDATLPEQIEQILGE-PEVDCAV  259 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH-HHHcCCeE--EecCCcccHHHHHHHHcCC-CCCcEEE
Confidence            47889995 56899999988888889986654 555555444 34456542  3433322233333332211 2599999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      .+.|......+. +.    ..       ..+-..++.++..++.   .|++++++..
T Consensus       260 d~~G~~~~~~~~-~~----~~-------~~~~~~~~~~~~~~~~---~G~i~~~G~~  301 (393)
T TIGR02819       260 DCVGFEARGHGH-DG----KK-------EAPATVLNSLMEVTRV---GGAIGIPGLY  301 (393)
T ss_pred             ECCCCccccccc-cc----cc-------cchHHHHHHHHHHhhC---CCEEEEeeec
Confidence            999853211011 11    00       0222234555665554   6899998764

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.81  E-value=0.088  Score=47.00  Aligned_cols=78  Identities=19%  Similarity=0.261  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.+++|.|+ +++|...++.+...|+ +|+.+++++++.+.+ +.++...+ .|..+. ..+.+.+.+...  +++|++
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~-i~~~~~~~~~~~~~~~~~~--~g~d~v  258 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDF-INPKDSDKPVSEVIREMTG--GGVDYS  258 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcE-eccccccchHHHHHHHHhC--CCCCEE
Confidence            4789999975 9999999888888898 688888887766655 33453211 232221 122233333322  469999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      |.+.|
T Consensus       259 id~~g  263 (365)
T cd08277         259 FECTG  263 (365)
T ss_pred             EECCC
Confidence            98876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.80  E-value=0.087  Score=47.40  Aligned_cols=102  Identities=19%  Similarity=0.182  Sum_probs=62.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +.+.+.|.||+|.+|.++.+.|.++ +.+|....+.....+.+.... ......|+.+.++++..      .+.++|+++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~-~~l~~~~~~~~~~~~~~------~~~~~DvVf  109 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVF-PHLITQDLPNLVAVKDA------DFSDVDAVF  109 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhC-ccccCccccceecCCHH------HhcCCCEEE
Confidence            4568999999999999999999988 678888777544433322211 11222343333322221      113699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      .+.+..                           ..+.+.+.+.+   ..+||-.|+..-.
T Consensus       110 ~Alp~~---------------------------~s~~i~~~~~~---g~~VIDlSs~fRl  139 (381)
T PLN02968        110 CCLPHG---------------------------TTQEIIKALPK---DLKIVDLSADFRL  139 (381)
T ss_pred             EcCCHH---------------------------HHHHHHHHHhC---CCEEEEcCchhcc
Confidence            876521                           45556666532   3577777776643

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.79  E-value=0.3  Score=39.79  Aligned_cols=66  Identities=21%  Similarity=0.193  Sum_probs=43.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhhC----------------CeEEEecCCCHHHHHHHHHH
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTIG----------------GRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~~----------------~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ....||+|-||.+++++|++.|++|++..|+.+ ..+...+.+.                +.++..-   .+.+..+.++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            456788999999999999999999999866544 3333333322                1222222   3446667777


Q ss_pred             HHhhcC
Q 023708           83 AVSWKG   88 (278)
Q Consensus        83 ~~~~~g   88 (278)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            777665

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.79  E-value=0.097  Score=46.94  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.+++|.| .+++|.+++..+...|+ +|+.+++++++.+.+ ..++.. ...+..+. +...+.+.++..  +++|.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~-~~i~~~~~~~~~~~~v~~~~~--~~~d~v  264 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGAT-ECINPQDYKKPIQEVLTEMTD--GGVDFS  264 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEecccccchhHHHHHHHHhC--CCCeEE
Confidence            468899996 58999999999989998 799998888777666 445542 11222221 123333333322  469999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +.+.|
T Consensus       265 ld~~g  269 (373)
T cd08299         265 FEVIG  269 (373)
T ss_pred             EECCC
Confidence            99876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.76  E-value=0.033  Score=47.88  Aligned_cols=37  Identities=30%  Similarity=0.439  Sum_probs=34.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      +++||.++|.|.|.-+|+-++..|.++|++|.++.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999999999999999999999999988764

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.75  E-value=0.091  Score=46.31  Aligned_cols=75  Identities=27%  Similarity=0.492  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+.+ . .++.++.+... ..|..+.+...++    .. .+++|.++.
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~~~~g~~~-~~~~~~~~~~~~l----~~-~~~vd~vi~  233 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLVKSLGADD-VIDYNNEDFEEEL----TE-RGKFDVILD  233 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHHHHhCCce-EEECCChhHHHHH----Hh-cCCCCEEEE
Confidence            489999999999999999999889999988877642 2 23434444322 2343333333322    22 246999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       234 ~~g  236 (350)
T cd08248         234 TVG  236 (350)
T ss_pred             CCC
Confidence            875

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.75  E-value=0.092  Score=39.18  Aligned_cols=90  Identities=19%  Similarity=0.329  Sum_probs=60.5

Q ss_pred             hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEEEECCccCCCCCC
Q 023708           28 GIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIMFNNAGISGSGGS  105 (278)
Q Consensus        28 giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~li~nag~~~~~~~  105 (278)
                      |||...+.-+...|++|+++++++++.+.+. +.+...+ .|-++.+    +.+++.+.++  ++|++|.++|..     
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~-~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~~-----   69 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHV-IDYSDDD----FVEQIRELTGGRGVDVVIDCVGSG-----   69 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEE-EETTTSS----HHHHHHHHTTTSSEEEEEESSSSH-----
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccc-ccccccc----cccccccccccccceEEEEecCcH-----
Confidence            6899999988899999999999988776654 4453322 4555444    4444444443  699999998831     


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708          106 ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus       106 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                            +               ..+..+..+++   .|++++++...
T Consensus        70 ------~---------------~~~~~~~~l~~---~G~~v~vg~~~   92 (130)
T PF00107_consen   70 ------D---------------TLQEAIKLLRP---GGRIVVVGVYG   92 (130)
T ss_dssp             ------H---------------HHHHHHHHEEE---EEEEEEESSTS
T ss_pred             ------H---------------HHHHHHHHhcc---CCEEEEEEccC
Confidence                  1               23334444443   68999987766

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.74  E-value=0.095  Score=47.09  Aligned_cols=74  Identities=16%  Similarity=0.261  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|.|+ +++|..+++.+...|++|+++++++++..+..++++...+ .|..+.+.+.+       ..+++|+++.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~-i~~~~~~~v~~-------~~~~~D~vid  248 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSF-LVTTDSQKMKE-------AVGTMDFIID  248 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEE-EcCcCHHHHHH-------hhCCCcEEEE
Confidence            4789999986 8999999988888999999888775554444455554322 23333322222       2246999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       249 ~~G  251 (375)
T PLN02178        249 TVS  251 (375)
T ss_pred             CCC
Confidence            876

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.70  E-value=0.053  Score=44.67  Aligned_cols=36  Identities=25%  Similarity=0.404  Sum_probs=31.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAH-IVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~   50 (278)
                      .|++++++|.|+ ||+|..++..|++.|.. +++++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            477888999995 89999999999999984 8887765

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.65  E-value=0.042  Score=42.11  Aligned_cols=39  Identities=28%  Similarity=0.411  Sum_probs=35.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .+++||.++|.|.|.-.|+.++..|.++|++|.++.+..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            378999999999999999999999999999999987643

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.60  E-value=0.047  Score=47.18  Aligned_cols=77  Identities=22%  Similarity=0.253  Sum_probs=55.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++||.++|.|-++-+|+.+|..|.++|++|.++. |+.+ .++..+..  ..+-+-+.+.+.++..+       -+...
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~~A--DIVIsavg~~~~v~~~~-------lk~Ga  224 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCRRA--DILVAAVGRPEMVKGDW-------IKPGA  224 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHhcC--CEEEEecCChhhcchhe-------ecCCC
Confidence            68999999999999999999999999999999984 6543 34444332  35555566666554433       14566


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      +|...|+.
T Consensus       225 vVIDvGin  232 (296)
T PRK14188        225 TVIDVGIN  232 (296)
T ss_pred             EEEEcCCc
Confidence            77777765

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.57  E-value=0.057  Score=38.12  Aligned_cols=60  Identities=27%  Similarity=0.352  Sum_probs=44.4

Q ss_pred             CCChhHHHHHHHHHHcC---CeEEEE-ecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           25 GARGIGAATAKLFAENG---AHIVIA-DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        25 as~giG~~ia~~L~~~g---~~Vi~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |.|.+|.++++.|.+.|   .+|.+. +|++++..++.++.++.+...|   .   .++++       .-|++|.+.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~---~---~~~~~-------~advvilav   69 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD---N---EEAAQ-------EADVVILAV   69 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE---H---HHHHH-------HTSEEEE-S
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC---h---HHhhc-------cCCEEEEEE
Confidence            88999999999999999   899955 9999999999888764443322   2   22333       378888765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.56  E-value=0.066  Score=50.81  Aligned_cols=71  Identities=15%  Similarity=0.144  Sum_probs=55.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      .++|.| .+.+|++++++|.++|.+|++.++++++.+++.+ .+...+.+|.+|++.++++-=      .+.|.++...
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i------~~a~~viv~~  489 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHL------DCARWLLLTI  489 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCc------cccCEEEEEc
Confidence            345554 5679999999999999999999999988887764 578899999999887666421      2567776543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.55  E-value=0.11  Score=48.16  Aligned_cols=74  Identities=22%  Similarity=0.218  Sum_probs=50.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHH---HhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAAL---ASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .++.++.++|.|+ |++|.++|+.|.++|++|++.++.+. ....+   .+..++.++..+-..      .       ..
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~-------~~   77 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------L-------PE   77 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------c-------cC
Confidence            3567889999997 77999999999999999999885532 22222   223345554332111      0       12


Q ss_pred             CccEEEECCccC
Q 023708           89 QLDIMFNNAGIS  100 (278)
Q Consensus        89 ~id~li~nag~~  100 (278)
                      ..|.+|..+|+.
T Consensus        78 ~~D~Vv~s~Gi~   89 (480)
T PRK01438         78 DTDLVVTSPGWR   89 (480)
T ss_pred             CCCEEEECCCcC
Confidence            589999999975

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.54  E-value=0.13  Score=46.33  Aligned_cols=46  Identities=24%  Similarity=0.346  Sum_probs=38.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      .+.+++|+|+++++|.+++..+...|++++++.+++++.+.+.+ ++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G  238 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LG  238 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cC
Confidence            47899999999999999998888899999888887777665543 55

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.52  E-value=0.09  Score=45.89  Aligned_cols=79  Identities=11%  Similarity=0.208  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+.+.+|.++++.+...|++|+.+.+.+++.+.+ +..+...+ .+..+.+ ..+.+.+... -+++|+++.
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~-~~~~~~~~~~-~~~~d~vl~  215 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQV-INYREEN-IVERVKEITG-GKKVRVVYD  215 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEE-EcCCCCc-HHHHHHHHcC-CCCeEEEEE
Confidence            578999999999999999988888999999888887776655 44454222 2322222 2222222211 125899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       216 ~~~  218 (327)
T PRK10754        216 SVG  218 (327)
T ss_pred             CCc
Confidence            765

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.51  E-value=0.11  Score=45.91  Aligned_cols=76  Identities=24%  Similarity=0.353  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~   92 (278)
                      .+++++|+|+ +++|..+++.+...|+ .|+++++++++.+.+ ...+... ..|..+.+-.+    ++.+..  +++|+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~~~~~~----~l~~~~~~~~~d~  244 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATI-VLDPTEVDVVA----EVRKLTGGGGVDV  244 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE-EECCCccCHHH----HHHHHhCCCCCCE
Confidence            4789999985 8999999999889999 788888877766544 3345332 23444433222    222222  24999


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      ++.+.|
T Consensus       245 vid~~g  250 (351)
T cd08233         245 SFDCAG  250 (351)
T ss_pred             EEECCC
Confidence            999986

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.49  E-value=0.13  Score=45.26  Aligned_cols=75  Identities=20%  Similarity=0.322  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|.| ++.+|.++++.+...|++|+.+++++++.+.+ ++++...+ .|..+.+ ..+.+.+   . +.+|.++.
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~-~~~~~~~---~-~~~d~vi~  234 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHY-IDTSKED-VAEALQE---L-GGAKLILA  234 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEE-ecCCCcc-HHHHHHh---c-CCCCEEEE
Confidence            478999999 79999999988888999999999887776655 44554322 2333222 2222222   1 36899997


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       235 ~~g  237 (333)
T cd08296         235 TAP  237 (333)
T ss_pred             CCC
Confidence            654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.48  E-value=0.073  Score=46.91  Aligned_cols=76  Identities=17%  Similarity=0.286  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+.+ +.+.+ ++.++..+ .+. +.....+ ....  .-.++|++|.
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~~~-~~~-~~~~~~~-~~~~--~~~~~d~vi~  249 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGADTV-ILR-DAPLLAD-AKAL--GGEPVDVVAD  249 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCeEE-EeC-CCccHHH-HHhh--CCCCCcEEEe
Confidence            478999999999999999999999999998887654 44333 44554422 222 2222222 1111  1135999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       250 ~~g  252 (350)
T cd08274         250 VVG  252 (350)
T ss_pred             cCC
Confidence            876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.48  E-value=0.035  Score=43.51  Aligned_cols=47  Identities=23%  Similarity=0.314  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      .+++||.++|.|.|.-+|+-++..|.++|++|.++....+..++..+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            36899999999999999999999999999999998765444444443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.47  E-value=0.11  Score=45.42  Aligned_cols=76  Identities=17%  Similarity=0.254  Sum_probs=49.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +.++||+|+++++|.++++.+... |++|+.+.+++++.+.+ .+++...+. |-.+  ...+.+.+.  ..+++|+++.
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~-~~~~--~~~~~i~~~--~~~~vd~vl~  222 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVI-DHSK--PLKAQLEKL--GLEAVSYVFS  222 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEE-ECCC--CHHHHHHHh--cCCCCCEEEE
Confidence            789999999999999987766666 99999998877766655 445543222 2111  222223322  1236999987


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.+
T Consensus       223 ~~~  225 (336)
T TIGR02817       223 LTH  225 (336)
T ss_pred             cCC
Confidence            653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.45  E-value=0.11  Score=45.48  Aligned_cols=77  Identities=21%  Similarity=0.320  Sum_probs=48.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++++++||++++|..+++.....|++|+++++++++.+.+.+ ++...+ .|..+.+-.++ +.+.... .++|+++.+.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~-i~~~~~~~~~~-v~~~~~~-~~~d~vid~~  220 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAEYV-LNSSDPDFLED-LKELIAK-LNATIFFDAV  220 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEE-EECCCccHHHH-HHHHhCC-CCCcEEEECC
Confidence            444555999999999888777889999998888776665543 454322 23333222222 2222111 2599999887


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      |
T Consensus       221 g  221 (324)
T cd08291         221 G  221 (324)
T ss_pred             C
Confidence            6

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.42  E-value=0.035  Score=42.80  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=31.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      |+++|+.+.+|++||..|.++|.+|++.  ++++-+.+..+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~   39 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSE   39 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHH
Confidence            5889999999999999999999999998  34444545443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.38  E-value=0.075  Score=47.81  Aligned_cols=36  Identities=28%  Similarity=0.421  Sum_probs=30.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      .+++++|+|.|+ ||+|.+++..|++.|. ++++++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467888898865 7999999999999998 68888765

>PRK05442 malate dehydrogenase; Provisional

Probab=95.38  E-value=0.057  Score=47.50  Aligned_cols=114  Identities=16%  Similarity=0.067  Sum_probs=67.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchHH--HHHHHhhhCCeEEEecCCCHHHHH----HHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADILDEL--GAALASTIGGRYIHCDVTKEEDVE----SAVRLAV   84 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~i~----~~~~~~~   84 (278)
                      +++.|+|++|.+|..++..|+..|.       .+++.+..+..  +.         ....|+.+.....    .+.....
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~---------g~a~Dl~~~~~~~~~~~~i~~~~y   75 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALE---------GVVMELDDCAFPLLAGVVITDDPN   75 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccc---------eeehhhhhhhhhhcCCcEEecChH
Confidence            5789999999999999999998764       58888875421  21         1223333322000    0111222


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-cCCCcEEEEecCc
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTSSS  151 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~~iv~vsS~  151 (278)
                      +.+...|++|..||...  ++  ..+   =.+.++.|+    .+++.+.+.+.+ ...++.++++|-.
T Consensus        76 ~~~~daDiVVitaG~~~--k~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         76 VAFKDADVALLVGARPR--GP--GME---RKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             HHhCCCCEEEEeCCCCC--CC--CCc---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence            33457999999999642  22  222   234455554    456667777766 3236777777753

>smart00829 PKS_ER Enoylreductase

Probab=95.35  E-value=0.11  Score=43.79  Aligned_cols=80  Identities=19%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCe-EEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|.|+++++|..++..+...|++|+.+++++++.+.+ ...+.. ....|..+.+..++ +...... .++|.++
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~~~~~~-~~~d~vi  180 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADE-ILRATGG-RGVDVVL  180 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHH-HHHHhCC-CCcEEEE
Confidence            567899999999999999988888899999998887776655 334431 01122222222222 2221111 2589888


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       181 ~~~~  184 (288)
T smart00829      181 NSLA  184 (288)
T ss_pred             eCCC
Confidence            7664

Enoylreductase in Polyketide synthases.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.34  E-value=0.072  Score=43.53  Aligned_cols=37  Identities=32%  Similarity=0.416  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .++++|.+||.|| |.+|...++.|.+.|++|+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            3789999999998 889999999999999999998765

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.34  E-value=0.39  Score=42.42  Aligned_cols=39  Identities=38%  Similarity=0.463  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE   52 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~   52 (278)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.++..+
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~  180 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPN  180 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            4789999999986 67999999999999999999988754

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.34  E-value=0.068  Score=44.48  Aligned_cols=37  Identities=35%  Similarity=0.501  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCe---EEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAH---IVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~---Vi~~~r~   50 (278)
                      .++++++++|.|| |+.|++++..|.+.|.+   +++++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3678899999999 99999999999999975   8899987

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.1  Score=44.80  Aligned_cols=79  Identities=20%  Similarity=0.193  Sum_probs=52.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      -++.||.++|.|.|.-+|+-++..|.++|++|.++.+....+.+..+...+  +-.=+..+.-+..  +     +=+...
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADI--VV~avG~~~~i~~--~-----~ik~ga  224 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADI--VVAAVGKRNVLTA--D-----MVKPGA  224 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCE--EEEcCCCcCccCH--H-----HcCCCC
Confidence            368999999999999999999999999999999876654445554444332  2222222221111  1     124567


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      +|.+.|+.
T Consensus       225 vVIDVGin  232 (285)
T PRK14189        225 TVIDVGMN  232 (285)
T ss_pred             EEEEcccc
Confidence            77778865

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.32  E-value=0.096  Score=45.74  Aligned_cols=142  Identities=18%  Similarity=0.167  Sum_probs=79.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHH---HHHHH-H-HHHHhhcCCcc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEE---DVESA-V-RLAVSWKGQLD   91 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~i~~~-~-~~~~~~~g~id   91 (278)
                      ++.|+|++|.+|.++|..|+.+|.  .+++.+.+  ..+         ....|+.+..   .+... - +++.+.+...|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~---------g~alDL~~~~~~~~i~~~~~~~~~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTP---------GVAADLSHINTPAKVTGYLGPEELKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccc---------eeehHhHhCCCcceEEEecCCCchHHhcCCCC
Confidence            578999999999999999998884  68888876  111         1223333221   01000 0 11123345799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch-------hh-----cCCCC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA-------AI-----MGGLA  159 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~-------~~-----~~~~~  159 (278)
                      ++|..||....  +  ..+.   .+.++.|..-.    +...+.+.+...++.++++|-..       .+     .++|.
T Consensus        71 ivvitaG~~~k--~--g~tR---~dll~~N~~i~----~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~  139 (310)
T cd01337          71 VVVIPAGVPRK--P--GMTR---DDLFNINAGIV----RDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDP  139 (310)
T ss_pred             EEEEeCCCCCC--C--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCH
Confidence            99999997422  2  2222   34555565444    44445444434367888887765       21     12333


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHC
Q 023708          160 SHAYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                      ....|.+-.=-..+-..+++++.
T Consensus       140 ~rviG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         140 KRLFGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             HHEEeeechHHHHHHHHHHHHhC
Confidence            33455543222346666777763

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.32  E-value=0.12  Score=45.01  Aligned_cols=76  Identities=16%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +.+++|.|+++++|.++++.+...|++|+++.+++++.+.+ ...+...+ .|..+.+  .+..+....  +.+|+++++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~--~~~~~~~~~--~~~d~vi~~  220 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEV-LDREDLL--DESKKPLLK--ARWAGAIDT  220 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEE-EcchhHH--HHHHHHhcC--CCccEEEEC
Confidence            46899999999999999988888999999998887776655 34454322 2322211  122222211  258999877


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .|
T Consensus       221 ~~  222 (325)
T cd05280         221 VG  222 (325)
T ss_pred             Cc
Confidence            64

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.27  E-value=0.058  Score=44.61  Aligned_cols=41  Identities=24%  Similarity=0.263  Sum_probs=36.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      ++.|.||+|.+|.+++..|++.|++|++.+|+++..+.+.+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            48899999999999999999999999999998877766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.27  E-value=0.14  Score=44.94  Aligned_cols=70  Identities=24%  Similarity=0.353  Sum_probs=49.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+++||++.|.| .|.||+++|+.+..-|++|+..+|...  .+..+..+..+  +|      ++++++       +-|
T Consensus       141 ~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y--~~------l~ell~-------~sD  202 (324)
T COG1052         141 GFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARY--VD------LDELLA-------ESD  202 (324)
T ss_pred             ccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCcee--cc------HHHHHH-------hCC
Confidence            4589999999998 578999999999988999999998764  22222222222  22      455555       589


Q ss_pred             EEEECCcc
Q 023708           92 IMFNNAGI   99 (278)
Q Consensus        92 ~li~nag~   99 (278)
                      +|+.++..
T Consensus       203 ii~l~~Pl  210 (324)
T COG1052         203 IISLHCPL  210 (324)
T ss_pred             EEEEeCCC
Confidence            88766654

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.23  E-value=0.1  Score=45.63  Aligned_cols=73  Identities=16%  Similarity=0.285  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++.+|.++++.+...|++|+.++++.++.+.+. .+...++     +..+   ..+.+.+ .+++|+++.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~~-----~~~~---~~~~v~~-~~~~d~~ld  231 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KYADYVI-----VGSK---FSEEVKK-IGGADIVIE  231 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHhc-----Cchh---HHHHHHh-cCCCcEEEE
Confidence            4789999999999999999999999999998888777665553 2210111     1111   2222222 246899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       232 ~~g  234 (334)
T PRK13771        232 TVG  234 (334)
T ss_pred             cCC
Confidence            865

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=95.20  E-value=0.37  Score=43.38  Aligned_cols=80  Identities=20%  Similarity=0.267  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|.| .+.+|..++..+...|. .|+.+++++++.+.+.+.....+  .+..+.++..+.+..... ...+|+++
T Consensus       184 ~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v--i~~~~~~~~~~~l~~~~~-~~~~D~vl  259 (386)
T cd08283         184 PGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET--INFEEVDDVVEALRELTG-GRGPDVCI  259 (386)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--EcCCcchHHHHHHHHHcC-CCCCCEEE
Confidence            467899996 58999999888888998 48888888777665554323332  233332222222222211 12599999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .+.|.
T Consensus       260 d~vg~  264 (386)
T cd08283         260 DAVGM  264 (386)
T ss_pred             ECCCC
Confidence            98763

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.18  E-value=0.083  Score=45.34  Aligned_cols=38  Identities=32%  Similarity=0.494  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      -++.||.++|.|.|.-+|+-++..|.++|++|.++...
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            36899999999999999999999999999999987543

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.16  E-value=0.13  Score=35.70  Aligned_cols=36  Identities=39%  Similarity=0.678  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEec
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADI   49 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r   49 (278)
                      .++.+++++|.|+ ++.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578899999999 99999999999998 567777776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PLN02494 adenosylhomocysteinase

Probab=95.15  E-value=0.12  Score=47.35  Aligned_cols=39  Identities=31%  Similarity=0.477  Sum_probs=34.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL   53 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~   53 (278)
                      .+.||+++|.|.. .||+.+|+.+...|++|+++++++.+
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3689999999986 89999999999999999999887654

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.13  E-value=0.077  Score=42.76  Aligned_cols=37  Identities=35%  Similarity=0.487  Sum_probs=34.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      +++||.++|.|-|.-+|+-++..|.++|++|.+++.+
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~   95 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN   95 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence            7999999999999999999999999999999998644

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=95.08  E-value=0.24  Score=43.59  Aligned_cols=78  Identities=23%  Similarity=0.375  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+++++|+| .+++|..+++.+...|.+|+++.++.++.+.+ ...++.. ..|..++.+..+.+.....  +++|.++.
T Consensus       165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~-~i~~~~~~~~~~~~~~~~~--~~~d~vi~  239 (345)
T cd08260         165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVA-TVNASEVEDVAAAVRDLTG--GGAHVSVD  239 (345)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCE-EEccccchhHHHHHHHHhC--CCCCEEEE
Confidence            578999999 68999999998888999999988887776655 3345421 2233331223333332222  26999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       240 ~~g  242 (345)
T cd08260         240 ALG  242 (345)
T ss_pred             cCC
Confidence            765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.05  E-value=0.21  Score=43.92  Aligned_cols=116  Identities=15%  Similarity=0.063  Sum_probs=65.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecch--HHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADILD--ELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      -++.|+|++|.+|.+++..|+..|.       .+++.+..+  +.++....++. ..+..  ..+. .+   .....+..
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~--~~~~-~i---~~~~~~~~   77 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPL--LAGV-VA---TTDPEEAF   77 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccc--cCCc-EE---ecChHHHh
Confidence            3589999999999999999998884       688988854  22222221111 11000  0000 00   01112233


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-CcEEEEecC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-KGSIICTSS  150 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS  150 (278)
                      ...|++|..||...  ++  ..+   =.+.++.|+.    +++.+.+.+.+... ++.++++|-
T Consensus        78 ~daDvVVitAG~~~--k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        78 KDVDAALLVGAFPR--KP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             CCCCEEEEeCCCCC--CC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            47899999999742  22  222   2345555554    45556666665443 667777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.05  E-value=0.36  Score=41.50  Aligned_cols=105  Identities=19%  Similarity=0.235  Sum_probs=71.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +|++++|.||+|..|. ++-+|++ .|+.|+..+-+.++...+..+++.. ...|--++..+.+++.+...  ..||+.+
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d-~afNYK~e~~~~~aL~r~~P--~GIDiYf  228 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD-DAFNYKEESDLSAALKRCFP--EGIDIYF  228 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhccCCc-cceeccCccCHHHHHHHhCC--CcceEEE
Confidence            5799999999999998 5555555 6999999888888887777665522 11233333345555544322  2699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      -|.|-                           .++.+.+..|..   .|||+.-+-++.+
T Consensus       229 eNVGG---------------------------~~lDavl~nM~~---~gri~~CG~ISqY  258 (343)
T KOG1196|consen  229 ENVGG---------------------------KMLDAVLLNMNL---HGRIAVCGMISQY  258 (343)
T ss_pred             eccCc---------------------------HHHHHHHHhhhh---ccceEeeeeehhc
Confidence            99884                           245556666765   5789887766654

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.04  E-value=0.14  Score=44.02  Aligned_cols=47  Identities=28%  Similarity=0.428  Sum_probs=39.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG   63 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~   63 (278)
                      .+.+++|+|+++++|.+++..+...|++|+.+++++++.+.+.+ .+.
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~  178 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGA  178 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC
Confidence            58899999999999999999999999999999888777666544 554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.02  E-value=0.3  Score=42.96  Aligned_cols=117  Identities=17%  Similarity=0.217  Sum_probs=67.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHH----hhh---CCe-EEEecCCCHHHHHHHHHHHHhhc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALA----STI---GGR-YIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~----~~~---~~~-~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+++.|.|| |.+|..++..++..|. .|++.+.+++......    ...   +.. -+.. .+|.   +        ..
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-~~d~---~--------~l   72 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-TNNY---E--------DI   72 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-CCCH---H--------Hh
Confidence            468999995 8899999999999994 8999998776432111    110   000 1111 0121   1        12


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ...|++|..+|....... .+.+++. .+.+..|+    .+.+.+.+.+.+...++.++++|-..
T Consensus        73 ~~aDiVI~tag~~~~~~~-~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 AGSDVVIVTAGLTKRPGK-SDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             CCCCEEEECCCCCCCCCC-CcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            368999999987533211 1111111 33444454    35667777776644456777776544

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.99  E-value=0.094  Score=41.03  Aligned_cols=42  Identities=24%  Similarity=0.322  Sum_probs=31.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA   55 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~   55 (278)
                      ..+.||+++|.| -|.+|+.+|+.|...|++|++++.++-+.-
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            357899999998 478999999999999999999998875443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02928 oxidoreductase family protein

Probab=94.97  E-value=0.22  Score=44.28  Aligned_cols=37  Identities=27%  Similarity=0.303  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ..+.||++.|.|. |.||+++|+.|...|++|+..+|.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4689999999997 899999999999999999999886

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.94  E-value=0.089  Score=42.15  Aligned_cols=41  Identities=22%  Similarity=0.273  Sum_probs=33.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      +|.|.|+ |-+|+.+|..++..|++|++.+++++.++...+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            4678888 9999999999999999999999998877665543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=94.92  E-value=0.2  Score=43.56  Aligned_cols=76  Identities=16%  Similarity=0.201  Sum_probs=49.7

Q ss_pred             CCc-EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGK-VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k-~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+. +++|.|+++.+|.++++.+...|++|+++.++++..+.+ +..++.. ..+..+..   ..++.+.  .+++|.++
T Consensus       144 ~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~---~~~~~~~--~~~~d~vl  216 (323)
T TIGR02823       144 PEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASE-VIDREDLS---PPGKPLE--KERWAGAV  216 (323)
T ss_pred             CCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcE-EEccccHH---HHHHHhc--CCCceEEE
Confidence            356 999999999999999999999999999887776665444 4445322 12222222   1222221  23589988


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       217 d~~g  220 (323)
T TIGR02823       217 DTVG  220 (323)
T ss_pred             ECcc
Confidence            8865

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.92  E-value=0.18  Score=41.96  Aligned_cols=35  Identities=26%  Similarity=0.516  Sum_probs=29.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEec
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADI   49 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r   49 (278)
                      .|++++|+|.| .||+|.+++..|++.|. ++++++.
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            57788999998 67999999999999997 6667643

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.90  E-value=0.85  Score=42.66  Aligned_cols=124  Identities=17%  Similarity=0.196  Sum_probs=68.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++++|.++|.|. |+.|.++|+.|.++|+.|.+.+....  ....+.+.. ++.+...+.. ++    .+       ..
T Consensus         3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~-~~----~~-------~~   69 (498)
T PRK02006          3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFD-PA----LL-------DG   69 (498)
T ss_pred             cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCc-hh----Hh-------cC
Confidence            3467888999994 57888999999999999999886432  222232211 2233222211 11    12       15


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFL--LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      .|.+|..+|+...    .+.....+.+.  ..+.+.+-..++..++..+........+|.|+...+
T Consensus        70 ~d~vv~sp~I~~~----~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnG  131 (498)
T PRK02006         70 VDLVALSPGLSPL----EAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNG  131 (498)
T ss_pred             CCEEEECCCCCCc----ccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCc
Confidence            7999999987421    11111223222  345666666665555554432211225666655554

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=94.90  E-value=0.21  Score=43.82  Aligned_cols=78  Identities=23%  Similarity=0.343  Sum_probs=49.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|+| ++++|.++++.+...|++ |+++.++++....+ ..++... ..|-.+.+..+.+. .... ..++|+++
T Consensus       165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~-~~~~~~~~~~~~i~-~~~~-~~~vd~vl  239 (343)
T cd08235         165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADY-TIDAAEEDLVEKVR-ELTD-GRGADVVI  239 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcE-EecCCccCHHHHHH-HHhC-CcCCCEEE
Confidence            578999996 689999999988888999 87777777666555 3444322 12322332222222 2111 12499999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      ++.+
T Consensus       240 d~~~  243 (343)
T cd08235         240 VATG  243 (343)
T ss_pred             ECCC
Confidence            9876

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.88  E-value=0.29  Score=43.29  Aligned_cols=39  Identities=26%  Similarity=0.192  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE   52 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~   52 (278)
                      ..+.||++.|.|. |.||+.+|+.|...|++|+..+|...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4789999999998 99999999999999999999888643

>PLN02602 lactate dehydrogenase

Probab=94.88  E-value=0.32  Score=43.30  Aligned_cols=115  Identities=11%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-Ce-EE-EecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GR-YI-HCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~-~~-~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++.|+|+ |.+|.++|..|+..+.  .+++.+.+++.+.....++. .. +. ...+....+.+        ....-|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~--------~~~daDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA--------VTAGSDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH--------HhCCCCE
Confidence            68999996 9999999999998875  68899987765543332221 00 00 01221100111        1237999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      +|..||....  +  ..+..   +.+..|+    .+++.+.+.+.+...++.++++|-..
T Consensus       109 VVitAG~~~k--~--g~tR~---dll~~N~----~I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        109 CIVTAGARQI--P--GESRL---NLLQRNV----ALFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             EEECCCCCCC--c--CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCch
Confidence            9999996422  2  22322   3344443    34555666665544467788877544

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=94.86  E-value=0.3  Score=41.16  Aligned_cols=80  Identities=20%  Similarity=0.216  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|.|+++++|..+++.+...|++|+.+.++.+....+.+... .. ...|-.+.+..+++.+ ... -.++|.++
T Consensus       108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~d~vi  184 (293)
T cd05195         108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVD-HIFSSRDLSFADGILR-ATG-GRGVDVVL  184 (293)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcc-eEeecCchhHHHHHHH-HhC-CCCceEEE
Confidence            57899999999999999988888889999999887766655543221 11 1123223222222222 111 12589999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      .+.|
T Consensus       185 ~~~~  188 (293)
T cd05195         185 NSLS  188 (293)
T ss_pred             eCCC
Confidence            7765

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.85  E-value=0.082  Score=45.30  Aligned_cols=44  Identities=25%  Similarity=0.311  Sum_probs=38.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI   61 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~   61 (278)
                      +++++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+.+.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999996 9999999999999997 5999999998888877654

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=94.80  E-value=0.21  Score=44.00  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~   92 (278)
                      .+.+++|+|+ +++|.++++.+...|++ |+++.+++++.+.+ +..+...+ .|..+.+. ..+.+++.+..  +++|+
T Consensus       162 ~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~-~~~~~~~~~~~~~~~~d~  237 (343)
T cd05285         162 PGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHT-VNVRTEDT-PESAEKIAELLGGKGPDV  237 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEE-eccccccc-hhHHHHHHHHhCCCCCCE
Confidence            5789999864 79999998888889998 88887777665544 33343211 23222221 11122222222  25999


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      ++.+.|
T Consensus       238 vld~~g  243 (343)
T cd05285         238 VIECTG  243 (343)
T ss_pred             EEECCC
Confidence            999876

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=94.79  E-value=0.22  Score=42.94  Aligned_cols=78  Identities=26%  Similarity=0.305  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|+| ++++|.++++.+.+.|++ |+++++.+++.+ +.+.+++..+. +- +..+..+.+.+... ..++|+++
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~g~~~~~-~~-~~~~~~~~l~~~~~-~~~vd~vl  203 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LARELGATEVV-TD-DSEAIVERVRELTG-GAGADVVI  203 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCceEe-cC-CCcCHHHHHHHHcC-CCCCCEEE
Confidence            467899996 689999999998899999 888888776655 44444532211 21 12222222222221 12599999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      ++.|
T Consensus       204 d~~g  207 (312)
T cd08269         204 EAVG  207 (312)
T ss_pred             ECCC
Confidence            9875

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08251 polyketide_synthase polyketide synthase

Probab=94.77  E-value=0.22  Score=42.49  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|..+++.+...|++|+.+.+..+..+.+ ...++..+ .|....+...+ +..... ..++|.++.
T Consensus       120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~-i~~~~~-~~~~d~v~~  195 (303)
T cd08251         120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHV-INYVEEDFEEE-IMRLTG-GRGVDVVIN  195 (303)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEE-EeCCCccHHHH-HHHHcC-CCCceEEEE
Confidence            468999999999999999998889999999988887766665 44454221 23322222222 222221 125898887


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.+
T Consensus       196 ~~~  198 (303)
T cd08251         196 TLS  198 (303)
T ss_pred             CCc
Confidence            653

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.76  E-value=0.57  Score=41.01  Aligned_cols=116  Identities=14%  Similarity=0.221  Sum_probs=68.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-Ce-EEE-ecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GR-YIH-CDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~-~~~-~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++.|+|+ |.+|..+|..|+..|.  .+++.+.+++.......++. .. +.. ..+....+.+.        ....|+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~--------~~~adi   74 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSV--------TANSKV   74 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHH--------hCCCCE
Confidence            57899996 9999999999998874  68999987665544333222 10 000 01111011111        237999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +|..||....  +  ..+..   +.++.|+    -+++.+.+.+.+...++.++++|-...
T Consensus        75 vvitaG~~~k--~--g~~R~---dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          75 VIVTAGARQN--E--GESRL---DLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             EEECCCCCCC--C--CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChHH
Confidence            9999996422  2  23332   3444444    345666666665444678888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.76  E-value=0.23  Score=44.37  Aligned_cols=35  Identities=29%  Similarity=0.451  Sum_probs=30.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEec
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADI   49 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r   49 (278)
                      .|++++|+|.|+ ||+|.+++..|+..|. ++.+++.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~   60 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDD   60 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence            577889999988 8999999999999997 6777653

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.74  E-value=0.21  Score=43.79  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----HHHHHHHhhhCCeEEEecCCCH--HHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD----ELGAALASTIGGRYIHCDVTKE--EDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----~~~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~   89 (278)
                      .++++||.|+++++|.++++.+...|++|+++.+..    +..+.+ .+++...+. +..+.  ++..+.+.....  ++
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~i~~~~~--~~  221 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVL-TEEELRSLLATELLKSAPG--GR  221 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEE-eCcccccccHHHHHHHHcC--CC
Confidence            578999999999999999999999999998877654    333333 344433221 22211  122222322211  25


Q ss_pred             ccEEEECCc
Q 023708           90 LDIMFNNAG   98 (278)
Q Consensus        90 id~li~nag   98 (278)
                      +|.++.+.|
T Consensus       222 ~d~vld~~g  230 (341)
T cd08290         222 PKLALNCVG  230 (341)
T ss_pred             ceEEEECcC
Confidence            899998876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.74  E-value=0.14  Score=43.92  Aligned_cols=79  Identities=18%  Similarity=0.236  Sum_probs=51.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      -++.||.+.|.|-|+-+|+-++..|.++|++|.++....+...+..++..  .+-.-+.++..++..+       -+...
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~AD--IVI~avg~~~~v~~~~-------ik~Ga  224 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKAD--ILVVAIGRGHFVTKEF-------VKEGA  224 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCC--EEEEecCccccCCHHH-------ccCCc
Confidence            36899999999999999999999999999999987443333444433333  3333334444333321       13455


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      +|...|+.
T Consensus       225 vVIDvgin  232 (284)
T PRK14179        225 VVIDVGMN  232 (284)
T ss_pred             EEEEecce
Confidence            56566654

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.72  E-value=0.26  Score=43.86  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.| .+++|..+++.+...|++|+++++++++.....+.++...+ .+-.+.+.+.+       ..+.+|+++.
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~-------~~~~~D~vid  250 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDY-LVSSDAAEMQE-------AADSLDYIID  250 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEE-ecCCChHHHHH-------hcCCCcEEEE
Confidence            578899996 59999999888888899998888877666555555554322 23233322221       1236899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       251 ~~g  253 (357)
T PLN02514        251 TVP  253 (357)
T ss_pred             CCC
Confidence            876

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=94.69  E-value=0.23  Score=43.46  Aligned_cols=76  Identities=20%  Similarity=0.280  Sum_probs=51.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +.+++|.|+++++|..+++.+...| ++|++++++.++.+.+ .+++...+ .|..+  +..+.+...  ..+++|.++.
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~-~~~~~--~~~~~i~~~--~~~~~d~vl~  223 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHV-INHHQ--DLAEQLEAL--GIEPVDYIFC  223 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEE-EeCCc--cHHHHHHhh--CCCCCCEEEE
Confidence            7899999999999999999988999 9999988877766555 44554322 23221  122222221  1136999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       224 ~~~  226 (336)
T cd08252         224 LTD  226 (336)
T ss_pred             ccC
Confidence            876

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.68  E-value=0.25  Score=42.66  Aligned_cols=77  Identities=25%  Similarity=0.379  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+. ++.+.+ ...+...+ .+....  ..+.+.+... -..+|.+++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~-~~~~~~--~~~~~~~~~~-~~~~d~v~~  217 (326)
T cd08272         144 AGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPI-IYYRET--VVEYVAEHTG-GRGFDVVFD  217 (326)
T ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEE-Eecchh--HHHHHHHhcC-CCCCcEEEE
Confidence            57899999999999999999999999999988877 555555 33443221 122221  2222222111 125899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       218 ~~~  220 (326)
T cd08272         218 TVG  220 (326)
T ss_pred             CCC
Confidence            765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	278
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		5e-39
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		6e-28
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-26
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-22
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		4e-22
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-21
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-21
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-20
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		4e-20
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		5e-20
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-19
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-19
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-18
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-18
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-18
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-18
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-18
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-17
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-17
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-17
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-17
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-17
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-17
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		5e-17
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		5e-17
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		6e-17
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-16
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-16
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		1e-16
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-16
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-16
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-16
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		5e-16
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-16
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		7e-16
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		8e-16
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-15
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		1e-15
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-15
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-15
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-15
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-15
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-15
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-15
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-15
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-15
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-15
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-15
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-15
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		6e-15
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-15
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		9e-15
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-14
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-14
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-14
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-14
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-14
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-14
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-14
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-14
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-14
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		4e-14
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		5e-14
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		6e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		7e-14
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-13
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-13
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-13
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-13
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-13
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-13
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		4e-13
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-13
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-13
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		5e-13
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-13
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		6e-13
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		7e-13
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		8e-13
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		9e-13
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-12
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-12
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-12
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-12
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-12
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-12
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-12
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		3e-12
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		4e-12
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		4e-12
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-12
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-12
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-12
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		7e-12
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		7e-12
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		8e-12
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		8e-12
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-11
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-11
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-11
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-11
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-11
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-11
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		3e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-11
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-11
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-11
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		4e-11
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		5e-11
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		6e-11
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		6e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		6e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		7e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		8e-11
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		8e-11
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		8e-11
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-11
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-11
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		1e-10
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-10
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-10
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-10
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-10
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-10
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-10
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-10
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-10
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-10
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-10
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		5e-10
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		5e-10
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-10
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		5e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		5e-10
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		6e-10
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		6e-10
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		6e-10
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-10
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		6e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		7e-10
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		9e-10
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		9e-10
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		9e-10
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-09
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-09
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-09
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-09
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-09
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-09
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-09
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-09
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		2e-09
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-09
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-09
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-09
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		4e-09
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-09
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		6e-09
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		7e-09
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		7e-09
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		9e-09
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-08
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-08
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-08
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-08
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-08
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-08
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-08
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-08
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		4e-08
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		4e-08
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-08
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-08
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		6e-08
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		7e-08
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-08
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		8e-08
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		9e-08
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		9e-08
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		9e-08
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-07
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-07
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-07
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-07
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-07
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		3e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		3e-07
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-07
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		4e-07
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		7e-07
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-06
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-06
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-06
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		4e-06
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		7e-06
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		9e-06
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-05
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		1e-05
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-05
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		1e-05
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		1e-05
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		1e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		2e-05
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-05
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		3e-05
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		3e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-05
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		5e-05
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		5e-05
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		7e-05
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		8e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		8e-05
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-04
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		1e-04
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		2e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		3e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-04
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		4e-04
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		5e-04
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		7e-04
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		7e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  157 bits (398), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 143/268 (53%), Gaps = 17/268 (6%)
Query: 7   TNKLSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGG--- 63
           T   S+ RL  K                KLF   GA +VIADI D+ G  + + IG    
Sbjct: 6   TPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV 65
Query: 64  -RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA-XXXXXXXXXXXLNMEDVKFLLSVN 121
             ++HCDVTK+EDV + V   ++  G+LDIMF N                ED K ++ +N
Sbjct: 66  ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 125
Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEAIIGLARSTACE 180
           + G     KHAA+ MI   +KGSI+ T+S ++   G   SH Y+ +K A++GL  S   E
Sbjct: 126 VYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 184
Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD-SGSLLRGRSASIED 239
           LG++GIRVNC+SP+ V S +L + +    G    + EE+     +  G+LLR      ED
Sbjct: 185 LGEYGIRVNCVSPYIVASPLLTDVF----GVDSSRVEELAHQAANLKGTLLRA-----ED 235
Query: 240 VAQAALFLASEEAGFITAHNLVIDGGYT 267
           VA A  +LA +E+ +++  NLVIDGGYT
Sbjct: 236 VADAVAYLAGDESKYVSGLNLVIDGGYT 263

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELG--AALASTIGGRYIHCD 69
           S RLTGK                +     GA +V  DILDE G   A       RY+H D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61
Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGI 129
           VT+    ++AV  AV+  G L ++ NNA             + + + +L VNL G+  GI
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED-YALTEWQRILDVNLTGVFLGI 120
Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +   K M E  R GSII  SS   + G +A H Y+ +K A+ GL +STA ELG  GIRVN
Sbjct: 121 RAVVKPMKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I P  V + M            D  PE++ +          GR+A   +V+   ++LAS
Sbjct: 180 SIHPGLVKTPM-----------TDWVPEDIFQTA-------LGRAAEPVEVSNLVVYLAS 221
Query: 250 EEAGFITAHNLVIDGGYTTGTSSMSF 275
           +E+ + T    V+DGG   G +   F
Sbjct: 222 DESSYSTGAEFVVDGGTVAGLAHNDF 247

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELG--AALASTIGGRYIHCD 69
           S RLTGK                +     GA +V  DILDE G   A       RY+H D
Sbjct: 2   SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLD 61
Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGI 129
           VT+    ++AV  AV+  G L ++ NNA             + + + +L VNL G+  GI
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED-YALTEWQRILDVNLTGVFLGI 120
Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +   K   E  R GSII  SS   + G +A H Y+ +K A+ GL +STA ELG  GIRVN
Sbjct: 121 RAVVKPXKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I P  V +              D  PE++ +          GR+A   +V+   ++LAS
Sbjct: 180 SIHPGLVKTPX-----------TDWVPEDIFQTA-------LGRAAEPVEVSNLVVYLAS 221
Query: 250 EEAGFITAHNLVIDGGYTTGTSSMSF 275
           +E+ + T    V+DGG   G +   F
Sbjct: 222 DESSYSTGAEFVVDGGTVAGLAHNDF 247

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 17/240 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTKEEDVESAVRLAVSWKGQLDI 92
           +LFA+NGA++V+AD+ ++    +A+ IG +   +  DV+  +D ES V    +  G++D+
Sbjct: 45  ELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDV 104
Query: 93  MFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK---GSIICTS 149
           + NNA           +  E    + SVN+ GI       +K +I   R+   GSII T+
Sbjct: 105 LVNNAGFGTTGNVVT-IPEETWDRIXSVNVKGIFL----CSKYVIPVXRRNGGGSIINTT 159
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S  A        AY  SK AI  L R+ A +  K GIRVN ++P  + S      + +  
Sbjct: 160 SYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAK 219
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG 269
             A ++ +   + V D       R  + E++A+A LFLAS+ + F T   L +DGG + G
Sbjct: 220 DPAKLRSDFNARAVXD-------RXGTAEEIAEAXLFLASDRSRFATGSILTVDGGSSIG 272

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 19/232 (8%)
Query: 43  HIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXX 100
            +V+AD+LDE GAA A  +G   RY H DVT EED +  V  A    G +D + NNA   
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS 90
Query: 101 XXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS 160
                    ++E  + ++ +NL G+  G+K    AM +    GSI+  SS+A +MG   +
Sbjct: 91  TGMFLETE-SVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALT 148
Query: 161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV-NAYRKYLGKADMKPEEV 219
            +Y  SK  + GL++  A ELG   IRVN + P    + M      R+  G     P   
Sbjct: 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTP--- 205
Query: 220 CKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS 271
                       GR     ++A A + L S+ + ++T   L +DGG+TTG +
Sbjct: 206 -----------MGRVGEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTGPT 246

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 16/231 (6%)
Query: 43  HIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXX 100
            +V+AD+LDE GAA A  +G   RY H DVT EED +  V  A    G +D + NNA   
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS 90
Query: 101 XXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS 160
                    ++E  + ++ +NL G+  G+K    AM +    GSI+  SS+A +MG   +
Sbjct: 91  TGMFLETE-SVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALT 148
Query: 161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC 220
            +Y  SK  + GL++  A ELG   IRVN + P    + M      +  G+ +     + 
Sbjct: 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ-GEGNYPNTPMG 207
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS 271
           ++  + G           ++A A + L S+ + ++T   L +DGG+TTG +
Sbjct: 208 RVGNEPG-----------EIAGAVVKLLSDTSSYVTGAELAVDGGWTTGPT 247

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRY-----IHCDVTKEEDVESAVRLAVSWKGQ 89
           K FA N + +V  ++L++    +   + G       +  DV+K++DVE  VR       +
Sbjct: 25  KKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +D++ NNA           ++ E  + +L+VNL    +  +     M++ Q KG I+ T+
Sbjct: 85  IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK-QGKGVIVNTA 143
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S A I GG A   Y+++K  +IGL RS A   G  GIR   + P  V +          +
Sbjct: 144 SIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN---------I 194
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
           G    KP E+          L  R A  ED+A   +FLAS+EA F+    +V+DGG T 
Sbjct: 195 GLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV 253

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 112/254 (44%), Gaps = 5/254 (1%)
Query: 14  RLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVT 71
           RL GK                + +   GA + IADI  E   A A+ IG     I  DVT
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61
Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKH 131
            +  ++  V   +   G +DI+ NNA           +  E    L ++N++G L  ++ 
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE-ITRESYDRLFAINVSGTLFMMQA 120
Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
            A+AMI G R G II  +S A   G      Y  +K A+I L +S    L +HGI VN I
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 180
Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  V  E       K+    ++   E  + V    ++  GR    ED+   A+FLA+ E
Sbjct: 181 APGVVDGEHWDGVDAKFADYENLPRGEKKRQV--GAAVPFGRMGRAEDLTGMAIFLATPE 238
Query: 252 AGFITAHNLVIDGG 265
           A +I A    +DGG
Sbjct: 239 ADYIVAQTYNVDGG 252

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
            DV   + +++AV   V   G+LDI+  NA            + ED   ++ +NL G+  
Sbjct: 83  VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWK 142
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA----YSLSKEAIIGLARSTACELGK 183
            +K     MI G R GSII TSS    +GGL ++     Y  +K  ++GL R+   ELG+
Sbjct: 143 TVKAGVPHMIAGGRGGSIILTSS----VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQ 198
Query: 184 HGIRVNCISPHGVPSEMLVNA-----YRKYL---GKADMKPEEVCKMVRDSGSLLRGRSA 235
           H IRVN + P  V + ML N      +R  L   G  DM P  +C+M       L     
Sbjct: 199 HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP--ICQMFH----TLPIPWV 252
Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              D++ A LF AS+EA +IT   L ID G
Sbjct: 253 EPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 115/238 (48%), Gaps = 16/238 (6%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF 94
           +LFA+ GA +V  DI +      A  +G   +  DV     VE     A++  G+LD + 
Sbjct: 23  ELFAKEGARLVACDIEEGPLREAAEAVGAHPVVXDVADPASVERGFAEALAHLGRLDGVV 82
Query: 95  NNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI 154
           + A             +ED + +L VNL G     K A++A  E +  GSI+ T+S    
Sbjct: 83  HYAGITRDNFHWKX-PLEDWELVLRVNLTGSFLVAKAASEAXRE-KNPGSIVLTASRV-Y 139
Query: 155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM 214
           +G L    Y+ S   ++GL R+ A ELG+ GIRVN ++P  + +                
Sbjct: 140 LGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXTAKV---------- 189
Query: 215 KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSS 272
            PE+V +    +  L  GR+    +VA AALFL S+E+ FIT   L +DGG T G + 
Sbjct: 190 -PEKVREKAIAATPL--GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTIGAAP 244

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN 96
           FA  GA + + D+  E G  +A  IGG +   D+  E +    V  A    G++D++ NN
Sbjct: 26  FAREGALVALCDLRPE-GKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 84
Query: 97  AXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK---GSIICTSSSAA 153
           A           + + + + +L VNL   +H    AA+ M    RK   G+I+  +S   
Sbjct: 85  AAIAAPGSALT-VRLPEWRRVLEVNLTAPMHLSALAAREM----RKVGGGAIVNVASVQG 139
Query: 154 IMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD 213
           +     + AY+ SK  ++ L RS A +L    IRVN ++P  + +E ++ A         
Sbjct: 140 LFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAI-----ALS 194
Query: 214 MKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             PE   +   D  +L R G+    E+VA+A LFLASE+A FIT   L +DGG T
Sbjct: 195 PDPERTRRDWEDLHALRRLGKP---EEVAEAVLFLASEKASFITGAILPVDGGMT 246

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 37  FAENGAHIVIADILDELGAA---------LASTI------GGRYI--HCDVTKEEDVESA 79
            A  GA I+  D+  +L            LA T+      G R I    DV   + +++A
Sbjct: 48  LAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107
Query: 80  VRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           V   V+  G+LDI+  NA           ++ +  + ++ VNLNG     + A   ++ G
Sbjct: 108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG 167
Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
           +R GSI+ TSS   + G      Y  SK  + GL R+ A ELG   IRVN + P  V + 
Sbjct: 168 KRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATP 227
Query: 200 MLVN--AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITA 257
           ML+N   YR +    +    E  ++      +L        D++ A LFL S++A +IT 
Sbjct: 228 MLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITG 287
Query: 258 HNLVIDGG 265
            +L +DGG
Sbjct: 288 VSLPVDGG 295

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 37  FAENGAHIVIADILDE-LGAALAST----IGGRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
            AE G  I + D+  E L  A AS     +  R   CDVT EE V   V   V   G++D
Sbjct: 27  LAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKID 86
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
            +FNNA              +D   +L++N+ G  H +K  ++ MI  Q  G I+ T+S 
Sbjct: 87  FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT-QNYGRIVNTASM 145
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP----HGVPSEMLVNAYRK 207
           A + G     AY  SK AII L  + A +L  + IRVN ISP     G   E  V    K
Sbjct: 146 AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAK 205
Query: 208 YLGKA-DMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +     P+ V + +   GS+   R   I ++     FL  +++ F+T  NL I GG
Sbjct: 206 VGSQYFSTDPKVVAQQM--IGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
             DV   E ++SAV   V   G+LDI+  NA           +     + ++ +NL G+ 
Sbjct: 82  QVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVW 141
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA----YSLSKEAIIGLARSTACELG 182
           H +K     ++ G R GSI+ TSS    +GG  ++     Y  +K  +IGL R+ A ELG
Sbjct: 142 HTVKAGVPHVLSGGRGGSIVLTSS----VGGRKAYPNTGHYIAAKHGVIGLMRAFAVELG 197
Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK---PEEVCKMVRDSGSLLRGRSASIED 239
            H IRVN + P  V + M++N     L + D++   P++   + +   +L         D
Sbjct: 198 PHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPV-PWVDASD 256
Query: 240 VAQAALFLASEEAGFITAHNLVIDGG 265
           ++ A LFLAS+E+ ++T  +L +D G
Sbjct: 257 ISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
            DV+ E  VE+ V       G++D  FNNA               +   ++S+NL G+  
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G++   K M E Q  G ++ T+S   I G      Y+ +K  ++GL R++A E G++GIR
Sbjct: 131 GLEKVLKIMRE-QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           +N I+P  + + M+ N+ ++   +   K  E    V  S      R     ++A    FL
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-----KRYGEAPEIAAVVAFL 244
Query: 248 ASEEAGFITAHNLVIDGG 265
            S++A ++ A  + IDGG
Sbjct: 245 LSDDASYVNATVVPIDGG 262

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 27/244 (11%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDIM 93
           + F  +GA +VI D  +  G AL   + G  +I CDVT+E+DV++ V   +   G+LD +
Sbjct: 27  RAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86
Query: 94  FNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA 153
            NNA            + +  + LL +NL G     K A   + + Q  G++I  SS   
Sbjct: 87  VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVG 144
Query: 154 IMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD 213
            +G   +  Y  +K A+  + ++ A +   +G+RVNCISP  + + +             
Sbjct: 145 AIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW------------ 192
Query: 214 MKPEEVCKMVRDSGSLLR--------GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              EE+  ++ D  + +R        GR     +V  AA+FLAS EA F T   L++ GG
Sbjct: 193 ---EELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248
Query: 266 YTTG 269
              G
Sbjct: 249 AELG 252

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G+LDI+  NA           +  ED + ++ +N+ G  + +   A  +IEG R GSII 
Sbjct: 100 GRLDIIVANAGVAAPQAWDD-ITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIIL 158
Query: 148 TSSSAAI-MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR 206
            SS+A + M     H Y+ SK A+ GLAR+ A ELGKH IRVN + P  V + M      
Sbjct: 159 ISSAAGMKMQPFMIH-YTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMV 217
Query: 207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             +G+A     ++  ++      L    A  ED+A    +LAS+E+  +TA  + +D G 
Sbjct: 218 TAVGQAMETNPQLSHVLT---PFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274
Query: 267 T 267
           T
Sbjct: 275 T 275

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 7/256 (2%)
Query: 13  KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDV 70
           KRL GK                + +   GA + IADI  E     A+ IG     +  DV
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDV 63
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T+++ +++A+   V   G LDI+ NNA           +  E  + L ++N+ G L  ++
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVE-ITRESYEKLFAINVAGTLFTLQ 122
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            AA+  I   R G II  +S A   G      Y  +K A+I L +S   +L KH I VN 
Sbjct: 123 AAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNA 182
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPE-EVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           I+P  V  E   +       + + +P  E  ++V ++     GR  + ED+   A+FLAS
Sbjct: 183 IAPGVVDGEHW-DGVDALFARYENRPRGEKKRLVGEAVPF--GRXGTAEDLTGXAIFLAS 239
Query: 250 EEAGFITAHNLVIDGG 265
            E+ +I +    +DGG
Sbjct: 240 AESDYIVSQTYNVDGG 255

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 116/252 (46%), Gaps = 31/252 (12%)
Query: 37  FAENGAHIVIADILDELGAA---------LAST------IGGRYI--HCDVTKEEDVESA 79
            A +GA I+  D+ D++ +          LA+T      IG R +    DV   E + +A
Sbjct: 33  LAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92
Query: 80  VRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           ++  +   G+LDI+  NA               DV   + VNL G+ H IK A   +++ 
Sbjct: 93  LQAGLDELGRLDIVVANAGIAPMSAGDD--GWHDV---IDVNLTGVYHTIKVAIPTLVKQ 147
Query: 140 QRKGSIICTSSSAAIMG----GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
              GSI+  SSSA + G       S  Y  +K  ++GL R  A  L    IRVN I P G
Sbjct: 148 GTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSG 207
Query: 196 VPSEMLVNAY-RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
           V + M+ N + R++L K     +    M    G+ +     + EDVA A  +L S++A +
Sbjct: 208 VETPMINNEFTREWLAKMAAATDTPGAM----GNAMPVEVLAPEDVANAVAWLVSDQARY 263
Query: 255 ITAHNLVIDGGY 266
           IT   L +D G+
Sbjct: 264 ITGVTLPVDAGF 275

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           + CD+T  E VE A +      G ++++  NA           ++ ED   ++  NL G 
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMR-MSEEDFTSVVETNLTGT 122
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
              +K A +AM+   +KG ++  SS   ++G      Y+ SK  ++G ARS A ELG   
Sbjct: 123 FRVVKRANRAMLRA-KKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRN 181
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I  N ++P  V ++M             +  E+   +V     +  GR A  E++A    
Sbjct: 182 ITFNVVAPGFVDTDM----------TKVLTDEQRANIV---SQVPLGRYARPEEIAATVR 228
Query: 246 FLASEEAGFITAHNLVIDGGYTTG 269
           FLAS++A +IT   + +DGG   G
Sbjct: 229 FLASDDASYITGAVIPVDGGLGMG 252

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 26/240 (10%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN 96
           FA  GA ++  DI +     L    G +    DVTK++ ++           +LD++FN 
Sbjct: 26  FAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV----ERLDVLFNV 81
Query: 97  AXXXXXXXXXXXLNMEDVKFLLSVNLN--GILHGIKHAAKAMIEGQRKGSIICTSSSAAI 154
           A           L+ E+  +  S+NLN   +   IK     M+  Q+ G+II  SS A+ 
Sbjct: 82  AGFVHHGTV---LDCEEKDWDFSMNLNVRSMYLMIKAFLPKML-AQKSGNIINMSSVASS 137
Query: 155 MGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD 213
           + G+ +   YS +K A+IGL +S A +  + GIR NC+ P  V +  L         +A 
Sbjct: 138 VKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI-----QAR 192
Query: 214 MKPEEVCKMVRDSGSLLR----GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG 269
             PEE           L+    GR A+ E++A   ++LAS+E+ ++T + ++IDGG++ G
Sbjct: 193 GNPEEA------RNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSLG 246

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 37  FAENGAHIVIADILDELGAALASTI---GGRYI--HCDVTKEEDVESAVRLAVSWKGQLD 91
           FA+ GA +V+ D+  E   A+A+ I   GG+ I   C+VT E+  E+ ++ A+   G++ 
Sbjct: 32  FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           ++ NNA           + M D ++   +NL  +    + AA  M +    G+I+  SS 
Sbjct: 92  VLVNNAGGGGPKPFD--MPMSDFEWAFKLNLFSLFRLSQLAAPHM-QKAGGGAILNISSM 148
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
           A     +   +Y  SK A+  L R+ A ++G  GIRVN I+P  + ++ L       + +
Sbjct: 149 AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIER 208
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A +K   +            GR    +D+A AALFL S  A +I+   L + GG
Sbjct: 209 AMLKHTPL------------GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 41  GAHIVIADILDELGA-ALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
           GA + IAD LD + A A+ + +  GG  +  DVTK   V++A++ A+   G  D++  NA
Sbjct: 36  GATVAIAD-LDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANA 94
Query: 98  XXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG 157
                       + E+  F   VN  G+    + A +  +    KG I+ T+S AA +G 
Sbjct: 95  GVSTMRPAVDITD-EEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153
Query: 158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD---M 214
                YS SK A+ G  ++ A E+    IRVNC+ P  V + M     R+ + +A+   M
Sbjct: 154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM---QEREIIWEAELRGM 210
Query: 215 KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            PE V         L  GR    EDVA   +FLAS+ A F+T   + + GG
Sbjct: 211 TPEAVRAEYVSLTPL--GRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           DV   EDVE+ V+ A+   G++DI+ NNA           ++ +D   +L+ NL      
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLK-MSEKDWDDVLNTNLKSAYLC 121
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K  +K M++ Q+ G II  +S A I+G      Y+ SK  +IG  +S A E    GI  
Sbjct: 122 TKAVSKIMLK-QKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + ++M            D+ P++V +M  ++  L   R  + E+VA    FLA
Sbjct: 181 NAVAPGIIKTDM-----------TDVLPDKVKEMYLNNIPL--KRFGTPEEVANVVGFLA 227
Query: 249 SEEAGFITAHNLVIDGG 265
           S+++ +IT   + IDGG
Sbjct: 228 SDDSNYITGQVINIDGG 244

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 118/274 (43%), Gaps = 22/274 (8%)
Query: 14  RLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVI--------ADILDELGAALASTIGGRY 65
           RL GK                 LFA  GA +V+        A++ DE+            
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA---AA 61
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           +  DV  E   E+ V LAV   G LD  FNNA           L++E  +  L  NL   
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKH 184
               K+   A I     GS+  TSS      G A  A Y+ SK  +IGL ++ A ELG  
Sbjct: 122 FLAAKYQVPA-IAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN + P G  ++   N +    G A     E    V    +L R   A  E++A+AA
Sbjct: 181 GIRVNALLPGG--TDTPAN-FANLPGAAP----ETRGFVEGLHALKR--IARPEEIAEAA 231
Query: 245 LFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           L+LAS+ A F+T   L+ DGG +   ++ +  +Q
Sbjct: 232 LYLASDGASFVTGAALLADGGASVTKAAENLYFQ 265

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLN--MEDVKFLLSVNLNGIL 126
           DV+K+E++   +   ++    +DI+ NNA            N   EDV   L  NLN + 
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDV---LRTNLNSLF 157
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           +  +  +K MI   R G II  SS   + G +    YS SK  +IG  +S A EL    I
Sbjct: 158 YITQPISKRMIN-NRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 216
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            VN I+P  + S+M            D   E++ K +    ++  GR  + E+VA  A F
Sbjct: 217 TVNAIAPGFISSDM-----------TDKISEQIKKNI--ISNIPAGRMGTPEEVANLACF 263
Query: 247 LASEEAGFITAHNLVIDGG 265
           L+S+++G+I     VIDGG
Sbjct: 264 LSSDKSGYINGRVFVIDGG 282

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           +  DVTKEEDV + V+ A+   G LD+M NNA           L++++   ++  NL G 
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNA-GVENPVPSHELSLDNWNKVIDTNLTGA 128
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             G + A K  +E   KG++I  SS   ++       Y+ SK  +  +  + A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I P  + + +    +   + +AD+  E +  M         G     E+VA  A 
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADV--ESMIPM---------GYIGKPEEVAAVAA 237
Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FLAS +A ++T   L  DGG T
Sbjct: 238 FLASSQASYVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           +  DVTKEEDV + V+ A+   G LD+M NNA           L++++   ++  NL G 
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNA-GVENPVPSHELSLDNWNKVIDTNLTGA 128
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             G + A K  +E   KG++I  SS   ++       Y+ SK  +  +  + A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I P  + + +    +   + +AD+  E +  M         G     E+VA  A 
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADV--ESMIPM---------GYIGKPEEVAAVAA 237
Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FLAS +A ++T   L  DGG T
Sbjct: 238 FLASSQASYVTGITLFADGGMT 259

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 54  GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMED 113
           G+ L + +G      ++ + E   + V  A    G LD + NNA           +  ED
Sbjct: 50  GSPLVAVLG-----ANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVR-MKDED 103
Query: 114 VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
            + +L  NL+ +    + A K M++  R G I+  +S   I+G      Y  SK  +IG 
Sbjct: 104 WEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGILGNPGQANYVASKAGLIGF 162
Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
            R+ A E  + GI VN ++P  + +EM            +  P+EV +       +  GR
Sbjct: 163 TRAVAKEYAQRGITVNAVAPGFIETEM-----------TERLPQEVKEAYLKQ--IPAGR 209
Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
               E+VA+A  FL SE+AG+IT   L +DGG T
Sbjct: 210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGLT 243

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           +  DVTKEEDV + V+ A+   G LD+M NNA           L++++   ++  NL G 
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNA-GVENPVPSHELSLDNWNKVIDTNLTGA 128
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             G + A K  +E   KG++I  SS   ++       Y+ SK  +  +  + A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I P  + + +    +   + +AD+  E +  M         G     E+VA  A 
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADV--ESMIPM---------GYIGKPEEVAAVAA 237
Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FLAS +A ++T   L  DGG T
Sbjct: 238 FLASSQASYVTGITLFADGGMT 259

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%)
Query: 37  FAENGAHIVIA----DILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQL 90
           +AE GA + +A    D L  +   +A  +GG+   I CDVT+ + V   +       G +
Sbjct: 52  YAEAGAQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           DI   NA           + +E+ + +   N+ G+    + AA+AM++    G+II T+S
Sbjct: 111 DIAVCNAGIVSVQAMLD-MPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS 169
Query: 151 SAAIMGGLASHA--YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY 208
            +  +  +      Y  SK A++ L ++ A EL  H IRVN +SP  + +E LV     Y
Sbjct: 170 MSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTE-LVEPLADY 228
Query: 209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              A  +P+           +  GR    E++    L+LAS  + ++T  ++VIDGGYT
Sbjct: 229 --HALWEPK-----------IPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 36  LFAENGAHIVIA--------DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK 87
           +FA  GA++ +A         +  ELG   A  + G  +  DV+       A R  V   
Sbjct: 60  VFARAGANVAVAARSPRELSSVTAELGELGAGNVIG--VRLDVSDPGSCADAARTVVDAF 117
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G LD++  NA           +  E +  +L VN+ G ++ ++ A  A +    +G +I 
Sbjct: 118 GALDVVCANAGIFPEARLDT-MTPEQLSEVLDVNVKGTVYTVQ-ACLAPLTASGRGRVIL 175
Query: 148 TSSSAAIMGGLA--SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY 205
           TSS    + G    SH Y  SK A +G  R+ A EL   G+ VN I P  + +E LV   
Sbjct: 176 TSSITGPVTGYPGWSH-YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV--- 231
Query: 206 RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                  DM  E +  M R   S+  G   S  D+   A FLA++EAG+IT   +V+DGG
Sbjct: 232 -------DMGEEYISGMAR---SIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 29/239 (12%)
Query: 37  FAENGAHIVIA---------DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK 87
            A+ GA++V+          +++DE+    +  I    +  DV   EDV + V+  V   
Sbjct: 24  LAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA---VRADVANAEDVTNMVKQTVDVF 80
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           GQ+DI+ NNA           +  E+   +++ NL G+    K  ++ M+  QR G I+ 
Sbjct: 81  GQVDILVNNAGVTKDNLLMR-MKEEEWDTVINTNLKGVFLCTKAVSRFMMR-QRHGRIVN 138
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S   + G      Y  +K  +IGL +++A EL    I VN I+P  + ++M       
Sbjct: 139 IASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM------- 191
Query: 208 YLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                D+  E +  +M++   +   G +   +D+A A  F AS+++ +IT   L +DGG
Sbjct: 192 ----TDVLDENIKAEMLKLIPAAQFGEA---QDIANAVTFFASDQSKYITGQTLNVDGG 243

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 63  GRYI---HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           GR I     DV     +++ V  A++  G +DI+ +N            +++ D ++  +
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEV---VSLTDQQWSDI 162
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           L  NL G  H  +    +MIE  + GS+I  SS+  + G      Y+ SK  + GL  S 
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNA--YRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           A E+G+H IRVN ++P  V +EM +N    + +L   +    E    +    +LL     
Sbjct: 223 ANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282
Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             EDV+ A  +LAS+EA +I    + +DGG
Sbjct: 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRYIH-----CDVTKEEDVESAVRLAVSWKGQ 89
           +  A++GAH+V++    +      +T+ G  +      C V K ED E  V  AV   G 
Sbjct: 33  RRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG 92
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +DI+ +NA           +  E     L +N+       K     M E +  GS++  S
Sbjct: 93  IDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEM-EKRGGGSVVIVS 151
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S AA         Y++SK A++GL ++ A EL    IRVNC++P      ++  ++ + L
Sbjct: 152 SIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPG-----LIKTSFSRML 206
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                K E + + +R     +R R    ED A    FL SE+A +IT   +V+ GG
Sbjct: 207 WMDKEKEESMKETLR-----IR-RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 256

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 109/236 (46%), Gaps = 24/236 (10%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGR---YIHCDVTKEEDVESAVRLAVSWKGQLDIM 93
           FA  GA I IAD++    A  A    GR    + CDV++  DVE+  +  +S  G+ DI+
Sbjct: 27  FAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL 86
Query: 94  FNNAXXXXXXXXXXXLNMEDVKFLLSVNLN-GILHGIKHAAKAMIEGQRK---GSIICTS 149
            NNA           L  E  K    +N++ G L      AKA + G ++   G II  +
Sbjct: 87  VNNAGIYPLIPFDE-LTFEQWKKTFEINVDSGFLM-----AKAFVPGMKRNGWGRIINLT 140
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S+   +   A   Y  +K A IG  R+ A +LGK GI VN I+P  V +     +    +
Sbjct: 141 STTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM 200
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              D+ P  +  + R    L         D+  AA FLAS++A FIT   L +DGG
Sbjct: 201 --FDVLPNMLQAIPRLQVPL---------DLTGAAAFLASDDASFITGQTLAVDGG 245

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 36  LFAENGAHIVIA-----DI------LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAV 84
           +FA  GA++ +A     DI      LD+LG+     IG   +  DV+     ++    AV
Sbjct: 29  VFARAGANVAVAGRSTADIDACVADLDQLGSG--KVIG---VQTDVSDRAQCDALAGRAV 83
Query: 85  SWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS 144
              G +D++  NA           +  E +  + +VN+NG  + ++    A+I     G 
Sbjct: 84  EEFGGIDVVCANAGVFPDAPLAT-MTPEQLNGIFAVNVNGTFYAVQACLDALIA-SGSGR 141
Query: 145 IICTSS-SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN 203
           ++ TSS +  I G      Y  +K A +G  R+ A EL  H I VN I P  + +E L+ 
Sbjct: 142 VVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE 201
Query: 204 AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVID 263
              +Y          +  M R   S+  G   + ED+   A FLA++EAG+IT   + +D
Sbjct: 202 NGEEY----------IASMAR---SIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVD 248
Query: 264 GG 265
           GG
Sbjct: 249 GG 250

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 18/236 (7%)
Query: 35  KLFAENGAHIVI-ADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLA--VSWKGQLD 91
           +L  +N  H VI  DI     A        ++I  D+TK++D+ + + +   VS+ G   
Sbjct: 22  ELLLQNKNHTVINIDIQQSFSAE-----NLKFIKADLTKQQDITNVLDIIKNVSFDG--- 73
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
            +F NA           +++E +K +L +N+   ++ IK     +  G    SI+   S 
Sbjct: 74  -IFLNAGILIKGSIFD-IDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSD 128
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              +    S AY+LSK AI    +S A +L K+ IRVN + P  V +++  N  +KY   
Sbjct: 129 QCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANN 188
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             +  +E  K  ++       R A  +++A+  +FL S+++ F T   + IDGGYT
Sbjct: 189 VGISFDEAQK--QEEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLN 123
           RY   D+T E++   AV    +W G+L  + + A           ++ E  +  + +N+N
Sbjct: 66  RYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVN 125
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G ++ +KHAA+ M+ G   GS +  SS AA        AY ++K A+  L +  A ELG 
Sbjct: 126 GTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGA 184
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             +RVN I P  + ++++          +D     +C  +         R   +EDVA  
Sbjct: 185 SWVRVNSIRPGLIRTDLVAAITESAELSSDYA---MCTPLP--------RQGEVEDVANM 233
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
           A+FL S+ A F+T   + +DGG
Sbjct: 234 AMFLLSDAASFVTGQVINVDGG 255

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 37  FAENGAHIVIADILDELGAALASTI---GGRYI--HCDVTKEEDVESAVRLAVSWKGQLD 91
             ++G  + IAD  D    A+AS I   GG  +    DV+  + V +AV  A    G  D
Sbjct: 22  LVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           ++ NNA           +  E V  + ++N+ G++ GI+ A +A  +    G II   S 
Sbjct: 82  VIVNNAGVAPSTPIES-ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ 140
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
           A  +G      YS SK A+ GL ++ A +L   GI VN   P  V + M     R+ + +
Sbjct: 141 AGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ-VSE 199
Query: 212 ADMKP-----EEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A  KP      E  K +        GR +  EDVA    +LAS ++ ++T  +L+IDGG
Sbjct: 200 AAGKPLGYGTAEFAKRI------TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 58  ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF- 116
           A T GG     DV+KE DVE+ ++ A+   G +D++ NNA           + M+  ++ 
Sbjct: 53  AITFGG-----DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL---IRMKKSQWD 104
Query: 117 -LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
            ++ +NL G+    + A K M++ +RKG II  +S   ++G +    Y+ +K  +IG ++
Sbjct: 105 EVIDLNLTGVFLCTQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSK 163
Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           + A E     I VN + P  + S+M        LG+ DM+ + +       G++  GR+ 
Sbjct: 164 TAAREGASRNINVNVVCPGFIASDMTAK-----LGE-DMEKKIL-------GTIPLGRTG 210
Query: 236 SIEDVAQAALFLA-SEEAGFITAHNLVIDGG 265
             E+VA    FLA S  A +IT     IDGG
Sbjct: 211 QPENVAGLVEFLALSPAASYITGQAFTIDGG 241

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
             DV++E +VE+     +   G+LD++ NNA           +  +D + +L +NL G+ 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLR-MKRDDWQSVLDLNLGGVF 142
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              + AAK M++ QR G II  +S    MG      YS +K  +IGL ++ A EL   GI
Sbjct: 143 LCSRAAAKIMLK-QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            VN ++P  + ++M           +++  E++ +++        GR     +VA    F
Sbjct: 202 TVNAVAPGFIATDM----------TSELAAEKLLEVIP------LGRYGEAAEVAGVVRF 245
Query: 247 LASEE-AGFITAHNLVIDGG 265
           LA++  A +IT   + IDGG
Sbjct: 246 LAADPAAAYITGQVINIDGG 265

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRYIH--CDVTKEEDVESAVRLAVSWKGQLDI 92
           ++ A  GA +V+AD+ +   A  A+++G   +H   D+T E  V + +   +   G+LDI
Sbjct: 29  RVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88
Query: 93  MFNNAXXXXXXXXXXXLNMEDV-KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           + NNA               DV     +VN  G +   K+A   +I     G+I+  SS+
Sbjct: 89  VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSA 147
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
            A      S AY+ +K AI  L R  A + G+HG+R N I+P       LV   R  +G 
Sbjct: 148 TAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPG------LVRTPRLEVG- 200
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
               P+ +  +   +   L GR     ++A+   FLAS+ A FIT   +  D G
Sbjct: 201 ---LPQPIVDIF--ATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLN 123
           I  +V   ++V++ ++  VS  G LD++ NNA           + M++ ++  ++  NL 
Sbjct: 65  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL---MRMKEQEWDDVIDTNLK 121
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G+ + I+ A   M+  QR G+II  SS    +G      Y  +K  +IGL +S A EL  
Sbjct: 122 GVFNCIQKATPQMLR-QRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 180
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN ++P  + S+M  +A    L +  +    + +  +D+            D+A  
Sbjct: 181 RGITVNAVAPGFIVSDM-TDALSDELKEQMLTQIPLARFGQDT------------DIANT 227
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             FLAS++A +IT   + ++GG
Sbjct: 228 VAFLASDKAKYITGQTIHVNGG 249

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 17/157 (10%)
Query: 109 LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE 168
           L +E  + +L VNL G     + A + + EG   GS++ T S A  +G      Y+  K 
Sbjct: 99  LPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSVAG-LGAFGLAHYAAGKL 154
Query: 169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
            ++GLAR+ A EL + G+RVN + P  + + M           A + P       ++ G+
Sbjct: 155 GVVGLARTLALELARKGVRVNVLLPGLIQTPM----------TAGLPP---WAWEQEVGA 201
Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              GR+   E+VAQAALFL SEE+ +IT   L +DGG
Sbjct: 202 SPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 238

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 23/236 (9%)
Query: 37  FAENGAHIVIADILDELGAALASTI---GGRYIHC--DVTKEEDVESAVRLAVSWKGQLD 91
            A  GA +V+ADI  E   A+A  I   GG  I    DV+  E  ++     ++  G +D
Sbjct: 29  LAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88
Query: 92  IMFNNAXXXXXXXXXXXLNM--EDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
            + NNA           L +  E  K  +SVNL+G L   +   K M + +  G+I+  S
Sbjct: 89  YLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK-RGGGAIVNQS 147
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S+AA    L S+ Y L+K  I GL +  + ELG   IR+N I+P  + +E    A R   
Sbjct: 148 STAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTE----ANRTTT 200
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            K     E V  +V+    L   R  + +D+    LFL S+EA +IT     +DGG
Sbjct: 201 PK-----EMVDDIVK---GLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG 248

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 18/259 (6%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIA----DILDELGAALASTIGGRY-I 66
           ++RL  K                K F   GA + I     D+LD   AA+A   GG   I
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD---AAIAEIGGGAVGI 80
Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
             D     +++       +  G++D++F NA           +  E        N+ G+L
Sbjct: 81  QADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGE-VTEEQYDDTFDRNVKGVL 139
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             ++ A   +  G    S++ T S+A   G  A   Y+ SK A+   AR+   +L   GI
Sbjct: 140 FTVQKALPLLARGS---SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGI 196
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           R+N +SP    +  LV    +  GK  ++ + +   +  +  +  GR    E+VA AALF
Sbjct: 197 RINTLSPGPTETTGLV----ELAGKDPVQQQGLLNAL--AAQVPXGRVGRAEEVAAAALF 250
Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS+++ F+T   L +DGG
Sbjct: 251 LASDDSSFVTGAELFVDGG 269

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 21/235 (8%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGRY------IHCDVTKEEDVESAVRLAVSWKGQL 90
            A  G+ ++I     E   A+A  I  +Y      +  ++  EE +  A     +    +
Sbjct: 27  LASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI 86
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           DI+ NNA           +++ D + +L VNL G     +++ + MI+ QR G I+  SS
Sbjct: 87  DILVNNAGITRDKLFLR-MSLLDWEEVLKVNLTGTFLVTQNSLRKMIK-QRWGRIVNISS 144
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
                G +    YS +K  +IG  +S A EL    + VN ++P  + ++M          
Sbjct: 145 VVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM---------- 194
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +  EE+ +  ++   L  GR  S E+VA   LFL SE A +IT   + ++GG
Sbjct: 195 -TAVLSEEIKQKYKEQIPL--GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 109 LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE 168
           ++ +D   +++VNL G     + AA+A++    +GSII  SS    +G +    Y+ SK 
Sbjct: 111 MSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKA 170
Query: 169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVCKMVRDSG 227
            +IGL ++ A ELG+HGIR N + P  + + M     +K + K  +M P           
Sbjct: 171 GVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIP----------- 219
Query: 228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
               G     EDVA    FLASE++G+IT  ++ + GG
Sbjct: 220 ---MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+ +  +VT  E +E+ ++      G +D
Sbjct: 30  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           +  E+   ++  NL  I    K   + M++ +R+G II   S 
Sbjct: 89  ILVNNAGITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMK-KRQGRIINVGSV 146
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              MG      Y+ +K  +IG  +S A E+   G+ VN ++P  + ++M          K
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMT---------K 197
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 198 ALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 247

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           ++  DVT + + +SA+  A    G  D++ NNA           +  ED+K + SVN+  
Sbjct: 57  FVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLE-VTEEDLKQIYSVNVFS 115
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +  GI+ A++   E   KG II  +S AAI G     AYS +K A+ GL ++ A EL   
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD-SGSLLRGRSASIEDVAQA 243
           G  VN  +P G+    +       L K + KP  + +  ++ S S+  GR +  EDVA  
Sbjct: 176 GHTVNAYAP-GIVGTGMWEQIDAELSKINGKP--IGENFKEYSSSIALGRPSVPEDVAGL 232
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             FLASE + ++T   +++DGG
Sbjct: 233 VSFLASENSNYVTGQVMLVDGG 254

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+ +  +VT  E +E+ ++      G +D
Sbjct: 30  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           +  E+   ++  NL  I    K   + M++ +R+G II   S 
Sbjct: 89  ILVNNAAITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMK-KRQGRIINVGSV 146
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              MG      Y+ +K  +IG  +S A E+   G+ VN ++P  + ++M          K
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT---------K 197
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 198 ALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 247

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+ +  +VT  E +E+ ++      G +D
Sbjct: 30  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           +  E+   ++  NL  I    K   + M++ +R+G II   S 
Sbjct: 89  ILVNNAGITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMK-KRQGRIINVGSV 146
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              MG      Y+ +K  +IG  +S A E+   G+ VN ++P  + ++M          K
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT---------K 197
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 198 ALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 247

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+ +  +VT  E +E+ ++      G +D
Sbjct: 30  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           +  E+   ++  NL  I    K   + M++ +R+G II   S 
Sbjct: 89  ILVNNADITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMK-KRQGRIINVGSV 146
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              MG      Y+ +K  +IG  +S A E+   G+ VN ++P  + ++M          K
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT---------K 197
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 198 ALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 247

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           + RL GK                KL    GA +  +DI +  G  LA+ +G R  ++  D
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHD 60
Query: 70  VTKEEDVESAVRLAVSWK-GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           V+ E D  + V  AV  + G L+++ NNA             +ED   LL +N   +  G
Sbjct: 61  VSSEAD-WTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG-RLEDFSRLLKINTESVFIG 118
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG--I 186
            +    AM E    GSII  +S ++ +       YS SK A+  L R+ A    K G  I
Sbjct: 119 CQQGIAAMKE--TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAAL 245
           RVN I P G+ + M+  +  K + K         +MV     L R GR+   E +AQ  L
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSK---------EMVLHDPKLNRAGRAYMPERIAQLVL 227
Query: 246 FLASEEAGFITAHNLVID 263
           FLAS+E+  ++   L  D
Sbjct: 228 FLASDESSVMSGSELHAD 245

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 39  ENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAX 98
           E+ A+ V+ +I    G A+A       +  DVT E DV + V+ A+   G+LD+M NNA 
Sbjct: 42  EDEANSVLEEIKKVGGEAIA-------VKGDVTVESDVINLVQSAIKEFGKLDVMINNA- 93
Query: 99  XXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-SAAIMGG 157
                     +++ D   ++  NL G   G + A K  +E   KG++I  SS    I   
Sbjct: 94  GLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP 153
Query: 158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE 217
           L  H Y+ SK  +  + ++ A E    GIRVN I P  + + +    +     +AD+  E
Sbjct: 154 LFVH-YAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADV--E 210
Query: 218 EVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            +  M         G     E++A  A +LAS EA ++T   L  DGG T
Sbjct: 211 SMIPM---------GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRYIH-----CDVTKEEDVESAVRLAVSWKGQ 89
           +  A++GAH+V++    E      +T+ G  +      C V K ED E  V +AV+  G 
Sbjct: 32  RRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +DI+ +NA              E    +L VN+   +   K     M E +  GS++  S
Sbjct: 92  VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEM-EKRGGGSVLIVS 150
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S  A         Y++SK A++GL ++ A EL    IRVNC++P  + +      +    
Sbjct: 151 SVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA 210
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            K  MK            SL   R  + ED A    FL SE+A +IT   +V+ GG
Sbjct: 211 RKEYMKE-----------SLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG 255

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGRY------IHCDVTKEEDVESAVRLAVSWKGQL 90
            AE G  +V+A    E  +  A  +  +Y        CDV+  E+V+  +       G+L
Sbjct: 41  LAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKL 100
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           D + N A             +++ + ++ VNL G  +  + A   + E      I   S 
Sbjct: 101 DTVVN-AAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL 159
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
           +   +      AY+ SK  +  L ++ A E G++GIRVN I+P           YR  + 
Sbjct: 160 TVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP---------GWYRTKMT 210
Query: 211 KADMK-PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           +A    PE++  M++    +  GR+   ED+   A+FLASEEA ++T   + +DGG+T
Sbjct: 211 EAVFSDPEKLDYMLK---RIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 39  ENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAX 98
           E+ A+ V+ +I    G A+A       +  DVT E DV + V+ A+   G+LD+M NNA 
Sbjct: 42  EDEANSVLEEIKKVGGEAIA-------VKGDVTVESDVINLVQSAIKEFGKLDVMINNA- 93
Query: 99  XXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-SAAIMGG 157
                     +++ D   ++  NL G   G + A K  +E   KG++I  SS    I   
Sbjct: 94  GLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP 153
Query: 158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE 217
           L  H Y+ SK  +  +  + A E    GIRVN I P  + + +    +     +AD+  E
Sbjct: 154 LFVH-YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADV--E 210
Query: 218 EVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            +  M         G     E++A  A +LAS EA ++T   L  DGG T
Sbjct: 211 SMIPM---------GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 39  ENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAX 98
           E+ A+ V+ +I    G A+A       +  DVT E DV + V+ A+   G+LD+M NNA 
Sbjct: 42  EDEANSVLEEIKKVGGEAIA-------VKGDVTVESDVINLVQSAIKEFGKLDVMINNA- 93
Query: 99  XXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-SAAIMGG 157
                     +++ D   ++  NL G   G + A K  +E   KG++I  SS    I   
Sbjct: 94  GLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP 153
Query: 158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE 217
           L  H Y+ SK  +  +  + A E    GIRVN I P  + + +    +     +AD+  E
Sbjct: 154 LFVH-YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADV--E 210
Query: 218 EVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            +  M         G     E++A  A +LAS EA ++T   L  DGG T
Sbjct: 211 SMIPM---------GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 61  IGGRYIHC--DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLL 118
           +GG  I    DVT E DV + V+ A+   G+LD+M NNA           +++ D   ++
Sbjct: 55  VGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA-GLENPVSSHEMSLSDWNKVI 113
Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-SAAIMGGLASHAYSLSKEAIIGLARST 177
             NL G   G + A K  +E   KG++I  SS    I   L  H Y+ SK  +  +  + 
Sbjct: 114 DTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETL 172
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A E    GIRVN I P  + + +    +     +AD+  E +  M         G     
Sbjct: 173 ALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADV--ESMIPM---------GYIGEP 221
Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           E++A  A +LAS EA ++T   L  DGG T
Sbjct: 222 EEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+ +  +VT  E +E+ ++      G +D
Sbjct: 30  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           +  E+   ++  NL  I    K   + M++ +R+G II   S 
Sbjct: 89  ILVNNAGITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMK-KRQGRIINVGSV 146
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
              MG      ++ +K  +IG  +S A E+   G+ VN ++P  + ++M          K
Sbjct: 147 VGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT---------K 197
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           A    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 198 ALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 247

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQLDI 92
           +  A+ G H++ ADI  +   A A+ IG     C  DV+ E+ + + V   V+  G +D 
Sbjct: 47  RRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106
Query: 93  MFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA 152
           +  NA             +ED   ++++NL G     KHAA  MIE +  G+I+  SS A
Sbjct: 107 LVANAGVVHLASLIDT-TVEDFDRVIAINLRGAWLCTKHAAPRMIE-RGGGAIVNLSSLA 164
Query: 153 AIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA 212
             +    + AY +SK  II L+R TA EL   GIR N + P  V + M   A   + G  
Sbjct: 165 GQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGAL 224
Query: 213 DMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                      R   + L+GR A+ E++A   +FL S++A  IT    + DGG
Sbjct: 225 GAGG------ARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           +I CDVT  + V++++       G + ++ NNA           ++M + + ++ VNL G
Sbjct: 57  HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES-MSMGEWRRIIDVNLFG 115
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
             +  K A   MI  +    +  +S  A+I+   AS AY  SK A+IGL +S A +    
Sbjct: 116 YYYASKFAIPYMIRSRDPSIVNISSVQASIITKNAS-AYVTSKHAVIGLTKSIALDYAPL 174
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            +R N + P  + + ++  A    +G   M+ E+  K+          R    ++VA A 
Sbjct: 175 -LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEK--KISEWGHEHPMQRIGKPQEVASAV 231
Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FLAS EA FIT   L +DGG
Sbjct: 232 AFLASREASFITGTCLYVDGG 252

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           +I CDVT  + V++++       G + ++ NNA           ++M + + ++ VNL G
Sbjct: 50  HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES-MSMGEWRRIIDVNLFG 108
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
             +  K A   MI  +    +  +S  A+I+   AS AY  SK A+IGL +S A +    
Sbjct: 109 YYYASKFAIPYMIRSRDPSIVNISSVQASIITKNAS-AYVTSKHAVIGLTKSIALDYAPL 167
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            +R N + P  + + ++  A    +G   M+ E+  K+          R    ++VA A 
Sbjct: 168 -LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEK--KISEWGHEHPMQRIGKPQEVASAV 224
Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FLAS EA FIT   L +DGG
Sbjct: 225 AFLASREASFITGTCLYVDGG 245

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNME--DVKFLLSVNLN 123
           I  +V   ++V++ ++  VS  G LD++ NNA              E  DV   +  NL 
Sbjct: 59  IQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDV---IDTNLK 115
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G+ + I+ A    +  QR G+II  SS    +G      Y  +K  +IGL +S A EL  
Sbjct: 116 GVFNCIQKATPQXLR-QRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN ++P  + S+   +A    L +  +    + +  +D+            D+A  
Sbjct: 175 RGITVNAVAPGFIVSDX-TDALSDELKEQXLTQIPLARFGQDT------------DIANT 221
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             FLAS++A +IT   + ++GG
Sbjct: 222 VAFLASDKAKYITGQTIHVNGG 243

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 38  AENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
           +ENGA      I D LGA       G+ +  +VT    +ES +    +  G++DI+ NNA
Sbjct: 38  SENGAQA----ISDYLGA------NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 98  XXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM 155
                      + M+D ++  ++  NL+ +    K   +AM++ +R G II   S    M
Sbjct: 88  GITRDNLL---MRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK-KRHGRIITIGSVVGTM 143
Query: 156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK 215
           G      Y+ +K  +IG ++S A E+   GI VN ++P  + ++M      + L  +D +
Sbjct: 144 GNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT-----RAL--SDDQ 196
Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +   V        GR    +++A A  FLAS+EA +IT   L ++GG
Sbjct: 197 RAGILAQVP------AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 240

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 42  AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXX 101
           A  V+A+ L +LGA       G  I  D++K  +V +    AVS  G LD + +N+    
Sbjct: 59  AEEVVAE-LKKLGAQ------GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV 111
Query: 102 XXXXXXXLNMEDVKFLLSVNLNGIL----HGIKHAAKAMIEGQRKGSIICTSSSAAIMGG 157
                  +  E    + ++N  G       G+KH        +R G II TSS AA+M G
Sbjct: 112 WCDELE-VTQELFDKVFNLNTRGQFFVAQQGLKHC-------RRGGRIILTSSIAAVMTG 163
Query: 158 LASHA-YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL--GKADM 214
           + +HA Y+ SK A+ G  R+ A + G  G+ VNCI+P GV ++M       Y   G   M
Sbjct: 164 IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM 223
Query: 215 KPEEVCKMVRDSGSLLR-GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             E++ + + +   L R G  A   D+ +A   L  EE+ +I    + + GG
Sbjct: 224 PQEKIDEGLANMNPLKRIGYPA---DIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 40  NGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
            GA  V+ D+ +  G A A  +G    +   DVT E+DV++A+ LA    G++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 98  XXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRKGSIIC 147
                             +ED + +L VNL G  + I+  A  M      +G ++G II 
Sbjct: 93  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 152
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
           T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P    + +L +    
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--- 209
Query: 208 YLGKADMKPEEVCKMV 223
                   PE+VC  +
Sbjct: 210 --------PEKVCNFL 217

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 41  GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXX 100
           G H    + L EL A L   I       +++  E V++  + A    G +DI+ NNA   
Sbjct: 35  GLHGTREEKLKELAAELGERI--FVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT 92
Query: 101 XXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS 160
                   ++ ED   +L+VNL  + +  +     M+  +R G II  +S   + G    
Sbjct: 93  RDGLFVR-MSDEDWDAVLTVNLTSVFNLTRELTHPMMR-RRNGRIINITSIVGVTGNPGQ 150
Query: 161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC 220
             Y  SK  +IG ++S A E+    + VNCI+P  + S M         GK + K ++  
Sbjct: 151 ANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAM--------TGKLNEKQKDAI 202
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                 G++   R     D+A A ++LAS+EA ++T   L ++GG
Sbjct: 203 M-----GNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGG 242

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXX--XLNMEDVKFLLSVNLN 123
           +  DV  E DV +A+   +   G +D++ NNA               +E    +++VN+ 
Sbjct: 57  VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVR 116
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           GI  G +     M+  Q  G I+  +S A+++      AY+ SK A++ L +S A +   
Sbjct: 117 GIFLGCRAVLPHMLL-QGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAG 175
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIR N + P  + + M    +R  L + +++ + + ++ +       G +A + D   A
Sbjct: 176 SGIRCNAVCPGMIETPM--TQWR--LDQPELRDQVLARIPQKE----IGTAAQVAD---A 224
Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
            +FLA E+A ++    LV+DG YT
Sbjct: 225 VMFLAGEDATYVNGAALVMDGAYT 248

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 41  GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXX 100
           G H    + L EL A L   I       +++  E V++  + A    G +DI+ NNA   
Sbjct: 38  GLHGTREEKLKELAAELGERI--FVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT 95
Query: 101 XXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS 160
                   ++ ED   +L+VNL  + +  +     M+  +R G II  +S   + G    
Sbjct: 96  RDGLFVR-MSDEDWDAVLTVNLTSVFNLTRELTHPMMR-RRNGRIINITSIVGVTGNPGQ 153
Query: 161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC 220
             Y  SK  +IG ++S A E+    + VNCI+P  + S M         GK + K ++  
Sbjct: 154 ANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAM--------TGKLNEKQKDAI 205
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                 G++   R     D+A A ++LAS+EA ++T   L ++GG
Sbjct: 206 M-----GNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGG 245

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 40  NGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
            GA  V+ D+ +  G A A  +G    +   DVT E+DV++A+ LA    G++D+  N A
Sbjct: 35  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94
Query: 98  XXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRKGSIIC 147
                             +ED + +L VNL G  + I+  A  M      +G ++G II 
Sbjct: 95  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 154
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
           T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P    + +L +    
Sbjct: 155 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--- 211
Query: 208 YLGKADMKPEEVCKMV 223
                   PE+VC  +
Sbjct: 212 --------PEKVCNFL 219

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 38  AENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
           +ENGA      I D LGA       G+ +  +VT    +ES +    +  G++DI+ NNA
Sbjct: 38  SENGAQA----ISDYLGA------NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 98  XXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM 155
                      + M+D ++  ++  NL+ +    K   +AM++ +R G II   S    M
Sbjct: 88  GITRDNLL---MRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK-KRHGRIITIGSVVGTM 143
Query: 156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK 215
           G      ++ +K  +IG ++S A E+   GI VN ++P  + ++M      + L  +D +
Sbjct: 144 GNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT-----RAL--SDDQ 196
Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +   V        GR    +++A A  FLAS+EA +IT   L ++GG
Sbjct: 197 RAGILAQVP------AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 240

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 63  GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSV 120
           GR    +V     V++ V   +   G L+++ NNA           + M+D ++  ++  
Sbjct: 79  GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA---MRMKDDEWDAVIDT 135
Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           NL  +    +   + M++  R G I+  +S     G      Y+ +K  + G+ R+ A E
Sbjct: 136 NLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALARE 194
Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           +G  GI VNC++P  + ++M      K L      P+E    ++    L  GR  S ED+
Sbjct: 195 IGSRGITVNCVAPGFIDTDMT-----KGL------PQEQQTALKTQIPL--GRLGSPEDI 241
Query: 241 AQAALFLASEEAGFITAHNLVIDGG 265
           A A  FLAS +AG+IT   L ++GG
Sbjct: 242 AHAVAFLASPQAGYITGTTLHVNGG 266

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 68  CDVTKEEDVESAVRLAVS-WKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
           CD +   + E  ++   S + G+LDI+ NN               ED  F +S NL    
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINN-LGAIRSKPTLDYTAEDFSFHISTNLESAY 128
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H +   A  +++    G+II  SS A ++       YS +K A+  LAR+ ACE    GI
Sbjct: 129 H-LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           R N ++P  + + +    Y           +E  K+V     L  GR    E+V+    F
Sbjct: 188 RANAVAPAVIATPLAEAVYD----------DEFKKVVISRKPL--GRFGEPEEVSSLVAF 235
Query: 247 LASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           L    A +IT   + +DGG T       F YQ
Sbjct: 236 LCMPAASYITGQTICVDGGLTVN----GFSYQ 263

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 20/243 (8%)
Query: 37  FAENGAHIVI-----ADILDELGAALASTIGGRYIH--CDVTKEEDVESAVRLAVSWKGQ 89
            A  GA IV+     A  ++++ A LA+  G + ++   D++K E V   V  AV   G+
Sbjct: 24  LAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +DI+ NNA              E    +L++NL+ + HG   AA   ++ Q  G II  +
Sbjct: 84  IDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHGTA-AALPHMKKQGFGRIINIA 141
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S+  ++      AY  +K  ++G  + TA E    GI  N I P  V S ++        
Sbjct: 142 SAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQISALA 201
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASI-----EDVAQAALFLASEEAGFITAHNLVIDG 264
            K  +  E   +       LL  +  S+     E +   A+FLAS+ A  IT   + +DG
Sbjct: 202 EKNGVDQETAAR------ELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255
Query: 265 GYT 267
           G+T
Sbjct: 256 GWT 258

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 67  HCDVTKEE-DVESAVRLAVSWKG--QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLN 123
           H  + +EE D+  + RL   ++   +LD++ NNA              E V   L +NL+
Sbjct: 53  HPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERV---LRLNLS 109
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
             +   + A   +   QR GSI+  +S  +  G     AYS SK AI+ L RS ACE   
Sbjct: 110 AAMLASQLARPLL--AQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAA 167
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             IRVN I+P  + + +          KAD+   E  + +     L R   A   +VA A
Sbjct: 168 ERIRVNAIAPGWIDTPLGAGL------KADV---EATRRIMQRTPLARWGEAP--EVASA 216
Query: 244 ALFLASEEAGFITAHNLVIDGGY 266
           A FL    A F+T   L +DGGY
Sbjct: 217 AAFLCGPGASFVTGAVLAVDGGY 239

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 40  NGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
            GA  V+ D+ +  G A A  +G    +   DVT E+DV++A+ LA    G++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 98  XXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRKGSIIC 147
                             +ED + +L VNL G  + I+  A  M      +G ++G II 
Sbjct: 93  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 152
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP--HGVP 197
           T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P   G P
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 204

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           Y+  ++  +     AV   ++  G+LD + NNA           L+     F+ S+  N 
Sbjct: 59  YLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG----LDAGRDAFVASLERNL 114
Query: 125 I-LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           I  + + H     ++  R G+I+  SS  A+ G   +  Y  SK A + L R  A  L +
Sbjct: 115 IHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALRE 173
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED-VAQ 242
           HG+RVN +    +P+E++   YR ++   +  PE   K+   +  +  GR  +  D +A 
Sbjct: 174 HGVRVNAV----IPAEVMTPLYRNWIATFE-DPE--AKLAEIAAKVPLGRRFTTPDEIAD 226
Query: 243 AALFLASEEAGFITAHNLVIDGGYT 267
            A+FL S  A   T   L +DGGYT
Sbjct: 227 TAVFLLSPRASHTTGEWLFVDGGYT 251

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 27/242 (11%)
Query: 37  FAENGAHIVIADILDELGAALAST---IGGRYIHC---DVTKEEDVESAVRLAVSWKGQL 90
            AE GA ++IAD LDE  A  A     + G  +     DVT  E V++AVR     +G++
Sbjct: 33  LAEAGARVIIAD-LDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGILHGIKHAAKAMIEGQRKGSIICT 148
           DI+   A            +M D ++L  + +NLNG+    +   + M+E Q++G I+  
Sbjct: 92  DILV--ACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE-QKQGVIVAI 148
Query: 149 SSSAAIMGGLASH--AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR 206
            S + ++        AY+ SK  +    RS A E   HGIR N ++P  + +        
Sbjct: 149 GSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETT------- 201
Query: 207 KYLGKADM-KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             L +  M KPE     +  +G+ + GR    ++VA    FLAS+ A  +T   + +D G
Sbjct: 202 --LTRFGMEKPELYDAWI--AGTPM-GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG 256
Query: 266 YT 267
           +T
Sbjct: 257 FT 258

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 20/243 (8%)
Query: 37  FAENGAHIVI-----ADILDELGAALASTIGGRYIH--CDVTKEEDVESAVRLAVSWKGQ 89
            A  GA IV+     A  ++++ A LA+  G + ++   D++K E V   V  AV   G+
Sbjct: 24  LAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +DI+ NNA              E    +L++NL+ + HG   AA   ++ Q  G II  +
Sbjct: 84  IDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHGTA-AALPHMKKQGFGRIINIA 141
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S+  ++      AY  +K  ++G  + TA E    GI  N I P  V + ++        
Sbjct: 142 SAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALA 201
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASI-----EDVAQAALFLASEEAGFITAHNLVIDG 264
            K  +  E   +       LL  +  S+     E +   A+FLAS+ A  IT   + +DG
Sbjct: 202 EKNGVDQETAAR------ELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255
Query: 265 GYT 267
           G+T
Sbjct: 256 GWT 258

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 30/239 (12%)
Query: 37  FAENGAHIVIADI--------LDELGAALASTIGGRYI--HCDVTKEEDVESAVRLAVSW 86
           FA  GA +V++DI        +DE+       +GG+     CD+T E+++ +    A+S 
Sbjct: 31  FATAGASVVVSDINADAANHVVDEI-----QQLGGQAFACRCDITSEQELSALADFAISK 85
Query: 87  KGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSII 146
            G++DI+ NNA           + M D +    +N+    H  +  A  M E    G I+
Sbjct: 86  LGKVDILVNNAGGGGPKPFD--MPMADFRRAYELNVFSFFHLSQLVAPEM-EKNGGGVIL 142
Query: 147 CTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR 206
             +S AA    +   +Y+ SK A   L R+ A +LG+  IRVN I+P  + ++ L     
Sbjct: 143 TITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDAL----- 197
Query: 207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
               K+ + PE   KM++ +   +R R    +D+A AALFL S  A +++   L + GG
Sbjct: 198 ----KSVITPEIEQKMLQHTP--IR-RLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 105/262 (40%), Gaps = 19/262 (7%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGG----RYIH 67
           S RL GK                  F E GA ++I D   ++G   A ++G     ++  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
            D + E+             G +  + NNA              E  K LL+VNL+G+  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRK-LLAVNLDGVFF 119
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA--CELGKHG 185
           G +   + M       SII  SS    +G  +  AY+ SK A+  +++S A  C L  + 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN + P  + + ++           D+   E     R    +  G      D+A   +
Sbjct: 180 VRVNTVHPGYIKTPLV----------DDLPGAEEAMSQRTKTPM--GHIGEPNDIAYICV 227
Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS E+ F T    V+DGGYT
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           D++K E  +  VR  +   G++D + NNA              ED    L VN+ G  H 
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVE-XTQEDYDHNLGVNVAGFFHI 134
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGI 186
            + AA   ++ Q  G I+  ++S       G  S   SL+K  +  + RS A E  + G+
Sbjct: 135 TQRAAAEXLK-QGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGV 193
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN +SP  +              K    P E    +  +G    GR   I DV  A L+
Sbjct: 194 RVNAVSPGVI--------------KTPXHPAETHSTL--AGLHPVGRXGEIRDVVDAVLY 237
Query: 247 LASEEAGFITAHNLVIDGGYTTG 269
           L  E AGFIT   L +DGG   G
Sbjct: 238 L--EHAGFITGEILHVDGGQNAG 258

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 20/243 (8%)
Query: 37  FAENGAHIVI-----ADILDELGAALASTIGGRYIH--CDVTKEEDVESAVRLAVSWKGQ 89
            A  GA IV+     A  ++++ A LA+  G + ++   D++K E V   V  AV   G+
Sbjct: 24  LAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           +DI+ NNA              E    +L++NL+ + HG   AA   ++ Q  G II  +
Sbjct: 84  IDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHGTA-AALPHMKKQGFGRIINIA 141
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S+  ++      AY  +K  ++G  + TA E    GI  N I P  V + ++        
Sbjct: 142 SAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQISALA 201
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASI-----EDVAQAALFLASEEAGFITAHNLVIDG 264
            K  +  E   +       LL  +  S+     E +   A+FLAS+ A  IT   + +DG
Sbjct: 202 EKNGVDQETAAR------ELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255
Query: 265 GYT 267
           G+T
Sbjct: 256 GWT 258

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 25/269 (9%)
Query: 5   DDTNKLSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAA--LASTIG 62
           +D N   S++L GK                  FA+ GA+I IA  LDE G A      + 
Sbjct: 35  EDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIA-YLDEEGDANETKQYVE 93
Query: 63  GRYIHC-----DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL 117
              + C     D++ E+  +  V+  V   G L+I+ NN            +  E ++  
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
             +N+    H  K A   + +G     II T+S  A  G      YS +K AI+   RS 
Sbjct: 154 FRINIFSYFHVTKAALSHLKQGD---VIINTASIVAYEGNETLIDYSATKGAIVAFTRSL 210
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-LLRGRSAS 236
           +  L + GIRVN ++P  + + ++ +++ +             K V   GS +   R   
Sbjct: 211 SQSLVQKGIRVNGVAPGPIWTPLIPSSFDE-------------KKVSQFGSNVPXQRPGQ 257
Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGG 265
             ++A A ++LAS ++ ++T   + ++GG
Sbjct: 258 PYELAPAYVYLASSDSSYVTGQXIHVNGG 286

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 110/248 (44%), Gaps = 29/248 (11%)
Query: 36  LFAENGAHIVI----ADILDE----LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK 87
           LFA  GA + I    A+ L+E    + AA  S      +  DVT +   +  +   +   
Sbjct: 25  LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 88  GQLDIMFNNAXXX---XXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS 144
           G+LDI+ NNA               ++E     L++NL  ++   K A   +     KG 
Sbjct: 85  GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL--SSTKGE 142
Query: 145 IICTSSSAAIMGGLASHAY-SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN 203
           I+  SS A+ +       Y S++K AI    R+TA +L +HGIRVN ISP  V +     
Sbjct: 143 IVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG---- 198
Query: 204 AYRKYLGKADMKPEEVCKMVRDSGSLLR-----GRSASIEDVAQAALFLASEE-AGFITA 257
                 G A   PEE  K    + + ++     G     +D+A+   FLA  + + +I  
Sbjct: 199 -----FGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIG 253
Query: 258 HNLVIDGG 265
           H LV+DGG
Sbjct: 254 HQLVVDGG 261

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G+LD++  NA           L  E    ++ VNL G    ++    AMIE    GSI+ 
Sbjct: 104 GRLDVVVANAGVLSWGRVWE-LTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVV 162
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            SSSA +     +  YS SK  +  L  + A ELG++GIRVN I P+ V + M+      
Sbjct: 163 VSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI------ 216
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSA---------SIEDVAQAALFLASEEAGFITAH 258
                  +PE + ++     S +              + ++VA    +LA + +G +T  
Sbjct: 217 -------EPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGT 269
Query: 259 NLVIDGG 265
            + +D G
Sbjct: 270 QIPVDKG 276

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 109 LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE 168
           L+ ED +   +VN+ G  +  +         QR G+I+  +S AA    +   AY  SK 
Sbjct: 93  LSKEDWQQTFAVNVGGAFNLFQQTMN-QFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151
Query: 169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
           A+  LA S   EL   G+R N +SP    ++M     ++ L  +D   E+    +R  G 
Sbjct: 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDM-----QRTLWVSDDAEEQ---RIRGFGE 203
Query: 229 LLR-----GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG 269
             +     G+ A  +++A   LFLAS+ A  IT  ++V+DGG T G
Sbjct: 204 QFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGSTLG 249

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 37  FAENGAHIV-------IADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLA--VSWK 87
           +A  GAH++       + ++ DE+        GG      V    D+E A  +A  ++  
Sbjct: 51  YARAGAHVLAWGRTDGVKEVADEI------ADGGGSAEAVVADLADLEGAANVAEELAAT 104
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
            ++D++ NNA           +++   + +L+VNL+      +    AM+     G I+ 
Sbjct: 105 RRVDVLVNNAGIIARAPAEE-VSLGRWREVLTVNLDAAWVLSRSFGTAMLA-HGSGRIVT 162
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S  +  GG    AY+ SK A++GL R+ A E    G+ VN ++P       +V A   
Sbjct: 163 IASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG-----YVVTANTA 217
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            L   D +  E+   +        GR A+ ED+   A+FLAS+ A ++    L +DGG+
Sbjct: 218 ALRADDERAAEITARIP------AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGW 270

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
            CDV+  + V   ++   +  G +  +  NA           L  ED  F+  VN+ G+ 
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVF 128
Query: 127 HGIKHAAKAMIEGQRKGSIICTSS-------SAAIMGGLASHAYSLSKEAIIGLARSTAC 179
           +  +  AK  ++ Q+KGSI+ TSS        +++ G L    Y+ SK A   L +  A 
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188
Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD--SGSLLRGRSASI 237
           E    GIRVN +SP  V ++   +  +K               +RD  + ++   R A  
Sbjct: 189 EWASAGIRVNALSPGYVNTDQTAHMDKK---------------IRDHQASNIPLNRFAQP 233
Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           E++   A+ L S+ A ++T     IDGG
Sbjct: 234 EEMTGQAILLLSDHATYMTGGEYFIDGG 261

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 17/257 (6%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG--GRYIHCD 69
           ++RL GK                   A +GA ++++DI  E   A A++IG   R I  D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60
Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGI 129
           ++    V++      +  G +DI+ NNA           ++++  + ++ VNL G     
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDD-VDLDHWRKIIDVNLTGTFIVT 119
Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +     M    + G +I  +S+    G     AY  +K  +IG  R+ A ELGK+ I  N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 190 CISPHGVPSE-MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
            ++P  + S+ +  + + +  G  +M               ++G+    E +A    FLA
Sbjct: 180 AVTPGLIESDGVKASPHNEAFGFVEML------------QAMKGKGQP-EHIADVVSFLA 226
Query: 249 SEEAGFITAHNLVIDGG 265
           S++A +IT   L +D G
Sbjct: 227 SDDARWITGQTLNVDAG 243

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 16/245 (6%)
Query: 35  KLFAENGAHIVIADILDELGAA-LASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           K FA+ GA +VI D  D+ GA  +A  IG     +  D++KE DV++AV  A+S  G++D
Sbjct: 27  KRFAKGGAKVVIVD-RDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS---IICT 148
           I+ NNA           +  E+   ++ VN+ G+            E   KG    I+  
Sbjct: 86  ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNV 145
Query: 149 SSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY 208
           +S+ A         Y+ +K  ++ + ++ A EL    IRV  ++P    + +L      +
Sbjct: 146 ASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT----F 201
Query: 209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
           +G+     EE+ K  RD  S+  GR    +D+A+AA FL S +A  IT   L +DGG + 
Sbjct: 202 MGEDS---EEIRKKFRD--SIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSI 256
Query: 269 GTSSM 273
           G  S+
Sbjct: 257 GGRSI 261

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 25/269 (9%)
Query: 5   DDTNKLSSKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAA--LASTIG 62
           +D N   S++L GK                  FA+ GA+I IA  LDE G A      + 
Sbjct: 35  EDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIA-YLDEEGDANETKQYVE 93
Query: 63  GRYIHC-----DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL 117
              + C     D++ E+  +  V+  V   G L+I+ NN            +  E ++  
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
             +N+    H  K A   + +G     II T+S  A  G      YS +K AI+   RS 
Sbjct: 154 FRINIFSYFHVTKAALSHLKQGD---VIINTASIVAYEGNETLIDYSATKGAIVAFTRSL 210
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-LLRGRSAS 236
           +  L + GIRVN ++P  + + ++ +++ +             K V   GS +   R   
Sbjct: 211 SQSLVQKGIRVNGVAPGPIWTPLIPSSFDE-------------KKVSQFGSNVPMQRPGQ 257
Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGG 265
             ++A A ++LAS ++ ++T   + ++GG
Sbjct: 258 PYELAPAYVYLASSDSSYVTGQMIHVNGG 286

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           K     GA  V+ D+ +  G   A  +GG   +   +VT E++V++A+ LA    G++D+
Sbjct: 28  KRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDV 87
Query: 93  MFNNAXXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRK 142
             N A                  +ED + +++VNL G  + I+  A  M      +G ++
Sbjct: 88  AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 143 GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           G II T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P
Sbjct: 148 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 198

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           K     GA  V+ D+ +  G   A  +GG   +   +VT E++V++A+ LA    G++D+
Sbjct: 27  KRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDV 86
Query: 93  MFNNAXXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRK 142
             N A                  +ED + +++VNL G  + I+  A  M      +G ++
Sbjct: 87  AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 146
Query: 143 GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           G II T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P
Sbjct: 147 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 197

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           K     GA  V+ D+ +  G   A  +GG   +   +VT E++V++A+ LA    G++D+
Sbjct: 28  KRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDV 87
Query: 93  MFNNAXXXXXXXX-----XXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-----IEGQRK 142
             N A                  +ED + +++VNL G  + I+  A  M      +G ++
Sbjct: 88  AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 143 GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           G II T+S AA  G +   AYS SK  I+G+    A +L   GIRV  I+P
Sbjct: 148 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 198

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 19/262 (7%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGG----RYIH 67
           S RL GK                  F E GA ++I     ++G   A ++G     ++  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
            D + E+             G +  + NNA              E  K LL+VNL+G+  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRK-LLAVNLDGVFF 119
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA--CELGKHG 185
           G +   + M       SII  SS    +G  +  AY+ SK A+  +++S A  C L  + 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN + P  + + ++           D+   E     R    +  G      D+A   +
Sbjct: 180 VRVNTVHPGYIKTPLV----------DDLPGAEEAMSQRTKTPM--GHIGEPNDIAYICV 227
Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS E+ F T    V+DGGYT
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 35  KLFAENGAHIVIADILDELGA-ALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +L AE GA  VI     E GA A++  +G  G+    +VT  E +E+ ++      G +D
Sbjct: 27  ELLAERGAK-VIGTATSESGAQAISDYLGDNGKGXALNVTNPESIEAVLKAITDEFGGVD 85
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG---QRKGSIICT 148
           I+ NNA              E+   +   NL  I       +KA++ G   +R+G II  
Sbjct: 86  ILVNNAGITRDNLLXRX-KEEEWSDIXETNLTSIFR----LSKAVLRGXXKKRQGRIINV 140
Query: 149 SSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY 208
            S     G      Y+ +K  +IG  +S A E+   G+ VN ++P  + ++         
Sbjct: 141 GSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETDXT------- 193
Query: 209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             KA    +    + +    +  GR     ++A A  FLAS EA +IT   L ++GG
Sbjct: 194 --KALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 51  DELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLN 110
           + L A +A+   GR +  DV   E     +   ++  G    + +NA            N
Sbjct: 66  ETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSN 125
Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
            +D   ++  NL+   + I+     MI  ++ G II  SS + +MG      YS +K  I
Sbjct: 126 -DDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGI 184
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPS---EMLVNAYRKYLGKADMKPEEVCKMVRDSG 227
           IG  ++ A EL K  I VNCI+P  + +   EM  +A ++ +    MK            
Sbjct: 185 IGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMK------------ 232
Query: 228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                R    E+VA  A +L S+ AG++T   + I+GG
Sbjct: 233 -----RMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 15  LTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIGGRYI--HCDVTK 72
           LTGK                +L  + G+ ++I+   +E   +L + +   Y    C++  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71
Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNL--NGILHG 128
           +E+  + +    S    LDI+  NA           + M+D  F  ++ +NL  N IL+ 
Sbjct: 72  KEECSNLI----SKTSNLDILVCNAGITSDTLA---IRMKDQDFDKVIDINLKANFILN- 123
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A K MI+ +R G II  SS   I G      Y  SK  +IG+ +S + E+   GI V
Sbjct: 124 -REAIKKMIQ-KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181
Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + S+M      K       + E + + +        G     EDVA A  FLA
Sbjct: 182 NAVAPGFIKSDMTDKLNEK-------QREAIVQKIP------LGTYGIPEDVAYAVAFLA 228
Query: 249 SEEAGFITAHNLVIDGG 265
           S  A +IT   L ++GG
Sbjct: 229 SNNASYITGQTLHVNGG 245

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 37  FAENGAHIVIA----DILDELGAALASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQL 90
           FA+ GAHIV+     D L E   +L    G R +    DV   E V++ V    S  G  
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK---GSIIC 147
           DI+ NNA           +   D K+     L+ ++  ++  A+ ++ G R    G+II 
Sbjct: 87  DILVNNAGTGSNETI---MEAADEKWQFYWELH-VMAAVR-LARGLVPGMRARGGGAIIH 141
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S  A+        Y+++K A++  +++ A E+ K  IRVNCI+P  + +   +   ++
Sbjct: 142 NASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKE 201
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                    +   + V D  + ++ R AS E++A   +FL SE A +       +DGG
Sbjct: 202 LTKDNGGDWKGYLQSVADEHAPIK-RFASPEELANFFVFLCSERATYSVGSAYFVDGG 258

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 37  FAENGAHIVIA----DILDELGAALASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQL 90
           FA+ GAHIV+     D L E   +L    G R +    DV   E V++ V    S  G  
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRK---GSIIC 147
           DI+ NNA           +   D K+     L  ++      A+ ++ G R    G+II 
Sbjct: 87  DILVNNAGTGSNETI---MEAADEKWQFYWEL--LVMAAVRLARGLVPGMRARGGGAIIH 141
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S  A+        Y+++K A++  +++ A E+ K  IRVNCI+P  + +   +   ++
Sbjct: 142 NASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKE 201
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                    +   + V D  + ++ R AS E++A   +FL SE A +       +DGG
Sbjct: 202 LTKDNGGDWKGYLQSVADEHAPIK-RFASPEELANFFVFLCSERATYSVGSAYFVDGG 258

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           I  D   E D   A++  V   G L  + NNA           +  ED   ++  NL   
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIK-MKTEDFHHVIDNNLTSA 142
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             G + A K M +  R GS++  +S     G +    YS SK  +I +++S A E     
Sbjct: 143 FIGCREALKVMSK-SRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRN 201
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IR N ++P  + ++M           A++K E     V++   +   R  S ++VA+A  
Sbjct: 202 IRFNSVTPGFIETDM----------NANLKDELKADYVKN---IPLNRLGSAKEVAEAVA 248
Query: 246 FLASEEAGFITAHNLVIDGG 265
           FL S+ + +IT   L ++GG
Sbjct: 249 FLLSDHSSYITGETLKVNGG 268

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 38  AENGAHIVIA----DILDELGAALASTIGGRY---IHCDVTKEEDVESAVRLAVSWKGQL 90
           AE GA +V+A    + L+++   +  T  GR    +  D+T +  V   V   +   G++
Sbjct: 32  AEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKAYGRV 89
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           D++ NNA              E ++  + + + G L  I+    A+ E   KG+++  +S
Sbjct: 90  DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNS 147
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
                      AY ++K A++ ++++ A ELG+ GIRVN + P  +    L + +    G
Sbjct: 148 MVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAG 207
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           K     E++      +GS L+ R  + ++VA A LF+AS+ A  IT   L ++ G
Sbjct: 208 KYGTSVEDIYNAAA-AGSDLK-RLPTEDEVASAILFMASDLASGITGQALDVNCG 260

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 18/244 (7%)
Query: 35  KLFAENGAHIV---------IADILDELGAALASTIGGRYIH--CDVTKEEDVESAVRLA 83
           +  A+ GA+IV         I  + DE+ A L+S   G  +H   D TK  ++       
Sbjct: 43  RTLAKAGANIVLNGFGAPDEIRTVTDEV-AGLSS---GTVLHHPADXTKPSEIADXXAXV 98
Query: 84  VSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKG 143
               G  DI+ NNA             +E    +++VNL+   H I+ A     + +  G
Sbjct: 99  ADRFGGADILVNNAGVQFVEKIED-FPVEQWDRIIAVNLSSSFHTIRGAIPPX-KKKGWG 156
Query: 144 SIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN 203
            II  +S+  ++      AY  +K  I GL ++ A E+ + G+ VN I P  V + ++  
Sbjct: 157 RIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEK 216
Query: 204 AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVID 263
                     +  E+V   V   G   + +  ++E VA  AL+LA ++A  IT  ++  D
Sbjct: 217 QIPDQARTRGITEEQVINEVXLKGQPTK-KFITVEQVASLALYLAGDDAAQITGTHVSXD 275
Query: 264 GGYT 267
           GG+T
Sbjct: 276 GGWT 279

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 39/248 (15%)
Query: 35  KLFAENGAHIVIAD----ILD----ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW 86
           + FA +GA +++ D     LD    ELGAA+A+ I       DVT  E + +A   A + 
Sbjct: 29  RAFAASGARLILIDREAAALDRAAQELGAAVAARI-----VADVTDAEAMTAAAAEAEA- 82
Query: 87  KGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGS 144
              + I+ N+A           L  +D  +  +++VN++G+    +   +AM+  +  G+
Sbjct: 83  VAPVSILVNSAGIARLHDA---LETDDATWRQVMAVNVDGMFWASRAFGRAMV-ARGAGA 138
Query: 145 IICTSSSAAIMGGLASHA--YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV 202
           I+   S +  +      A  Y  SK A+  L R+ A E    G+RVN ++P  V +EM +
Sbjct: 139 IVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL 198
Query: 203 NAYRK---YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHN 259
               +   +    DM P               GR     ++A AALFLAS  A ++T   
Sbjct: 199 KMRERPELFETWLDMTP--------------MGRCGEPSEIAAAALFLASPAASYVTGAI 244
Query: 260 LVIDGGYT 267
           L +DGGYT
Sbjct: 245 LAVDGGYT 252

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 41  GAHIVIADI----LDELGAALASTIGGRY--IHCDVTKEEDVESAVRLAVSWKGQLDIMF 94
           GA +VI+D     L E    LA    GR   + CDVT  E V++ +   V   G+LD++ 
Sbjct: 47  GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLV 106
Query: 95  NNAXXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA 152
           NNA           ++M D ++  +L+V L  ++   + AA     G   G +I   ++A
Sbjct: 107 NNAGLGGQTPV---VDMTDEEWDRVLNVTLTSVMRATR-AALRYFRGVDHGGVIV--NNA 160
Query: 153 AIMGGLASHA---YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           +++G  A H+   Y+ +K  ++ L R +A E  + G+R+N +SP          A  K+L
Sbjct: 161 SVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPS--------IARHKFL 212
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFIT 256
            K     E + ++  D      GR+A   +VA    FLAS+ + ++T
Sbjct: 213 EKTS-SSELLDRLASDEAF---GRAAEPWEVAATIAFLASDYSSYMT 255

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 15/256 (5%)
Query: 12  SKRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAALASTIG--GRYIHCD 69
           ++RL GK                   A +GA ++++DI  E   A A++IG   R I  D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60
Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGI 129
           ++    V++      +  G +DI+ NNA           ++++  + ++ VNL G     
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDD-VDLDHWRKIIDVNLTGTFIVT 119
Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +          + G +I  +S+    G     AY  +K  +IG  R+ A ELGK+ I  N
Sbjct: 120 RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            ++P  + S+ +         KA    E    +        +G+   I DV     FLAS
Sbjct: 180 AVTPGLIESDGV---------KASPHNEAFGFVEXLQAXKGKGQPEHIADVVS---FLAS 227
Query: 250 EEAGFITAHNLVIDGG 265
           ++A +IT   L +D G
Sbjct: 228 DDARWITGQTLNVDAG 243

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 138
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 139 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 198 TGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 255
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 256 VAYLIGPGAAAVTAQALNVCGG 277

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 44/230 (19%)
Query: 38  AENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
           +ENGA      I D LGA       G+ +  +VT    +ES +    +  G++DI+ NNA
Sbjct: 38  SENGAQA----ISDYLGA------NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 98  XXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM 155
                      + M+D ++  ++  NL+ +    K   +AM++ +R G II        +
Sbjct: 88  GITRDNLL---MRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK-KRHGRIIT-------I 136
Query: 156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK 215
           GG A+  Y+ +K  +IG ++S A E+   GI VN ++P              ++  +D +
Sbjct: 137 GGQAN--YAAAKAGLIGFSKSLAREVASRGITVNVVAPG-------------FIETSDDQ 181
Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +   V        GR    +++A A  FLAS+EA +IT   L ++GG
Sbjct: 182 RAGILAQVP------AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 225

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           DV   E  E      ++  G++D++ NNA           +   D   ++  +L+ + + 
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMK-MTKGDWDAVMRTDLDAMFNV 141
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K     M+E +R G I+   S     G      Y+ +K  I G  ++ A E  K GI V
Sbjct: 142 TKQFIAGMVE-RRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200
Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N +SP G  +  +V A  + + +A + P+           +  GR    ++VA    FL 
Sbjct: 201 NTVSP-GYLATAMVEAVPQDVLEAKILPQ-----------IPVGRLGRPDEVAALIAFLC 248
Query: 249 SEEAGFITAHNLVIDGG 265
           S++AGF+T  +L I+GG
Sbjct: 249 SDDAGFVTGADLAINGG 265

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 134
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 135 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 193
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 194 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 251
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 252 VAYLIGPGAAAVTAQALNVCGG 273

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 62  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 118
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 119 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 177
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 178 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 235
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 236 VAYLIGPGAAAVTAQALNVCGG 257

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 138
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 139 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 255
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 256 VAYLIGPGAAAVTAQALNVCGG 277

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATA---ELADELWLDVVETNLTGV 134
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 135 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 193
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 194 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 251
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 252 VAYLIGPGAAAVTAQALNVCGG 273

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G++D++ NNA           +  ED + ++  NL  + +  K     M+E +  G II 
Sbjct: 90  GEIDVLVNNAGITRDVVFRK-MTREDWQAVIDTNLTSLFNVTKQVIDGMVE-RGWGRIIN 147
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            SS     G      YS +K  I G   S A E+   G+ VN +SP  + ++M+      
Sbjct: 148 ISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV------ 201
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              KA ++P+ + K+V    ++   R  S +++     +LASEE+GF T  +  ++GG  
Sbjct: 202 ---KA-IRPDVLEKIV---ATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLH 254
Query: 268 TG 269
            G
Sbjct: 255 MG 256

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 138
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 139 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 255
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 256 VAYLIGPGAAAVTAQALNVCGG 277

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATA---ELADELWLDVVETNLTGV 138
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 139 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE     R +  +  GR     +VA+ 
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 255
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 256 VAYLIGPGAAAVTAQALNVCGG 277

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 37  FAENGAHIVIA----DILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           FA+ GA +VI     + L+E    +    G    +  DV   +D++  +       G++D
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRID 85
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           L++     ++++ LNG  +  +   K  IE   KG+II   ++
Sbjct: 86  ILINNAAGNFICPAED-LSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVAT 144
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGVPSEMLVNAYRKYLG 210
            A   G      + +K  ++   ++ A E G K+GIRVN I+P   P E    A + ++ 
Sbjct: 145 YAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPG--PIERTGGADKLWIS 202
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                 EE  K  R   S+  GR  + E++A  A +L S+EA +I       DGG
Sbjct: 203 ------EEXAK--RTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G++DI+ NNA              E  + ++ VN+NG     K+    M+     GSII 
Sbjct: 80  GRIDILVNNAGIEQYSPLHLT-PTEIWRRIIDVNVNGSYLMAKYTIPVML-AIGHGSIIN 137
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S  +      + AY  SK A++GL RS A +     IR N + P  + + M++ A + 
Sbjct: 138 IASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAVCPGTIMTPMVIKAAKM 196
Query: 208 YLGKADMKPEEVCKMVRDSGSL-LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            +G+ +     V + + + G     GR    E+VA+   FLAS+ + FIT   L +DGG
Sbjct: 197 EVGEDE---NAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 16/236 (6%)
Query: 37  FAENGAHIVIADILDEL-----GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +A+ GA IV  DI  EL      A  A+ I      CDVT E+ +++ V    S  G +D
Sbjct: 54  YAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIID 113
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
           I+ NNA           + M   +F  ++ ++LN      K    +MI+ +  G II   
Sbjct: 114 ILVNNAGIIRRVPM---IEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINIC 169
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S  + +G     AY+ +K  +  L ++ A E G+  I+ N I P G  +       R+  
Sbjct: 170 SMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGP-GYIATPQTAPLRELQ 228
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                 P +   + +   +    R    ED+   A+FLAS+ + F+  H L +DGG
Sbjct: 229 KDGSRHPFDQFIIAKTPAA----RWGEAEDLMGPAVFLASDASNFVNGHILYVDGG 280

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G +D++ NNA           +  E      SVNL  +    +  A+ MI     GSI+ 
Sbjct: 75  GPVDLLVNNAALVIMQPFLE-VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVN 133
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            SS  A +       YS +K A+  L ++ A ELG H IRVN ++P  V ++M       
Sbjct: 134 VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM------- 186
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             GK      E  + +++   L   + A +EDV  + LFL S+ +   +   +++D GY
Sbjct: 187 --GKKVSADPEFARKLKERHPLR--KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 17/236 (7%)
Query: 36  LFAENGAHIVIA----DILDELGAALASTIGGRY--IHCDVTKEEDVESAVRLAVSWKGQ 89
           L +  GA  VIA    D+L      ++S  G +   I CDV   + V++ V   +   G 
Sbjct: 45  LLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
            +I+ NNA           L+    K +  + LNG         K +I+ Q+  + +  +
Sbjct: 105 PNIVINNAAGNFISPTER-LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSIT 163
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           +  A  G       + +K  +  +++S A E GK+G+R N I P  + ++    A+ +  
Sbjct: 164 TIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK---GAFSRLD 220
Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                + E +       G +  GR  ++E++A  A FL S+ A +I    +  DGG
Sbjct: 221 PTGTFEKEMI-------GRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 68  CDVTKEEDVESAVR-LAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
           CD+    + +  ++ +A  + G+L+I+ NNA              +D   ++  N     
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKD-FTEKDYNIIMGTNFEAAY 135
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H +   A  +++  + G++I  SS A      +   YS SK AI  + +S ACE  K  I
Sbjct: 136 H-LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 194
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P  + + ++  A +    K   + EE+   +  +     GR+   ++V+    F
Sbjct: 195 RVNSVAPGVILTPLVETAIK----KNPHQKEEIDNFIVKTP---MGRAGKPQEVSALIAF 247
Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L    A +IT   +  DGG+T
Sbjct: 248 LCFPAASYITGQIIWADGGFT 268

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 35  KLFAENGAHIVIADI------LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG 88
           K FA+ GA +V+ D       +DE+ AA       ++   DV K  D E+ ++  +   G
Sbjct: 340 KWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH---DVAK--DSEAIIKNVIDKYG 394
Query: 89  QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICT 148
            +DI+ NNA           ++ ++   +  V+L G  +  + A    +E Q  G II  
Sbjct: 395 TIDILVNNAGILRDRSFAK-MSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF-GRIINI 452
Query: 149 SSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
           +S++ I G      YS SK  I+GL+++ A E  K+ I+VN ++PH
Sbjct: 453 TSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL--LSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNA             + D  +L  +  NL G+
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGV 138
Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 139 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    +    ++  EE     R +  +  GR     +VA+ 
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFD--RITARVPIGRYVQPSEVAEM 255
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 256 VAYLIGPGAAAVTAQALNVCGG 277

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           Y++ D++  +     +  A    G LDI+ NNA             ++    ++++NL+ 
Sbjct: 59  YLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEE-FPVDKWNAIIALNLSA 117
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           + HG   AA  +++ Q  G II  +S+  ++  +   AY  +K  ++GL + TA E    
Sbjct: 118 VFHGTA-AALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGK 176
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI-----ED 239
           GI  N I P  V + ++    ++    +  K  ++    R+   LL  +  S+     E 
Sbjct: 177 GITCNAICPGWVRTPLV---EKQIEAISQQKGIDIEAAARE---LLAEKQPSLQFVTPEQ 230
Query: 240 VAQAALFLASEEAGFITAHNLVIDGGYT 267
           +  AA+FL+S  A  +T   L +DGG+T
Sbjct: 231 LGGAAVFLSSAAADQMTGTTLSLDGGWT 258

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLNGI 125
           CDVT  ++V +AV  AV   G + I+ N+A            +++D  +  +L  NL G+
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETA---DLDDALWADVLDTNLTGV 136
Query: 126 LHGIKHAAKAMIEGQRK---GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
               +   +A   G R+   G I+  +S+    G + +  Y+ SK  ++G  +S   EL 
Sbjct: 137 FRVTREVLRA--GGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELA 194
Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           K GI VN + P  V + M       Y     +  +EV +  R +  +  GR ++ E+VA 
Sbjct: 195 KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHE--RFNAKIPLGRYSTPEEVAG 252
Query: 243 AALFLASEEAGFITAHNLVIDGG 265
              +L ++ A  ITA  L + GG
Sbjct: 253 LVGYLVTDAAASITAQALNVCGG 275

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G LD++ NNA            + +     ++VNL           KAM+     G+II 
Sbjct: 97  GGLDVLVNNAGISHPQPVVDT-DPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIIT 155
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S+AA+      +AY  SK  ++   +  A ELG HGIR N + P  V +EM     R 
Sbjct: 156 VASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM---GQRV 212
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           +  +A   P     M+     +  GR A   +V+ A ++LAS+ A  I   ++ +DGGYT
Sbjct: 213 WGDEAKSAP-----MI---ARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT 264
Query: 268 TG 269
            G
Sbjct: 265 MG 266

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 17/231 (7%)
Query: 41  GAHIVIA----DILDELGAALASTIGGRY--IHCDVTKEEDVESAVRLAVSWKGQLDIMF 94
           GA  VIA    D+L      ++S  G +   I CDV   + V++ V   +   G  +I+ 
Sbjct: 50  GAQCVIASRKXDVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVI 109
Query: 95  NNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI 154
           NNA           L+    K +  + LNG         K +I+ Q+  + +  ++  A 
Sbjct: 110 NNAAGNFISPTER-LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE 168
Query: 155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM 214
            G       + +K  +   ++S A E GK+G R N I P  + ++    A+ +       
Sbjct: 169 TGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTK---GAFSRLDPTGTF 225
Query: 215 KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           + E +       G +  GR  ++E++A  A FL S+ A +I    +  DGG
Sbjct: 226 EKEXI-------GRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 37  FAENGAHIVI---ADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD 91
           +A+ GA + I   +   DE    L  T G   +   C+++  + VE  +       G +D
Sbjct: 54  YAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTID 113
Query: 92  IMFNNAXXXXXXXXXXXL-NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           +   NA           + N +    ++SV+LNG+ +   H    + +   KGS+I TSS
Sbjct: 114 VFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY-CSHNIGKIFKKNGKGSLIITSS 172
Query: 151 SAAIMGGLAS--HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY 208
            +  +  +      Y+ +K A   LA+S A E      RVN ISP  + +++   A +  
Sbjct: 173 ISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK-- 229
Query: 209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
               DMK  +  ++         GR    +++    L+LAS  + F T  ++VIDGGYT
Sbjct: 230 ----DMK-AKWWQLTP------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 58  ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL 117
           A+ + G  +  DV+ +E V + +       GQ  I+ NNA           + M+D ++ 
Sbjct: 73  ANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLL---VRMKDDEWF 129
Query: 118 LSVNLNGILHGIKHAAKAMIEGQ---RKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA 174
             VN N  L+ +   +KA++ G    R G II   S    MG      Y+ +K  + G  
Sbjct: 130 DVVNTN--LNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFT 187
Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS--GSLLRG 232
           R+ A E+G   I VN ++P  + ++M                 E+ +  R++  G +  G
Sbjct: 188 RALAREVGSRAITVNAVAPGFIDTDM---------------TRELPEAQREALLGQIPLG 232
Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           R    E++A+   FLAS+ A ++T   + ++GG
Sbjct: 233 RLGQAEEIAKVVGFLASDGAAYVTGATVPVNGG 265

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 5   DDTNKLSS--KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILD--ELGAALAST 60
           DD+   +   K L GK                ++FA +GAH+V  D+    E  A  AS 
Sbjct: 207 DDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK 266
Query: 61  IGGRYIHCDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           +GG  +  DVT ++ V+  +  L     G+ DI+ NNA            NM+D ++  +
Sbjct: 267 VGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLA---NMDDARWDAV 323
Query: 118 LSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
           L+VNL   L         + EG          G +I  SS A I G      Y+ +K  +
Sbjct: 324 LAVNLLAPLR--------LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 375
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           IG+ ++ A  L   GI +N ++P  + ++M               P    ++ R   SLL
Sbjct: 376 IGITQALAPGLAAKGITINAVAPGFIETQMTA-----------AIPLATREVGRRLNSLL 424
Query: 231 RGRSASIEDVAQAALFLASEEAGFITAH 258
           +G      DVA+A  + AS  +  +T +
Sbjct: 425 QG--GQPVDVAEAIAYFASPASNAVTGN 450

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 37  FAENGAHIVIADILDEL-----GAALASTI-------GGRYIHCDVTKEEDVESAVRLAV 84
           FAE GA +V+ D+  +      G+  A  +       GG+ +  +    E+ E  V+ A+
Sbjct: 50  FAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAV-ANYDSVEEGEKVVKTAL 108
Query: 85  SWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS 144
              G++D++ NNA           ++ ED   +  V+L G    +  AA   ++ Q+ G 
Sbjct: 109 DAFGRIDVVVNNAGILRDRSFAR-ISDEDWDIIHRVHLRGSFQ-VTRAAWEHMKKQKYGR 166
Query: 145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNA 204
           II TSS++ I G      YS +K  ++GLA S A E  K  I  N I+P+   S M    
Sbjct: 167 IIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPN-AGSRMTQTV 225
Query: 205 YRKYLGKADMKPEEVCKMV 223
             + L +A +KPE V  +V
Sbjct: 226 MPEDLVEA-LKPEYVAPLV 243

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 5   DDTNKLSS--KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILD--ELGAALAST 60
           DD+   +   K L GK                ++FA +GAH+V  D+    E  A  AS 
Sbjct: 191 DDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK 250
Query: 61  IGGRYIHCDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           +GG  +  DVT ++ V+  +  L     G+ DI+ NNA            NM+D ++  +
Sbjct: 251 VGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLA---NMDDARWDAV 307
Query: 118 LSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
           L+VNL   L         + EG          G +I  SS A I G      Y+ +K  +
Sbjct: 308 LAVNLLAPLR--------LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 359
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           IG+ ++ A  L   GI +N ++P  + ++M               P    ++ R   SLL
Sbjct: 360 IGITQALAPGLAAKGITINAVAPGFIETQMTA-----------AIPLATREVGRRLNSLL 408
Query: 231 RGRSASIEDVAQAALFLASEEAGFITAH 258
           +G      DVA+A  + AS  +  +T +
Sbjct: 409 QG--GQPVDVAEAIAYFASPASNAVTGN 434

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 5   DDTNKLSS--KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILD--ELGAALAST 60
           DD+   +   K L GK                ++FA +GAH+V  D+    E  A  AS 
Sbjct: 183 DDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK 242
Query: 61  IGGRYIHCDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           +GG  +  DVT ++ V+  +  L     G+ DI+ NNA            NM+D ++  +
Sbjct: 243 VGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLA---NMDDARWDAV 299
Query: 118 LSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
           L+VNL   L         + EG          G +I  SS A I G      Y+ +K  +
Sbjct: 300 LAVNLLAPLR--------LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 351
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           IG+ ++ A  L   GI +N ++P  + ++M               P    ++ R   SLL
Sbjct: 352 IGITQALAPGLAAKGITINAVAPGFIETQMTA-----------AIPLATREVGRRLNSLL 400
Query: 231 RGRSASIEDVAQAALFLASEEAGFITAH 258
           +G      DVA+A  + AS  +  +T +
Sbjct: 401 QG--GQPVDVAEAIAYFASPASNAVTGN 426

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 5   DDTNKLSS--KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILD--ELGAALAST 60
           DD+   +   K L GK                ++FA +GAH+V  D+    E  A  AS 
Sbjct: 220 DDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK 279
Query: 61  IGGRYIHCDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           +GG  +  DVT ++ V+  +  L     G+ DI+ NNA            NM+D ++  +
Sbjct: 280 VGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLA---NMDDARWDAV 336
Query: 118 LSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
           L+VNL   L         + EG          G +I  SS A I G      Y+ +K  +
Sbjct: 337 LAVNLLAPLR--------LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 388
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           IG+ ++ A  L   GI +N ++P  + ++M               P    ++ R   SLL
Sbjct: 389 IGITQALAPGLAAKGITINAVAPGFIETQMTA-----------AIPLATREVGRRLNSLL 437
Query: 231 RGRSASIEDVAQAALFLASEEAGFITAH 258
           +G      DVA+A  + AS  +  +T +
Sbjct: 438 QG--GQPVDVAEAIAYFASPASNAVTGN 463

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 5   DDTNKLSS--KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILD--ELGAALAST 60
           DD+   +   K L GK                ++FA +GAH+V  D+    E  A  AS 
Sbjct: 199 DDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK 258
Query: 61  IGGRYIHCDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--L 117
           +GG  +  DVT ++ V+  +  L     G+ DI+ NNA            NM+D ++  +
Sbjct: 259 VGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLA---NMDDARWDAV 315
Query: 118 LSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
           L+VNL   L         + EG          G +I  SS A I G      Y+ +K  +
Sbjct: 316 LAVNLLAPLR--------LTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 367
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           IG+ ++ A  L   GI +N ++P  + ++M               P    ++ R   SLL
Sbjct: 368 IGITQALAPGLAAKGITINAVAPGFIETQMTA-----------AIPLATREVGRRLNSLL 416
Query: 231 RGRSASIEDVAQAALFLASEEAGFITAH 258
           +G      DVA+A  + AS  +  +T +
Sbjct: 417 QG--GQPVDVAEAIAYFASPASNAVTGN 442

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
           C V   E  E  V+  V+  GQ+D    NA            ++E    ++ V+LNG  H
Sbjct: 80  CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG-SVEAWNHVVQVDLNGTFH 138
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELGKHG 185
             K       E +  GS++ T+S +  +        +Y+++K   I +ARS A E  +  
Sbjct: 139 CAKAVGHHFKE-RGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RDF 196
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
            RVN ISP  + +           G +D  P+E  ++      +  GR    +++  A +
Sbjct: 197 ARVNSISPGYIDT-----------GLSDFVPKETQQLWHSM--IPMGRDGLAKELKGAYV 243
Query: 246 FLASEEAGFITAHNLVIDGGYTT 268
           + AS+ + + T  +L+IDGGYTT
Sbjct: 244 YFASDASTYTTGADLLIDGGYTT 266

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 36  LFAENGAHIVIADILDELGAA---------LASTIGGRYIHCDVTKEEDVESAVRLAVSW 86
           L A  G    +AD+L + GA          L    G RY+ CD+ K+ D      L    
Sbjct: 25  LAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLD------LLFEK 78
Query: 87  KGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSII 146
             ++DI+  NA            N ED K  +      ++  +++   AM E +  G I+
Sbjct: 79  VKEVDILVLNAGGPKAGFFDELTN-EDFKEAIDSLFLNMIKIVRNYLPAMKE-KGWGRIV 136
Query: 147 CTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR 206
             +S + I      +  + ++ A+ G  ++ + E+  +GI VNC++P    +E +     
Sbjct: 137 AITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV----- 191
Query: 207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
                 ++  EE  K V +S   +R R A  E++A    FL SE+A ++T   +V+DGG 
Sbjct: 192 -----KELLSEEKKKQV-ESQIPMR-RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 244
Query: 267 T 267
           +
Sbjct: 245 S 245

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 97/236 (41%), Gaps = 17/236 (7%)
Query: 41  GAHIVIADILDELGAALASTIGGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAX 98
           G  +  AD L E   AL    G R I    DV     +ES V  A    G +DI   NA 
Sbjct: 50  GYPLATADDLAET-VALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAG 108
Query: 99  XXXXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG 156
                       +E  ++  ++  NL G  + I   A  MI+ +  G I+  SS      
Sbjct: 109 ISTIALLP---EVESAQWDEVIGTNLTGTFNTIAAVAPGMIK-RNYGRIVTVSSMLGHSA 164
Query: 157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY-----RKYLGK 211
             A  +Y  SK  +IGL +  A +L  +GI VN ++P  + + M  N +     R  L K
Sbjct: 165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEK 224
Query: 212 ADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             +K  E    V  S  L        E+V +A LFL  E +  IT   L ID G T
Sbjct: 225 PTLKDVE---SVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 35  KLFAENGAHIVIAD--------ILDELGAALASTIGGRYI--HCDVTKEEDVESAVRLAV 84
           K   E G+++VIA           DEL A L  T   R I   C++  EE+V + V+  +
Sbjct: 36  KELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95
Query: 85  SWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS 144
              G+++ + NN            ++ +    +L  NL G  +  K    + ++ +  GS
Sbjct: 96  DTFGKINFLVNNGGGQFLSPAEH-ISSKGWHAVLETNLTGTFYMCKAVYSSWMK-EHGGS 153
Query: 145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNA 204
           I+           LA H+   ++  +  L +S A E    GIR+NC++P  + S+  V  
Sbjct: 154 IVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN 212
Query: 205 YRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI---EDVAQAALFLASEEAGFITAHNLV 261
           Y  + G++  +           GS  +  +  I   E+V+    FL S  A FIT  ++ 
Sbjct: 213 YGSW-GQSFFE-----------GSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVD 260
Query: 262 IDGGYTTGTSS 272
           +DGG +  T S
Sbjct: 261 VDGGRSLYTHS 271

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 42  AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXX 101
           A  V+A I +  G A+A       I  DV    D+ +         G+LD + NNA    
Sbjct: 64  ADAVVAAITESGGEAVA-------IPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVD 116
Query: 102 XXXXXXXLNMEDVKFLLSVNLNGIL----HGIKHAAKAMIEGQRKGSIICTSSSAAIMGG 157
                   ++E ++  L VN+ G +      ++  ++ +  GQ  G+I+  SS AAI+G 
Sbjct: 117 YPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSR-LYSGQ-GGAIVNVSSXAAILGS 174
Query: 158 LASHA-YSLSKEAI----IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA 212
              +  Y+ SK AI    IGLAR  A E    GIRVN + P  + +++  +      G  
Sbjct: 175 ATQYVDYAASKAAIDTFTIGLAREVAAE----GIRVNAVRPGIIETDLHASG-----GLP 225
Query: 213 DMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           D   E        + S+   R+   E+VA A L+L S  A ++T   L + GG
Sbjct: 226 DRAREX-------APSVPXQRAGXPEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLN 123
           + CDVT  + V+ A       +G ++++ +NA           + M + KF  +++ NL 
Sbjct: 58  VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL---MRMTEEKFEKVINANLT 114
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G     + A+++M +  + G +I   S +   G      Y+ SK  +IG+ARS A EL K
Sbjct: 115 GAFRVAQRASRSM-QRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSK 173
Query: 184 HGIRVNCISPHGVPSEML-VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
             +  N ++P  + ++M      R   G     P +              R  +  +VA 
Sbjct: 174 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK--------------RVGTPAEVAG 219
Query: 243 AALFLASEEAGFITAHNLVIDGGYTTG 269
              FLASE+A +I+   + +DGG   G
Sbjct: 220 VVSFLASEDASYISGAVIPVDGGMGMG 246

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 27/247 (10%)
Query: 36  LFAENGAHIVI----ADILDEL-GAALASTIGGRYIH---CDVTKEEDVESAVRLAVSWK 87
           LFA+ GA++ I    ++ L+E     L S +  + ++    DVT E+  +  +   +   
Sbjct: 25  LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFL---LSVNLNGILHGIKHAAKAMIEGQRKGS 144
           G++D++ NNA              + +      L +NL  ++   K     ++    KG 
Sbjct: 85  GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGE 142
Query: 145 IICTSSSAAIMGGLASHA----YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM 200
           I+  SS   I+ G  +      Y+++K A+    RSTA +L K GIRVN +SP      M
Sbjct: 143 IVNVSS---IVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPG-----M 194
Query: 201 LVNAYRKYLGKADMKPEEVCK-MVRDSGSLLRGRSASIEDVAQAALFLASEEAGF-ITAH 258
           +   +   +G  D   ++    M      +  G +   E +A   LFLA     F I   
Sbjct: 195 VETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQ 254
Query: 259 NLVIDGG 265
           ++V DGG
Sbjct: 255 SIVADGG 261

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 76  VESAVRL---AVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHA 132
           VE  VR+   AV   G+LDI+ +N+           +  E+   + ++N  G     + A
Sbjct: 91  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRGQFFVAREA 149
Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNCI 191
            K +  G   G +I   S       +  HA YS SK AI   AR  A ++    I VN +
Sbjct: 150 YKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVV 206
Query: 192 SPHGVPSEMLVNAYRKYLGKAD-MKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +P G+ ++M     R+Y+   + +  EEV +      S LR     I D+A+   FLAS 
Sbjct: 207 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVVCFLASN 265
Query: 251 EAGFITAHNLVIDGG 265
           + G++T   + IDGG
Sbjct: 266 DGGWVTGKVIGIDGG 280

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 76  VESAVRL---AVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHA 132
           VE  VR+   AV   G+LDI+ +N+           +  E+   + ++N  G     + A
Sbjct: 91  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRGQFFVAREA 149
Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNCI 191
            K +  G   G +I   S       +  HA YS SK AI   AR  A ++    I VN +
Sbjct: 150 YKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVV 206
Query: 192 SPHGVPSEMLVNAYRKYLGKAD-MKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +P G+ ++M     R+Y+   + +  EEV +      S LR     I D+A+   FLAS 
Sbjct: 207 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVVCFLASN 265
Query: 251 EAGFITAHNLVIDGG 265
           + G++T   + IDGG
Sbjct: 266 DGGWVTGKVIGIDGG 280

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 37  FAENGAHIVIADILDELGAALASTIGG--------RYIHCDVTKEEDVESAVRLAVSWKG 88
           FA  GA +V++D+ D+   AL   + G          + CDV   +++      A    G
Sbjct: 51  FARRGARLVLSDV-DQ--PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107
Query: 89  QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICT 148
            +D++F+NA           +N +D ++++ ++L G +H ++     ++E    G I  T
Sbjct: 108 GVDVVFSNAGIVVAGPLAQ-MNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFT 166
Query: 149 SSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR 206
           +S A ++       Y ++K  ++GLA + A E+  +GI V+ + P  V ++++ N+ R
Sbjct: 167 ASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSER 224

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 37  FAENGAHIVIA------------DILDELG-AALASTIGGRYIHCDVTKEEDVESAVRLA 83
           FA+ GA++V+               +++LG +ALA       I  D+T   +VE+A+  A
Sbjct: 28  FAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA-------IKADLTNAAEVEAAISAA 80
Query: 84  VSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKG 143
               G++  + + A           ++      +L VNL  +    K A   M +G   G
Sbjct: 81  ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG---G 137
Query: 144 SIICTSSSAAI-MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV 202
           +I+  SS A    GG  + AY+ SK A++   R  A E+G   IRVN + P      M+ 
Sbjct: 138 AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPG-----MIS 191
Query: 203 NAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVI 262
             +     K +++        R +G+    R  S EDVA    FLAS++A ++T     I
Sbjct: 192 TTFHDTFTKPEVRE-------RVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDI 244
Query: 263 DGG 265
           +GG
Sbjct: 245 NGG 247

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 37  FAENGAHIVIADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN 95
           F E G  +   DI ++  A  A       Y H DV     ++  V  A+    ++D++ N
Sbjct: 22  FLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81
Query: 96  NAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM 155
           NA           L  E+  ++LSV L       +     +I  + KG II  +S+ A  
Sbjct: 82  NACRGSKGILSSLL-YEEFDYILSVGLKAPYELSRLCRDELI--KNKGRIINIASTRAFQ 138
Query: 156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK 215
               S AY+ +K  I+ L  + A  LG   + VNCI+P        +N   +        
Sbjct: 139 SEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPG------WINVTEQ-------- 183
Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            +E  +   D  ++  G+  + +D++   LFL  ++  FIT   +++DGG
Sbjct: 184 -QEFTQ--EDCAAIPAGKVGTPKDISNMVLFLCQQD--FITGETIIVDGG 228

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G +D++ NNA           +  E       VNL  ++   +  A+ +I     G+I+ 
Sbjct: 75  GPVDLLVNNAAVALLQPFLE-VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            SS  +         Y  +K A+  L +  A ELG H IRVN ++P  V + M       
Sbjct: 134 VSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM------- 186
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             G+A        K + +   L  G+ A +E V  A LFL S+ +G  T   L ++GG+
Sbjct: 187 --GQATWSDPHKAKTMLNRIPL--GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G +D++ NNA           +  E       VNL  ++   +  A+ +I     G+I+ 
Sbjct: 75  GPVDLLVNNAAVALLQPFLE-VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            SS  +         Y  +K A+  L +  A ELG H IRVN ++P  V + M       
Sbjct: 134 VSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM------- 186
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             G+A        K + +   L  G+ A +E V  A LFL S+ +G  T   L ++GG+
Sbjct: 187 --GQATWSDPHKAKTMLNRIPL--GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLN 123
           +  DVT  + V+ A       +G ++++ +NA           + M + KF  +++ NL 
Sbjct: 78  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL---MRMTEEKFEKVINANLT 134
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G     + A+++M +  + G +I  +S + + G      Y+ SK  +IG+ARS A EL K
Sbjct: 135 GAFRVAQRASRSM-QRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSK 193
Query: 184 HGIRVNCISPHGVPSEML-VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
             +  N ++P  + ++M      R   G     P +              R  +  +VA 
Sbjct: 194 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK--------------RVGTPAEVAG 239
Query: 243 AALFLASEEAGFITAHNLVIDGGYTTG 269
              FLASE+A +I+   + +DGG   G
Sbjct: 240 VVSFLASEDASYISGAVIPVDGGMGMG 266

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Query: 41  GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXX 100
           G H    D L E+ A L   +       +++  + ++    +A      +DI+ NNA   
Sbjct: 55  GLHGTREDKLKEIAADLGKDV--FVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT 112
Query: 101 XXXXXXXXLNMEDVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL 158
                   + M+D  +  +L+VNL       +    +M+  +R G II  +S   ++G  
Sbjct: 113 RDGLF---VRMQDQDWDDVLAVNLTAASTLTRELIHSMMR-RRYGRIINITSIVGVVGNP 168
Query: 159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE 218
               Y  +K  +IG +++ A E+    I VNCI+P  + S M      K       + E 
Sbjct: 169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK-------QKEA 221
Query: 219 VCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           +  M+         R    E++A A ++LAS+EA ++T   L I+GG
Sbjct: 222 IMAMIPMK------RMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 37  FAENGAHIVIADI---LD----ELGAALASTI------GGRYIH--CDVTKEEDVESAVR 81
           FA  GA +V+ DI   LD      G+A  S +      GG  +    +V   +     ++
Sbjct: 47  FAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106
Query: 82  LAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR 141
            AV   G LD++ NNA            + E+   +++V+L G    ++HAA A   G  
Sbjct: 107 TAVETFGGLDVLVNNAGIVRDRMIANT-SEEEFDAVIAVHLKGHFATMRHAA-AYWRGLS 164
Query: 142 K------GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           K      G II TSS A + G +    YS +K  I  L    A E+G++G+ VN I+P  
Sbjct: 165 KAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS- 223
Query: 196 VPSEMLVNAYRKYLGKAD-----MKPEEVCKMV 223
             + M    + + +   D     M PE V  +V
Sbjct: 224 ARTRMTETVFAEMMATQDQDFDAMAPENVSPLV 256

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLN------MEDVKFLL 118
           Y+  DVT+EEDV    R AV+   +   +F              L       +E  + +L
Sbjct: 43  YVEGDVTREEDV----RRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVL 98
Query: 119 SVNLNGILHGIKHAAKAM------IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG 172
            VNL G  + ++ AA AM       EGQR G I+ T+S AA  G +   AY+ SK  ++ 
Sbjct: 99  EVNLLGTFNVLRLAAWAMRENPPDAEGQR-GVIVNTASVAAFEGQIGQAAYAASKGGVVA 157
Query: 173 LARSTACELGKHGIRVNCISP 193
           L    A EL   GIRV  ++P
Sbjct: 158 LTLPAARELAGWGIRVVTVAP 178

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLN 123
           +  DVT  + V+ A       +G ++++ +NA           + M + KF  +++ NL 
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL---MRMTEEKFEKVINANLT 114
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G     + A+++M +  + G +I   S + + G      Y+ SK  +IG+ARS A EL K
Sbjct: 115 GAFRVAQRASRSM-QRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSK 173
Query: 184 HGIRVNCISPHGVPSEML-VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
             +  N ++P  + ++M      R   G     P +              R  +  +VA 
Sbjct: 174 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK--------------RVGTPAEVAG 219
Query: 243 AALFLASEEAGFITAHNLVIDGGYTTG 269
              FLASE+A +I+   + +DGG   G
Sbjct: 220 VVSFLASEDASYISGAVIPVDGGMGMG 246

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 90  LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS 149
            DI+ NNA             + D   ++ VNL  +    +  AK ++   R G ++  +
Sbjct: 80  FDILVNNAGIIRRADSVEFSEL-DWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIA 138
Query: 150 SSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL 209
           S  +  GG+   +Y+ +K  + GL +  A E    GI VN I+P  + +     A R   
Sbjct: 139 SLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN-TEALR--- 194
Query: 210 GKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
                         R+   L R   GR    ED+A AA+FL+S  A ++    L +DGG+
Sbjct: 195 ----------ADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW 244

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMED-VKFLLSVNL 122
           +++  DVTK+ED+   V  A+S  G++D + NNA              ED    ++  NL
Sbjct: 60  QFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNL 119
Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAA--IMGGLASHAYSLSKEAIIGLARSTACE 180
             + H +K     M   Q  G II      A    G +   A++ +K  ++ L ++ A E
Sbjct: 120 TAVFHLLKLVVPVM-RKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYE 178
Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
             ++GI  N + P  +  EM     ++             + +++  + + GRS + ED+
Sbjct: 179 EAEYGITANMVCPGDIIGEMKEATIQE------------ARQLKEHNTPI-GRSGTGEDI 225
Query: 241 AQAALFLASEEAGFITAHNLVIDG 264
           A+   FL  +++  IT   + + G
Sbjct: 226 ARTISFLCEDDSDMITGTIIEVTG 249

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGRYIHC--DVTKEEDVESAVRLAVSWKGQLDIMF 94
           F   GA + + D   E    L    GG  +    DV   +D + A    ++  G++D + 
Sbjct: 25  FVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLI 84
Query: 95  NNAXXXXXXXXXXXLNME--DVKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
            NA           L  +  D  F  +  VN+ G +H +K    A++    +GS++ T S
Sbjct: 85  PNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALV--SSRGSVVFTIS 142
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
           +A          Y+ +K A++GL R  A EL  H +RVN ++P G+ ++ L       L 
Sbjct: 143 NAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTD-LRGPSSLGLS 200
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +  +    +  M++    L  GR  ++E+   A +F A+ 
Sbjct: 201 EQSISSVPLADMLKS--VLPIGRMPALEEYTGAYVFFATR 238

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 19/206 (9%)
Query: 62  GGRY--IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLS 119
           GGR   I  D    E +E A+R  V   G LDI+ N+A             + D   + +
Sbjct: 80  GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET-TVADFDEVXA 138
Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTAC 179
           VN       I+ A++ + +G R   I   S+ A ++       YS SK A+ GL +  A 
Sbjct: 139 VNFRAPFVAIRSASRHLGDGGRI--ITIGSNLAELVPWPGISLYSASKAALAGLTKGLAR 196
Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           +LG  GI VN + P    +              D  P +          +  G     +D
Sbjct: 197 DLGPRGITVNIVHPGSTDT--------------DXNPADGDHAEAQRERIATGSYGEPQD 242
Query: 240 VAQAALFLASEEAGFITAHNLVIDGG 265
           +A    +LA  +  F+T  +L IDGG
Sbjct: 243 IAGLVAWLAGPQGKFVTGASLTIDGG 268

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 58  ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFL 117
           A ++G   +  D+ K+ D +  V+ A+   G L ++ + A           L+ E+ + +
Sbjct: 40  AQSLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVH-AAAVNVRKPALELSYEEWRRV 97
Query: 118 LSVNLNGILHGIKHAAKAMIE-GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           L ++L+      + AA  M E G  +   I + ++    G +   AY+ +K A++GL R+
Sbjct: 98  LYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA 157
Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A E  + GIRVN + P  V +E  +             PE    +   +  +  GR A 
Sbjct: 158 LAKEWARLGIRVNLLCPGYVETEFTL--------PLRQNPELYEPI---TARIPMGRWAR 206
Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            E++A+ A  L  +EA ++T   + +DGG+
Sbjct: 207 PEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
            +VN  G    ++     + EG   GSI+ TSS A   G      YS SK A++  A   
Sbjct: 110 FAVNTKGAFFTVQRLTPLIREG---GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVL 166
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A EL   GIRVN +SP        ++   K +           K + D+ +  + R+ + 
Sbjct: 167 AAELLPRGIRVNSVSPG------FIDTPTKGVAGITEAERAEFKTLGDNITPXK-RNGTA 219
Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           ++VA+A LFLA  EA F T   L +DGG
Sbjct: 220 DEVARAVLFLAF-EATFTTGAKLAVDGG 246

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
            +VN  G    ++     + EG   GSI+ TSS A   G      YS SK A++  A   
Sbjct: 109 FAVNTKGAFFTVQRLTPLIREG---GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVL 165
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A EL   GIRVN +SP        ++   K +           K + D+ +  + R+ + 
Sbjct: 166 AAELLPRGIRVNSVSPG------FIDTPTKGVAGITEAERAEFKTLGDNITPXK-RNGTA 218
Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           ++VA+A LFLA  EA F T   L +DGG
Sbjct: 219 DEVARAVLFLAF-EATFTTGAKLAVDGG 245

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 18/107 (16%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISP--HGVPSEMLVNAYRKYLGKADMKPEEVC 220
           Y+++KEA+ GL RS A EL    IRVN +SP    +P +M  +    Y  K         
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDYRRKVP------- 247
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
                    L  R++S E+V+   +FL S +A +IT   + +DGGY+
Sbjct: 248 ---------LYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG 124
           +I CDV  ++ +    R  V   G+LDI+ NNA           L +     L+SV ++G
Sbjct: 62  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQIN----LVSV-ISG 116
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST--ACELG 182
              G+ + +K    G   G II  SS A +M       Y  SK  I+G  RS   A  L 
Sbjct: 117 TYLGLDYMSKQ--NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 174
Query: 183 KHGIRVNCISPHGVPSEML 201
             G+R+N I P  V + +L
Sbjct: 175 NSGVRLNAICPGFVNTAIL 193

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           I  D+ +  ++      AV+  G LDI  +N+           +  E+   + S+N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD-VTEEEFDRVFSLNTRGQ 131
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKH 184
               + A + + EG   G I+ TSS+ +    +  H+ YS SK A+    R  + + G  
Sbjct: 132 FFVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            I VN ++P G  ++M       Y+        E  + +    S L  R+   +DVA   
Sbjct: 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH-RNGWPQDVANVV 247
Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FL S+E  ++    L +DGG
Sbjct: 248 GFLVSKEGEWVNGKVLTLDGG 268

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 37  FAENGAHIVIADILDEL-----GAALASTI-------GGRYIHCDVTKEEDVESAVRLAV 84
           FAE GA +V+ D+  +      G++ A  +       GG+ +  +    E  E  V+ A+
Sbjct: 29  FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV-ANYDSVEAGEKLVKTAL 87
Query: 85  SWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS 144
              G++D++ NNA           ++ ED   +  V+L G    +  AA    + Q  G 
Sbjct: 88  DTFGRIDVVVNNAGILRDRSFSR-ISDEDWDIIQRVHLRGSFQ-VTRAAWDHXKKQNYGR 145
Query: 145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG-------VP 197
           II T+S++ I G      YS +K  ++GLA +   E  K+ I  N I+P+        V 
Sbjct: 146 IIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRXTETVX 205
Query: 198 SEMLVNAYRKYLGKADMKPEEVCKMV 223
            E LV A         +KPE V  +V
Sbjct: 206 PEDLVEA---------LKPEYVAPLV 222

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 46  IADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXX 105
           + ++ DE+  A    I    +  DV+ E    +AVR  V   G LDI+  NA        
Sbjct: 65  VEEVADEIVGAGGQAIA---LEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAP 121
Query: 106 XXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-----SAAIMGGLAS 160
              L   +    ++VNL G    + H     ++ +  G+I+  SS     +    G  A 
Sbjct: 122 IDDLKPFEWDETIAVNLRGTFLTL-HLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY 180
Query: 161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC 220
            A   ++ AI+   +  A ELGKH IRVN + P  + + +  N   ++  +  +  E   
Sbjct: 181 TATKAAQVAIV---QQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPK 237
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             V     +  G+    EDVA+   FL SE A  +T   + IDGG
Sbjct: 238 GQV----PITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           K   + GA +V+ DI    G  + + +G   R+   DVT E  V SA+ LA +  G L I
Sbjct: 27  KRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVTDEAAVASALDLAETM-GTLRI 82
Query: 93  MFNNAXXXXXXXXXX---XLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-------GQRK 142
           + N A               ++   + ++ +NL G  + ++ AA+ + +        + +
Sbjct: 83  VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEER 142
Query: 143 GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV 202
           G II T+S AA  G +   AYS SK  ++G+    A +L  H IRV  I+P    + +L 
Sbjct: 143 GVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA 202
Query: 203 N---AYRKYLGKADMKPEEV 219
           +     R  LGK    P  +
Sbjct: 203 SLPEEARASLGKQVPHPSRL 222

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 37  FAENGAHI--VIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF 94
           +A N A    V+  I +  G ALA       +  DV KE +V +      +  G+L  + 
Sbjct: 56  YASNSAAADEVVRQIREAGGQALA-------VQADVAKEREVLAXFETVDAQLGRLSALV 108
Query: 95  NNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAK--AMIEGQRKGSIICTSSSA 152
           NNA           + +E ++    +N+ G     + A K  +   G   GSI+  SS+A
Sbjct: 109 NNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAA 168
Query: 153 AIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM-----LVNAYR 206
           A +G    +  Y+ +K AI       A E+   GIRVN + P  + +++     L N  R
Sbjct: 169 ARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDIHASGGLPNRAR 228
Query: 207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                 D+ P+   +           R+ +  +VA+A ++L  ++A + T   L + GG
Sbjct: 229 ------DVAPQVPXQ-----------RAGTAREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 142 QKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 201
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 202 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 247
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 248 SAQYITGSIIKVDGGLS 264

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 162 QKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 221
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 222 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 267
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 268 SAQYITGSIIKVDGGLS 284

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 40  NGAHIVIADILDELGAALASTIGGR--YIHCDVTKEEDVESAV---------RLAVSWKG 88
           +G  +VIAD+  E G ALA  +G R  ++  +VT E+ V +A+         R AV   G
Sbjct: 53  DGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHG 112
Query: 89  QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMI-----EGQRKG 143
              +                 +M      + + LNG  +  +  A ++      E   +G
Sbjct: 113 GFGV-----AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERG 167
Query: 144 SIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN 203
           +++ T+S A   G +   AY+ +K  +IGL  + A +L   GIRVN I+P  + + ++ +
Sbjct: 168 ALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES 227
Query: 204 AYRKYLGK 211
              + L K
Sbjct: 228 VGEEALAK 235

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           I  D+ +  ++      AV+  G LDI  +N+           +  E+   + S+N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD-VTEEEFDRVFSLNTRGQ 131
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKH 184
               + A + + EG   G I+ TSS+ +    +  H+ +S SK A+    R  + + G  
Sbjct: 132 FFVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDK 188
Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            I VN ++P G  ++M       Y+        E  + +    S L  R+   +DVA   
Sbjct: 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH-RNGWPQDVANVV 247
Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FL S+E  ++    L +DGG
Sbjct: 248 GFLVSKEGEWVNGKVLTLDGG 268

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 162 QKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 221
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 222 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 267
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 268 SAQYITGSIIKVDGGLS 284

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIIC 147
           G+LDI+ NNA            +  D    L VN+      I  AA  +      G+I+ 
Sbjct: 93  GRLDIVVNNAGVISRGRITETTDA-DWSLSLGVNVEAPFR-ICRAAIPLXAAAGGGAIVN 150
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
            +S   +  G     Y L+K A+  L +    +    GIR+N + P+ V +  L   + K
Sbjct: 151 VASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAK 210
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                D    E+ + V        GR A  ED+A   LFLAS+ A ++    + ++GG
Sbjct: 211 RGFDPDRAVAELGRTVP------LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 75  DVESAVRLAVSWKGQ---LDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKH 131
           D+ES        K +   +DI+ NNA            + ++ + +++ NL+ I    K 
Sbjct: 65  DIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXR-XSEDEWQSVINTNLSSIFRXSKE 123
Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
             +   + +R G II   S     G      Y  +K  +IG ++S A E+    I VN +
Sbjct: 124 CVRGXXK-KRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVV 182
Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  + ++             D   +E    +  +  +  G+    +D+A A  FLASEE
Sbjct: 183 APGFIATDX-----------TDKLTDEQKSFI--ATKIPSGQIGEPKDIAAAVAFLASEE 229
Query: 252 AGFITAHNLVIDGG 265
           A +IT   L ++GG
Sbjct: 230 AKYITGQTLHVNGG 243

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 42/267 (15%)
Query: 13  KRLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIADILDELGAA-----LASTIGGRYIH 67
           K L GK                ++FA +GA +V  D+    GAA     +A  +GG  + 
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD---GAAEDLKRVADKVGGTALT 265
Query: 68  CDVTKEEDVES-AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKF--LLSVNLNG 124
            DVT ++ V+     +     G++DI+ NNA            NM++ ++  +++VNL  
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLA---NMDEKRWDAVIAVNL-- 320
Query: 125 ILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
                  A + + EG          G +I  SS A I G      Y+ +K  +IGLA + 
Sbjct: 321 ------LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEAL 374
Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A  L   GI +N ++P  + ++M            +  P    ++ R   SL +G     
Sbjct: 375 APVLADKGITINAVAPGFIETKM-----------TEAIPLATREVGRRLNSLFQG--GQP 421
Query: 238 EDVAQAALFLASEEAGFITAHNLVIDG 264
            DVA+   + AS  +  +T + + + G
Sbjct: 422 VDVAELIAYFASPASNAVTGNTIRVCG 448

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 142 QKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 201
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 202 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 247
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 248 SAQYITGSIIKVDGGLS 264

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 162 QKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 221
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 222 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 267
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 268 SAQYITGSIIKVDGGLS 284

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 142 QKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 201
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 202 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 247
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 248 SAQYITGSIIKVDGGLS 264

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 25/269 (9%)
Query: 14  RLTGKXXXXXXXXXXXXXXXXKLFAENGAHIVIA----DILDELGAA-LASTIGGRYIHC 68
           R +GK                 +FA+ GA + I     D L+E     L + +    I+ 
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 69  ---DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXX-XXXXXLNMEDVKFLLSVNLNG 124
              DVT+    +  +   ++  G++DI+ NNA              +E  +    +N   
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA----YSLSKEAIIGLARSTACE 180
           ++   +   + +I  + KG I+  SS   I+ G  +H+    Y+ +K A+    R TA +
Sbjct: 143 VIEMTQKTKEHLI--KTKGEIVNVSS---IVAGPQAHSGYPYYACAKAALDQYTRCTAID 197
Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIED 239
           L +HG+RVN +SP  V +      +   +G  +   +++   +      +  G     E+
Sbjct: 198 LIQHGVRVNSVSPGAVAT-----GFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE 252
Query: 240 VAQAALFLASEE-AGFITAHNLVIDGGYT 267
           +A   +FLA    + +I   ++V DGG T
Sbjct: 253 IANIIVFLADRNLSSYIIGQSIVADGGST 281

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 140 QRKGSIICTSSSAAIMG---------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           Q+  +  CTSS+ +I+           +A   Y++ K A++GL +S A EL  +GIRVN 
Sbjct: 162 QKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNG 221
Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P GV            L    M  EE  K  R     L  R AS E +A A +FL S 
Sbjct: 222 VAP-GV-----------SLLPVAMGEEEKDKWRRKVP--LGRREASAEQIADAVIFLVSG 267
Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT   + +DGG +
Sbjct: 268 SAQYITGSIIKVDGGLS 284

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 41/212 (19%)
Query: 36  LFAENGAHIVIAD-----------------ILDELGAALASTIGGRYIHCDVTKEEDVES 78
           LFAE GA +V+ D                 ++DE+  A     GG  +  D     D   
Sbjct: 38  LFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA-----GGEAV-ADYNSVIDGAK 91
Query: 79  AVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIE 138
            +  A+   G++DI+ NNA            + +D   +  V+L G       AA   ++
Sbjct: 92  VIETAIKAFGRVDILVNNAGILRDRSLVKT-SEQDWNLVNDVHLKGSFK-CTQAAFPYMK 149
Query: 139 GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP----- 193
            Q  G II TSS++ I G      Y+ +K  +IGLA + A E  ++ +  N I P     
Sbjct: 150 KQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASR 209
Query: 194 --HGVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
              G+  ++L N         ++KP+ +  +V
Sbjct: 210 MTEGILPDILFN---------ELKPKLIAPVV 232

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILH 127
           CD++  + + +     ++  G+ D++ NNA           +   +   L++VNL     
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++  A AMI  +R G II  SS A         AY+ SK  + GL  S A EL +H +R
Sbjct: 145 LLRAFAPAMIAAKR-GHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203
Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
           V+ ++P  V +E  V    K      ++P+++  +V
Sbjct: 204 VSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVV 239

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 109 LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE 168
           L   D+ F L+VNL   +  ++ A   M+  ++ G ++   S   +       AY+ +K 
Sbjct: 128 LTPNDLAFQLAVNLGSTVDMLQSALPKMV-ARKWGRVVSIGSINQLRPKSVVTAYAATKA 186
Query: 169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
           A   L +S A +     + +N ++P  V ++   NA R+        PE   + VR    
Sbjct: 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR--NADRRA-----QDPEGWDEYVRTLNW 239
Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           +  GR+   E++  AALFLASE   F+T   + + GGY
Sbjct: 240 M--GRAGRPEEMVGAALFLASEACSFMTGETIFLTGGY 275

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL 229
           +IG+ R+ A EL  HG+ VN + P  + ++ + +   +   ++ +  EE  K +  +  +
Sbjct: 164 VIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM--ASRI 221
Query: 230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             GR    E++A    FLASE+A FIT   + +DGG
Sbjct: 222 PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 48  DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXX 107
           +I D  G ALA  +       DVT    V +  + AV   G++D++ NNA          
Sbjct: 47  EIRDAGGTALAQVL-------DVTDRHSVAAFAQAAVDTWGRIDVLVNNA-GVMPLSPLA 98
Query: 108 XLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK 167
            + +++ + ++ VN+ G+L GI  A   ++E QR G II   S  A+     +  Y  +K
Sbjct: 99  AVKVDEWERMIDVNIKGVLWGI-GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATK 157
Query: 168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEM--------LVNAYRKYLGKADMKPEEV 219
            A+  ++     E     IRV C++P  V SE+         + A   Y   A ++P ++
Sbjct: 158 FAVRAISDGLRQE--STNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIA-LQPADI 214
Query: 220 CKMVR 224
            + VR
Sbjct: 215 ARAVR 219

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 56  ALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDV 114
           ALA+ + G   +  DV +E D   AV       G+L  + NNA           L +E+ 
Sbjct: 44  ALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHE-LTLEEW 102
Query: 115 KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA 174
           + +L  NL G   GI+HA  A++  +  G+I+   S A         AY+ SK  ++GLA
Sbjct: 103 RLVLDTNLTGAFLGIRHAVPALLR-RGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLA 161
Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA-DMKPEEVCKMV 223
            +   +L +  +RV  + P  V +    N      G+A  +KPE+V + V
Sbjct: 162 GAAMLDLREANVRVVNVLPGSVDTGFAGNTP----GQAWKLKPEDVAQAV 207

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 68  CDVT-KEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
           CD++ + E  E    +A  + G+L+I+ NNA             +ED   ++S+N     
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD-YTVEDYSLIMSINFEAAY 122
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H +   A   ++   +G+++  SS +  +       Y  +K A+  L R  A E  K  I
Sbjct: 123 H-LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN + P GV +  LV      +   D + +E    + D  +L R      +++A    F
Sbjct: 182 RVNGVGP-GVIATSLVE-----MTIQDPEQKENLNKLIDRCALRR--MGEPKELAAMVAF 233
Query: 247 LASEEAGFITAHNLVIDGG 265
           L    A ++T   + +DGG
Sbjct: 234 LCFPAASYVTGQIIYVDGG 252

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 68  CDVT-KEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGIL 126
           CD++ + E  E    +A  + G+L+I+ NNA             +ED   ++S+N     
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD-YTVEDYSLIMSINFEAAY 123
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H +   A   ++   +G+++  SS +  +       Y  +K A+  L R  A E  K  I
Sbjct: 124 H-LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN + P GV +  LV      +   D + +E    + D  +L R      +++A    F
Sbjct: 183 RVNGVGP-GVIATSLVE-----MTIQDPEQKENLNKLIDRCALRR--MGEPKELAAMVAF 234
Query: 247 LASEEAGFITAHNLVIDGG 265
           L    A ++T   + +DGG
Sbjct: 235 LCFPAASYVTGQIIYVDGG 253

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 37  FAENGAHIVIADILDELGAALASTIGGR-Y----IHCDVTKEEDVESAVRLAVSWKGQLD 91
            A  GA +++ DI   L A    T+  + Y    +  DVT E  +E+A     +    +D
Sbjct: 29  LAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVD 88
Query: 92  IMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS 151
           I+ NNA           L +E+ + ++  NL       + AAK MI     G II   S 
Sbjct: 89  ILINNAGIQYRKPMVE-LELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147
Query: 152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK 211
            +         Y+ +K  I  L  S A E  +  I+ N I P  + ++M           
Sbjct: 148 TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM---------NT 198
Query: 212 ADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           A ++ ++    V+ S    R GR    E++   A+FL+S+ + +I    + +DGG+
Sbjct: 199 ALIEDKQFDSWVKSSTPSQRWGRP---EELIGTAIFLSSKASDYINGQIIYVDGGW 251

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISP--HGVPSEMLVNAYRKYLGKADMKPEEVC 220
           Y+++K A+ GL R+ A EL    IRVN ++P    +P  M      +Y  K  +   E  
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE-- 239
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
                         AS   +A A  FL S++AG+IT   L +DGG
Sbjct: 240 --------------ASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 19/241 (7%)
Query: 35  KLFAENGAHIVIADILDELGAALASTI--GGRYIH--CDVTKEEDVESAVRLAVSWKGQL 90
           ++ A  GA+IV+    D    ALA     G + +H   D++    +E+   LA    G +
Sbjct: 22  QVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
           DI+ NNA             +E    ++++NL+ + HG + A   M   +  G II  +S
Sbjct: 81  DILVNNA-GIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGM-RARNWGRIINIAS 138
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
              ++G     AY  +K  ++GL +    E     +  N I P  V + ++         
Sbjct: 139 VHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK------- 191
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASI-----EDVAQAALFLASEEAGFITAHNLVIDGG 265
           + D +       ++    LL  +  S+     E + +  LFL SE    +      +DGG
Sbjct: 192 QIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251
Query: 266 Y 266
           +
Sbjct: 252 W 252

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 40/261 (15%)
Query: 37  FAENGAHIVIADI----------------LDELGAALASTIGGRYI-HCDVTKEEDVESA 79
            AE GA I++ DI                L+E G  +  T    Y    DV     V   
Sbjct: 30  LAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89
Query: 80  VRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           +  AV+  G+LD++  NA               D      V+  G+++ +  A   +  G
Sbjct: 90  LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADA---FDVDFVGVINTVHAALPYLTSG 146
Query: 140 QRKGSIICTSSSAAIMGGLASHA-----------YSLSKEAIIGLARSTACELGKHGIRV 188
               SII T S A ++                  YS +K+ +       A +L    IR 
Sbjct: 147 ---ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRA 203
Query: 189 NCISPHGVPSEMLVNA--YRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE--DVAQAA 244
           N I P  V ++ML +A  YR++  + D++       +    ++    +  +E  D++ A 
Sbjct: 204 NVIHPTNVNTDMLNSAPMYRQF--RPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAV 261
Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FLAS+E+ ++T     +D G
Sbjct: 262 CFLASDESRYVTGLQFKVDAG 282

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 40  NGAHIVIADI----LDELGAALASTIGGRYI---HCDVTKEEDVESAVRLAVSWKGQLDI 92
            G  + IADI    +D+  A L +   G  +     DV   E  + A     +  G + I
Sbjct: 31  QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSI 90
Query: 93  MFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-----GQRKGSIIC 147
           + NNA            + +D  +LL VNL+G+++G+      M+E      Q+ G ++ 
Sbjct: 91  LCNNAGVNLFQPIEES-SYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVN 149
Query: 148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV-NAYR 206
           T+S AA +   +   Y+ +K A+ GL+ S    L K+ I V+ + P  V S +   +  R
Sbjct: 150 TASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIR 209
Query: 207 KYLGKADMKPEEVCKMVRDSG 227
               K ++KP +   + R +G
Sbjct: 210 PDALKGEVKPVDKTAVERLAG 230

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 48  DILDELGAALASTIGGRY------IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXX 101
           D+LD    A A  IGGR       + CDV   + V +      +   +LD++ NNA    
Sbjct: 68  DVLD----AAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNV 123
Query: 102 XXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAM-IEGQRKGSIICTSSSAAIMGGLAS 160
                  +  E    +++ NL G     +HA +    +  R G II   S +A      S
Sbjct: 124 PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNS 183
Query: 161 HAYSLSKEAIIGLARSTACELGKHGI 186
             Y+ +K AI GL +STA +   H I
Sbjct: 184 APYTATKHAITGLTKSTALDGRXHDI 209

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T EE  + A R+A  +  +LD + +NA            + +  + ++ VN+N     + 
Sbjct: 77  TAEECRQVADRIAAHYP-RLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATFM-LT 134
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A   ++     GS++ TSSS    G     AY+ SK A  G+ +  A E     +RVNC
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNC 194
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKPEEVCKMVRDS 226
           I+P G  + M  +A+     +K    AD+ P  +  M  DS
Sbjct: 195 INPGGTRTSMRASAFPTEDPQKLKTPADIMPLYLWLMGDDS 235

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVTKEEDVESAVRLAVSWKGQLDI 92
           +  A+ GA ++  D+    G   A+ +G   R+ + DVT E D  +A+  A    G +  
Sbjct: 25  RXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84
Query: 93  MFN---NAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-----RKGS 144
           + N    A             ++     ++VNL G  + I+ AA+   +G+      +G 
Sbjct: 85  LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNXIRLAAEVXSQGEPDADGERGV 144
Query: 145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           I+ T+S AA  G +   AY+ SK  +  L    A EL + GIRV  I+P
Sbjct: 145 IVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAP 193

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           +  DVT  + V +     V   G++D++FNNA           L     K ++  NL G 
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGP 138
Query: 126 LHGIKHAAKAM-IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
               + A +    +  R G II   S +A      S  Y+ +K AI GL +ST+ +   H
Sbjct: 139 FLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVH 198
Query: 185 GI 186
            I
Sbjct: 199 DI 200

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 88  GQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNG--ILHGIKHAAKAMIEGQRKGSI 145
           G+LD+  NNA           + +E+  +  ++N+N   +L   + AAK M E    G I
Sbjct: 81  GRLDVFVNNAASGVLRPV---MELEETHWDWTMNINAKALLFCAQEAAKLM-EKNGGGHI 136
Query: 146 ICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY 205
           +  SS  +I          +SK A+  L R  A EL    I VN +S   + ++    A 
Sbjct: 137 VSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTD----AL 192
Query: 206 RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           + +  + D+  +      R +     GR   I+D+     FL S +A  I    +++DGG
Sbjct: 193 KHFPNREDLLED-----ARQNTP--AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+ +K A+ GL R+ A EL    IRVN ++P G+   +L  A           P+E  + 
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAP-GL--SLLPPA----------XPQETQEE 228
Query: 223 VRDSGSLLRGRS-ASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            R    L  G+S AS   +A A  FL S++AG+IT   L +DGG
Sbjct: 229 YRRKVPL--GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T E   + A R+AV++  +LD + +NA            N +  + ++ VN+N     + 
Sbjct: 75  TSENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM-LT 132
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A   ++     GS++ TSSS    G     AY+ SK A  G+ +  A E  +  +RVNC
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNC 191
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKPEEVCKMVRDS 226
           I+P G  + M  +A+     +K    AD+ P  +  M  DS
Sbjct: 192 INPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDS 232

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL RS A EL    IRVN + P G+   +LV+         DM P  V + 
Sbjct: 197 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL--SVLVD---------DMPPA-VWEG 243
Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L + R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 244 HRSKVPLYQ-RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL RS A EL    IRVN + P G+   +LV+         DM P  V + 
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL--SVLVD---------DMPPA-VWEG 240
Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L + R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 241 HRSKVPLYQ-RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 284

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL RS A EL    IRVN + P G+   +LV+         DM P  V + 
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL--SVLVD---------DMPPA-VWEG 280
Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L + R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 281 HRSKVPLYQ-RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL RS A EL    IRVN + P G+   +LV+         DM P  V + 
Sbjct: 213 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL--SVLVD---------DMPPA-VWEG 259
Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L + R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 260 HRSKVPLYQ-RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 303

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T E+  + A R+AV++  +LD + +NA            + +  + ++ VN+N     + 
Sbjct: 77  TSEDCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFM-LT 134
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A   ++     GS++ TSSS    G     AY+ SK A  G+ +  A E  +  +RVNC
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNC 193
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKPEEVCKMVRDS 226
           I+P G  + M  +A+     +K    AD+ P  +  M  DS
Sbjct: 194 INPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDS 234

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------------- 156
            +++VN  G+   +   A+A+  GQ+  ++I  S +A   G                   
Sbjct: 81  LVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI 140
Query: 157 ------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
                 G    AY+ SK A+  LAR    +    G+R+N ++P  V + +L  +      
Sbjct: 141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS------ 194
Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           KAD +  E  +  R    L  GR +   +VA+A  FL   +A FI    L +DGG
Sbjct: 195 KADPRYGESTR--RFVAPL--GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGG 245

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL RS A EL    IRVN + P G+   +L          AD  P  V + 
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL--SVL----------ADDMPPAVRED 240
Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L + R +S  +V+   +FL S +A ++T   + +DGGY+
Sbjct: 241 YRSKVPLYQ-RDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYS 284

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 16/205 (7%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           I  D++ E       +       +LDI+ NNA             +   + ++ +N+  +
Sbjct: 82  IPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES-YPVSGWEKVMQLNVTSV 140
Query: 126 LHGIKHAAKAM---IEGQRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACEL 181
              I+     +      +    +I   S A I   G  ++AY  SK A+  L+R  A EL
Sbjct: 141 FSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
               I VN I+P   PS M      +++       E       DS S+  GR    E++A
Sbjct: 201 VGEHINVNVIAPGRFPSRMT-----RHIANDPQALEA------DSASIPMGRWGRPEEMA 249
Query: 242 QAALFLASEEAGFITAHNLVIDGGY 266
             A+ LA     ++T + + IDGG+
Sbjct: 250 ALAISLAGTAGAYMTGNVIPIDGGF 274

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           D++ E    S V  A    G LDI+   A           L  E  +   +VN+  +   
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A   + +G    SII TSS  A         Y+ +K AI+  +R  A ++ + GIRV
Sbjct: 168 TQEAIPLLPKG---ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV 224
Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + + + ++      G+   K  +  +           R+    ++A   ++LA
Sbjct: 225 NIVAPGPIWTALQISG-----GQTQDKIPQFGQQTP------MKRAGQPAELAPVYVYLA 273
Query: 249 SEEAGFITAHNLVIDGG 265
           S+E+ ++TA    + GG
Sbjct: 274 SQESSYVTAEVHGVCGG 290

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNN---AXXXXXXXXXXXLNMEDVKFLLSVNL 122
           + CDV+ +ED+++  +      G LDI+ ++   A            + E  K  + +++
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISV 135
Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
             ++  +      ++EG R G+I+  S   A       +   ++K A+    R  A ++ 
Sbjct: 136 YSLI-ALTRELLPLMEG-RNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIA 193
Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           KHG R+N IS   V +   + AY   +    +  E   K+         G+  +IEDV  
Sbjct: 194 KHGHRINAISAGPVKT---LAAYS--ITGFHLLMEHTTKVNP------FGKPITIEDVGD 242
Query: 243 AALFLASEEAGFITAHNLVIDGGY 266
            A+FL S+ A  IT   + +D GY
Sbjct: 243 TAVFLCSDWARAITGEVVHVDNGY 266

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T E   + A R+ V++  +LD + +NA            N +  + ++ +N+N     + 
Sbjct: 73  TSENCQQLAQRIVVNYP-RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFM-LT 130
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            A   ++     GS++ TSSS    G     AY+ SK A  G+ +  A E  +  +RVNC
Sbjct: 131 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNC 189
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKPEEVCKMVRDS 226
           I+P G  + M  +A+     +K    AD+ P  +  M  DS
Sbjct: 190 INPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDS 230

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 61/165 (36%), Gaps = 17/165 (10%)
Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGI 125
           I  D++   DV       V   G +D + NNA           L  ED  + ++ NL G 
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSD-LTEEDFDYTMNTNLKGT 121
Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
              +  A  A++E Q  G I   +S AA      S  Y +SK    GL  +      K  
Sbjct: 122 FF-LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180
Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKAD-------MKPEEVCKMV 223
           +R+  + P  V        Y    GK D       M PE++   V
Sbjct: 181 VRITDVQPGAV--------YTPMWGKVDDEMQALMMMPEDIAAPV 217

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 35  KLFAENGAHIVIAD--ILDELGAA--LASTIGGRYIHC--DVTKEEDVESAVRLAVSWKG 88
           ++F  +G H VIA   +   L AA  LA   G R +    DV     V +AV  A+   G
Sbjct: 45  EIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104
Query: 89  QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICT 148
           ++DI+ N A           L+    K ++ ++ +G  + +             G I+  
Sbjct: 105 RIDILINCAAGNFLCPAGA-LSFNAFKTVMDIDTSGTFN-VSRVLYEKFFRDHGGVIVNI 162
Query: 149 SSSAAIMG-GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK 207
           +++    G  L  HA S +K A+  + R  A E G   IRVN ++P  +         R+
Sbjct: 163 TATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISG---TEGLRR 218
Query: 208 YLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             G       +     + + S L+ R  +  ++A + L+LAS  A ++T   LV DGG
Sbjct: 219 LGG------PQASLSTKVTASPLQ-RLGNKTEIAHSVLYLASPLASYVTGAVLVADGG 269

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 21/244 (8%)
Query: 35  KLFAENGAHIVIADILDELGAALA----STIGGR--YIHCDVTKEEDVESAVRLAVSWKG 88
           +  A +G  I I  I D  G A      S +G R  ++  D+      ++ V   V+  G
Sbjct: 47  RALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106
Query: 89  QLDIMFNNA-XXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS--I 145
           ++D + NNA            L  E+   ++ VNL G +   +   KA +    + S  I
Sbjct: 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSI 166
Query: 146 ICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY 205
           I  +S +A+        Y  SK  +   ++  A  L + GI V  + P  + S+      
Sbjct: 167 INITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVS 226
Query: 206 RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
            KY G            + +SG +   R    ED+      LA  + GF T   +  DGG
Sbjct: 227 GKYDG------------LIESGLVPXRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274
Query: 266 YTTG 269
            + G
Sbjct: 275 LSIG 278

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 21/232 (9%)
Query: 50  LDELGAALASTIGGRYIHC---DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXX 106
           L+EL   +        +H    D+T+ E ++  +         +DI+ NNA         
Sbjct: 73  LEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRV 132
Query: 107 XXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS 166
             +  ED++ +   N+  +++ I  A   + + +  G I+   S A          Y  S
Sbjct: 133 GQIATEDIQDVFDTNVTALIN-ITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCAS 191
Query: 167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS 226
           K A+     S   EL    IRV  I+P  V +E  +  YR          E+   + +D+
Sbjct: 192 KFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-------NEEQAKNVYKDT 244
Query: 227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
             L+       +DVA   ++  S +   + A  L+    + T  +S   I++
Sbjct: 245 TPLM------ADDVADLIVYATSRKQNTVIADTLI----FPTNQASPHHIFR 286

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-GSLLRG 232
           +++ + E+   G+RV  +SP  + +E  V    +   +A    E   K++ D  G +  G
Sbjct: 164 SKAXSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLG 223
Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           R A  E+VA    FLAS+ A  IT     IDGG
Sbjct: 224 RPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHG 128
           + T ++  E A R+   + G+LD + +NA           L  ED   +  VN+N     
Sbjct: 75  NATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFX- 132
Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL-GKHGIR 187
           +  A   +++     SI  TSSS    G     AY +SK A  GL ++ A EL G   +R
Sbjct: 133 LTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVR 192
Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
            N I+P    +     AY       +  PE++  +
Sbjct: 193 ANSINPGATRTGXRAQAYPDENPLNNPAPEDIXPV 227

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARS 176
           +SVN       I+ A   +    R  S I   SSAA    L    AYS +K AI     +
Sbjct: 119 VSVNAKAPFFIIQQALSRL----RDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFT 174
Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A +LG  GI VN I P  V ++            A++  +   K    + S    R   
Sbjct: 175 LAKQLGARGITVNAILPGFVKTDX----------NAELLSDPXXKQYATTISAFN-RLGE 223
Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGG 265
           +ED+A  A FLAS ++ ++T   + + GG
Sbjct: 224 VEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGI 129
           ++++E VE  +    S  G +DI+ +N              +ED + ++   L      +
Sbjct: 54  MSEQEPVE-LIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEA-LQIKPFAL 111
Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
            +A  + ++ ++ G II  +S+A+         Y+ ++     LA + + ELG+H I V 
Sbjct: 112 ANAVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVF 171
Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I+P+GV S      Y     K    PE V   VR   +L   R  + +++ +   FLAS
Sbjct: 172 AIAPNGVDSGDSPYYYPSEPWKT--SPEHVA-WVRKYTAL--QRLGTQKELGELVTFLAS 226
Query: 250 EEAGFITAHNLVIDGGYT 267
               ++T     + GG+ 
Sbjct: 227 GSCDYLTGQVFWLAGGFP 244

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T E   + A R+AV++  +LD + +NA            N +  + +  VN+N      +
Sbjct: 75  TSENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATFXLTQ 133
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                +++    GS++ TSSS    G     AY+ SK A  G  +  A E  +  +RVNC
Sbjct: 134 ALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNC 191
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKP 216
           I+P G  + M  +A+     +K    AD+ P
Sbjct: 192 INPGGTRTAMRASAFPTEDPQKLKTPADIXP 222

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 66  IHCDVTKE-EDVESAVRLAVSWKG-QLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLN 123
           +  DVT E E +E+  RL    +G  +DI+ NNA           L   D + ++  NL 
Sbjct: 80  VAFDVTSESEIIEAFARL--DEQGIDVDILVNNAGIQFRKPMIE-LETADWQRVIDTNLT 136
Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
                 + AAK MI  +  G I+   S  + +       Y+++K  I  L R+ A E  +
Sbjct: 137 SAFMIGREAAKRMIP-RGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQ 195
Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           +GI+ N I P  + ++M          +A +   E    V+        R    +++   
Sbjct: 196 YGIQANAIGPGYMLTDM---------NQALIDNPEFDAWVK--ARTPAKRWGKPQELVGT 244
Query: 244 ALFLASEEAGFITAHNLVIDGG 265
           A+FL++  + ++    + +DGG
Sbjct: 245 AVFLSASASDYVNGQIIYVDGG 266

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           +GI      + + Q+ G I   +S AA  G      Y  +K A++GLA S   EL   GI
Sbjct: 122 YGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR 224
           RV  + P  V ++    A   +  +  ++P+++   +R
Sbjct: 182 RVTTLCPGWVNTDXAKKAGTPFKDEEXIQPDDLLNTIR 219

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 51  DELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLN 110
           DEL AA A       +  DV   + V++AV   V   G LDI+ NNA            +
Sbjct: 49  DELTAAGAKV---HVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDA-D 104
Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
             D   ++  NL G+++  + A   ++  + KG+++  SS A  +    +  Y  +K  +
Sbjct: 105 TTDWTRMIDTNLLGLMYMTRAALPHLL--RSKGTVVQMSSIAGRVNVRNAAVYQATKFGV 162
Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEM 200
              + +   E+ + G+RV  I P    +E+
Sbjct: 163 NAFSETLRQEVTERGVRVVVIEPGTTDTEL 192

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIK 130
           T EE  + A R+A  +  +LD + +NA            + +  + +  VN+N      +
Sbjct: 78  TAEECRQVADRIAAHYP-RLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATFXLTQ 136
Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                +++    GS++ TSSS    G     AY+ SK A  G  +  A E     +RVNC
Sbjct: 137 ALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNC 195
Query: 191 ISPHGVPSEMLVNAY-----RKYLGKADMKP 216
           I+P G  +    +A+     +K    AD+ P
Sbjct: 196 INPGGTRTSXRASAFPTEDPQKLKTPADIXP 226

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 12/201 (5%)
Query: 35  KLFAENGAHIVIADILDELGAALASTIGGRY----IHCDVTKEEDVESAVRLAVSWKGQL 90
           + FAE G  +V+    +E   ALA  +  +     +  DV       +AV         L
Sbjct: 39  RRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAXSAAVDNLPEEFATL 98
Query: 91  DIMFNNAXXXXXXXXXXXLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS 150
             + NNA            +++D    +  N+ G+L+  +     +I      SI+   S
Sbjct: 99  RGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158
Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY----- 205
            A       SH Y  +K  +   + +  C+L   G+RV  + P    SE  +  +     
Sbjct: 159 VAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA 218
Query: 206 ---RKYLGKADMKPEEVCKMV 223
              + Y G   ++PE++ + +
Sbjct: 219 RYDKTYAGAHPIQPEDIAETI 239

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK-PEEVC 220
           AY+ SK A+    R  A   G+ G+R+N I+P    + +L        G  D +  E + 
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL------QAGLQDPRYGESIA 207
Query: 221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           K V        GR A   ++A    FL S  A ++    +VIDGG
Sbjct: 208 KFVPP-----MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	278
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-113
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-100
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-93
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-91
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-90
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-90
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-89
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-89
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	9e-89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	9e-89
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-88
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-87
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-86
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-85
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	8e-85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-84
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	7e-84
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-83
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-83
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-83
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-82
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-82
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-81
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-81
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-80
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	8e-80
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	7e-78
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-77
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-77
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-77
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-76
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-76
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-76
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-75
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-74
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	7e-74
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	7e-74
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-73
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-73
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-73
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	9e-73
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	6e-72
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-71
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-71
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-71
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-71
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	9e-70
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-69
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	7e-69
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	8e-69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-68
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-68
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-68
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-68
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	9e-68
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-67
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-67
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-67
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	6e-67
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	6e-67
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-66
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-66
3imf_A	257	Short chain dehydrogenase; structural genomics, in	5e-66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-65
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-65
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-65
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-65
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-64
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-64
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-64
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-64
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-63
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-63
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-63
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-63
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	8e-63
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-62
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-61
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-60
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-60
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-60
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-60
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-60
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	8e-60
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	9e-60
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-59
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-59
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-59
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-59
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-59
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-59
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-58
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-58
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-58
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-58
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-58
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-58
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-58
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	7e-58
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	8e-58
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	9e-58
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-57
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-57
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	8e-57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-56
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-56
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-56
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	5e-56
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-56
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-55
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-55
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-55
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-55
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-54
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-54
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-54
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-53
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-53
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-52
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-52
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-52
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-51
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-51
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-51
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-51
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-51
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-51
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-51
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-51
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	5e-51
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-51
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-51
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-50
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-50
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-50
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	4e-50
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-49
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-49
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-49
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	9e-49
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-48
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-47
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	6e-47
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-46
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-45
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-44
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-42
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-38
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-42
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-42
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-41
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-41
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-40
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-39
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-39
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-38
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-35
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-32
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-30
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-25
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	9e-19
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	3e-17
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-17
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	7e-17
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-16
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-16
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-16
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-15
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	5e-14
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	7e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	8e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-12
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	8e-12
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	4e-10
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-06
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	8e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	4e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-04
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	7e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  327 bits (840), Expect = e-113
 Identities = 110/269 (40%), Positives = 158/269 (58%), Gaps = 15/269 (5%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYI 66
           S+ RL  KVA+ITGGA GIG  TAKLF   GA +VIADI D+ G  + + IG      ++
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV 69

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGI 125
           HCDVTK+EDV + V   ++  G+LDIMF N G+  +   SI     ED K ++ +N+ G 
Sbjct: 70  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA-SHAYSLSKEAIIGLARSTACELGKH 184
               KHAA+ MI   +KGSI+ T+S ++   G   SH Y+ +K A++GL  S   ELG++
Sbjct: 130 FLVAKHAARVMIP-AKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVNC+SP+ V S +L + +        +    V ++   + +L  G     EDVA A 
Sbjct: 189 GIRVNCVSPYIVASPLLTDVF-------GVDSSRVEELAHQAANLK-GTLLRAEDVADAV 240

Query: 245 LFLASEEAGFITAHNLVIDGGYTTGTSSM 273
            +LA +E+ +++  NLVIDGGYT    + 
Sbjct: 241 AYLAGDESKYVSGLNLVIDGGYTRTNPAF 269

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  292 bits (749), Expect = e-100
 Identities = 98/266 (36%), Positives = 140/266 (52%), Gaps = 22/266 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           S RLTGKVA+++GGARG+GA+  +     GA +V  DILDE G A+A+ +     Y+H D
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT+    ++AV  AV+  G L ++ NNAGI    G+I    + + + +L VNL G+  GI
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI-GTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +   K M E   +GSII  SS   + G +A H Y+ +K A+ GL +STA ELG  GIRVN
Sbjct: 121 RAVVKPMKE-AGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I P  V + M                               GR+A   +V+   ++LAS
Sbjct: 180 SIHPGLVKTPMT----DWVPEDIFQTAL--------------GRAAEPVEVSNLVVYLAS 221

Query: 250 EEAGFITAHNLVIDGGYTTGTSSMSF 275
           +E+ + T    V+DGG   G +   F
Sbjct: 222 DESSYSTGAEFVVDGGTVAGLAHNDF 247

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  275 bits (706), Expect = 1e-93
 Identities = 84/260 (32%), Positives = 124/260 (47%), Gaps = 15/260 (5%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           + RL GKVA++TGGA G+G    KL    GA +  +DI +  G  LA+ +G R  ++  D
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V+ E D    +       G L+++ NNAGI    G + +  +ED   LL +N   +  G 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG--IR 187
           +    AM E    GSII  +S ++ +       YS SK A+  L R+ A    K G  IR
Sbjct: 120 QQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN I P G+ + M+  +  K  G +        K+ R       GR+   E +AQ  LFL
Sbjct: 178 VNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNR------AGRAYMPERIAQLVLFL 229

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           AS+E+  ++   L  D    
Sbjct: 230 ASDESSVMSGSELHADNSIL 249

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  275 bits (707), Expect = 2e-93
 Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 10/269 (3%)

Query: 4   RDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG 63
                 ++   L GKVA++TG   GIG A A+  A+ G H++ ADI  +   A A+ IG 
Sbjct: 16  TQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC 75

Query: 64  R--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN 121
                  DV+ E+ + + V   V+  G +D +  NAG+     S+    +ED   ++++N
Sbjct: 76  GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHL-ASLIDTTVEDFDRVIAIN 134

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           L G     KHAA  MIE +  G+I+  SS A  +    + AY +SK  II L+R TA EL
Sbjct: 135 LRGAWLCTKHAAPRMIE-RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL 193

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
              GIR N + P  V + M   A   + G                   L+GR A+ E++A
Sbjct: 194 RSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR------LQGRMAAPEEMA 247

Query: 242 QAALFLASEEAGFITAHNLVIDGGYTTGT 270
              +FL S++A  IT    + DGG     
Sbjct: 248 GIVVFLLSDDASMITGTTQIADGGTIAAL 276

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  269 bits (690), Expect = 4e-91
 Identities = 91/268 (33%), Positives = 137/268 (51%), Gaps = 18/268 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
            L+GK  +ITGGARG+GA  A+     GA +V+AD+LDE GAA A  +G    Y H DVT
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            EED +  V  A    G +D + NNAGIS  G  + + ++E  + ++ +NL G+  G+K 
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKT 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
              AM +    GSI+  SS+A +MG   + +Y  SK  + GL++  A ELG   IRVN +
Sbjct: 121 VIPAMKD-AGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV 179

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALFLASE 250
            P    + M                    +    +  + R G      ++A A + L S+
Sbjct: 180 HPGMTYTPMTAET-----------GIRQGEGNYPNTPMGRVGNEP--GEIAGAVVKLLSD 226

Query: 251 EAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
            + ++T   L +DGG+TTG +    + Q
Sbjct: 227 TSSYVTGAELAVDGGWTTGPTVKYVMGQ 254

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  267 bits (686), Expect = 3e-90
 Identities = 83/266 (31%), Positives = 128/266 (48%), Gaps = 11/266 (4%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCD 69
           +  R  GKV V+TGG RGIGA   + F  +GA +VI D  +  G AL   + G  +I CD
Sbjct: 3   TGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCD 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT+E+DV++ V   +   G+LD + NNAG           + +  + LL +NL G     
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           K A   + +   +G++I  SS    +G   +  Y  +K A+  + ++ A +   +G+RVN
Sbjct: 123 KLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           CISP  + + +      + L      P    +    +  L  GR     +V  AA+FLAS
Sbjct: 181 CISPGNIWTPLW-----EELAALMPDPRASIREGMLAQPL--GRMGQPAEVGAAAVFLAS 233

Query: 250 EEAGFITAHNLVIDGGYTTGTSSMSF 275
            EA F T   L++ GG   G    + 
Sbjct: 234 -EANFCTGIELLVTGGAELGYGCKAS 258

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  267 bits (684), Expect = 5e-90
 Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 16/265 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           +  L  KVA+ITG   GIG  T+++ A  GA +V+AD+ +   A  A+++G    +   D
Sbjct: 6   TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVD 65

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG-SITSLNMEDVKFLLSVNLNGILHG 128
           +T E  V + +   +   G+LDI+ NNA  S      +T + ++      +VN  G +  
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K+A   +I     G+I+  SS+ A      S AY+ +K AI  L R  A + G+HG+R 
Sbjct: 126 CKYAIPRLIS-AGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P  V +  L              P+ +  +         GR     ++A+   FLA
Sbjct: 185 NAIAPGLVRTPRL----------EVGLPQPIVDIFATHHLA--GRIGEPHEIAELVCFLA 232

Query: 249 SEEAGFITAHNLVIDGGYTTGTSSM 273
           S+ A FIT   +  D G       +
Sbjct: 233 SDRAAFITGQVIAADSGLLAHLPGL 257

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  264 bits (677), Expect = 5e-89
 Identities = 84/255 (32%), Positives = 128/255 (50%), Gaps = 10/255 (3%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
               GK  ++TGGARGIG A A+ FA  GA + + D+    G  +A  IGG +   D+  
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIGGAFFQVDLED 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E +    V  A    G++D++ NNA I+  G S  ++ + + + +L VNL   +H    A
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAIAAPG-SALTVRLPEWRRVLEVNLTAPMHLSALA 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+ M +    G+I+  +S   +     + AY+ SK  ++ L RS A +L    IRVN ++
Sbjct: 120 AREMRK-VGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + +E +              PE   +   D  +L   R    E+VA+A LFLASE+A
Sbjct: 179 PGAIATEAV-----LEAIALSPDPERTRRDWEDLHAL--RRLGKPEEVAEAVLFLASEKA 231

Query: 253 GFITAHNLVIDGGYT 267
            FIT   L +DGG T
Sbjct: 232 SFITGAILPVDGGMT 246

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  264 bits (678), Expect = 5e-89
 Identities = 87/263 (33%), Positives = 136/263 (51%), Gaps = 11/263 (4%)

Query: 9   KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YI 66
              S  L  +V ++TGG  GIG ATA+LFA+NGA++V+AD+ ++    +A+ IG +   +
Sbjct: 19  YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGV 78

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+  +D ES V    +  G++D++ NNAG  G+ G++ ++  E    ++SVN+ GI 
Sbjct: 79  RVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIMSVNVKGIF 137

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              K+    M      GSII T+S  A        AY  SK AI  L R+ A +  K GI
Sbjct: 138 LCSKYVIPVMRR-NGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGI 196

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN ++P  + S          +      P ++         +   R  + E++A+A LF
Sbjct: 197 RVNAVAPGTIDSPYF-----TKIFAEAKDPAKLRSDFNARAVM--DRMGTAEEIAEAMLF 249

Query: 247 LASEEAGFITAHNLVIDGGYTTG 269
           LAS+ + F T   L +DGG + G
Sbjct: 250 LASDRSRFATGSILTVDGGSSIG 272

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  264 bits (676), Expect = 9e-89
 Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
           +  T KVA++TGG+ GIG A        GA +V   + ++    ++      +   DVT 
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS-----DHFKIDVTN 64

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           EE+V+ AV       G++DI+ NNAGI      +     E  + ++ VN+NG     K+ 
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQY-SPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              M+     GSII  +S  +      + AY  SK A++GL RS A +     IR N + 
Sbjct: 124 IPVMLA-IGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVC 181

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + + M++ A +  +G+ +   E   +       +  GR    E+VA+   FLAS+ +
Sbjct: 182 PGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM--GRIGRPEEVAEVVAFLASDRS 239

Query: 253 GFITAHNLVIDGGYTTGTS 271
            FIT   L +DGG  +   
Sbjct: 240 SFITGACLTVDGGLLSKLP 258

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  264 bits (677), Expect = 9e-89
 Identities = 95/272 (34%), Positives = 130/272 (47%), Gaps = 16/272 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIH 67
            RL GK+A++TG + GIG A A LFA  GA +V+        A L   I   GG    + 
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV  E   E+ V LAV   G LD  FNNAG  G+ G I+SL++E  +  L  NL     
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGI 186
             K+   A+      GS+  TSS      G A    Y+ SK  +IGL ++ A ELG  GI
Sbjct: 124 AAKYQVPAIAA-LGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN + P G  +                   E    V    +L   R A  E++A+AAL+
Sbjct: 183 RVNALLPGGTDTPAN-------FANLPGAAPETRGFVEGLHAL--KRIARPEEIAEAALY 233

Query: 247 LASEEAGFITAHNLVIDGGYTTGTSSMSFIYQ 278
           LAS+ A F+T   L+ DGG +   ++ +  +Q
Sbjct: 234 LASDGASFVTGAALLADGGASVTKAAENLYFQ 265

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  263 bits (675), Expect = 1e-88
 Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 13/270 (4%)

Query: 7   TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-- 64
                + R T +V +ITGG  G+G ATA   A  GA + + D+  E   A  + +     
Sbjct: 3   ATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP 62

Query: 65  -----YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
                    DV+ E  VE+ V       G++D  FNNAGI G      S    +   ++S
Sbjct: 63  DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS 122

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTAC 179
           +NL G+  G++   K M E Q  G ++ T+S   I G      Y+ +K  ++GL R++A 
Sbjct: 123 INLRGVFLGLEKVLKIMRE-QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAV 181

Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           E G++GIR+N I+P  + + M+ N+ +         P +  +           R     +
Sbjct: 182 EYGRYGIRINAIAPGAIWTPMVENSMK---QLDPENPRKAAEEFIQVNPS--KRYGEAPE 236

Query: 240 VAQAALFLASEEAGFITAHNLVIDGGYTTG 269
           +A    FL S++A ++ A  + IDGG +  
Sbjct: 237 IAAVVAFLLSDDASYVNATVVPIDGGQSAA 266

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  258 bits (662), Expect = 6e-87
 Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--Y 65
           S + L  KV ++TG   GIG A AK FA N + +V  ++L++    +   +   G     
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DV+K++DVE  VR       ++D++ NNAGI      +  ++ E  + +L+VNL   
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSA 120

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            +  +     M++ Q KG I+ T+S A I GG A   Y+++K  +IGL RS A   G  G
Sbjct: 121 FYSSRAVIPIMLK-QGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQG 179

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IR   + P  V + + + +       +      +  + +        R A  ED+A   +
Sbjct: 180 IRAVAVLPGTVKTNIGLGS-------SKPSELGMRTLTKLMSLS--SRLAEPEDIANVIV 230

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FLAS+EA F+    +V+DGG T
Sbjct: 231 FLASDEASFVNGDAVVVDGGLT 252

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  258 bits (663), Expect = 8e-87
 Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 14/265 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
            L GKVA+ITG   G G   AK FA+ GA +VI D        +A  IG     +  D++
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS 65

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           KE DV++AV  A+S  G++DI+ NNAGI     +   +  E+   ++ VN+ G+      
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSK 125

Query: 132 AAKAMIE---GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
                 E     ++  I+  +S+ A         Y+ +K  ++ + ++ A EL    IRV
Sbjct: 126 LIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRV 185

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
             ++P    + +L      ++G+     EE+ K  RDS  +  GR    +D+A+AA FL 
Sbjct: 186 VALNPVAGETPLL----TTFMGE---DSEEIRKKFRDSIPM--GRLLKPDDLAEAAAFLC 236

Query: 249 SEEAGFITAHNLVIDGGYTTGTSSM 273
           S +A  IT   L +DGG + G  S+
Sbjct: 237 SPQASMITGVALDVDGGRSIGGRSI 261

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  257 bits (658), Expect = 4e-86
 Identities = 87/257 (33%), Positives = 129/257 (50%), Gaps = 5/257 (1%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDV 70
           KRL GK A+ITG ARGIG A A+ +   GA + IADI  E     A+ IG     +  DV
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV 63

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T+++ +++A+   V   G LDI+ NNA +      I  +  E  + L ++N+ G L  ++
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFDLA-PIVEITRESYEKLFAINVAGTLFTLQ 122

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            AA+ MI   R G II  +S A   G      Y  +K A+I L +S   +L KH I VN 
Sbjct: 123 AAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNA 182

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           I+P  V  E        +    +    E  ++V ++     GR  + ED+   A+FLAS 
Sbjct: 183 IAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF--GRMGTAEDLTGMAIFLASA 240

Query: 251 EAGFITAHNLVIDGGYT 267
           E+ +I +    +DGG  
Sbjct: 241 ESDYIVSQTYNVDGGNW 257

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  256 bits (656), Expect = 5e-86
 Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 19/262 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYIH 67
           S RL GKVA+ITGG  GIG A A  F E GA ++I     ++G   A ++G     ++  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D + E+             G +  + NNAGI+    S+      + + LL+VNL+G+  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KHG 185
           G +   + M       SII  SS    +G  +  AY+ SK A+  +++S A +     + 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN + P  + + ++           D+   E     R    +  G      D+A   +
Sbjct: 180 VRVNTVHPGYIKTPLV----------DDLPGAEEAMSQRTKTPM--GHIGEPNDIAYICV 227

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS E+ F T    V+DGGYT
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  256 bits (656), Expect = 1e-85
 Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 23/279 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----------------- 54
           + R+ GKVA +TG ARG G + A   A+ GA I+  DI   +                  
Sbjct: 6   TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLA 65

Query: 55  --AALASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN 110
             A L      R      DV   + +++AV   V   G+LDI+  NAGI   G ++   +
Sbjct: 66  ETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTS 125

Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI 170
            ED   ++ +NL G+   +K     MI G R GSII TSS   +     +  Y  +K  +
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185

Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSGS 228
           +GL R+   ELG+H IRVN + P  V + ML N   ++ +    +    +    +     
Sbjct: 186 VGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH 245

Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            L        D++ A LF AS+EA +IT   L ID G  
Sbjct: 246 TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  253 bits (649), Expect = 8e-85
 Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YI 66
           SK+  GKV ++TG    IG ATA   AE G  I + D+  E      +++   G      
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSY 61

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            CDVT EE V   V   V   G++D +FNNAG  G+   +     +D   +L++N+ G  
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 121

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H +K  ++ MI  Q  G I+ T+S A + G     AY  SK AII L  + A +L  + I
Sbjct: 122 HVLKAVSRQMIT-QNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKA-----DMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
           RVN ISP  +    +     +   K         P+ V + +  S  +   R   I ++ 
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--RRYGDINEIP 238

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
               FL  +++ F+T  NL I GG
Sbjct: 239 GVVAFLLGDDSSFMTGVNLPIAGG 262

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  254 bits (650), Expect = 1e-84
 Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 12/261 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
                VA+ITG   GIG ATA   A +G  +            +A  I   GG+   +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV+ E  + +AVR  V   G LDI+  NAGI+G    I  L   +    ++VNL G    
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAI--MGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           +      + + +  G+I+  SS           + AY+ +K A + + +  A ELGKH I
Sbjct: 145 LHLTVPYLKQ-RGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN + P  + + +          + + +     +  +    +  G+    EDVA+   F
Sbjct: 204 RVNAVCPGAIETNIS----DNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF 259

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L SE A  +T   + IDGG  
Sbjct: 260 LVSERARHVTGSPVWIDGGQG 280

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  251 bits (643), Expect = 7e-84
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
             L  KV ++TG + GIG A A+ F + G+ ++   I D   A         +I CDVT 
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD------HIECDVTN 57

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            + V++++       G + ++ NNAGI    G I S++M + + ++ VNL G  +  K A
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIESY-GKIESMSMGEWRRIIDVNLFGYYYASKFA 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              MI   R  SI+  SS  A +    + AY  SK A+IGL +S A +     +R N + 
Sbjct: 117 IPYMIR-SRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVC 174

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + + ++  A    +G   M+ E+          +   R    ++VA A  FLAS EA
Sbjct: 175 PATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM--QRIGKPQEVASAVAFLASREA 232

Query: 253 GFITAHNLVIDGGYT 267
            FIT   L +DGG +
Sbjct: 233 SFITGTCLYVDGGLS 247

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  250 bits (640), Expect = 1e-83
 Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 14/258 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
            RL GKV ++T  A+GIG A A  FA  GA ++  DI +     L    G +    DVTK
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           ++ ++           +LD++FN AG     G++     +D  F +++N+  +   IK  
Sbjct: 62  KKQIDQFANEV----ERLDVLFNVAGFVHH-GTVLDCEEKDWDFSMNLNVRSMYLMIKAF 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNCI 191
              M+  Q+ G+II  SS A+ + G+ +   YS +K A+IGL +S A +  + GIR NC+
Sbjct: 117 LPKMLA-QKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCV 175

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
            P  V +  L     +   +A   PEE             GR A+ E++A   ++LAS+E
Sbjct: 176 CPGTVDTPSL-----QERIQARGNPEEARNDFLKRQKT--GRFATAEEIAMLCVYLASDE 228

Query: 252 AGFITAHNLVIDGGYTTG 269
           + ++T + ++IDGG++ G
Sbjct: 229 SAYVTGNPVIIDGGWSLG 246

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  248 bits (635), Expect = 6e-83
 Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 14/254 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTIGGRYIHCDVTKE 73
                 ++TGG++GIG A  +L  +N  H VI  DI     A        ++I  D+TK+
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL-----KFIKADLTKQ 56

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           +D+ + + +        D +F NAGI   G SI  +++E +K +L +N+   ++ IK   
Sbjct: 57  QDITNVLDIIK--NVSFDGIFLNAGILIKG-SIFDIDIESIKKVLDLNVWSSIYFIKGLE 113

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
             +   +   SI+   S    +    S AY+LSK AI  + +S A +L K+ IRVN + P
Sbjct: 114 NNL---KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCP 170

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             V +++  N  +KY     +  +E  K       L   R A  +++A+  +FL S+++ 
Sbjct: 171 GTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL--NRIAQPQEIAELVIFLLSDKSK 228

Query: 254 FITAHNLVIDGGYT 267
           F+T   + IDGGYT
Sbjct: 229 FMTGGLIPIDGGYT 242

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  249 bits (638), Expect = 6e-83
 Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 22/274 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----------AALASTI 61
           + +L G+VA ITG ARG G A A   A  GA I+  DI  +L             L+ T+
Sbjct: 6   AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65

Query: 62  ------GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMED 113
                   R      D    + +   V   V+  G+LDI+  NAG+  +  +   +  ED
Sbjct: 66  RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV-AAPQAWDDITPED 124

Query: 114 VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
            + ++ +N+ G  + +   A  +IEG R GSII  SS+A +        Y+ SK A+ GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
           AR+ A ELGKH IRVN + P  V + M        +G+A     ++  ++      L   
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLT---PFLPDW 241

Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            A  ED+A    +LAS+E+  +TA  + +D G T
Sbjct: 242 VAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  250 bits (640), Expect = 6e-83
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 19/275 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---------AALASTI- 61
           + ++ GKVA ITG ARG G + A   A  GA I+  D+  +L            LA T+ 
Sbjct: 23  AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82

Query: 62  -----GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV 114
                G R      DV   + +++AV   V+  G+LDI+  NA ++  G  +  ++ +  
Sbjct: 83  QVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTW 142

Query: 115 KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA 174
           + ++ VNLNG     + A   ++ G+R GSI+ TSS   + G      Y  SK  + GL 
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLM 202

Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSGSLLRG 232
           R+ A ELG   IRVN + P  V + ML+N   YR +    +    E  ++      +L  
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI 262

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
                 D++ A LFL S++A +IT  +L +DGG  
Sbjct: 263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  248 bits (636), Expect = 1e-82
 Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 12/258 (4%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           ++RL  K+AVITG   GIG A AK F   GA + I     ++  A  + IGG    I  D
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD 83

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
                +++       +  G++D++F NAG  GS   +  +  E        N+ G+L  +
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           + A   +  G    S++ T S+A   G  A   Y+ SK A+   AR+   +L   GIR+N
Sbjct: 143 QKALPLLARG---SSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRIN 199

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            +SP    +  L     +  GK  ++ + +   +     +  GR    E+VA AALFLAS
Sbjct: 200 TLSPGPTETTGL----VELAGKDPVQQQGLLNALAAQVPM--GRVGRAEEVAAAALFLAS 253

Query: 250 EEAGFITAHNLVIDGGYT 267
           +++ F+T   L +DGG  
Sbjct: 254 DDSSFVTGAELFVDGGSA 271

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  246 bits (631), Expect = 3e-82
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 20/259 (7%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGR--YIHCDV 70
            +VA++TG + G G A A  F   G  +   D+  E     A T       +   +  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGILHG 128
             E DV +A+   +   G +D++ NNAGI+G+   G + +  +E    +++VN+ GI  G
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +     M+  Q  G I+  +S A+++      AY+ SK A++ L +S A +    GIR 
Sbjct: 122 CRAVLPHMLL-QGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  + + M          +  +   E+   V            +   VA A +FLA
Sbjct: 181 NAVCPGMIETPMT---------QWRLDQPELRDQVLARIPQ--KEIGTAAQVADAVMFLA 229

Query: 249 SEEAGFITAHNLVIDGGYT 267
            E+A ++    LV+DG YT
Sbjct: 230 GEDATYVNGAALVMDGAYT 248

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  245 bits (627), Expect = 2e-81
 Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 9/259 (3%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YI 66
              LT KV VI+G    +G   A+  AE GA +V+A    E    +A  +   G R   +
Sbjct: 6   GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSV 65

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             D+T +  V   V   +   G++D++ NNA    S     +   E ++  + + + G L
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL 125

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             I+    A+   + KG+++  +S           AY ++K A++ ++++ A ELG+ GI
Sbjct: 126 RLIQGFTPALE--ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN + P  +    L + +    GK     E++         L   R  + ++VA A LF
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL--KRLPTEDEVASAILF 241

Query: 247 LASEEAGFITAHNLVIDGG 265
           +AS+ A  IT   L ++ G
Sbjct: 242 MASDLASGITGQALDVNCG 260

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  245 bits (628), Expect = 3e-81
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 20/264 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-------- 63
                 +  ++TGG  GIG   A      GA ++I     +  A     +          
Sbjct: 6   QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAI 65

Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
           RY   D+T E++   AV    +W G+L  + + AG S + G IT ++ E  +  + +N+N
Sbjct: 66  RYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVN 125

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G ++ +KHAA+ M+     GS +  SS AA        AY ++K A+  L +  A ELG 
Sbjct: 126 GTMYVLKHAAREMVR-GGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGA 184

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             +RVN I P  + ++++          A  +  E+         L   R   +EDVA  
Sbjct: 185 SWVRVNSIRPGLIRTDLV---------AAITESAELSSDYAMCTPL--PRQGEVEDVANM 233

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A+FL S+ A F+T   + +DGG  
Sbjct: 234 AMFLLSDAASFVTGQVINVDGGQM 257

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  242 bits (620), Expect = 3e-80
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 13/261 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
           +LTG+VA+ITGGA G+G A    F   GA + + D   E    L    GG    +  DV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF----LLSVNLNGILH 127
             +D + A    ++  G++D +  NAGI     ++  L  + +      +  VN+ G +H
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIH 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            +K    A++    +GS++ T S+A          Y+ +K A++GL R  A EL  H +R
Sbjct: 122 AVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VR 178

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN ++P G+ +++   +      ++         +      L  GR  ++E+   A +F 
Sbjct: 179 VNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS---VLPIGRMPALEEYTGAYVFF 235

Query: 248 ASEEA-GFITAHNLVIDGGYT 267
           A+       T   L  DGG  
Sbjct: 236 ATRGDSLPATGALLNYDGGMG 256

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  241 bits (618), Expect = 8e-80
 Identities = 75/273 (27%), Positives = 112/273 (41%), Gaps = 23/273 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG----------------AAL 57
            L G+VA ITG ARG G + A   A  GA I+  DI   +                 A L
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 58  ASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
               G +      DV  +  +   V   +   G+LD++  NAG+  S G +  L  E   
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWD 130

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
            ++ VNL G    ++    AMIE    GSI+  SSSA +     +  YS SK  +  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           + A ELG++GIRVN I P+ V + M+                           +      
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAM----MEIFARHPSFVHSFPPMPVQPNGFM 246

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
           + ++VA    +LA + +G +T   + +D G   
Sbjct: 247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  236 bits (605), Expect = 7e-78
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---------------AAL 57
            R+  KV ++TGGARG G + A   AE GA I++ DI  ++                   
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 58  ASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
               G +      DV     V   +  AV+  G+LD++  NAGI   G  +    ++   
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLP---VQAFA 122

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-----------AYS 164
               V+  G+++ +  A   +  G    SII T S A ++                  YS
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSG---ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYS 179

Query: 165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR 224
            +K+ +       A +L    IR N I P  V ++ML +A      + D++       + 
Sbjct: 180 YAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL 239

Query: 225 DSGSL--LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              ++  +        D++ A  FLAS+E+ ++T     +D G  
Sbjct: 240 AFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  235 bits (602), Expect = 1e-77
 Identities = 71/269 (26%), Positives = 113/269 (42%), Gaps = 17/269 (6%)

Query: 1   MEARDDTNKLSS-KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALA 58
           ++   +     S +   GKVA++TG A GIG A        GA + +AD  +  + A L 
Sbjct: 11  VDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH 70

Query: 59  STIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLL 118
                  +  D+ +    +       +  G+LDI+ NNAG+   G  IT     D    L
Sbjct: 71  -------LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG-RITETTDADWSLSL 122

Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA 178
            VN+       + A   M      G+I+  +S   +  G     Y L+K A+  L +   
Sbjct: 123 GVNVEAPFRICRAAIPLMAA-AGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMG 181

Query: 179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE 238
            +    GIR+N + P+ V + ML    R    K    P+     +  +  L  GR A  E
Sbjct: 182 MDHAPQGIRINAVCPNEVNTPML----RTGFAKRGFDPDRAVAELGRTVPL--GRIAEPE 235

Query: 239 DVAQAALFLASEEAGFITAHNLVIDGGYT 267
           D+A   LFLAS+ A ++    + ++GG  
Sbjct: 236 DIADVVLFLASDAARYLCGSLVEVNGGKA 264

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  235 bits (603), Expect = 1e-77
 Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 33/278 (11%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---------AALASTI--- 61
            LTGKVA ITG ARG G A A   A +GA I+  D+ D++            LA+T+   
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 62  ---GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF 116
              G R      DV   E + +A++  +   G+LDI+  NAG       I  ++  D  +
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG-------IAPMSAGDDGW 122

Query: 117 --LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH----AYSLSKEAI 170
             ++ VNL G+ H IK A   +++    GSI+  SSSA + G  ++      Y  +K  +
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182

Query: 171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           +GL R  A  L    IRVN I P GV + M+ N + +          +    +   G+ +
Sbjct: 183 VGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM---GNAM 239

Query: 231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
                + EDVA A  +L S++A +IT   L +D G+  
Sbjct: 240 PVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  235 bits (602), Expect = 2e-77
 Identities = 80/272 (29%), Positives = 118/272 (43%), Gaps = 27/272 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--------R 64
            R   KVA+ITG + GIG ATA LFA  GA + I     E        I           
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGS---ITSLNMEDVKFLLSVN 121
            +  DVT +   +  +   +   G+LDI+ NNAG +         T+ ++E     L++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACE 180
           L  ++   K A   +     KG I+  SS A+ +        YS++K AI    R+TA +
Sbjct: 122 LRSVIALTKKAVPHLS--STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAID 179

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR----GRSAS 236
           L +HGIRVN ISP  V +               M  E   K      ++      G    
Sbjct: 180 LIQHGIRVNSISPGLVATGF--------GSAMGMPEETSKKFYSTMATMKECVPAGVMGQ 231

Query: 237 IEDVAQAALFLASEE-AGFITAHNLVIDGGYT 267
            +D+A+   FLA  + + +I  H LV+DGG +
Sbjct: 232 PQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 263

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  233 bits (597), Expect = 6e-77
 Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 19/265 (7%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR-- 64
           +   RL  +VA++TGGA+ IG A     AE GA ++IAD+ + +       +   G    
Sbjct: 6   MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVS 65

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DVT  E V++AVR     +G++DI+   AGI  S      +        + +NLNG
Sbjct: 66  SVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELG 182
           +    +   + M+E Q++G I+   S + ++        AY+ SK  +    RS A E  
Sbjct: 126 MFRSCQAVGRIMLE-QKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
            HGIR N ++P  + + +          +  M+  E+         +  GR    ++VA 
Sbjct: 185 PHGIRANAVAPTYIETTLT---------RFGMEKPELYDAWIAGTPM--GRVGQPDEVAS 233

Query: 243 AALFLASEEAGFITAHNLVIDGGYT 267
              FLAS+ A  +T   + +D G+T
Sbjct: 234 VVQFLASDAASLMTGAIVNVDAGFT 258

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  232 bits (594), Expect = 2e-76
 Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 9/256 (3%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVT 71
            L+G+ A++TGG++GIGAA A+   + GA + IAD+      A+ + +   G  +  DVT
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVT 68

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           K   V++A++ A+   G  D++  NAG+S        +  E+  F   VN  G+    + 
Sbjct: 69  KRASVDAAMQKAIDALGGFDLLCANAGVSTMR-PAVDITDEEWDFNFDVNARGVFLANQI 127

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           A +  +    KG I+ T+S AA +G   LA   YS SK A+ G  ++ A E+    IRVN
Sbjct: 128 ACRHFLASNTKGVIVNTASLAAKVGAPLLA--HYSASKFAVFGWTQALAREMAPKNIRVN 185

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           C+ P  V + M             M PE V         L  GR    EDVA   +FLAS
Sbjct: 186 CVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL--GRIEEPEDVADVVVFLAS 243

Query: 250 EEAGFITAHNLVIDGG 265
           + A F+T   + + GG
Sbjct: 244 DAARFMTGQGINVTGG 259

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  231 bits (592), Expect = 3e-76
 Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 24/261 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
           RL GK A+ITG   GIG   A  FA  GA +V++DI  +    +   I   GG+     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM--EDVKFLLSVNLNGIL 126
           D+T E+++ +    A+S  G++DI+ NNAG  G        +M   D +    +N+    
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPK----PFDMPMADFRRAYELNVFSFF 123

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           H  +  A  M +    G I+  +S AA    +   +Y+ SK A   L R+ A +LG+  I
Sbjct: 124 HLSQLVAPEMEK-NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I+P  + ++ L            +   E+ + +     +   R    +D+A AALF
Sbjct: 183 RVNGIAPGAILTDAL----------KSVITPEIEQKMLQHTPI--RRLGQPQDIANAALF 230

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L S  A +++   L + GG  
Sbjct: 231 LCSPAASWVSGQILTVSGGGV 251

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  231 bits (592), Expect = 4e-76
 Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 17/263 (6%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--Y 65
             K L  KVA++T    GIG A A+  A++GAH+V++    E      +T+   G     
Sbjct: 8   RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG 67

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
             C V K ED E  V +AV+  G +DI+ +NA ++   G+I     E    +L VN+   
Sbjct: 68  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 127

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
           +   K     M + +  GS++  SS  A         Y++SK A++GL ++ A EL    
Sbjct: 128 VLMTKAVVPEMEK-RGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRN 186

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVNC++P  + +            +     +   + +++S  +   R  + ED A    
Sbjct: 187 IRVNCLAPGLIKTNFS---------QVLWMDKARKEYMKESLRI--RRLGNPEDCAGIVS 235

Query: 246 FLASEEAGFITAHNLVIDGGYTT 268
           FL SE+A +IT   +V+ GG  +
Sbjct: 236 FLCSEDASYITGETVVVGGGTAS 258

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  229 bits (587), Expect = 1e-75
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YI 66
           S R   KV ++TG   GIG A A+  A  GA +V+ADI  E   A+A  I   GG    +
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISV 63

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG--GSITSLNMEDVKFLLSVNLNG 124
             DV+  E  ++     ++  G +D + NNA I G      + +++ E  K  +SVNL+G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
            L   +   K M + +  G+I+  SS+AA +    S+ Y L+K  I GL +  + ELG  
Sbjct: 124 ALWCTRAVYKKMTK-RGGGAIVNQSSTAAWLY---SNYYGLAKVGINGLTQQLSRELGGR 179

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            IR+N I+P  + +E                P+E+   +     L   R  + +D+    
Sbjct: 180 NIRINAIAPGPIDTEAN----------RTTTPKEMVDDIVKGLPL--SRMGTPDDLVGMC 227

Query: 245 LFLASEEAGFITAHNLVIDGGYT 267
           LFL S+EA +IT     +DGG  
Sbjct: 228 LFLLSDEASWITGQIFNVDGGQI 250

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  227 bits (582), Expect = 1e-74
 Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 12/257 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCDVTK 72
           KVA++TG  +GIG A A    ++G  + IAD  D    A+AS I   GG    +  DV+ 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            + V +AV  A    G  D++ NNAG++ S   I S+  E V  + ++N+ G++ GI+ A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 133 AKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
            +A  +    G II   S A  +G   LA   YS SK A+ GL ++ A +L   GI VN 
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELA--VYSSSKFAVRGLTQTAARDLAPLGITVNG 179

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
             P  V + M     R+    A               +L  GR +  EDVA    +LAS 
Sbjct: 180 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL--GRLSEPEDVAACVSYLASP 237

Query: 251 EAGFITAHNLVIDGGYT 267
           ++ ++T  +L+IDGG  
Sbjct: 238 DSDYMTGQSLLIDGGMV 254

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  225 bits (576), Expect = 7e-74
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 14/265 (5%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIH 67
           +      GK A++ GG  G+G AT +   E GA +++    +   A +    G R   + 
Sbjct: 1   MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALR 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D+    ++      A    G +D++  NAG+         ++        +VN  G   
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGV-SELEPFDQVSEASYDRQFAVNTKGAFF 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++     +   +  GSI+ TSS A   G      YS SK A++  A   A EL   GIR
Sbjct: 120 TVQRLTPLI---REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +SP  + +           G  + +  E   +  +   +   R+ + ++VA+A LFL
Sbjct: 177 VNSVSPGFIDTPTK-----GVAGITEAERAEFKTLGDNITPM--KRNGTADEVARAVLFL 229

Query: 248 ASEEAGFITAHNLVIDGGYTTGTSS 272
           A  EA F T   L +DGG     S+
Sbjct: 230 AF-EATFTTGAKLAVDGGLGQKLST 253

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  227 bits (581), Expect = 7e-74
 Identities = 87/276 (31%), Positives = 131/276 (47%), Gaps = 24/276 (8%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---------AALASTI-- 61
            RL GKVA ITG ARG G   A   A++GA IV  D+  +             L  T+  
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101

Query: 62  ----GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
               G R      DV     +++ V  A++  G +DI+ +N GIS  G     +++ D +
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEV---VSLTDQQ 158

Query: 116 F--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
           +  +L  NL G  H  +    +MIE  + GS+I  SS+  + G      Y+ SK  + GL
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSGSLLR 231
             S A E+G+H IRVN ++P  V +EM +N    + +L   +    E    +    +LL 
Sbjct: 219 MLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
                 EDV+ A  +LAS+EA +I    + +DGG  
Sbjct: 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  226 bits (578), Expect = 1e-73
 Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 19/268 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR---- 64
             R +GK  +ITG + GIG + A +FA+ GA + I    ++        I   G      
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSI-TSLNMEDVKFLLSVNL 122
             +  DVT+    +  +   ++  G++DI+ NNAG + + G+  T   +E  +    +N 
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 140

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACEL 181
             ++   +   + +I+   KG I+  SS  A     + +  Y+ +K A+    R TA +L
Sbjct: 141 QAVIEMTQKTKEHLIK--TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDL 198

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIEDV 240
            +HG+RVN +SP  V +  +       +G  +   +++   +      +  G     E++
Sbjct: 199 IQHGVRVNSVSPGAVATGFM-----GAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 253

Query: 241 AQAALFLASE-EAGFITAHNLVIDGGYT 267
           A   +FLA    + +I   ++V DGG T
Sbjct: 254 ANIIVFLADRNLSSYIIGQSIVADGGST 281

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  224 bits (573), Expect = 3e-73
 Identities = 81/262 (30%), Positives = 119/262 (45%), Gaps = 18/262 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YIH 67
           RL GK A+ITG  +GIGA  A+ FA  GA +V++      LD    AL    G     + 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D+ + +      R A    G LD++ NNAGI      +   + +     ++VNL     
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGI-SHPQPVVDTDPQLFDATIAVNLRAPAL 135

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
                 KAM+     G+II  +S+AA+      +AY  SK  ++   +  A ELG HGIR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
            N + P  V +EM          +     E     +     L  GR A   +V+ A ++L
Sbjct: 196 ANSVCPTVVLTEMG---------QRVWGDEAKSAPMIARIPL--GRFAVPHEVSDAVVWL 244

Query: 248 ASEEAGFITAHNLVIDGGYTTG 269
           AS+ A  I   ++ +DGGYT G
Sbjct: 245 ASDAASMINGVDIPVDGGYTMG 266

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  223 bits (571), Expect = 4e-73
 Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 10/256 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADIL--DELGAALASTI---GGR--YIHCD 69
            KVA++TGGA+GIG   ++  A +G  I +AD+   +E  A     I     +  ++  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT + + +SA+  A    G  D++ NNAGI+     +  +  ED+K + SVN+  +  GI
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           + A++   E   KG II  +S AAI G     AYS +K A+ GL ++ A EL   G  VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
             +P  V + M      +          E  K    S +L  GR +  EDVA    FLAS
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL--GRPSVPEDVAGLVSFLAS 238

Query: 250 EEAGFITAHNLVIDGG 265
           E + ++T   +++DGG
Sbjct: 239 ENSNYVTGQVMLVDGG 254

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  223 bits (571), Expect = 6e-73
 Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGR--Y 65
            K L GKV VITG + G+G + A  FA   A +V+     E  A ++   I   GG    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DVT E DV + V+ A+   G+LD+M NNAG+     S   +++ D   ++  NL G 
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV-SSHEMSLSDWNKVIDTNLTGA 120

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
             G + A K  +E   KG++I  SS    +       Y+ SK  +  +  + A E    G
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I P  + + +                 E    V     +  G     E++A  A 
Sbjct: 181 IRVNNIGPGAINTPIN---------AEKFADPEQRADVESMIPM--GYIGEPEEIAAVAA 229

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS EA ++T   L  DGG T
Sbjct: 230 WLASSEASYVTGITLFADGGMT 251

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  223 bits (570), Expect = 9e-73
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGR-- 64
           +  + GKVA++TG A+GIG A A+     GA + + D   E G    + +       +  
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
           +I CDV  ++ +    R  V   G+LDI+ NNAG++         N ++ +  L +NL  
Sbjct: 62  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 112

Query: 125 ILHGIKHAAKAMIE--GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA--CE 180
           ++ G       M +  G   G II  SS A +M       Y  SK  I+G  RS A    
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           L   G+R+N I P  V + +L +  ++   +   +  E    ++D              +
Sbjct: 173 LMNSGVRLNAICPGFVNTAILESIEKE---ENMGQYIEYKDHIKDMIKY--YGILDPPLI 227

Query: 241 AQAALFLASEEAGFITAHNLVIDGGYT 267
           A   + L  ++A  +    + I     
Sbjct: 228 ANGLITLIEDDA--LNGAIMKITTSKG 252

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  220 bits (564), Expect = 6e-72
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 14/263 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGR--YI 66
            L+  VAV+TGG+ GIG AT +L  E GA +       E   A  S +     G R    
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNG 124
            CDV     V +         G   I+ NNAG        T     D  +   L +    
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS---TFAETTDEAWSEELQLKFFS 121

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           ++H ++     +   +   +I+C +S  A        A S ++  +  L RS A E    
Sbjct: 122 VIHPVRAFLPQLES-RADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           G+RVN I    V S      +     +     +   ++ R+    L GR     + A+A 
Sbjct: 181 GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKPIEAARAI 239

Query: 245 LFLASEEAGFITAHNLVIDGGYT 267
           LFLAS  + + T  ++ + GG +
Sbjct: 240 LFLASPLSAYTTGSHIDVSGGLS 262

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  220 bits (564), Expect = 7e-72
 Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 20/261 (7%)

Query: 12  SKRLTGKVAVITGGA-RGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GR 64
              L GKV ++T  A  GIG+ TA+     GA +VI+D  +         +         
Sbjct: 17  HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVE 76

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            + CDVT  E V++ +   V   G+LD++ NNAG+ G    +  +  E+   +L+V L  
Sbjct: 77  AVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNVTLTS 135

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           ++   + A +        G I+  +S        +   Y+ +K  ++ L R +A E  + 
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEF 195

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           G+R+N +SP     + L                E+   +    +   GR+A   +VA   
Sbjct: 196 GVRINAVSPSIARHKFL----------EKTSSSELLDRLASDEAF--GRAAEPWEVAATI 243

Query: 245 LFLASEEAGFITAHNLVIDGG 265
            FLAS+ + ++T   + +   
Sbjct: 244 AFLASDYSSYMTGEVVSVSSQ 264

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  220 bits (562), Expect = 1e-71
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 24/261 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L   VA++TG A GIG A A  FA+ GA +V+ D+  E   A+A+ I   GG+   + C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGIL 126
           +VT E+  E+ ++ A+   G++ ++ NNAG  G        +M    F     +NL  + 
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK----PFDMPMSDFEWAFKLNLFSLF 124

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              + AA  M +    G+I+  SS A     +   +Y  SK A+  L R+ A ++G  GI
Sbjct: 125 RLSQLAAPHMQK-AGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I+P  + ++ L          A +   E+ + +     L  GR    +D+A AALF
Sbjct: 184 RVNAIAPGAIKTDAL----------ATVLTPEIERAMLKHTPL--GRLGEAQDIANAALF 231

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L S  A +I+   L + GG  
Sbjct: 232 LCSPAAAWISGQVLTVSGGGV 252

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  220 bits (563), Expect = 1e-71
 Identities = 71/269 (26%), Positives = 113/269 (42%), Gaps = 21/269 (7%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRY- 65
            R + K  +ITG + GIG  TA LFA+ GA++ I     E        I        +  
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 66  -IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSI---TSLNMEDVKFLLSVN 121
            +  DVT E+  +  +   +   G++D++ NNAG +         T   ++     L +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACE 180
           L  ++   K     ++    KG I+  SS  A          Y+++K A+    RSTA +
Sbjct: 122 LQAVIEMTKKVKPHLV--ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAID 179

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIED 239
           L K GIRVN +SP  V +          +G  D   ++    +      +  G +   E 
Sbjct: 180 LAKFGIRVNSVSPGMVETGFT-----NAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH 234

Query: 240 VAQAALFLASEEAGF-ITAHNLVIDGGYT 267
           +A   LFLA     F I   ++V DGG +
Sbjct: 235 IANIILFLADRNLSFYILGQSIVADGGTS 263

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  218 bits (558), Expect = 6e-71
 Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 15/260 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L G  A++TGG++GIG A  +  A  GA +      ++            G       C
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC 77

Query: 69  DVTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           D+    + +  ++     + G+L+I+ NNAG+            +D   ++  N     H
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYH 136

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A   +    + G++I  SS A      +   YS SK AI  + +S ACE  K  IR
Sbjct: 137 LSQIAYPLLKA-SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN ++P  + + ++     +   K +   +E          +  GR+   ++V+    FL
Sbjct: 196 VNSVAPGVILTPLV-----ETAIKKNPHQKEEIDNFIVKTPM--GRAGKPQEVSALIAFL 248

Query: 248 ASEEAGFITAHNLVIDGGYT 267
               A +IT   +  DGG+T
Sbjct: 249 CFPAASYITGQIIWADGGFT 268

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  217 bits (555), Expect = 9e-71
 Identities = 86/259 (33%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGR--YIHC 68
           ++RL  K+AVITGGA GIG A A+ FA  GA I IAD++      A    +G R   + C
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKC 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV++  DVE+  +  +S  G+ DI+ NNAGI         L  E  K    +N++     
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSGFLM 120

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K     M      G II  +S+   +   A   Y  +K A IG  R+ A +LGK GI V
Sbjct: 121 AKAFVPGMKR-NGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P  V +              +         V  +      R     D+  AA FLA
Sbjct: 180 NAIAPSLVRTATT-----------EASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA 228

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S++A FIT   L +DGG  
Sbjct: 229 SDDASFITGQTLAVDGGMV 247

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  215 bits (551), Expect = 9e-70
 Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 10/269 (3%)

Query: 6   DTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALAST 60
            T  L  + +  K AVITG   GIG A A+  A+ GA+IV+        +  +   +A  
Sbjct: 14  GTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL 73

Query: 61  IGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLL 118
             G   +   D+TK  ++   + +     G  DI+ NNAG+      I    +E    ++
Sbjct: 74  SSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFV-EKIEDFPVEQWDRII 132

Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA 178
           +VNL+   H I+ A   M + +  G II  +S+  ++      AY  +K  I+GL ++ A
Sbjct: 133 AVNLSSSFHTIRGAIPPMKK-KGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVA 191

Query: 179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE 238
            E+ + G+ VN I P  V + ++            +  E+V   V   G     +  ++E
Sbjct: 192 LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITVE 250

Query: 239 DVAQAALFLASEEAGFITAHNLVIDGGYT 267
            VA  AL+LA ++A  IT  ++ +DGG+T
Sbjct: 251 QVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  214 bits (547), Expect = 4e-69
 Identities = 86/278 (30%), Positives = 120/278 (43%), Gaps = 25/278 (8%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---------AALASTI 61
           S     GK A+ITGGARG+G + A   AE GA I I D  +              LA T+
Sbjct: 4   SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETV 63

Query: 62  ------GGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMED 113
                 G R I    DV     +ES V  A    G +DI   NAGIS          +E 
Sbjct: 64  ALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPE---VES 120

Query: 114 VKF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII 171
            ++  ++  NL G  + I   A  MI+ +  G I+  SS        A  +Y  SK  +I
Sbjct: 121 AQWDEVIGTNLTGTFNTIAAVAPGMIK-RNYGRIVTVSSMLGHSANFAQASYVSSKWGVI 179

Query: 172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE--EVCKMVRDSGSL 229
           GL +  A +L  +GI VN ++P  + + M  N +     + D++    +  + V  S  L
Sbjct: 180 GLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHL 239

Query: 230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
                   E+V +A LFL  E +  IT   L ID G T
Sbjct: 240 QYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  213 bits (544), Expect = 7e-69
 Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 24/259 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDV 70
            RL+GK  ++TG A GIG A   LFA  GA +V  D  + L A   + +      +  DV
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHG 128
           +  + VE+    A+   G+L  + + AG++ S     S N+    +  +L VNL G    
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA---LSWNLPLEAWEKVLRVNLTGSFLV 118

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A + +   +  GS++ T S A  +G      Y+  K  ++GLAR+ A EL + G+RV
Sbjct: 119 ARKAGEVL---EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  + + M               P    +    +  L  GR+   E+VAQAALFL 
Sbjct: 175 NVLLPGLIQTPMT-----------AGLPPWAWEQEVGASPL--GRAGRPEEVAQAALFLL 221

Query: 249 SEEAGFITAHNLVIDGGYT 267
           SEE+ +IT   L +DGG +
Sbjct: 222 SEESAYITGQALYVDGGRS 240

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  213 bits (545), Expect = 8e-69
 Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 28/264 (10%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L+GK A+ITG + GIG   A  +AE GA + +A    +    +A  I   GG+   I C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT+ + V   +       G +DI   NAGI      +  + +E+ + +   N+ G+   
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLD-MPLEEFQRIQDTNVTGVFLT 147

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELGKHGI 186
            + AA+AM++    G+II T+S +  +  +      Y  SK A++ L ++ A EL  H I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207

Query: 187 RVNCISPHGVPSEM---LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           RVN +SP  + +E+   L + +  +  K  +                 GR    E++   
Sbjct: 208 RVNSVSPGYIRTELVEPLADYHALWEPKIPL-----------------GRMGRPEELTGL 250

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
            L+LAS  + ++T  ++VIDGGYT
Sbjct: 251 YLYLASAASSYMTGSDIVIDGGYT 274

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  212 bits (543), Expect = 1e-68
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 23/262 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---AALASTIGGR--YIHC 68
            L GKVA +TG + GIG A A+ +A+ GA + I             L  T G       C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGS-ITSLNMEDVKFLLSVNLNGILH 127
           +++  + VE  +       G +D+   NAG++ + G  I   N +    ++SV+LNG+ +
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHG 185
              +  K   +   KGS+I TSS +  +         Y+ +K A   LA+S A E     
Sbjct: 151 CSHNIGKIFKK-NGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
            RVN ISP  + +++            D   +++         L  GR    +++    L
Sbjct: 210 -RVNTISPGYIDTDI-----------TDFASKDMKAKWWQLTPL--GREGLTQELVGGYL 255

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS  + F T  ++VIDGGYT
Sbjct: 256 YLASNASTFTTGSDVVIDGGYT 277

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  211 bits (539), Expect = 3e-68
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 17/255 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
            L G+  ++TG  +GIG  T +     GA +V          +L     G   +  D+  
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGD 63

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            E  E A+       G +D++ NNA ++        +  E       VNL  ++   +  
Sbjct: 64  WEATERALGSV----GPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+ +I     G+I+  SS  +         Y  +K A+  L +  A ELG H IRVN ++
Sbjct: 119 ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN 178

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V + M         G+A        K + +   L  G+ A +E V  A LFL S+ +
Sbjct: 179 PTVVMTSM---------GQATWSDPHKAKTMLNRIPL--GKFAEVEHVVNAILFLLSDRS 227

Query: 253 GFITAHNLVIDGGYT 267
           G  T   L ++GG+ 
Sbjct: 228 GMTTGSTLPVEGGFW 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  210 bits (538), Expect = 3e-68
 Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 12/257 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTIGGRYIHCDVTK 72
             +GK   +TG  +GIG ATA  F E GA +   D    +     A+ +       DV  
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEV------MDVAD 57

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              V    +  ++   +LD + N AGI    G+   L+ ED +   +VN+ G  +  +  
Sbjct: 58  AAQVAQVCQRLLAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQT 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
                  QR G+I+  +S AA    +   AY  SK A+  LA S   EL   G+R N +S
Sbjct: 117 MNQFRR-QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVS 175

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P    ++M            + +     +  +    L  G+ A  +++A   LFLAS+ A
Sbjct: 176 PGSTDTDMQ-RTLWVSDDAEEQRIRGFGEQFKLGIPL--GKIARPQEIANTILFLASDLA 232

Query: 253 GFITAHNLVIDGGYTTG 269
             IT  ++V+DGG T G
Sbjct: 233 SHITLQDIVVDGGSTLG 249

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  210 bits (537), Expect = 6e-68
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 31/269 (11%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--- 64
               L  ++ ++TG + GIG   A  +A  GA +++    +E    +AS I    GR   
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65

Query: 65  --YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
              +       E+ +   +       +LD + +NAG+ G    ++  N +  + ++ VN+
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
           N      +     +++    GS++ TSSS    G     AY+ SK A  G+ +  A E  
Sbjct: 126 NATFMLTQALLPLLLK-SDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ 184

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           +  +RVNCI+P G  + M  +A+          P E              +  +  D+  
Sbjct: 185 Q-RLRVNCINPGGTRTAMRASAF----------PTED-----------PQKLKTPADIMP 222

Query: 243 AALFLASEEAGFITAHNLVIDGGYTTGTS 271
             L+L  +++   T        G   G S
Sbjct: 223 LYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  210 bits (536), Expect = 9e-68
 Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YIH 67
            ++GKVAVITG + GIG A A+ FA+ GAHIV+       L E   +L    G R   + 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV   E V++ V    S  G  DI+ NNAG   +  +I     E  +F   + +   + 
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE-TIMEAADEKWQFYWELLVMAAVR 122

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +     M   +  G+II  +S  A+        Y+++K A++  +++ A E+ K  IR
Sbjct: 123 LARGLVPGMRA-RGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VNCI+P  + +   +   ++         +   + V D  + +  R AS E++A   +FL
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFVFL 240

Query: 248 ASEEAGFITAHNLVIDGGYT 267
            SE A +       +DGG  
Sbjct: 241 CSERATYSVGSAYFVDGGML 260

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  210 bits (537), Expect = 9e-68
 Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 18/250 (7%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHC 68
           S  +   K+A++TG   G+G A A   A  G  + +A    +     A+ IG     +  
Sbjct: 22  SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT 81

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT  + V +     V   G++D++FNNAG       +  L     K ++  NL G    
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 129 IKHAAKAMIE-GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            + A + M     R G II   S +A      S  Y+ +K AI GL +ST+ +   H I 
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIA 201

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
              I      + M             MK      + +   S+       +  VA A +++
Sbjct: 202 CGQIDIGNADTPMA----------QKMKAG----VPQADLSIKVEPVMDVAHVASAVVYM 247

Query: 248 ASE-EAGFIT 256
           AS      + 
Sbjct: 248 ASLPLDANVQ 257

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  209 bits (535), Expect = 1e-67
 Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 27/273 (9%)

Query: 8   NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGG 63
               +     K  ++TGG RGIG A  +  A  GA++ +              +    G 
Sbjct: 5   APGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV 64

Query: 64  R--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN 121
           +     CDV+  + V   ++   +  G +  +  NAG+S    +   L  ED  F+  VN
Sbjct: 65  KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVN 123

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-------AYSLSKEAIIGLA 174
           + G+ +  +  AK  ++ Q+KGSI+ TSS ++ +   +S         Y+ SK A   L 
Sbjct: 124 VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLV 183

Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS 234
           +  A E    GIRVN +SP  V ++                 +++      +  L   R 
Sbjct: 184 KGLAAEWASAGIRVNALSPGYVNTDQ-----------TAHMDKKIRDHQASNIPL--NRF 230

Query: 235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
           A  E++   A+ L S+ A ++T     IDGG  
Sbjct: 231 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  209 bits (534), Expect = 2e-67
 Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 26/259 (10%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
            R   KV VITG ++GIGA   + + +    +V         +A         +  D++K
Sbjct: 24  MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-SIKPSADPDIHT---VAGDISK 79

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            E  +  VR  +   G++D + NNAG+  +      +  ED    L VN+ G  H  + A
Sbjct: 80  PETADRIVREGIERFGRIDSLVNNAGVFLA-KPFVEMTQEDYDHNLGVNVAGFFHITQRA 138

Query: 133 AKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           A  M++ Q  G I+  ++S       G+ S   SL+K  +  + RS A E  + G+RVN 
Sbjct: 139 AAEMLK-QGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNA 197

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           +SP  + +               M P E    +     +  GR   I DV  A L+L   
Sbjct: 198 VSPGVIKT--------------PMHPAETHSTLAGLHPV--GRMGEIRDVVDAVLYLE-- 239

Query: 251 EAGFITAHNLVIDGGYTTG 269
            AGFIT   L +DGG   G
Sbjct: 240 HAGFITGEILHVDGGQNAG 258

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  207 bits (530), Expect = 4e-67
 Identities = 44/251 (17%), Positives = 78/251 (31%), Gaps = 12/251 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
            +A++T      G A  +   ++G  +V  D      AA                E+  E
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDA-SFADAAERQRFESENPGTIALAEQKPE 60

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGIKHAAKA 135
             V   +     +D + +N  I      +      +     +        +  ++ A   
Sbjct: 61  RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAP 120

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           +       S+I  +SS        +  Y  ++ A + L  S A  L + GI +  I P+ 
Sbjct: 121 LRA-AGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNF 179

Query: 196 VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI 255
             +                   E+ + V     L  GR    +++     FLAS  A  I
Sbjct: 180 FNNPTYFPT------SDWENNPELRERVDRDVPL--GRLGRPDEMGALITFLASRRAAPI 231

Query: 256 TAHNLVIDGGY 266
                   GGY
Sbjct: 232 VGQFFAFTGGY 242

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  207 bits (530), Expect = 6e-67
 Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 7/256 (2%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGR--YIHCDVT 71
           L GK A++TG   GIG   A++ A  GA+IV+    D   A A  +  G +  +   D++
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
               +E+   LA    G +DI+ NNAGI      +    +E    ++++NL+ + HG + 
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHV-APVEQFPLESWDKIIALNLSAVFHGTRL 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A   M   +  G II  +S   ++G     AY  +K  ++GL +    E     +  N I
Sbjct: 121 ALPGMRA-RNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
            P  V + ++               +    ++ +          + E + +  LFL SE 
Sbjct: 180 CPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS--LAFVTPEHLGELVLFLCSEA 237

Query: 252 AGFITAHNLVIDGGYT 267
              +      +DGG+ 
Sbjct: 238 GSQVRGAAWNVDGGWL 253

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  208 bits (531), Expect = 6e-67
 Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 16/260 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L G  A++TGG+RGIG    +  A  GA +       +      +     G +     C
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 65

Query: 69  DVTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           D++   + +  +    + + G+L+I+ NNAGI           +ED   ++S+N     H
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYH 124

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
               A   +     +G+++  SS +  +       Y  +K A+  L R  A E  K  IR
Sbjct: 125 LSVLAHPFLKA-SERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN + P  + + ++           D + +E    + D  +L   R    +++A    FL
Sbjct: 184 VNGVGPGVIATSLVEMTI------QDPEQKENLNKLIDRCAL--RRMGEPKELAAMVAFL 235

Query: 248 ASEEAGFITAHNLVIDGGYT 267
               A ++T   + +DGG  
Sbjct: 236 CFPAASYVTGQIIYVDGGLM 255

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  207 bits (528), Expect = 1e-66
 Identities = 48/276 (17%), Positives = 94/276 (34%), Gaps = 36/276 (13%)

Query: 1   MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST 60
                 +  +       K  ++ GG+  +GA   K F     + +  D  +   A  +  
Sbjct: 6   HHHHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS-- 63

Query: 61  IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSV 120
                     + EE+++S +    S   ++D     AG    G + +   ++ VK ++ +
Sbjct: 64  -----FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDM 118

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           NL          AK + +G   G  + T +SAA+       AY  +K A   + +  A E
Sbjct: 119 NLYSAFASAHIGAKLLNQG---GLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASE 175

Query: 181 LG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE 238
            G    G     I P  + +       RKY+  A+                       + 
Sbjct: 176 NGGLPAGSTSLGILPVTLDTPTN----RKYMSDANF-----------------DDWTPLS 214

Query: 239 DVAQAAL-FLASEEAGFITAHNLVID--GGYTTGTS 271
           +VA+    +  + ++       +  +     TT T+
Sbjct: 215 EVAEKLFEWSTNSDSRPTNGSLVKFETKSKVTTWTN 250

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  206 bits (527), Expect = 2e-66
 Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 17/255 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
             +G  A++TG  +GIG  T K    +GA +V     +    +LA    G   +  D+  
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 63

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            +  E A+       G +D++ NNA +         +  E      SVNL  +    +  
Sbjct: 64  WDATEKALGGI----GPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 118

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+ MI     GSI+  SS  A +       YS +K A+  L ++ A ELG H IRVN ++
Sbjct: 119 ARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVN 178

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V ++M         GK      E  + +++   L   + A +EDV  + LFL S+ +
Sbjct: 179 PTVVLTDM---------GKKVSADPEFARKLKERHPL--RKFAEVEDVVNSILFLLSDRS 227

Query: 253 GFITAHNLVIDGGYT 267
              +   +++D GY 
Sbjct: 228 ASTSGGGILVDAGYL 242

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  205 bits (524), Expect = 5e-66
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 17/262 (6%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YI 66
           S  +  KV +ITGG+ G+G   A  FA+ GA +VI     E        I    G+   +
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV   +D++  +       G++DI+ NNA  +        L++     ++++ LNG  
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTF 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG-KHG 185
           +  +   K  IE   KG+II   ++ A   G      + +K  ++ + ++ A E G K+G
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           IRVN I+P  +      +             EE+ K    S  L  GR  + E++A  A 
Sbjct: 180 IRVNAIAPGPIERTGGADKL--------WISEEMAKRTIQSVPL--GRLGTPEEIAGLAY 229

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +L S+EA +I    + +DGG  
Sbjct: 230 YLCSDEAAYINGTCMTMDGGQH 251

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  205 bits (524), Expect = 1e-65
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 22/263 (8%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR-- 64
                 G++A++TGG  G+G   A+  +  G  +VI       LD     +    G    
Sbjct: 27  GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVR 86

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            + CDV   + V +      +   +LD++ NNAG +     +  +  E    +++ NL G
Sbjct: 87  AVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146

Query: 125 ILHGIKHAAKAMIE-GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
                +HA + M     R G II   S +A      S  Y+ +K AI GL +STA +   
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRM 206

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           H I    I      ++M           A M        ++ +G +    +  IE +A+A
Sbjct: 207 HDIACGQIDIGNAATDMT----------ARMSTGV----LQANGEVAAEPTIPIEHIAEA 252

Query: 244 ALFLASEEA-GFITAHNLVIDGG 265
            +++AS      +    ++    
Sbjct: 253 VVYMASLPLSANVLTMTVMATRM 275

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  204 bits (520), Expect = 2e-65
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGGR--YIH 67
           L GKVAV+TG   GIG   A   A  GA IV+        ++++ A LA+  G +  Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++K E V   V  AV   G++DI+ NNAGI  +   I     E    +L++NL+ + H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTEKWDAILALNLSAVFH 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G   A   M + Q  G II  +S+  ++      AY  +K  ++G  + TA E    GI 
Sbjct: 121 GTAAALPHMKK-QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR----GRSASIEDVAQA 243
            N I P  V + ++         K  +  E   + +     L       +  + E +   
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL-----LSEKQPSLQFVTPEQLGGT 234

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A+FLAS+ A  IT   + +DGG+T
Sbjct: 235 AVFLASDAAAQITGTTVSVDGGWT 258

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  204 bits (521), Expect = 2e-65
 Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 27/266 (10%)

Query: 14  RLTGKVAVITG--GARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGGR-- 64
            L GKV V+TG  G +G+G   A+  AE GA + I         +E    L  T G +  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
              C V   E  E  V+  V+  GQ+D    NAG +   G +   ++E    ++ V+LNG
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD-GSVEAWNHVVQVDLNG 135

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELG 182
             H  K       E +  GS++ T+S +  +        +Y+++K   I +ARS A E  
Sbjct: 136 TFHCAKAVGHHFKE-RGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR 194

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
               RVN ISP  + + +           +D  P+E  ++      +  GR    +++  
Sbjct: 195 DF-ARVNSISPGYIDTGL-----------SDFVPKETQQLWHSMIPM--GRDGLAKELKG 240

Query: 243 AALFLASEEAGFITAHNLVIDGGYTT 268
           A ++ AS+ + + T  +L+IDGGYTT
Sbjct: 241 AYVYFASDASTYTTGADLLIDGGYTT 266

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  203 bits (518), Expect = 4e-65
 Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 25/268 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGR--Y 65
              L GK  +ITG ++GIG ATA+LFA  GA + +             +++   GG   +
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
              D+   E  +  V   V+  G +D++ NNAG       +  ++      ++  N+  +
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSV 121

Query: 126 LHGIKHAAKAMIE----GQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACE 180
           +   K A   +        +  ++I T S A   GG      Y  +K  +  + ++    
Sbjct: 122 VMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDF 181

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
             K G+R N +SP  V +                K ++V   + +   +  GR  + E++
Sbjct: 182 HTKDGVRFNIVSPGTVDTAFH-----------ADKTQDVRDRISNGIPM--GRFGTAEEM 228

Query: 241 AQAALFLASEEA-GFITAHNLVIDGGYT 267
           A A LF AS  A G+IT   L I+GG  
Sbjct: 229 APAFLFFASHLASGYITGQVLDINGGQY 256

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  203 bits (518), Expect = 5e-65
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 19/259 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR---YIHCDV 70
           RL G  A +TG   GIG    + FA +GA +++ D         A  +G      I  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T  E + +A   A +    + I+ N+AGI          +    + +++VN++G+    +
Sbjct: 68  TDAEAMTAAAAEAEAV-APVSILVNSAGI-ARLHDALETDDATWRQVMAVNVDGMFWASR 125

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
              +AM+  +  G+I+   S +  +      + +Y  SK A+  L R+ A E    G+RV
Sbjct: 126 AFGRAMVA-RGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRV 184

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  V +EM      K   + ++  E    M         GR     ++A AALFLA
Sbjct: 185 NALAPGYVATEMT----LKMRERPELF-ETWLDMT------PMGRCGEPSEIAAAALFLA 233

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S  A ++T   L +DGGYT
Sbjct: 234 SPAASYVTGAILAVDGGYT 252

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  203 bits (518), Expect = 6e-65
 Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 20/260 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            L  K  ++TGG +GIG A  + FA  GA I      +       S     G +     C
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 70

Query: 69  DVTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           D +   + E  ++   S + G+LDI+ NN G             ED  F +S NL    H
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYH 129

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A   +      G+II  SS A ++       YS +K A+  LAR+ ACE    GIR
Sbjct: 130 LSQLAHPLLKA-SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIR 188

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
            N ++P  + + +             +  +E  K+V     L  GR    E+V+    FL
Sbjct: 189 ANAVAPAVIATPLA----------EAVYDDEFKKVVISRKPL--GRFGEPEEVSSLVAFL 236

Query: 248 ASEEAGFITAHNLVIDGGYT 267
               A +IT   + +DGG T
Sbjct: 237 CMPAASYITGQTICVDGGLT 256

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  201 bits (514), Expect = 2e-64
 Identities = 49/250 (19%), Positives = 94/250 (37%), Gaps = 7/250 (2%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
             A++T      G  +A   +E G  +   D   +    L +     Y       E++  
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPMSEQEPA 60

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
             +    S  GQ+D++ +N   +     I    +ED +  +          +   A  M 
Sbjct: 61  ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMK 120

Query: 138 EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVP 197
           + ++ G II  +S+           Y+ ++     LA + + ELG++ I V  I P+ + 
Sbjct: 121 K-RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 179

Query: 198 SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITA 257
           SE     Y     K +    E    V+   +L   R  + +++ +   FLAS    ++T 
Sbjct: 180 SEDSPYFYPTEPWKTN---PEHVAHVKKVTAL--QRLGTQKELGELVAFLASGSCDYLTG 234

Query: 258 HNLVIDGGYT 267
               + GG+ 
Sbjct: 235 QVFWLAGGFP 244

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  202 bits (516), Expect = 2e-64
 Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 25/264 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDV 70
           K+  G  A+++GGA G+G AT +    +G  +VIAD+  E G ALA  +G    ++  +V
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV 85

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSIT----SLNMEDVKFLLSVNLNGIL 126
           T E+ V +A+  A         +  + G   +   +       +M      + + LNG  
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 127 HGIKHAAKAMI-----EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           +  +  A ++      E   +G+++ T+S A   G +   AY+ +K  +IGL  + A +L
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL 205

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
              GIRVN I+P  + + ++            +  E + K   +       R  + ++ A
Sbjct: 206 SSAGIRVNTIAPGTMKTPIM----------ESVGEEALAKFAAN--IPFPKRLGTPDEFA 253

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
            AA FL +   G+I    + +DG 
Sbjct: 254 DAAAFLLTN--GYINGEVMRLDGA 275

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  202 bits (515), Expect = 4e-64
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 9/251 (3%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-----YIH 67
               G+ AV+TGGA GIG ATA  FA  GA +V++D+         + + G+      + 
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CDV   +++      A    G +D++F+NAGI    G +  +N +D ++++ ++L G +H
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWGSIH 145

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++     ++E    G I  T+S A ++       Y ++K  ++GLA + A E+  +GI 
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           V+ + P  V ++++ N+ R    +                   +  S S +DVA+     
Sbjct: 206 VSVLCPMVVETKLVSNSER---IRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADA 262

Query: 248 ASEEAGFITAH 258
                 +I  H
Sbjct: 263 ILANRLYILPH 273

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  200 bits (510), Expect = 7e-64
 Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 19/259 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGR--YIHC 68
              K A++TG +RG+G A A   AENG +IVI     +  A   A  I   G +   +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           +V +   ++   +      G+LD+  NNA   G    +  L      + +++N   +L  
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-GVLRPVMELEETHWDWTMNINAKALLFC 120

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + AAK M +    G I+  SS  +I          +SK A+  L R  A EL    I V
Sbjct: 121 AQEAAKLMEK-NGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N +S   + ++ L         K     E++ +  R +     GR   I+D+     FL 
Sbjct: 180 NAVSGGAIDTDAL---------KHFPNREDLLEDARQNTPA--GRMVEIKDMVDTVEFLV 228

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S +A  I    +++DGG +
Sbjct: 229 SSKADMIRGQTIIVDGGRS 247

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  200 bits (512), Expect = 1e-63
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 24/277 (8%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI--------LDELGAALASTI 61
           L+   L G+VA++TGGA GIG A  K   E G+++VIA           DEL A L  T 
Sbjct: 11  LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 70

Query: 62  GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
             R   I C++  EE+V + V+  +   G+++ + NN G          ++ +    +L 
Sbjct: 71  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLE 129

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTA 178
            NL G  +  K    + ++ +  GSI+  +       G         ++  +  L +S A
Sbjct: 130 TNLTGTFYMCKAVYSSWMK-EHGGSIV--NIIVPTKAGFPLAVHSGAARAGVYNLTKSLA 186

Query: 179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE 238
            E    GIR+NC++P  + S+  V  Y           +   +           R    E
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENY-------GSWGQSFFEGSFQKIPA--KRIGVPE 237

Query: 239 DVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSF 275
           +V+    FL S  A FIT  ++ +DGG +  T S   
Sbjct: 238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  200 bits (512), Expect = 1e-63
 Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 17/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
             GKVA ITGG  G+G     L +  GA  VIA    D+L      ++S  G +   I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV   + V++ V   +   G  +I+ NNA           L+    K +  + LNG    
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAG-NFISPTERLSPNAWKTITDIVLNGTAFV 142

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
                K +I+ Q+  + +  ++  A  G       + +K  +  +++S A E GK+G+R 
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I P  + ++         L       +E+   +        GR  ++E++A  A FL 
Sbjct: 203 NVIQPGPIKTKGA----FSRLDPTGTFEKEMIGRI------PCGRLGTVEELANLAAFLC 252

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S+ A +I    +  DGG  
Sbjct: 253 SDYASWINGAVIKFDGGEE 271

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  198 bits (505), Expect = 3e-63
 Identities = 66/259 (25%), Positives = 103/259 (39%), Gaps = 31/259 (11%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--- 64
             + L G+V ++TG ARGIGAA A+ +A +GA +V+    +   A ++  I   G     
Sbjct: 8   HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPL 67

Query: 65  --YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
              ++ +    +             G+LD + +NA I G    +  L  ED   ++ VN+
Sbjct: 68  IIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL- 181
           N      +     +       SI  TSSS    G     AY +SK A  GL ++ A EL 
Sbjct: 128 NATFMLTRALLPLLKR-SEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELE 186

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
           G   +R N I+P    + M   AY       D  P                 + + ED+ 
Sbjct: 187 GVTAVRANSINPGATRTGMRAQAY------PDENPL---------------NNPAPEDIM 225

Query: 242 QAALFLASEEAGFITAHNL 260
              L+L   ++  I    L
Sbjct: 226 PVYLYLMGPDSTGINGQAL 244

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  198 bits (505), Expect = 5e-63
 Identities = 78/275 (28%), Positives = 119/275 (43%), Gaps = 23/275 (8%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGR- 64
           +S +R T +  V+ G  R IG A A  FA+ GA++V+       GA    + I   G   
Sbjct: 1   MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA 60

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             I  D+T   +VE+A+  A    G++  + + AG   +  +I  ++      +L VNL 
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELG 182
            +    K A   M +G   G+I+  SS A   GG      Y+ SK A++   R  A E+G
Sbjct: 121 SLFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
              IRVN + P  + +                   EV + V  + SL   R  S EDVA 
Sbjct: 178 P-KIRVNAVCPGMISTTFH----------DTFTKPEVRERVAGATSL--KREGSSEDVAG 224

Query: 243 AALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIY 277
              FLAS++A ++T     I+GG           +
Sbjct: 225 LVAFLASDDAAYVTGACYDINGGVLFSEGHHHHHH 259

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  197 bits (503), Expect = 5e-63
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCD 69
           ++RL GK A++TG A+GIG A A   A +GA ++++DI  E   A A++IG +   I  D
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM--EDVKFLLSVNLNGILH 127
           ++    V++      +  G +DI+ NNA I          ++  +  + ++ VNL G   
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFV---AWDDVDLDHWRKIIDVNLTGTFI 117

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +     M    + G +I  +S+    G     AY  +K  +IG  R+ A ELGK+ I 
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
            N ++P  + S+ +                E    V    ++        E +A    FL
Sbjct: 178 ANAVTPGLIESDGV----------KASPHNEAFGFVEMLQAM--KGKGQPEHIADVVSFL 225

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS++A +IT   L +D G
Sbjct: 226 ASDDARWITGQTLNVDAG 243

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  197 bits (503), Expect = 8e-63
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 27/254 (10%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIH 67
             L+G+VAV+TG +RGIGAA A+     GA +V+     E   A+   I   GG      
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CD++  + + +     ++  G+ D++ NNAG+   GG + ++   +   L++VNL     
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            ++  A AMI   ++G II  SS A         AY+ SK  + GL  S A EL +H +R
Sbjct: 145 LLRAFAPAMIA-AKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           V+ ++P  V +E                  +   +           +   +D+A     L
Sbjct: 204 VSLVAPGSVRTEF-----------GVGLSAKKSAL----------GAIEPDDIADVVALL 242

Query: 248 ASEEAGFITAHNLV 261
           A++      +  LV
Sbjct: 243 ATQADQSFISEVLV 256

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  197 bits (502), Expect = 1e-62
 Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADIL--DELGAALASTIGGR--YIHCDVTK 72
           GKV ++TG +RGIG +   +        V+  +   +     L    G R  Y+  D+T+
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           +  ++  V  AV   G++D +  NAG+     ++  +++   K L  +N   I+  +  A
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIA 121

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              +   +  G+++  SS A  M   +  AY  SK A+   A + A E  +  ++   ++
Sbjct: 122 LPELK--KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVA 177

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SEE 251
           P  V ++M VN  R+ +G + M  E++       G     +       A     LA    
Sbjct: 178 PGIVDTDMQVNI-RENVGPSSMSAEQLKMFR---GLKENNQLLDSSVPATVYAKLALHGI 233

Query: 252 AGFITAHNLVIDGG 265
              +    L  +  
Sbjct: 234 PDGVNGQYLSYNDP 247

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  194 bits (494), Expect = 4e-61
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 18/257 (7%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
           L  KVA ITGG  GIG   A++F  +G H VIA      +      LA   G R   +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV     V +AV  A+   G++DI+ N A  +       +L+    K ++ ++ +G  + 
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +   +        G I+  +++    G         +K A+  + R  A E G   IRV
Sbjct: 144 SRVLYEKFFR-DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  +     +             P+        +  L   R  +  ++A + L+LA
Sbjct: 203 NSLAPGPISGTEGLRRL--------GGPQASLSTKVTASPL--QRLGNKTEIAHSVLYLA 252

Query: 249 SEEAGFITAHNLVIDGG 265
           S  A ++T   LV DGG
Sbjct: 253 SPLASYVTGAVLVADGG 269

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  192 bits (491), Expect = 1e-60
 Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 34/277 (12%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------- 61
            S  L GK   I+GG+RGIG A AK  A +GA++ +     E    L  TI         
Sbjct: 3   GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE 62

Query: 62  -GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLL 118
            GG+   I  D+   + V +AV   V   G +DI  NNA    + GSI  + ++    + 
Sbjct: 63  AGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASA-INLGSIEEVPLKRFDLMN 121

Query: 119 SVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARST 177
            + + G     +     M   +    I+  S    +         Y ++K  +   A   
Sbjct: 122 GIQVRGTYAVSQSCIPHMKG-RDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGI 180

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A EL   GI  N + P    +     A +  LG                G     RS   
Sbjct: 181 AEELRDAGIASNTLWPRTTVATA---AVQNLLG----------------GDEAMARSRKP 221

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMS 274
           E  A AA  + ++ + +     L  D    +G + +S
Sbjct: 222 EVYADAAYVVLNKPSSYTGNTLLCEDVLLESGVTDLS 258

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  192 bits (490), Expect = 2e-60
 Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 11/274 (4%)

Query: 1   MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALAS 59
            +A        S  L GKVA++TG  RGIG   A      G  +++        A  + +
Sbjct: 13  YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 72

Query: 60  TI---GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV 114
            I   G     +  +V   ED+      AV   G+LDI+ +N+G+  S G +  +  E+ 
Sbjct: 73  AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEF 131

Query: 115 KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGL 173
             + ++N  G     + A K +   +  G +I   S       +  HA YS SK AI   
Sbjct: 132 DRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETF 188

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
           AR  A ++    I VN ++P G+ ++M     R+Y+   +    E              R
Sbjct: 189 ARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR 248

Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
                D+A+   FLAS + G++T   + IDGG  
Sbjct: 249 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  192 bits (489), Expect = 2e-60
 Identities = 60/268 (22%), Positives = 98/268 (36%), Gaps = 37/268 (13%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---------- 61
           S  L+GK   ITG +RGIG A A   A +GA++ IA         L  TI          
Sbjct: 1   SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60

Query: 62  GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
           GG+   + CD+ +E+ V +AV   V   G +DI+ NNA             M+    +  
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQ 119

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-GLASH-AYSLSKEAIIGLARST 177
           VN  G     +     +++      I+  +   ++      +H  Y+L+K  +  +    
Sbjct: 120 VNARGSFVCAQACLPHLLQ-APNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGL 178

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A E G  G+ +N + P  V +                        +     +        
Sbjct: 179 AAEFGPQGVAINALWPRTVIATD---------------------AINMLPGVDAAACRRP 217

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           E +A AA  + + EA       L+ D  
Sbjct: 218 EIMADAAHAVLTREAAGFHGQFLIDDEV 245

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  190 bits (486), Expect = 3e-60
 Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 22/260 (8%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYI 66
             L G+  V+TGG +GIG   A +FA  GA++ +A        A  + +          +
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+     ++    AV   G +D++  NAG+      + ++  E +  + +VN+NG  
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLNGIFAVNVNGTF 124

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHG 185
           + ++    A+I     G ++ TSS    + G    + Y  +K A +G  R+ A EL  H 
Sbjct: 125 YAVQACLDALIA-SGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN I P  + +E L               EE    +  S     G   + ED+   A 
Sbjct: 184 ITVNAIMPGNIMTEGL-----------LENGEEYIASMARSIPA--GALGTPEDIGHLAA 230

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FLA++EAG+IT   + +DGG
Sbjct: 231 FLATKEAGYITGQAIAVDGG 250

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  190 bits (485), Expect = 8e-60
 Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 21/264 (7%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GGR--YI 66
            +    VA++TGG RGIG   A+  A +G  I I  I D  G   + + +   G R  ++
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGI 125
             D+      ++ V   V+  G++D + NNAGI+         L  E+   ++ VNL G 
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 126 LHGIKHAAKAMIE--GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           +   +   KAM+    +   SII  +S +A+M       Y +SK  +   ++  A  L +
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAE 204

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI V  + P  + S+M                 +   ++      +  R    ED+   
Sbjct: 205 TGIAVFEVRPGIIRSDMT-----------AAVSGKYDGLIESGLVPM-RRWGEPEDIGNI 252

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
              LA  + GF T   +  DGG +
Sbjct: 253 VAGLAGGQFGFATGSVIQADGGLS 276

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  190 bits (484), Expect = 9e-60
 Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 17/266 (6%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR- 64
           +SK L GKVA+ TG  RGIG   A      GA +V+     +   +E+ A L    G + 
Sbjct: 15  ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQG 73

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             I  D++K  +V +    AVS  G LD + +N+G+         +  E    + ++N  
Sbjct: 74  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTR 132

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELG 182
           G     +   K     +R G II TSS AA+M G+ +HA Y+ SK A+ G  R+ A + G
Sbjct: 133 GQFFVAQQGLKHC---RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG 189

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYL--GKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
             G+ VNCI+P GV ++M       Y   G   M  E++ + + +   L   R     D+
Sbjct: 190 AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL--KRIGYPADI 247

Query: 241 AQAALFLASEEAGFITAHNLVIDGGY 266
            +A   L  EE+ +I    + + GG 
Sbjct: 248 GRAVSALCQEESEWINGQVIKLTGGG 273

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  188 bits (481), Expect = 2e-59
 Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 16/264 (6%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR- 64
              RL GKVA++TG  RGIGAA A      GA +V+         +++ + + +  G   
Sbjct: 12  IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDA 70

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             I  D+ +  ++      AV+  G LDI  +N+G+  S G +  +  E+   + S+N  
Sbjct: 71  IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTR 129

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELG 182
           G     + A + + EG   G I+ TSS+ +    +  H+ YS SK A+    R  + + G
Sbjct: 130 GQFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186

Query: 183 KHGIRVNCISPHGVPSEM-LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
              I VN ++P G  ++M    ++           E+  +M   +  L   R+   +DVA
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL--HRNGWPQDVA 244

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
               FL S+E  ++    L +DGG
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDGG 268

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  187 bits (478), Expect = 3e-59
 Identities = 91/261 (34%), Positives = 130/261 (49%), Gaps = 22/261 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
           RL  K  +ITG A GIG AT +LFA+ GA +V  DI +      A  +G   +  DV   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADP 61

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILHGIKH 131
             VE     A++  G+LD + + AGI+          M    +  +L VNL G     K 
Sbjct: 62  ASVERGFAEALAHLGRLDGVVHYAGITRDN---FHWKMPLEDWELVLRVNLTGSFLVAKA 118

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNC 190
           A++AM E +  GSI+ T+S   +  G    A Y+ S   ++GL R+ A ELG+ GIRVN 
Sbjct: 119 ASEAMRE-KNPGSIVLTASRVYL--GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P  + + M               PE+V +    +  L  GR+    +VA AALFL S+
Sbjct: 176 LAPGFIETRMT-----------AKVPEKVREKAIAATPL--GRAGKPLEVAYAALFLLSD 222

Query: 251 EAGFITAHNLVIDGGYTTGTS 271
           E+ FIT   L +DGG T G +
Sbjct: 223 ESSFITGQVLFVDGGRTIGAA 243

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  188 bits (480), Expect = 4e-59
 Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 21/267 (7%)

Query: 8   NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTI---GG 63
           N          V ++TGG+RGIGAA  +L A  G  + +    +   A A+ + I   GG
Sbjct: 17  NLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG 76

Query: 64  R--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN 121
               I  DV    D+ +         G+LD + NNAGI      +  +++E ++ +L VN
Sbjct: 77  EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVN 136

Query: 122 LNGILHGIKHAAKAMIE--GQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTA 178
           + G +     A + M      + G+I+  SS AAI+G    +  Y+ SK AI       A
Sbjct: 137 VTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLA 196

Query: 179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE 238
            E+   GIRVN + P  + +++           A     +  + +  S  +   R+   E
Sbjct: 197 REVAAEGIRVNAVRPGIIETDLH----------ASGGLPDRAREMAPSVPM--QRAGMPE 244

Query: 239 DVAQAALFLASEEAGFITAHNLVIDGG 265
           +VA A L+L S  A ++T   L + GG
Sbjct: 245 EVADAILYLLSPSASYVTGSILNVSGG 271

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  187 bits (477), Expect = 6e-59
 Identities = 43/264 (16%), Positives = 78/264 (29%), Gaps = 32/264 (12%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGR--YIH 67
            LT K  +      GIG  T++   +      +     E   ALA            +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CDVT-KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            DVT    + +  ++        +DI+ N AGI         L+   ++  +++N  G++
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAINFTGLV 112

Query: 127 HGIKHAAKAMIE--GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +          +  G   G I    S            YS SK A++    S A      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           G+    I+P    + ++         +  +              LL   + + E   Q  
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVA-----------ELLLSHPTQTSEQCGQNF 221

Query: 245 LFLASEEAGFITAHNLVIDGGYTT 268
           +                +D G   
Sbjct: 222 VKAIEANK---NGAIWKLDLGTLE 242

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  187 bits (477), Expect = 8e-59
 Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 22/271 (8%)

Query: 2   EARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALAST 60
           +   +     S   T KVA++TG +RGIGAA A   A +G  +VI        A  +A  
Sbjct: 12  DLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK 71

Query: 61  I---GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
           I   GG+      DV+    V      A    G +D++ NNAGI     +I         
Sbjct: 72  IEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI-MPLTTIAETGDAVFD 130

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
            +++VNL G  + ++ AA+ +   +  G II  S+S   +   +   Y+ +K  +  +  
Sbjct: 131 RVIAVNLKGTFNTLREAAQRL---RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTH 187

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
             + EL    I VN ++P    +++            + K +EV         L   R  
Sbjct: 188 VLSKELRGRDITVNAVAPGPTATDLF----------LEGKSDEVRDRFAKLAPL--ERLG 235

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           + +D+A A  FLA  +  ++    L  +GG 
Sbjct: 236 TPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  186 bits (474), Expect = 9e-59
 Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 28/255 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTK 72
           ++    ++TG   G+G A      E G  + +     +        +G     I  D+  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            EDV+ A   AV W G  +++ + AG  G  G +     E ++ ++  NL   +   +  
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGT-GEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            + +   +R G +    SSAA +G      Y  SK  + G   S   EL    +R+  + 
Sbjct: 120 VRLIG--ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLY 177

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF-LASEE 251
           P G+ SE   N          M P                     ED A   L  L +  
Sbjct: 178 PSGIRSEFWDNTDHVDPSGF-MTP---------------------EDAAAYMLDALEARS 215

Query: 252 AGFITAHNLVIDGGY 266
           +  +T   +  + G+
Sbjct: 216 SCHVTDLFIGRNEGH 230

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  187 bits (478), Expect = 9e-59
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--Y 65
            S     + A +TG + GIG A A+  A  G  +       +  +A    +   G     
Sbjct: 18  GSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDG 77

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLN 123
             CDVT  ++V +AV  AV   G + I+ N+AG +G G    + +++D  +  +L  NL 
Sbjct: 78  SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGG---ETADLDDALWADVLDTNLT 134

Query: 124 GILHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           G+    +   +A  M E    G I+  +S+    G + +  Y+ SK  ++G  +S   EL
Sbjct: 135 GVFRVTREVLRAGGMRE-AGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFEL 193

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
            K GI VN + P  V + M       Y     +  +EV +       L  GR ++ E+VA
Sbjct: 194 AKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL--GRYSTPEEVA 251

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
               +L ++ A  ITA  L + GG
Sbjct: 252 GLVGYLVTDAAASITAQALNVCGG 275

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  186 bits (474), Expect = 2e-58
 Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 23/262 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
            LTGK A++TG ARG+G A A+  A  GA +++ DI   L A    T+   G     +  
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT E  +E+A     +    +DI+ NNAGI      +  L +E+ + ++  NL      
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLV 124

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + AAK MI     G II   S  +         Y+ +K  I  L  S A E  +  I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAAL 245
           N I P  + ++M  N        A ++ ++    V+           R    E++   A+
Sbjct: 185 NAIGPGYILTDM--NT-------ALIEDKQFDSWVKS-----STPSQRWGRPEELIGTAI 230

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FL+S+ + +I    + +DGG+ 
Sbjct: 231 FLSSKASDYINGQIIYVDGGWL 252

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  186 bits (474), Expect = 2e-58
 Identities = 63/258 (24%), Positives = 91/258 (35%), Gaps = 20/258 (7%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTKEED 75
            V  ITG A GIGAA  +L A  G  ++  D       A  ST GGR   +   + +   
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 76  -----VESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGI 129
                V  A     +    L +  N  G+S    G   +L+       + V         
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
                 +      G        A    G    AY+ SK A+  LAR    +    G+R+N
Sbjct: 122 AAELPMVEA-MLAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            ++P  V + +        L  +   P       R    L  GR +   +VA+A  FL  
Sbjct: 180 VVAPGAVETPL--------LQASKADPRYGESTRRFVAPL--GRGSEPREVAEAIAFLLG 229

Query: 250 EEAGFITAHNLVIDGGYT 267
            +A FI    L +DGG  
Sbjct: 230 PQASFIHGSVLFVDGGMD 247

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  188 bits (478), Expect = 2e-58
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR- 64
           +S K   G+ A +TGGA G+G    +     G  + IADI    +D+  A L +   G  
Sbjct: 1   MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE 60

Query: 65  --YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
              +  DV   E  + A     +  G + I+ NNAG+      I   + +D  +LL VNL
Sbjct: 61  VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVNL 119

Query: 123 NGILHGIKHAAKAMIE-----GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           +G+++G+      M+E      Q+ G ++ T+S AA +   +   Y+ +K A+ GL+ S 
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
              L K+ I V+ + P  V S +  +           + + V K   +  + +       
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYASD-DIRPDALKGEVKPVDKTAVERLAGVHEFGMEP 238

Query: 238 EDVAQAAL 245
           + +    +
Sbjct: 239 DVIGARVI 246

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  186 bits (474), Expect = 2e-58
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVT 71
           +L  +V ++TG + G+GAA  ++ A+ GA ++  D+    G   A+ +G   R+ + DVT
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGILHG 128
            E D  +A+  A    G +  + N AG +      G      ++     ++VNL G  + 
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNM 123

Query: 129 IKHAAKAMI-----EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           I+ AA+ M          +G I+ T+S AA  G +   AY+ SK  +  L    A EL +
Sbjct: 124 IRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELAR 183

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIRV  I+P    + M+              P++V   +  S      R    E+ A  
Sbjct: 184 FGIRVVTIAPGIFDTPMMAGM-----------PQDVQDALAAS-VPFPPRLGRAEEYAAL 231

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
              +   E   +    + +DG 
Sbjct: 232 VKHIC--ENTMLNGEVIRLDGA 251

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  187 bits (476), Expect = 3e-58
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYI 66
             L+ +  ++TGG +GIG   A +FA  GA++ +A       +++ + +G         +
Sbjct: 37  FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNG 124
             DV+       A R  V   G LD++  NAGI           M   +   +L VN+ G
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEA---RLDTMTPEQLSEVLDVNVKG 153

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGK 183
            ++ ++     +     +G +I TSS    + G    + Y  SK A +G  R+ A EL  
Sbjct: 154 TVYTVQACLAPLTA-SGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAP 212

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            G+ VN I P  + +E L               EE    +  S  +  G   S  D+   
Sbjct: 213 RGVTVNAILPGNILTEGL-----------VDMGEEYISGMARSIPM--GMLGSPVDIGHL 259

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
           A FLA++EAG+IT   +V+DGG
Sbjct: 260 AAFLATDEAGYITGQAIVVDGG 281

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  185 bits (471), Expect = 4e-58
 Identities = 52/251 (20%), Positives = 85/251 (33%), Gaps = 23/251 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YI 66
           S         + G    IGA  AK FA  G  +       E  A L + I   GGR    
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             D   E++V + +  A      L++   N G       I        + +  +      
Sbjct: 62  SLDARNEDEVTAFLN-AADAHAPLEVTIFNVGA-NVNFPILETTDRVFRKVWEMACWAGF 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              + +A+ M+    +G I  T ++A++ GG    A++ +K  +  +A+S A EL    I
Sbjct: 120 VSGRESARLMLA-HGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 187 RV-NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
            V + I   GV +  +     +  GK  +                         VA A  
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMFGKDALANP--------------DLLMPPAAVAGAYW 224

Query: 246 FLASEEAGFIT 256
            L  +     T
Sbjct: 225 QLYQQPKSAWT 235

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  185 bits (473), Expect = 4e-58
 Identities = 72/285 (25%), Positives = 111/285 (38%), Gaps = 39/285 (13%)

Query: 8   NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG 62
           N+ S +      AVITGGAR IG + A    + G  +V+           L A L +   
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

Query: 63  GR--YIHCDVTKEEDV----ESAVRLAVSWKGQLDIMFNNAGI----------SGSGGSI 106
           G       D++    +    E  +  +    G+ D++ NNA              +G + 
Sbjct: 62  GSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD 121

Query: 107 TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG----QRKGSIICTSSSAAIMGGLASHA 162
                  V  L   N    L  I+  A+   EG     R  S++    +   +       
Sbjct: 122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCV 181

Query: 163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKM 222
           Y+++K A+ GL R+ A EL    IRVN ++P G  S +               P+E  + 
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAP-G-LSLL-----------PPAMPQETQEE 228

Query: 223 VRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            R    L +   AS   +A A  FL S++AG+IT   L +DGG  
Sbjct: 229 YRRKVPLGQ-SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  185 bits (471), Expect = 6e-58
 Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 26/264 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVT 71
            + G VAVITGGA G+G ATA+     GA  V+ D+ +  G A A  +G    +   DVT
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 68

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-----GSITSLNMEDVKFLLSVNLNGIL 126
            E+DV++A+ LA    G++D+  N AGI+ +          +  +ED + +L VNL G  
Sbjct: 69  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 128

Query: 127 HGIKHAAKAMI-----EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           + I+  A  M      +G ++G II T+S AA  G +   AYS SK  I+G+    A +L
Sbjct: 129 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 188

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
              GIRV  I+P    + +L +            PE+VC  +         R     + A
Sbjct: 189 APIGIRVMTIAPGLFGTPLLTSL-----------PEKVCNFLASQ-VPFPSRLGDPAEYA 236

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
                +   E  F+    + +DG 
Sbjct: 237 HLVQAII--ENPFLNGEVIRLDGA 258

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  185 bits (473), Expect = 7e-58
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 21/265 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-----LASTIGGR-- 64
           S RL  + A++TGG  GIG A A  +A  GA + I  +  E   A     L    G +  
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAV 103

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  D++ E    S V  A    G LDI+   AG   +   I  L  E  +   +VN+  
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +    + A   + +G    SII TSS  A         Y+ +K AI+  +R  A ++ + 
Sbjct: 164 LFWITQEAIPLLPKG---ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN ++P  + + + +              +++ +  + +      R+    ++A   
Sbjct: 221 GIRVNIVAPGPIWTALQI--------SGGQTQDKIPQFGQQT---PMKRAGQPAELAPVY 269

Query: 245 LFLASEEAGFITAHNLVIDGGYTTG 269
           ++LAS+E+ ++TA    + GG   G
Sbjct: 270 VYLASQESSYVTAEVHGVCGGEHLG 294

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  184 bits (468), Expect = 8e-58
 Identities = 39/265 (14%), Positives = 88/265 (33%), Gaps = 31/265 (11%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT 71
           +     +  ++ GG   +G+   + F      +   D+++   A+ +  +         T
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMT---DSFT 58

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           ++ D  +A    +    ++D +   AG    G + +    ++   +   ++         
Sbjct: 59  EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 118

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KHGIRVN 189
           A K + EG   G +    + AA+ G      Y ++K A+  L +S A +      G    
Sbjct: 119 ATKHLKEG---GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 175

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            + P  + + M     RK + +AD                       +E + +      +
Sbjct: 176 AVLPVTLDTPMN----RKSMPEADF-----------------SSWTPLEFLVETFHDWIT 214

Query: 250 EEAGFITAHNL--VIDGGYTTGTSS 272
                 +   +  V   G T  T +
Sbjct: 215 GNKRPNSGSLIQVVTTDGKTELTPA 239

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  185 bits (471), Expect = 9e-58
 Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 15/262 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIH 67
                +VA++TG   GIG   A+   + G  + +    +E        +   G       
Sbjct: 18  ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 77

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGI 125
           CDV    ++E+ V   V   G +D++ NNAG  G G    +  + D  +  ++  NL G+
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGV 134

Query: 126 LHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
               K   KA  M+E +  G I+  +S+    G + +  YS SK  ++G  ++   EL +
Sbjct: 135 FRVTKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 193

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI VN + P  V + M  +    Y    ++  EE    +     +  GR     +VA+ 
Sbjct: 194 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI--GRYVQPSEVAEM 251

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             +L    A  +TA  L + GG
Sbjct: 252 VAYLIGPGAAAVTAQALNVCGG 273

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  184 bits (469), Expect = 1e-57
 Identities = 65/267 (24%), Positives = 104/267 (38%), Gaps = 27/267 (10%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-------ADILDELGAALASTIGG 63
               L  KV VI GG + +GA TAK FA    ++V+       +D  ++L   L    G 
Sbjct: 5   KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GA 63

Query: 64  R--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN 121
           +      D++ EE+V      A    G++DI  N  G       I   +  +   + ++N
Sbjct: 64  KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGK-VLKKPIVETSEAEFDAMDTIN 122

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
                  IK AAK M      G II  ++S           Y+ +K  +    R+ + EL
Sbjct: 123 NKVAYFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKEL 179

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
            K  I VN I+P  + +                + +E     +        +   IED+A
Sbjct: 180 MKQQISVNAIAPGPMDTSFF----------YGQETKESTAFHKSQAMG--NQLTKIEDIA 227

Query: 242 QAALFLASEEAGFITAHNLVIDGGYTT 268
               FL + +  +I    +  +GGYTT
Sbjct: 228 PIIKFLTT-DGWWINGQTIFANGGYTT 253

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  184 bits (469), Expect = 1e-57
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 20/261 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YIH 67
            L G+VA++TGG+RG+G   A+  AE G  +V+A        E    L    G       
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CDV+  E+V+  +       G+LD + N AGI           +++ + ++ VNL G  +
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYY 136

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGI 186
             + A   + E     SII   S       + +  AY+ SK  +  L ++ A E G++GI
Sbjct: 137 VCREAFSLLRE-SDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 195

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I+P    ++M           A     E    +     L  GR+   ED+   A+F
Sbjct: 196 RVNVIAPGWYRTKM--TE-------AVFSDPEKLDYMLKRIPL--GRTGVPEDLKGVAVF 244

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LASEEA ++T   + +DGG+T
Sbjct: 245 LASEEAKYVTGQIIFVDGGWT 265

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  184 bits (468), Expect = 3e-57
 Identities = 68/282 (24%), Positives = 99/282 (35%), Gaps = 39/282 (13%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR- 64
               +    AV+TG A+ IG A A    + G  +VI     A+    L   L        
Sbjct: 17  RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTA 76

Query: 65  -YIHCDVTKEE----DVESAVRLAVSWKGQLDIMFNNAGI---------SGSGGSITSLN 110
                D+T         E  +       G+ D++ NNA                S     
Sbjct: 77  VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTV 136

Query: 111 MEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLASHAYSL 165
              V  L+  N           A+              SI+    +      +A   Y++
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNM 196

Query: 166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
            K A++GL +S A EL  +GIRVN ++P G  S +                EE     R 
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAP-G-VSLL-----------PVAMGEEEKDKWRR 243

Query: 226 SGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
              L R R AS E +A A +FL S  A +IT   + +DGG +
Sbjct: 244 KVPLGR-REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  182 bits (463), Expect = 8e-57
 Identities = 60/279 (21%), Positives = 103/279 (36%), Gaps = 60/279 (21%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
            + VI+G A GIGAAT K+    G  IV  DI D              +  D++  E  +
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA------------EVIADLSTAEGRK 49

Query: 78  SAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
            A+  +       +D +   AG+            + +  ++SVN  G    +     A+
Sbjct: 50  QAIADVLAKCSKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPAL 101

Query: 137 IEGQRKGSIICTSSSAAIM----------------------------GGLASHAYSLSKE 168
            +G +  + +  SS A+                                  + AY+ SK 
Sbjct: 102 KKGHQ-PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKN 160

Query: 169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
           A+    R  A   G+ G+R+N I+P    + +L         +A ++     + +     
Sbjct: 161 ALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL---------QAGLQDPRYGESIAKFVP 211

Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            + GR A   ++A    FL S  A ++    +VIDGG  
Sbjct: 212 PM-GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  180 bits (460), Expect = 3e-56
 Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 12/258 (4%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGG---RYIH 67
           + GK+AV+T G+ G+G A+A   A NGA +++       L+   + +AS + G     + 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D+ +  D++     A    G  DI+  + G    G     L +ED      +     + 
Sbjct: 65  GDIREPGDIDRLFEKARDL-GGADILVYSTGGPRPG-RFMELGVEDWDESYRLLARSAVW 122

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + AA+ M+E +  G ++   S   +         ++ +  +IG+ R+ A EL  HG+ 
Sbjct: 123 VGRRAAEQMVE-KGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN + P  + ++ + +   +   ++ +  EE  K +     +  GR    E++A    FL
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM--GRVGKPEELASVVAFL 239

Query: 248 ASEEAGFITAHNLVIDGG 265
           ASE+A FIT   + +DGG
Sbjct: 240 ASEKASFITGAVIPVDGG 257

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  181 bits (461), Expect = 3e-56
 Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS--TIGGRY--IHCD 69
            L G+ AV+TG   GIG A A  +A  GAH++     D +          GG    +  D
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           +   E   +     ++   ++D++ NNAGI  +      +++   + +L+VNL+      
Sbjct: 88  LADLEGAANVAE-ELAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLS 145

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +    AM+     G I+  +S  +  GG    AY+ SK A++GL R+ A E    G+ VN
Sbjct: 146 RSFGTAMLA-HGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAALF 246
            ++P  V +             A ++ ++     R +    R   GR A+ ED+   A+F
Sbjct: 205 ALAPGYVVTAN----------TAALRADD----ERAAEITARIPAGRWATPEDMVGPAVF 250

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS+ A ++    L +DGG+ 
Sbjct: 251 LASDAASYVHGQVLAVDGGWL 271

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  180 bits (460), Expect = 3e-56
 Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 15/262 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGG---RYIH 67
           L GK A++TG   GIG A A      GA+++I     + ++E    + +       + + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D+  E+  +  +        ++DI+ NN GI         +  ED   L  VN+   + 
Sbjct: 68  ADLGTEQGCQDVIEKY----PKVDILINNLGIFEP-VEYFDIPDEDWFKLFEVNIMSGVR 122

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +   K MIE +++G +I  +S AAIM       YS +K   + L+RS A       + 
Sbjct: 123 LTRSYLKKMIE-RKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK--MVRDSGSLLRGRSASIEDVAQAAL 245
           VN I P    +E +            +  EE  K  M  +  + +  R    E++A    
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FL+S  +  I    L IDGG  
Sbjct: 242 FLSSPLSSAINGSALRIDGGLV 263

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  180 bits (459), Expect = 5e-56
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 20/262 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCD 69
            L G++A++TGG+RGIG   A+   E GA + I    A+   +    L++    + I  D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           ++ E       +       +LDI+ NNAG S  G ++ S  +   + ++ +N+  +   I
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 130 KHAAKAMIEG---QRKGSIICTSSSAAIMG-GLASHAYSLSKEAIIGLARSTACELGKHG 185
           +     +      +    +I   S A I   G  ++AY  SK A+  L+R  A EL    
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEH 204

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN I+P   PS M      +++       E     +        GR    E++A  A+
Sbjct: 205 INVNVIAPGRFPSRMT-----RHIANDPQALEADSASI------PMGRWGRPEEMAALAI 253

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
            LA     ++T + + IDGG+ 
Sbjct: 254 SLAGTAGAYMTGNVIPIDGGFH 275

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  180 bits (458), Expect = 6e-56
 Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 27/274 (9%)

Query: 2   EARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAA 56
           E     + ++S  L GK A +TGG+RGIGAA AK  A  GA + +     A+    + + 
Sbjct: 16  ENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE 75

Query: 57  LASTIGGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV 114
           +    GGR   I  D    E +E A+R  V   G LDI+ N+AGI      +    + D 
Sbjct: 76  IEQA-GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI-WHSAPLEETTVADF 133

Query: 115 KFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGL 173
             +++VN       I+ A++ +      G II   S+ A +      + YS SK A+ GL
Sbjct: 134 DEVMAVNFRAPFVAIRSASRHL---GDGGRIITIGSNLAELVPWPGISLYSASKAALAGL 190

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
            +  A +LG  GI VN + P    ++M  N              +  +  R+  +   G 
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTDM--NP----------ADGDHAEAQRERIAT--GS 236

Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
               +D+A    +LA  +  F+T  +L IDGG  
Sbjct: 237 YGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGAN 270

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  179 bits (456), Expect = 1e-55
 Identities = 42/263 (15%), Positives = 87/263 (33%), Gaps = 21/263 (7%)

Query: 3   ARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG 62
            R++        L+    +ITG ++ +G   A    E+G  ++I+   +          G
Sbjct: 13  GRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG 72

Query: 63  GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
              ++ D + E  + + + L  +    L  + +NA    +         ++   + SV++
Sbjct: 73  AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEE--ADNFTRMFSVHM 130

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
                   H    +        I+  S      G     AY  +K  +  L  S A    
Sbjct: 131 LAPYLINLHCEPLLTA-SEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA 189

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
              ++VN I+P  +  +                            +L  G     E + Q
Sbjct: 190 PL-VKVNGIAPALLMFQP-------------KDDAAYRANALAKSAL--GIEPGAEVIYQ 233

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
           +  +L    + ++T   L ++GG
Sbjct: 234 SLRYLLD--STYVTGTTLTVNGG 254

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  177 bits (451), Expect = 4e-55
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           + A++TGG+RGIG A A+     G  + IA    E     A ++G   +  D+ K +D +
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPLPTDLEK-DDPK 58

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
             V+ A+   G L ++ + A ++    ++  L+ E+ + +L ++L+      + AA  M 
Sbjct: 59  GLVKRALEALGGLHVLVHAAAVNVRKPALE-LSYEEWRRVLYLHLDVAFLLAQAAAPHMA 117

Query: 138 EGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLARSTACELGKHGIRVNCISPHG 195
           E    G ++   S      G      AY+ +K A++GL R+ A E  + GIRVN + P  
Sbjct: 118 E-AGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGY 176

Query: 196 VPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI 255
           V +E               +  E+ + +     +  GR A  E++A+ A  L  +EA ++
Sbjct: 177 VETEFT---------LPLRQNPELYEPITARIPM--GRWARPEEIARVAAVLCGDEAEYL 225

Query: 256 TAHNLVIDGGYT 267
           T   + +DGG+ 
Sbjct: 226 TGQAVAVDGGFL 237

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  177 bits (452), Expect = 4e-55
 Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 33/268 (12%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGR--Y 65
           S     + A+IT G +G+G    +     G  + +    D             +  R  +
Sbjct: 2   SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQF 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM------EDVKFLLS 119
           +  DVTK+ED+   V  A+S  G++D + NNA     G  +           ++   ++ 
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNA-----GPYVFERKKLVDYEEDEWNEMIQ 116

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSII--CTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
            NL  + H +K     M + Q  G II      + +  G +   A++ +K  ++ L ++ 
Sbjct: 117 GNLTAVFHLLKLVVPVMRK-QNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTV 175

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A E  ++GI  N + P  +  EM            +   +E  ++   +  +  GRS + 
Sbjct: 176 AYEEAEYGITANMVCPGDIIGEMK-----------EATIQEARQLKEHNTPI--GRSGTG 222

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           ED+A+   FL  +++  IT   + + G 
Sbjct: 223 EDIARTISFLCEDDSDMITGTIIEVTGA 250

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  177 bits (451), Expect = 5e-55
 Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 23/256 (8%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGRYI--HC 68
            + G+V V+TG +RGIG   A    + GA + I     +    +A      GG+ +   C
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNM------EDVKFLLSVN 121
           D ++E +V S   ++    +G+LD++ NNA         T               + +V 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           L G      + A+ M+    +G I+  SS  + +  + +  Y + K A   LA   A EL
Sbjct: 122 LRGHYFCSVYGARLMVP-AGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
            +HG+    + P  V +E+L     K     D   ++       +         + E   
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAE--------TTELSG 231

Query: 242 QAALFLAS-EEAGFIT 256
           +  + LA+      ++
Sbjct: 232 KCVVALATDPNILSLS 247

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  177 bits (452), Expect = 5e-55
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 31/269 (11%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--------- 62
             RL   +A++TG   GIG A +   A  GA +   D+           +G         
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 63  ---GRYIHCDVTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKF-- 116
                    DV++       +    + +     ++ + AGI+        L+M +  +  
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDE---FLLHMSEDDWDK 118

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           +++VNL G     + AA+A++    +GSII  SS    +G +    Y+ SK  +IGL ++
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A ELG+HGIR N + P  + + M               P++V   + +   +  G    
Sbjct: 179 AARELGRHGIRCNSVLPGFIATPMT-----------QKVPQKVVDKITEMIPM--GHLGD 225

Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGG 265
            EDVA    FLASE++G+IT  ++ + GG
Sbjct: 226 PEDVADVVAFLASEDSGYITGTSVEVTGG 254

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  175 bits (447), Expect = 1e-54
 Identities = 53/256 (20%), Positives = 90/256 (35%), Gaps = 36/256 (14%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAH-------IVIADILDELGAALASTI---GGR--Y 65
            + +ITG  +GIG A A  FA    H       +V++         ++      G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           I  D++   DV       V   G +D + NNAG+   G +++ L  ED  + ++ NL G 
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFG-ALSDLTEEDFDYTMNTNLKGT 121

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
               +     M   Q  G I   +S AA      S  Y +SK    GL  +      K  
Sbjct: 122 FFLTQALFALMER-QHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +R+  + P  V + M                +E+           +      ED+A   +
Sbjct: 181 VRITDVQPGAVYTPM-----------WGKVDDEM-----------QALMMMPEDIAAPVV 218

Query: 246 FLASEEAGFITAHNLV 261
               + +  +    ++
Sbjct: 219 QAYLQPSRTVVEEIIL 234

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  176 bits (449), Expect = 3e-54
 Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 23/261 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA-----LASTIGGR-- 64
           S++L GK  +ITGG  GIG A +  FA+ GA+I IA  LDE G A          G +  
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAY-LDEEGDANETKQYVEKEGVKCV 100

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  D++ E+  +  V+  V   G L+I+ NN         +  +  E ++    +N+  
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
             H  K A   +   ++   II T+S  A  G      YS +K AI+   RS +  L + 
Sbjct: 161 YFHVTKAALSHL---KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           GIRVN ++P  + + ++          +    ++V +   +       R     ++A A 
Sbjct: 218 GIRVNGVAPGPIWTPLIP---------SSFDEKKVSQFGSNV---PMQRPGQPYELAPAY 265

Query: 245 LFLASEEAGFITAHNLVIDGG 265
           ++LAS ++ ++T   + ++GG
Sbjct: 266 VYLASSDSSYVTGQMIHVNGG 286

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  174 bits (443), Expect = 6e-54
 Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 32/246 (13%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--- 64
           S      +A+ITG ++GIGA  A   A +G  +V+       L+++   +  +       
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEP 61

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             +  D+T     ++ ++      G +DI+ N A +   G    S  +++ + ++ +N+ 
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG--SLSEPVDNFRKIMEINVI 119

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
                +K   + M   Q+ G I   +S AA  G      Y  +K A++GLA S   EL  
Sbjct: 120 AQYGILKTVTEIMKV-QKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIRV  + P  V ++M   A   +  +  ++P                     +D+   
Sbjct: 179 LGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQP---------------------DDLLNT 217

Query: 244 ALFLAS 249
              L +
Sbjct: 218 IRCLLN 223

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  172 bits (438), Expect = 5e-53
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 30/264 (11%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVT 71
            +   VAV+TGGA G+G AT K   + GA +V+ DI    G  + + +G   R+   DVT
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGILHG 128
            E  V SA+ LA +  G L I+ N AG   +          ++   + ++ +NL G  + 
Sbjct: 63  DEAAVASALDLAETM-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNV 121

Query: 129 IKHAAKAMI-------EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           ++ AA+ +          + +G II T+S AA  G +   AYS SK  ++G+    A +L
Sbjct: 122 LRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDL 181

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
             H IRV  I+P    + +L +            PEE    +         R  + ++  
Sbjct: 182 ASHRIRVMTIAPGLFDTPLLASL-----------PEEARASLGKQ-VPHPSRLGNPDEYG 229

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
             A+ +   E   +    + +DG 
Sbjct: 230 ALAVHII--ENPMLNGEVIRLDGA 251

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  171 bits (435), Expect = 6e-53
 Identities = 43/254 (16%), Positives = 92/254 (36%), Gaps = 30/254 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           ++    ++ GG   +G+A  + F +NG  ++  D+     A     + G   + + T++E
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG---NKNWTEQE 57

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
                   +     Q+D +F  AG    G + +   +++   ++  ++       K A  
Sbjct: 58  QSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT 117

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KHGIRVNCIS 192
            +  G   G +  T ++AA+    +   Y ++K A+  L  S A +         V  I 
Sbjct: 118 HLKPG---GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 174

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + + M     RK++  AD                       +  +++  L   +E +
Sbjct: 175 PVTLDTPMN----RKWMPNADH-----------------SSWTPLSFISEHLLKWTTETS 213

Query: 253 GF-ITAHNLVIDGG 265
               +   L I   
Sbjct: 214 SRPSSGALLKITTE 227

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  170 bits (434), Expect = 1e-52
 Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 29/262 (11%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIG-----GRYIH 67
           +L GK A++TG +RG+G A A      GA+IV+          A A              
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLN 123
            DV   EDVE+ V+ A+   G++DI+ NNAGI+        L +    +D   +L+ NL 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT-----LMLKMSEKDWDDVLNTNLK 116

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
                 K  +K M++ Q+ G II  +S A I+G      Y+ SK  +IG  +S A E   
Sbjct: 117 SAYLCTKAVSKIMLK-QKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GI  N ++P  + ++M            D+ P++V +M  ++  L   R  + E+VA  
Sbjct: 176 KGIYCNAVAPGIIKTDMT-----------DVLPDKVKEMYLNNIPL--KRFGTPEEVANV 222

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
             FLAS+++ +IT   + IDGG
Sbjct: 223 VGFLASDDSNYITGQVINIDGG 244

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  170 bits (434), Expect = 2e-52
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 25/257 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTK 72
           L GKVA++TG +RGIG A A+L AE GA ++     +    A++  +G     +  +VT 
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGILHG 128
            E +E+ ++      G +DI+ NNAGI+        L M    E+   ++  NL  I   
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRDN-----LLMRMKEEEWSDIMETNLTSIFRL 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            K   + M++ +R+G II   S    MG      Y+ +K  +IG  +S A E+   G+ V
Sbjct: 122 SKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 180

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + ++M                +E             GR     ++A A  FLA
Sbjct: 181 NTVAPGFIETDM-----------TKALNDEQRTATLAQVPA--GRLGDPREIASAVAFLA 227

Query: 249 SEEAGFITAHNLVIDGG 265
           S EA +IT   L ++GG
Sbjct: 228 SPEAAYITGETLHVNGG 244

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  171 bits (436), Expect = 2e-52
 Identities = 64/297 (21%), Positives = 99/297 (33%), Gaps = 56/297 (18%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR--Y 65
              T  VA++TG A+ +G + A+     G  + +     A   + L A L +        
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  IHCDVTKEED-----------------VESAVRLAVSWKGQLDIMFNNAGIS-------- 100
           +  D++                         V    +  G+ D++ NNA           
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 101 -----GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSS 150
                                L   N       IK  A  +            SII    
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
           +      L    Y+++K A+ GL RS A EL    IRVN + P G  S +          
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL---------- 232

Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             D  P  V +  R    L   R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 233 -VDDMPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  172 bits (437), Expect = 3e-52
 Identities = 64/297 (21%), Positives = 99/297 (33%), Gaps = 56/297 (18%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR--Y 65
              T  VA++TG A+ +G + A+     G  + +     A   + L A L +        
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 66  IHCDVTKEED-----------------VESAVRLAVSWKGQLDIMFNNAGIS-------- 100
           +  D++                         V    +  G+ D++ NNA           
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 101 -----GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSS 150
                                L   N       IK  A  +            SII    
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG 210
           +      L    Y+++K A+ GL RS A EL    IRVN + P G  S +          
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL---------- 269

Query: 211 KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             D  P  V +  R    L   R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 270 -VDDMPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  168 bits (429), Expect = 1e-51
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 28/274 (10%)

Query: 1   MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST 60
           +EA+        K L  +VA++TG +RGIG A A   A  GA ++     +     + + 
Sbjct: 12  LEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA 71

Query: 61  IG-----GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM---- 111
                  GR    +V     V++ V   +   G L+++ NNAGI+        L M    
Sbjct: 72  FKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQ-----LAMRMKD 126

Query: 112 EDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII 171
           ++   ++  NL  +    +   + M++  R G I+  +S     G      Y+ +K  + 
Sbjct: 127 DEWDAVIDTNLKAVFRLSRAVLRPMMK-ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVA 185

Query: 172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR 231
           G+ R+ A E+G  GI VNC++P  + ++M               P+E    ++    L  
Sbjct: 186 GMTRALAREIGSRGITVNCVAPGFIDTDMT-----------KGLPQEQQTALKTQIPL-- 232

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           GR  S ED+A A  FLAS +AG+IT   L ++GG
Sbjct: 233 GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  168 bits (427), Expect = 2e-51
 Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 29/268 (10%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGR- 64
           ++  L GKVA++TG +RGIG A AK  A +GA + I      +  +E    + S  GG  
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSA 59

Query: 65  -YIHCDVTKEEDVESAVRLAV------SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL 117
             I  ++     VE+            +   + DI+ NNAGI G G  I     +    +
Sbjct: 60  FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRM 118

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           +SVN       I+ A   +   +    II  SS+A  +      AYS++K AI  +  + 
Sbjct: 119 VSVNAKAPFFIIQQALSRL---RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTL 175

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A +LG  GI VN I P  V ++M             +    + +      +    R   +
Sbjct: 176 AKQLGARGITVNAILPGFVKTDM---------NAELLSDPMMKQYATTISAF--NRLGEV 224

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           ED+A  A FLAS ++ ++T   + + GG
Sbjct: 225 EDIADTAAFLASPDSRWVTGQLIDVSGG 252

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  169 bits (430), Expect = 2e-51
 Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 28/262 (10%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIH 67
                KVA++TG  RGIG   AK+ A++ +H++      +   ++   I   G       
Sbjct: 40  YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLN 123
            DV+K+E++   +   ++    +DI+ NNAGI+        L +    ++ + +L  NLN
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDN-----LFLRMKNDEWEDVLRTNLN 154

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
            + +  +  +K MI   R G II  SS   + G +    YS SK  +IG  +S A EL  
Sbjct: 155 SLFYITQPISKRMIN-NRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 213

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             I VN I+P  + S+M            D   E++ K +  +     GR  + E+VA  
Sbjct: 214 RNITVNAIAPGFISSDMT-----------DKISEQIKKNIISNIPA--GRMGTPEEVANL 260

Query: 244 ALFLASEEAGFITAHNLVIDGG 265
           A FL+S+++G+I     VIDGG
Sbjct: 261 ACFLSSDKSGYINGRVFVIDGG 282

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  168 bits (428), Expect = 2e-51
 Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 14/220 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YI 66
           K +TG++ +ITG   GIG  TA  FA+  + +V+ DI    L+E  AA    +G +    
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET-AAKCKGLGAKVHTF 85

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             D +  ED+ S+ +   +  G + I+ NNAG+      + +     ++    VN+    
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHF 144

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL---GK 183
              K    AM +    G I+  +S+A  +      AY  SK A +G  ++   EL     
Sbjct: 145 WTTKAFLPAMTK-NNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
            G++  C+ P+ V +  + N          ++PEEV   +
Sbjct: 204 TGVKTTCLCPNFVNTGFIKNPSTSLGPT--LEPEEVVNRL 241

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  168 bits (428), Expect = 3e-51
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 11/223 (4%)

Query: 9   KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR 64
           +   + L GK  ++TG ++GIG   A   A+ GAH+V+       L ++ +         
Sbjct: 20  EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS 79

Query: 65  --YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
             YI   +      E  V  A    G LD++  N   + +  ++   ++  V+  + VN 
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNF 138

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
              +     AA  M++ Q  GSI+  SS A  +      AYS SK A+ G   S   E  
Sbjct: 139 LSYVVLTV-AALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 196

Query: 183 --KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
             +  + +       + +E  + A    +       EE    +
Sbjct: 197 VSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEI 239

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  167 bits (425), Expect = 3e-51
 Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 29/261 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG-GRYIHC 68
           L GKVA++TG +RGIG A A   A+ GA++V+         +E+   +         +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNG 124
           DV   EDV + V+  V   GQ+DI+ NNAG++        L M    E+   +++ NL G
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDN-----LLMRMKEEEWDTVINTNLKG 116

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +    K  ++ M+  QR G I+  +S   + G      Y  +K  +IGL +++A EL   
Sbjct: 117 VFLCTKAVSRFMMR-QRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASR 175

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            I VN I+P  + ++M            D+  E +   +         +    +D+A A 
Sbjct: 176 NITVNAIAPGFIATDMT-----------DVLDENIKAEMLKLIPA--AQFGEAQDIANAV 222

Query: 245 LFLASEEAGFITAHNLVIDGG 265
            F AS+++ +IT   L +DGG
Sbjct: 223 TFFASDQSKYITGQTLNVDGG 243

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  167 bits (424), Expect = 3e-51
 Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 30/256 (11%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           + A++TGGA G+G A A      G  +V+ D+  E            Y+  DVT+EEDV 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDL-------IYVEGDVTREEDVR 55

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
            AV  A      L  + + AG+  +    G      +E  + +L VNL G  + ++ AA 
Sbjct: 56  RAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW 114

Query: 135 AMI-----EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           AM         ++G I+ T+S AA  G +   AY+ SK  ++ L    A EL   GIRV 
Sbjct: 115 AMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVV 174

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            ++P    + +L            +  +    +          R    E+ A   L +  
Sbjct: 175 TVAPGLFDTPLL----------QGLPEKAKASLAAQ--VPFPPRLGRPEEYAALVLHIL- 221

Query: 250 EEAGFITAHNLVIDGG 265
            E   +    + +DG 
Sbjct: 222 -ENPMLNGEVVRLDGA 236

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  166 bits (424), Expect = 4e-51
 Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 27/237 (11%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
                  +ITG +RGIG ATA+L    G  + +    ++   ALA+ + G   +  DV +
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVRE 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E D   AV       G+L  + NNAG+ G    +  L +E+ + +L  NL G   GI+HA
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGV-GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
             A++  +  G+I+   S A         AY+ SK  ++GLA +   +L +  +RV  + 
Sbjct: 121 VPALLR-RGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL 179

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
           P  V +    N          +KP                     EDVAQA LF   
Sbjct: 180 PGSVDTGFAGNTPG---QAWKLKP---------------------EDVAQAVLFALE 212

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  166 bits (424), Expect = 5e-51
 Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALAST-IGGRYIHC 68
              K A++TG +RGIG + A   AE G ++ +      +  + +   + +  +    I  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGIL 126
           +V   ++V++ ++  VS  G LD++ NNAGI+        + M++ ++  ++  NL G+ 
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDN---LLMRMKEQEWDDVIDTNLKGVF 118

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
           + I+ A   M+  QR G+II  SS    +G      Y  +K  +IGL +S A EL   GI
Sbjct: 119 NCIQKATPQMLR-QRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 177

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            VN ++P  + S+M            D   +E+ + +     L   R     D+A    F
Sbjct: 178 TVNAVAPGFIVSDMT-----------DALSDELKEQMLTQIPL--ARFGQDTDIANTVAF 224

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS++A +IT   + ++GG
Sbjct: 225 LASDKAKYITGQTIHVNGG 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  166 bits (424), Expect = 5e-51
 Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 29/264 (10%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGR--Y 65
             +L GKV+++TG  RGIG A A+  A  G+ ++I     +    +   +A+  G +   
Sbjct: 2   EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVN 121
           +  ++  EE +  A     +    +DI+ NNAGI+        L +     D + +L VN
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDK-----LFLRMSLLDWEEVLKVN 116

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL 181
           L G     +++ + MI+ QR G I+  SS     G +    YS +K  +IG  +S A EL
Sbjct: 117 LTGTFLVTQNSLRKMIK-QRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175

Query: 182 GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA 241
               + VN ++P  + ++M             +  EE+ +  ++   L  GR  S E+VA
Sbjct: 176 APRNVLVNAVAPGFIETDM-----------TAVLSEEIKQKYKEQIPL--GRFGSPEEVA 222

Query: 242 QAALFLASEEAGFITAHNLVIDGG 265
              LFL SE A +IT   + ++GG
Sbjct: 223 NVVLFLCSELASYITGEVIHVNGG 246

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  167 bits (425), Expect = 5e-51
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 25/259 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDV 70
            +LTG+ A++TG   GIG A A+ F   GA + +    ++    +A+ +G        ++
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL 82

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGIL 126
           +  + ++    +A      +DI+ NNAGI+  G     L +    +D   +L+VNL    
Sbjct: 83  SDRKSIKQLAEVAEREMEGIDILVNNAGITRDG-----LFVRMQDQDWDDVLAVNLTAAS 137

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
              +    +M+  +R G II  +S   ++G      Y  +K  +IG +++ A E+    I
Sbjct: 138 TLTRELIHSMMR-RRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNI 196

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
            VNCI+P  + S M            D   E+  + +     +   R    E++A A ++
Sbjct: 197 TVNCIAPGFIKSAM-----------TDKLNEKQKEAIMAMIPM--KRMGIGEEIAFATVY 243

Query: 247 LASEEAGFITAHNLVIDGG 265
           LAS+EA ++T   L I+GG
Sbjct: 244 LASDEAAYLTGQTLHINGG 262

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  166 bits (423), Expect = 6e-51
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 9/215 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
            L  K+AV+TG   G+G    K  + +     +    + L AALA   G   I  D+ KE
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEGVEPIESDIVKE 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
              E  V    +    +D + + A ++    +I + ++ +    L +N+       +   
Sbjct: 61  VLEEGGVDKLKNL-DHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLL 118

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
            A+      G +I  +S A       +  Y+ SK A+ GLA +   E   +GIRV+ +SP
Sbjct: 119 PALR--AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSP 176

Query: 194 HGVPSEMLVN----AYRKYLGKADMKPEEVCKMVR 224
               + ML          +  +  ++P+E+   +R
Sbjct: 177 GPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIR 211

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  165 bits (421), Expect = 1e-50
 Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 25/263 (9%)

Query: 5   DDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR 64
               + +      +  ++TGG RGIG A A+  A +G  + +          L       
Sbjct: 3   ATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG----- 57

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNL 122
            +  DVT  + V+ A       +G ++++ +NAG+S        + M + KF  +++ NL
Sbjct: 58  -VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA---FLMRMTEEKFEKVINANL 113

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
            G     + A+++M    + G +I   S + + G      Y+ SK  +IG+ARS A EL 
Sbjct: 114 TGAFRVAQRASRSMQR-NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 172

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           K  +  N ++P  + ++M                E + +           R  +  +VA 
Sbjct: 173 KANVTANVVAPGYIDTDM-----------TRALDERIQQGALQFIPA--KRVGTPAEVAG 219

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
              FLASE+A +I+   + +DGG
Sbjct: 220 VVSFLASEDASYISGAVIPVDGG 242

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  171 bits (435), Expect = 1e-50
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 22/258 (8%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI--LDELGAALASTIGGRYIHCDV 70
           K L GKVAV+TG ARGIGA  A++FA +GA +V  D+    E    +A  +GG  +  DV
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDV 268

Query: 71  TKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGILH 127
           T ++ V+           G++DI+ NNAGI+         NM++ ++  +++VNL     
Sbjct: 269 TADDAVDKITAHVTEHHGGKVDILVNNAGITRDK---LLANMDEKRWDAVIAVNLLAPQR 325

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             +            G +I  SS A I G      Y+ +K  +IGLA + A  L   GI 
Sbjct: 326 LTEGLVGNGTI-GEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGIT 384

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           +N ++P  + ++M             + P    ++ R   SL +G      DVA+   + 
Sbjct: 385 INAVAPGFIETKMT----------EAI-PLATREVGRRLNSLFQGGQP--VDVAELIAYF 431

Query: 248 ASEEAGFITAHNLVIDGG 265
           AS  +  +T + + + G 
Sbjct: 432 ASPASNAVTGNTIRVCGQ 449

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  165 bits (421), Expect = 2e-50
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 29/268 (10%)

Query: 2   EARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI 61
                ++ L  +    +  ++TGG RGIG A A+ FA+ G  + I     E      +  
Sbjct: 6   HHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA-- 63

Query: 62  GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFL 117
               + CD+T  E VE A +      G ++++  NAG++        L M    ED   +
Sbjct: 64  ----VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQ-----LLMRMSEEDFTSV 114

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           +  NL G    +K A +AM+   +KG ++  SS   ++G      Y+ SK  ++G ARS 
Sbjct: 115 VETNLTGTFRVVKRANRAMLR-AKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A ELG   I  N ++P  V ++M             +  +E    +     L  GR A  
Sbjct: 174 ARELGSRNITFNVVAPGFVDTDM-----------TKVLTDEQRANIVSQVPL--GRYARP 220

Query: 238 EDVAQAALFLASEEAGFITAHNLVIDGG 265
           E++A    FLAS++A +IT   + +DGG
Sbjct: 221 EEIAATVRFLASDDASYITGAVIPVDGG 248

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  164 bits (418), Expect = 4e-50
 Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIHCD 69
           L  KVA++TG +RGIG   A   A  GA +V             +++       R +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGI 125
           ++  E +++      +    +DI+ NNAGI+        L M    ++ + +++ NL+ I
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRDN-----LMMRMSEDEWQSVINTNLSSI 117

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
               K   + M++ +R G II   S     G      Y  +K  +IG ++S A E+    
Sbjct: 118 FRMSKECVRGMMK-KRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN ++P  + ++M            D   +E    +        G+    +D+A A  
Sbjct: 177 ITVNVVAPGFIATDM-----------TDKLTDEQKSFIATKIPS--GQIGEPKDIAAAVA 223

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FLASEEA +IT   L ++GG
Sbjct: 224 FLASEEAKYITGQTLHVNGG 243

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  163 bits (415), Expect = 1e-49
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 25/260 (9%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGRY--IH 67
            ++ ++A +TGG  GIG +  +   ++G  +V     +             +G  +    
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF--LLSVNLNGI 125
            +V   +  + A     +  G++D++ NNAGI+          M    +  ++  NL  +
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV---VFRKMTREDWQAVIDTNLTSL 126

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
            +  K     M+E +  G II  SS     G      YS +K  I G   S A E+   G
Sbjct: 127 FNVTKQVIDGMVE-RGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKG 185

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           + VN +SP  + ++M+                +V + +  +  +   R  S +++     
Sbjct: 186 VTVNTVSPGYIGTDMV-----------KAIRPDVLEKIVATIPV--RRLGSPDEIGSIVA 232

Query: 246 FLASEEAGFITAHNLVIDGG 265
           +LASEE+GF T  +  ++GG
Sbjct: 233 WLASEESGFSTGADFSLNGG 252

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  162 bits (413), Expect = 2e-49
 Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 29/257 (11%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTK 72
           LTGK ++ITG + GIG+A A+L  + G+ ++I+   +E   +L + +   Y    C++  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGILHG 128
           +E+  + +         LDI+  NAGI+        L +    +D   ++ +NL      
Sbjct: 72  KEECSNLISKT----SNLDILVCNAGITSDT-----LAIRMKDQDFDKVIDINLKANFIL 122

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A K MI+ +R G II  SS   I G      Y  SK  +IG+ +S + E+   GI V
Sbjct: 123 NREAIKKMIQ-KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + S+M            D   E+  + +     L  G     EDVA A  FLA
Sbjct: 182 NAVAPGFIKSDM-----------TDKLNEKQREAIVQKIPL--GTYGIPEDVAYAVAFLA 228

Query: 249 SEEAGFITAHNLVIDGG 265
           S  A +IT   L ++GG
Sbjct: 229 SNNASYITGQTLHVNGG 245

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  164 bits (417), Expect = 5e-49
 Identities = 62/271 (22%), Positives = 101/271 (37%), Gaps = 39/271 (14%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------- 61
            ++ RL G    ITG +RGIG A A   A++GA+IVIA    +    L  TI        
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97

Query: 62  --GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL 117
             GG+      DV  E+ + +AV  A+   G +DI+ NNA    S  +      + +  +
Sbjct: 98  AVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLM 156

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH--AYSLSKEAIIGLAR 175
           ++VN  G     K     + +  +   I+  S    +         AY+++K  +     
Sbjct: 157 MNVNTRGTYLASKACIPYLKK-SKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
             A E  K  I VN + P        ++                       G  +  +  
Sbjct: 216 GMAEEF-KGEIAVNALWPKTAIHTAAMDML--------------------GGPGIESQCR 254

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            ++ +A AA  +  +   F    N VID   
Sbjct: 255 KVDIIADAAYSIFQKPKSF--TGNFVIDENI 283

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  161 bits (411), Expect = 7e-49
 Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 30/276 (10%)

Query: 1   MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGA 55
           M   +   +        +VA +TGG  G+GAA ++   + G  + +      D +     
Sbjct: 9   MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68

Query: 56  ALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDV 114
                    +    DV   E  E      ++  G++D++ NNAGI+      T + M   
Sbjct: 69  HERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDA---TFMKMTKG 125

Query: 115 KF--LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG 172
            +  ++  +L+ + +  K     M+E +R G I+   S     G      Y+ +K  I G
Sbjct: 126 DWDAVMRTDLDAMFNVTKQFIAGMVE-RRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG 184

Query: 173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR- 231
             ++ A E  K GI VN +SP  + + M+           +  P++    V ++  L + 
Sbjct: 185 FTKTLALETAKRGITVNTVSPGYLATAMV-----------EAVPQD----VLEAKILPQI 229

Query: 232 --GRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
             GR    ++VA    FL S++AGF+T  +L I+GG
Sbjct: 230 PVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  160 bits (408), Expect = 9e-49
 Identities = 78/260 (30%), Positives = 119/260 (45%), Gaps = 32/260 (12%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIGGRYIH---CD 69
           + A+ITG +RGIG A A   AE+G  + I      +  +E+        G   +     +
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGAN 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGI 125
           + + E   + V  A    G LD + NNAGI+        L +    ED + +L  NL+ +
Sbjct: 61  LLEAEAATALVHQAAEVLGGLDTLVNNAGITRDT-----LLVRMKDEDWEAVLEANLSAV 115

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
               + A K M++  R G I+  +S   I+G      Y  SK  +IG  R+ A E  + G
Sbjct: 116 FRTTREAVKLMMK-ARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRG 174

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           I VN ++P  + +EM            +  P+EV +          GR    E+VA+A  
Sbjct: 175 ITVNAVAPGFIETEM-----------TERLPQEVKEAYLKQIPA--GRFGRPEEVAEAVA 221

Query: 246 FLASEEAGFITAHNLVIDGG 265
           FL SE+AG+IT   L +DGG
Sbjct: 222 FLVSEKAGYITGQTLCVDGG 241

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  159 bits (405), Expect = 7e-48
 Identities = 83/269 (30%), Positives = 139/269 (51%), Gaps = 33/269 (12%)

Query: 8   NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG 62
           + +++  LT ++A++TG +RGIG A A   A  GA + +     A   DE+ AA+A+  G
Sbjct: 19  SHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG 78

Query: 63  -GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFL 117
               +  DV++E +VE+     +   G+LD++ NNAGI+        L +    +D + +
Sbjct: 79  EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT-----LLLRMKRDDWQSV 133

Query: 118 LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST 177
           L +NL G+    + AAK M++ QR G II  +S    MG      YS +K  +IGL ++ 
Sbjct: 134 LDLNLGGVFLCSRAAAKIMLK-QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTV 192

Query: 178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI 237
           A EL   GI VN ++P  + ++M           +++  E++ +++     L  GR    
Sbjct: 193 AKELASRGITVNAVAPGFIATDMT----------SELAAEKLLEVI----PL--GRYGEA 236

Query: 238 EDVAQAALFLASE-EAGFITAHNLVIDGG 265
            +VA    FLA++  A +IT   + IDGG
Sbjct: 237 AEVAGVVRFLAADPAAAYITGQVINIDGG 265

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  158 bits (401), Expect = 1e-47
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 30/259 (11%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI-----ADILDELGAALASTIG-GRYIHCDVT 71
            V V+TG +RGIG A A    + G  +++     A   +E+   + +  G       DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNM----EDVKFLLSVNLNGILH 127
           KE DVE+ ++ A+   G +D++ NNAGI+        L +         ++ +NL G+  
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDT-----LLIRMKKSQWDEVIDLNLTGVFL 116

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
             + A K M++ +RKG II  +S   ++G +    Y+ +K  +IG +++ A E     I 
Sbjct: 117 CTQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNIN 175

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN + P  + S+M                E++ K +  +  L  GR+   E+VA    FL
Sbjct: 176 VNVVCPGFIASDMT-----------AKLGEDMEKKILGTIPL--GRTGQPENVAGLVEFL 222

Query: 248 A-SEEAGFITAHNLVIDGG 265
           A S  A +IT     IDGG
Sbjct: 223 ALSPAASYITGQAFTIDGG 241

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  156 bits (397), Expect = 6e-47
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 28/258 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           +  K  ++   +RGIG A A + ++ GA + I          L    G RY+ CD+ K+ 
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHRYVVCDLRKDL 72

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
           D+            ++DI+  NAG     G    L  ED K  +      ++  +++   
Sbjct: 73  DL------LFEKVKEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP 125

Query: 135 AMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           AM E +  G I+  +S + I     L +   + ++ A+ G  ++ + E+  +GI VNC++
Sbjct: 126 AMKE-KGWGRIVAITSFSVISPIENLYT--SNSARMALTGFLKTLSFEVAPYGITVNCVA 182

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P    +E +           ++  EE  K V     +   R A  E++A    FL SE+A
Sbjct: 183 PGWTETERV----------KELLSEEKKKQVESQIPM--RRMAKPEEIASVVAFLCSEKA 230

Query: 253 GFITAHNLVIDGGYTTGT 270
            ++T   +V+DGG +   
Sbjct: 231 SYLTGQTIVVDGGLSKFP 248

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  153 bits (389), Expect = 9e-46
 Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 30/269 (11%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAE---NGAHIVI----ADILDELGAALASTIGG- 63
           +  L   V V+TG +RG G A A   A     G+ +++      +L +L   L +     
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 64  --RYIHCDVTKEEDVESAVRLAVSWKG----QLDIMFNNAGISG--SGGSITSLNMEDVK 115
                  D+  E  V+  +            Q  ++ NNA   G  S G +   ++ +V 
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 FLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA 174
              ++NL  +L        A  +      +++  SS  A+        Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS 234
           +  A E  +  +RV   +P  + ++M   A          K  E+   ++   S   G  
Sbjct: 181 QVLAAE--EPSVRVLSYAPGPLDNDMQQLAR------ETSKDPELRSKLQKLKSD--GAL 230

Query: 235 ASIEDVAQAALFLASEEAGFITAHNLVID 263
                 AQ  L L  ++  F +     +D
Sbjct: 231 VDCGTSAQKLLGLLQKDT-FQSGA--HVD 256

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  151 bits (383), Expect = 4e-45
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 11/209 (5%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHCDV 70
            KVAVITG +RGIG A A+  A +G  + +     D L+++   L    G    Y H DV
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           +K E VE   +  +   G +D++  NAG+ G    +  L+ E+   ++ VNL G+   +K
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
               ++      G  + T+S  +         Y  +K A   L R+   E     +R   
Sbjct: 121 AFLDSLKR--TGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFE 176

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEV 219
           + P  V +    +   K   K  +KP+E+
Sbjct: 177 LRPGAVDTYFGGSKPGKPKEKGYLKPDEI 205

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  151 bits (384), Expect = 3e-44
 Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 38/272 (13%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------ 61
            + G+V ++TG   GIG A A  FA  GA +V+ DI   L  + AS              
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 62  -GGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLL 118
            GG  +    +V   +     ++ AV   G LD++ NNAGI      I + + E+   ++
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RMIANTSEEEFDAVI 142

Query: 119 SVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
           +V+L G    ++HAA              G II TSS A + G +    YS +K  I  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
               A E+G++G+ VN I+P    + M             +  E +    +         
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP-SARTRMT----------ETVFAEMMATQDQ------DFD 245

Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
           + + E+V+   ++L S EA  +T     ++GG
Sbjct: 246 AMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  146 bits (370), Expect = 3e-43
 Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 12/210 (5%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVI----ADILDELGAALASTIGGRYIHCDVTKE 73
            + VITG + G+GA  AKL+   G    +       L  +   L++ +G  Y   D+   
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVG--YRARDLASH 59

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           ++VE               + ++AG  G  G +   + E ++ L+  NL+  ++ ++   
Sbjct: 60  QEVEQLFE---QLDSIPSTVVHSAGS-GYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           K   +  +  +++   S+AA         Y   K A+ GL  S   EL    +++  + P
Sbjct: 116 KRYKD--QPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMV 223
            G+ +E    + +     + M  E+   M+
Sbjct: 174 GGMATEFWETSGKSLDTSSFMSAEDAALMI 203

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  152 bits (386), Expect = 2e-42
 Identities = 69/270 (25%), Positives = 112/270 (41%), Gaps = 43/270 (15%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------- 61
           S      KV +ITG   G+G   +  FA+ GA +V+ D+   L     ++          
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 62  ---GGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF 116
              GG  +  + +V    D +  V  AV   G + ++ NNAGI     S+  +  +D K 
Sbjct: 62  VKNGGVAVADYNNVL---DGDKIVETAVKNFGTVHVIINNAGILRDA-SMKKMTEKDYKL 117

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           ++ V+LNG     K A     + Q+ G I+ TSS A + G      Y+ +K A++G A +
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQK-QKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAET 176

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
            A E  K+ I+ N I+P    S M             + P  + + +             
Sbjct: 177 LAKEGAKYNIKANAIAPLAR-SRMT----------ESIMPPPMLEKL------------G 213

Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            E VA   L+L+S E   +T     +  G+
Sbjct: 214 PEKVAPLVLYLSSAENE-LTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  141 bits (357), Expect = 1e-38
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 41/271 (15%)

Query: 4   RDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI------LDELGAAL 57
            +D +   +  L  KV +ITG   G+G   AK FA+ GA +V+ D       +DE+ AA 
Sbjct: 309 ANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA- 367

Query: 58  ASTIGGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK 115
               GG       DV   +D E+ ++  +   G +DI+ NNAGI     S   ++ ++  
Sbjct: 368 ----GGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDR-SFAKMSKQEWD 420

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR 175
            +  V+L G  +  + A    +E ++ G II  +S++ I G      YS SK  I+GL++
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVE-KQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSK 479

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           + A E  K+ I+VN ++PH   + M ++  R+                            
Sbjct: 480 TMAIEGAKNNIKVNIVAPHAE-TAMTLSIMREQDKNL-YHA------------------- 518

Query: 236 SIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             + VA   ++L +++   +T     I GG+
Sbjct: 519 --DQVAPLLVYLGTDDVP-VTGETFEIGGGW 546

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  145 bits (369), Expect = 2e-42
 Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 26/249 (10%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAAL-ASTIGGR--Y 65
           +R   ++A++TG + GIGAA A+   + G  +V        ++EL A   ++   G    
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 87

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
             CD++ EED+ S      S    +DI  NNAG++    ++ S +    K + +VN+  +
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLAL 146

Query: 126 LHGIKHAAKAMIE-GQRKGSIICTSSSAA--IMGGLASHAYSLSKEAIIGLARSTACELG 182
               + A ++M E     G II  +S +   ++    +H YS +K A+  L      EL 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206

Query: 183 --KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
             +  IR  CISP  V ++     +       D  PE+          L        EDV
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLH-------DKDPEKAAATYEQMKCL------KPEDV 253

Query: 241 AQAALFLAS 249
           A+A +++ S
Sbjct: 254 AEAVIYVLS 262

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  146 bits (371), Expect = 2e-42
 Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 43/270 (15%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------- 61
           S  R  G+V ++TG   G+G A A  FAE GA +V+ D+  +       +          
Sbjct: 3   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI 62

Query: 62  ---GGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF 116
              GG+ +  +  V   E  E  V+ A+   G++D++ NNAGI     S + ++ ED   
Sbjct: 63  RRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDR-SFSRISDEDWDI 118

Query: 117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
           +  V+L G     + A   M + Q  G II T+S++ I G      YS +K  ++GLA +
Sbjct: 119 IQRVHLRGSFQVTRAAWDHMKK-QNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANT 177

Query: 177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS 236
              E  K+ I  N I+P+   S M             + PE++ + ++            
Sbjct: 178 LVIEGRKNNIHCNTIAPNAG-SRMT----------ETVMPEDLVEALKP----------- 215

Query: 237 IEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            E VA   L+L  E           +  G+
Sbjct: 216 -EYVAPLVLWLCHESCE-ENGGLFEVGAGW 243

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  141 bits (357), Expect = 4e-41
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 10/196 (5%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--Y 65
              L GKVA+ITG + GIG ATA+  A  GA + IA    + L  LG  L +  G +   
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHV 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  DV   + V++AV   V   G LDI+ NNAGI    G +   +  D   ++  NL G+
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLL-GPVEDADTTDWTRMIDTNLLGL 119

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
           ++  + A   ++    KG+++  SS A  +    +  Y  +K  +   + +   E+ + G
Sbjct: 120 MYMTRAALPHLLRS--KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG 177

Query: 186 IRVNCISPHGVPSEML 201
           +RV  I P    +E+ 
Sbjct: 178 VRVVVIEPGTTDTELR 193

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  141 bits (358), Expect = 5e-41
 Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 25/241 (10%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHC 68
           +  KV +ITG + GIG   A+     GA I++       ++ +   +    GG       
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVL 60

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DVT    V +  + AV   G++D++ NNAG+      + ++ +++ + ++ VN+ G+L G
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL-SPLAAVKVDEWERMIDVNIKGVLWG 119

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
           I      M   QR G II   S  A+     +  Y  +K A+  ++     E     IRV
Sbjct: 120 IGAVLPIMEA-QRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRV 176

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
            C++P  V SE+      +    A                  R  +    D+A+A   + 
Sbjct: 177 TCVNPGVVESELAGTITHEETMAAM--------------DTYRAIALQPADIARAVRQVI 222

Query: 249 S 249
            
Sbjct: 223 E 223

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  140 bits (354), Expect = 2e-40
 Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 24/243 (9%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGRYIH 67
            +    K+ VITG + GIG A A+ F+E G  +++     + L  L              
Sbjct: 11  GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNT-----LCAQ 65

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DVT +   ++A+  A    G  D + NNAG+    G I +    + + +  VN+ G+L+
Sbjct: 66  VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLN 124

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G++     M   +  G+II  SS A         AY  +K A+  ++ +   E+    +R
Sbjct: 125 GMQAVLAPMKA-RNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVR 183

Query: 188 VNCISPHGVPSEML-VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           V  I+P  V +E+L     ++     D           D G +L       +DVA+A LF
Sbjct: 184 VMTIAPSAVKTELLSHTTSQQIKDGYD-------AWRVDMGGVLAA-----DDVARAVLF 231

Query: 247 LAS 249
              
Sbjct: 232 AYQ 234

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  137 bits (347), Expect = 2e-39
 Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 17/247 (6%)

Query: 7   TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIG 62
           +  +           ITG   G G A A+ FAE G  +V+     + L  L   L++   
Sbjct: 11  SGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTR 70

Query: 63  GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNL 122
              +  DV     + +AV         L  + NNAG++       S +++D   ++  N+
Sbjct: 71  VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI 130

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
            G+L+  +     +I      SI+   S A       SH Y  +K  +   + +  C+L 
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ 190

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
             G+RV  + P    SE  +  +     + D       K    +  +        ED+A+
Sbjct: 191 GTGVRVTNLEPGLCESEFSLVRFGGDQARYD-------KTYAGAHPI------QPEDIAE 237

Query: 243 AALFLAS 249
              ++ +
Sbjct: 238 TIFWIMN 244

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  134 bits (340), Expect = 5e-39
 Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 26/187 (13%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--IHCDVTKE 73
                ++ G +  +G+A  +   +  A ++ A              G     +  D+T  
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEK-KAEVITA--------------GRHSGDVTVDITNI 46

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           + ++          G++D + +  G   +   +T L  E     +S  L G ++ +    
Sbjct: 47  DSIKKMYEQV----GKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGGQINLVLLGI 101

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
            ++ +    GS   T+        +   + +++  A+   A+S A E+ + GIR+N +SP
Sbjct: 102 DSLNDK---GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157

Query: 194 HGVPSEM 200
           + +    
Sbjct: 158 NVLEESW 164

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  140 bits (355), Expect = 3e-38
 Identities = 67/267 (25%), Positives = 105/267 (39%), Gaps = 43/267 (16%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------ 61
           R  G+VAV+TG   G+G   A LFAE GA +V+ D+        AS              
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 62  GGRYI--HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
           GG  +  +  V    D    +  A+   G++DI+ NNAGI     S+   + +D   +  
Sbjct: 76  GGEAVADYNSVI---DGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVND 131

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTAC 179
           V+L G     + A   M + Q  G II TSS++ I G      Y+ +K  +IGLA + A 
Sbjct: 132 VHLKGSFKCTQAAFPYMKK-QNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAI 190

Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           E  ++ +  N I P    S M             + P+ +   +              + 
Sbjct: 191 EGARNNVLCNVIVPTAA-SRMT----------EGILPDILFNEL------------KPKL 227

Query: 240 VAQAALFLASEEAGFITAHNLVIDGGY 266
           +A    +L  E         +    G+
Sbjct: 228 IAPVVAYLCHESCE-DNGSYIESAAGW 253

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  134 bits (339), Expect = 5e-38
 Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 26/250 (10%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENG---AHIVIA----DILDELGAALASTIGG 63
           +++RL  K  +ITG + GIG ATA  + E       +++A    + L+EL   +      
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN 86

Query: 64  RYIH---CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSV 120
             +H    D+T+ E ++  +         +DI+ NNAG +     +  +  ED++ +   
Sbjct: 87  AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
           N+  +++  +         +  G I+   S A          Y  SK A+     S   E
Sbjct: 147 NVTALINITQAVLPIFQA-KNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA-SIED 239
           L    IRV  I+P  V +E  +  YR    +A               ++ +  +    +D
Sbjct: 206 LINTKIRVILIAPGLVETEFSLVRYRGNEEQAK--------------NVYKDTTPLMADD 251

Query: 240 VAQAALFLAS 249
           VA   ++  S
Sbjct: 252 VADLIVYATS 261

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  129 bits (326), Expect = 2e-36
 Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 11/181 (6%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIA----DILDELGAALASTIGGR--YIHCDVTK 72
           + ++TG   G G    + F + G  ++      + L      L   +G        DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ----ELKDELGDNLYIAQLDVRN 57

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              +E  +    +    +DI+ NNAG++         ++ED + ++  N  G+++  +  
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              M+E +  G II   S+A        + Y  +K  +   + +   +L    +RV  I 
Sbjct: 118 LPGMVE-RNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 193 P 193
           P
Sbjct: 177 P 177

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  124 bits (313), Expect = 5e-35
 Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 14/206 (6%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
            +ITG   G+G A A+     G  ++++       A LA  +G R +  D+  E + ++ 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARALPADLADELEAKAL 60

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           +  A    G LD++ +  G +G   S+     + V+ +L+ +L           K     
Sbjct: 61  LEEA----GPLDLLVHAVGKAGRA-SVREAGRDLVEEMLAAHLLTAAF----VLKHARF- 110

Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
           Q+    +   +    +      AY+ +K A+     +   EL + G+ +  +    V + 
Sbjct: 111 QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATG 170

Query: 200 MLVNAYRKYLGKADMKPEEVCKMVRD 225
           +   A      K  + PEE  + V +
Sbjct: 171 LW--APLGGPPKGALSPEEAARKVLE 194

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  120 bits (303), Expect = 2e-32
 Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 22/257 (8%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIA----------DILDELGAALASTIGG-R 64
           + K+ +ITG + G G  TA+  A  G H V A            ++ +           R
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAG-HRVYASMRDIVGRNASNVEAIAGFARDNDVDLR 62

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  DV  +  V+ A+   +   G++D++ +NAG     G   +   E    L  +N+  
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH-MVFGPAEAFTPEQFAELYDINVLS 121

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGK 183
                + A   M   Q+ G +I  SSS++  G     A Y  +K A+  +A   A EL +
Sbjct: 122 TQRVNRAALPHMRR-QKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSR 180

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE-------EVCKMVRDSGSLLRGRSAS 236
            GI  + I P    S     A+         + E        + + ++ + + +    A 
Sbjct: 181 WGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD 240

Query: 237 IEDVAQAALFLASEEAG 253
           +  VA A + +    +G
Sbjct: 241 VSLVADAIVRVVGTASG 257

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  117 bits (296), Expect = 2e-31
 Identities = 56/241 (23%), Positives = 92/241 (38%), Gaps = 19/241 (7%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA--HIVIA--------DILDELGAALASTIGG-RYI 66
            V +ITG + GIG   A   A + +    V A          L E   ALA   G    +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV   + V +A       +G++D++  NAG+ G  G + +L  + V  +L VN+ G +
Sbjct: 63  QLDVRDSKSVAAARERVT--EGRVDVLVCNAGL-GLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             ++     M   +  G ++ T S   +MG   +  Y  SK A+ GL  S A  L   G+
Sbjct: 120 RMLQAFLPDMKR-RGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI----EDVAQ 242
            ++ I    V +  +           D              +  +          E+VA+
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 243 A 243
            
Sbjct: 239 V 239

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  113 bits (285), Expect = 4e-30
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 10/183 (5%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIA-----DILDELGAALASTIGGRYIHCDV 70
           + KV ++TG + G G A A+     G   VI      + LD+L AA         I  DV
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAG-DTVIGTARRTEALDDLVAAYPD--RAEAISLDV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T  E ++      ++  G++D++ NNAG     G+       +++ L  +++ G     +
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGR-TQVGAFEETTERELRDLFELHVFGPARLTR 119

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                M E +  GS++  SS    +      AYS +K A+  L+   A E+   GI+V  
Sbjct: 120 ALLPQMRE-RGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 191 ISP 193
           + P
Sbjct: 179 VEP 181

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 98.9 bits (247), Expect = 6e-25
 Identities = 43/201 (21%), Positives = 73/201 (36%), Gaps = 23/201 (11%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILD-ELGAALASTIGGR--YIHCDVT 71
           +    V+TG  RGIG    +   ++     +IA   D E    L S    R   +   VT
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 72  KEEDVESAV-RLAVSWKGQ-LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
            ++ +++ V ++        L ++ NNAG+  S G+ T  N   +   L VN   ++   
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 130 KH----------AAKAMIEGQRKGSIICTSSSAAIMG-------GLASHAYSLSKEAIIG 172
           +                     + ++I  SS    +             AY +SK AI  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 173 LARSTACELGKHGIRVNCISP 193
             R+ A +L    + V    P
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCP 202

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 98.6 bits (246), Expect = 1e-24
 Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 22/198 (11%)

Query: 18  KVAVITGGARGIGAATAKLFAENGA--HIVIA-----DILDELGAALASTIGGRYIHCDV 70
              +ITG  RG+G    K           +       +   EL     +      +  D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 71  TKEEDVESAVRLAVSWKGQ--LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
              +  +  V           L+++FNNAGI+     IT++  +++   L  N    +  
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 129 IKH----------AAKAMIEGQRKGSIICTSS---SAAIMGGLASHAYSLSKEAIIGLAR 175
            K           A ++   G  + +II  SS   S         +AY  SK A+    +
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201

Query: 176 STACELGKHGIRVNCISP 193
           S + +L    I    + P
Sbjct: 202 SLSVDLYPQRIMCVSLHP 219

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 98.1 bits (244), Expect = 3e-24
 Identities = 52/325 (16%), Positives = 91/325 (28%), Gaps = 110/325 (33%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG------R 64
            +     + AV+TGG +GIG    K  + NG  +V+       G      +         
Sbjct: 6   PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVV 65

Query: 65  YIHCDVTKEED-VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSL-------------- 109
           +   DVT     + S      +  G+LDI+ NNAG++G                      
Sbjct: 66  FHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEL 125

Query: 110 ---------------NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI 154
                            E  +  L +N NG+    +     +        I+  SSS   
Sbjct: 126 VKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGS 184

Query: 155 MGGLASH-------------------------------------------AYSLSKEAII 171
           +  +++                                            AY+ SK  + 
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR 231
              R  A ++     +VNC+ P  V +E                      M    G+   
Sbjct: 245 AYTRVLANKIP--KFQVNCVCPGLVKTE----------------------MNYGIGNY-- 278

Query: 232 GRSASIEDVAQAALFLASEEAGFIT 256
               + E+ A+  + +A       +
Sbjct: 279 ----TAEEGAEHVVRIALFPDDGPS 299

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 82.8 bits (205), Expect = 9e-19
 Identities = 43/238 (18%), Positives = 76/238 (31%), Gaps = 59/238 (24%)

Query: 16  TGKVAVITGGARGIGAATAKLFAE-NGAHIVIA--DILDELGAALASTIGG-----RYIH 67
              VA++TGG +GIG A  +         +V+   D+    G A    +       R+  
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--TRGQAAVQQLQAEGLSPRFHQ 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D+   + + +         G LD++ NNAGI+      T  +    +  +  N  G   
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFH-IQAEVTMKTNFFGTRD 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMG------------------------------- 156
                   +    R   ++  SS  ++                                 
Sbjct: 120 VCTELLPLIKPQGR---VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 157 ----------GLASHAYSLSKEAIIGLARSTACELGKH----GIRVNCISPHGVPSEM 200
                     G  S AY ++K  +  L+R  A +L +      I +N   P  V ++M
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 50/275 (18%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYI-HC 68
           L+GK  ++TG A    I    A+     GA +      D L       A+ +G   +  C
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 66

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNLN 123
           DV ++  +++    L   W  + D   ++ G +      G  + ++  E  K    ++  
Sbjct: 67  DVAEDASIDTMFAELGKVW-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 125

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLAR 175
             +   K     +  G    +++  S   A        +MG        L+K ++    R
Sbjct: 126 SFVAMAKACRSMLNPG---SALLTLSYLGAERAIPNYNVMG--------LAKASLEANVR 174

Query: 176 STACELGKHGIRVNCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMVRDSGSLLR 231
             A  +G  G+RVN IS  G P   L    +  +RK L   +              + +R
Sbjct: 175 YMANAMGPEGVRVNAISA-G-PIRTLAASGIKDFRKMLAHCEAV------------TPIR 220

Query: 232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            R+ +IEDV  +A FL S+ +  I+   + +DGG+
Sbjct: 221 -RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 57/278 (20%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYI-HC 68
           L+GK A++ G    R +G A A    E GA + ++   + L      LA  +GG  +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNG 124
           DVT++E++++    +  ++ G LD + +    +      G       +D    L V+   
Sbjct: 66  DVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLARS 176
           ++   + A   + EG   G I+  +  A+        +M         ++K A+    R 
Sbjct: 125 LVAVARRAEPLLREG---GGIVTLTYYASEKVVPKYNVMA--------IAKAALEASVRY 173

Query: 177 TACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS 228
            A ELG  G+RVN IS           +P       + K   +                +
Sbjct: 174 LAYELGPKGVRVNAISAGPVRTVAARSIPG------FTKMYDRVAQT------------A 215

Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            LR R+ + E+V    LFL S  A  IT   + +D GY
Sbjct: 216 PLR-RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 56/280 (20%), Positives = 103/280 (36%), Gaps = 59/280 (21%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGR---YI 66
           L  K  VI G A  R I    AK+  + GA +V     +   +    L   +        
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89

Query: 67  HCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNL 122
             DV  +E+V +   ++     G +D ++++   +      G  +  + E       ++ 
Sbjct: 90  QIDVQSDEEVINGFEQIGKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 148

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLA 174
             +      A K M EG   GSI+ T+            +MG        ++K ++    
Sbjct: 149 YSLTIVAHEAKKLMPEG---GSIVATTYLGGEFAVQNYNVMG--------VAKASLEANV 197

Query: 175 RSTACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS 226
           +  A +LG   IRVN IS          GV        +   L + + +           
Sbjct: 198 KYLALDLGPDNIRVNAISAGPIRTLSAKGVGG------FNTILKEIEER----------- 240

Query: 227 GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            + L+ R+    +V + A +L S+ +  +T  N+ +D G+
Sbjct: 241 -APLK-RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 56/281 (19%), Positives = 101/281 (35%), Gaps = 63/281 (22%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVI-------ADILDELGAALASTIGGRY 65
           L GK  +I G A  + I    A+     GA +            +  +   L S      
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPY---V 60

Query: 66  IHCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVN 121
              DV+KEE  +S    +     G LD + ++   +      GS+   +       + ++
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEIS 119

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGL 173
           +  ++         +  G    S++  S   +        +MG        L+K A+   
Sbjct: 120 VYSLIELTNTLKPLLNNG---ASVLTLSYLGSTKYMAHYNVMG--------LAKAALESA 168

Query: 174 ARSTACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
            R  A +LGKH IRVN +S          G+        +R  L   ++           
Sbjct: 169 VRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD------FRMILKWNEIN---------- 212

Query: 226 SGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             + LR ++ S+E+V  A ++L S  +  ++     +D GY
Sbjct: 213 --APLR-KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 66/278 (23%), Positives = 105/278 (37%), Gaps = 56/278 (20%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVI-------ADILDELGAALASTIGGRY 65
           L GK  ++TG    R I    AK     GA +          D + E  A   S +    
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSEL---V 68

Query: 66  IHCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSV 120
             CDV  +  +++    L   W   LD + ++ G +     +G  +  L  E+ +    +
Sbjct: 69  FPCDVADDAQIDALFASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDI 127

Query: 121 NLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIG 172
           +        K A   + +     S++  S   A         MG        L+K A+  
Sbjct: 128 SAYSFPALAKAALPMLSDD---ASLLTLSYLGAERAIPNYNTMG--------LAKAALEA 176

Query: 173 LARSTACELGKHGIRVNCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMVRDSGS 228
             R  A  LG  G+RVN IS  G P + L    + ++ K L   +              S
Sbjct: 177 SVRYLAVSLGAKGVRVNAISA-G-PIKTLAASGIKSFGKILDFVESN------------S 222

Query: 229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
            L+ R+ +IE V  A  FL S+ A  +TA  + +D G+
Sbjct: 223 PLK-RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 63/276 (22%), Positives = 111/276 (40%), Gaps = 51/276 (18%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGR---YI 66
           L G+  V+ G A  R I    A+   E GA ++     + L++    LA T+       +
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64

Query: 67  HCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNL 122
            CDVT + ++E+    +     G +  + +    +      G   + N +      +++ 
Sbjct: 65  PCDVTNDAEIETCFASIKEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISS 123

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLA 174
             +   +K A   M EG   GSI+  +            +MG        ++K ++    
Sbjct: 124 YSLTAVVKAARPMMTEG---GSIVTLTYLGGELVMPNYNVMG--------VAKASLDASV 172

Query: 175 RSTACELGKHGIRVNCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMVRDSGSLL 230
           +  A +LGK  IRVN IS  G P   L    ++ +   L   + +            + L
Sbjct: 173 KYLAADLGKENIRVNSISA-G-PIRTLSAKGISDFNSILKDIEER------------APL 218

Query: 231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           R R+ + E+V   A FL S+ +  IT  NL +D G+
Sbjct: 219 R-RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 49/274 (17%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYI-HC 68
           L GK  +I G A  R I    AK   E GA +      D L +    LA  +G     HC
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHC 88

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNG 124
           DV     +++    L   W G+LD + +  G S      G     +  +    + +++  
Sbjct: 89  DVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYS 147

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLARS 176
           +    + A K M +G   GSI+  +   A        +MG        ++K A+    + 
Sbjct: 148 LTAVSRRAEKLMADG---GSILTLTYYGAEKVMPNYNVMG--------VAKAALEASVKY 196

Query: 177 TACELGKHGIRVNCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMVRDSGSLLRG 232
            A +LG   IRVN IS  G P + L    +  +R  L   +              + LR 
Sbjct: 197 LAVDLGPQNIRVNAISA-G-PIKTLAASGIGDFRYILKWNEYN------------APLR- 241

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           R+ +I++V    L+  S+ +  +T      D GY
Sbjct: 242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 67/274 (24%), Positives = 106/274 (38%), Gaps = 49/274 (17%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYI-HC 68
           + GK  VI G A  + +    AK     GA + +    +   +    LA ++G +    C
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPC 87

Query: 69  DVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNG 124
           DV+  E V++    LA  W G LD + +    S      G     ++ +    + ++   
Sbjct: 88  DVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYS 146

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGLARS 176
             +    A   M  G   GSI+  S   A        +MG        + K A+    + 
Sbjct: 147 FTYIASKAEPLMTNG---GSILTLSYYGAEKVVPHYNVMG--------VCKAALEASVKY 195

Query: 177 TACELGKHGIRVNCISPHGVPSEML----VNAYRKYLGKADMKPEEVCKMVRDSGSLLRG 232
            A +LGK  IRVN IS  G P   L    ++ +   L                  S LR 
Sbjct: 196 LAVDLGKQQIRVNAISA-G-PVRTLASSGISDFHYILTWNKYN------------SPLR- 240

Query: 233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           R+ +++DV  AAL+L S+     T   + +D GY
Sbjct: 241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 59/281 (20%), Positives = 99/281 (35%), Gaps = 62/281 (22%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVI------ADILDELGAALASTIGGRYI 66
           L GK  +ITG    + I    AK     GA +         D +++L A          +
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAA---VL 80

Query: 67  HCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVN 121
            CDV  +++++     L   W   LD + ++   +      G  I  +  E       ++
Sbjct: 81  PCDVISDQEIKDLFVELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS 139

Query: 122 LNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAYSLSKEAIIGL 173
                   K     M    R  S++  +   A         MG        ++K ++   
Sbjct: 140 AYSFAALAKEGRSMMKN--RNASMVALTYIGAEKAMPSYNTMG--------VAKASLEAT 189

Query: 174 ARSTACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
            R TA  LG+ GI+VN +S          G+ +      ++K L    M           
Sbjct: 190 VRYTALALGEDGIKVNAVSAGPIKTLAASGISN------FKKMLDYNAMV---------- 233

Query: 226 SGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             S L+ ++  I +V     FL S+ A  IT   + +D GY
Sbjct: 234 --SPLK-KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 62/291 (21%)

Query: 5   DDTNKLSSKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVI-------ADILDELGA 55
            +  ++    L GK A+ITG A  R I    AK F   GA +            + E+  
Sbjct: 9   SNKGEVFMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAK 68

Query: 56  ALASTIGGRYIHCDVTKEEDVESAV-RLAVSWKGQLDIMFNNAGISGS---GGSITSLNM 111
              S +    + CDV+ +ED+++    L  +W G LDI+ ++   +      G +   + 
Sbjct: 69  GFGSDL---VVKCDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSR 124

Query: 112 EDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--------IMGGLASHAY 163
           E  K  + +++  ++   +     M    R G+I+  S   A        +MG       
Sbjct: 125 EGFKIAMDISVYSLIALTRELLPLMEG--RNGAIVTLSYYGAEKVVPHYNVMG------- 175

Query: 164 SLSKEAIIGLARSTACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMK 215
            ++K A+    R  A ++ KHG R+N IS         + +        +   +      
Sbjct: 176 -IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG------FHLLMEHTTKV 228

Query: 216 PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
                       +    +  +IEDV   A+FL S+ A  IT   + +D GY
Sbjct: 229 ------------NPFG-KPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 50/279 (17%), Positives = 91/279 (32%), Gaps = 46/279 (16%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDE-LGAALASTIGGRY--IHCD 69
           L GK  +++G      I    A++  E GA +V+       L   +   +  +   +  D
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 64

Query: 70  VTKEEDVESAV-RLAVSW--KGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNL 122
           V  EE + S   R+  +     +LD + ++ G                  DV   + ++ 
Sbjct: 65  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 124

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTS--SSAAI-----MGGLASHAYSLSKEAIIGLAR 175
                  K     M  G   GSI+      S A+     M         ++K A+  + R
Sbjct: 125 YSYASMAKALLPIMNPG---GSIVGMDFDPSRAMPAYNWMT--------VAKSALESVNR 173

Query: 176 STACELGKHGIRVNCISP--------HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG 227
             A E GK+G+R N ++           +    L       +   +   ++         
Sbjct: 174 FVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR-------- 225

Query: 228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
           + +         VA+    L S+     T   +  DGG 
Sbjct: 226 APIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 67/301 (22%), Positives = 103/301 (34%), Gaps = 64/301 (21%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
           L G+ A + G A   G G A AK  A  GA + +      LG    S   GR        
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 73  EEDVESAVR---LAVSWKGQL----DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  +        L  ++        DI  N       G +I  +    VK  L  N++ +
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEV-AVKVKQDLG-NIDIL 124

Query: 126 LHGIKHA---AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE--AII--------- 171
           +H + +     K ++E  RKG +  +S+SA     L  H   +  E  + +         
Sbjct: 125 VHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAER 184

Query: 172 ---------GLA--------RSTACELG-KHGIRVNCISP--------HGVPSEMLVNAY 205
                      A        R+ A E G K+G+RVN IS           +      +  
Sbjct: 185 VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFI 244

Query: 206 RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 265
              +  +               + LR R    +DV  AALFL S  A  ++   L +D G
Sbjct: 245 DYAIDYSYNN------------APLR-RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

Query: 266 Y 266
            
Sbjct: 292 L 292

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 69.1 bits (169), Expect = 7e-14
 Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 21/174 (12%)

Query: 9   KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--- 65
           K +   + GK AV+  G   +G  +A L A  GA +V+     +   A A ++  R+   
Sbjct: 111 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN 170

Query: 66  -IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
               +   +     AV            +F           +  L     +   S+ +  
Sbjct: 171 VTAAETADDASRAEAV-------KGAHFVFTAG-----AIGLELLPQAAWQNESSIEIVA 218

Query: 125 ILHGIKHAAKAMIEGQRKGSII--CTSSSAAIMGGLASHAYSLSKEAIIGLARS 176
             +         I+   KG       +  A  +GGL      L +  I  L  S
Sbjct: 219 DYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGL---KLKLHRACIAKLFES 269

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
              +  VITG   G+GA TA+  A  GA +++A      G A A T+ G+      D+ 
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ 72

Query: 72 KEEDVESAVRLAVSWKGQLDIMFNNAGI 99
             D+ S VR         D++ NNAGI
Sbjct: 73 ---DLSS-VRRFADGVSGADVLINNAGI 96

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 64/297 (21%), Positives = 104/297 (35%), Gaps = 62/297 (20%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
           L GK A I G A   G G A AK  A  GA I++   +  L     S   G++    V  
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 73  EEDVESAVR---LAVSWKGQL----DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           +  +    +   L   +        D+  N      S  ++     E V+     +++ +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEA-AECVRQDFG-SIDIL 123

Query: 126 LHGIKHA---AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE--AII--------- 171
           +H + +    +K ++E  RKG +   S+S+     L SH   +     A I         
Sbjct: 124 VHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASER 183

Query: 172 ---------GLA--------RSTACELG-KHGIRVNCISPHGVPSEML----VNAYRKYL 209
                      A        R  A E G K  IRVN IS  G P        +      +
Sbjct: 184 IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA-G-PLGSRAAKAIGFIDTMI 241

Query: 210 GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 266
             +               + ++ ++ + ++V  AA FL S  A  IT   + +D G 
Sbjct: 242 EYSYNN------------APIQ-KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 59/314 (18%), Positives = 99/314 (31%), Gaps = 77/314 (24%)

Query: 15  LTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK 72
           L GK A + G A   G G A  KL    GA +++                 R+       
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 73  EEDVESAVRLAVSWKG--------------------QLDIMFNNAGISGSGGSITSLNME 112
           +E        A                           ++  N       G +I+ +  E
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEV-AE 125

Query: 113 DVKFLLSVNLNGILHGIKHA---AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE- 168
            V+  +   ++ ++H + +     K +++  RKG +   SSS+     L  H   L KE 
Sbjct: 126 AVRADVG-QIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG 184

Query: 169 -AII------------------GLA--------RSTACELGK-HGIRVNCISP------- 193
            + +                    A        R+ A E G+   +RVNCIS        
Sbjct: 185 GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244

Query: 194 -HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
              +            +  ++              + L+ +    +DV +AALFL S  A
Sbjct: 245 ASAIGKAGDKTFIDLAIDYSEAN------------APLQ-KELESDDVGRAALFLLSPLA 291

Query: 253 GFITAHNLVIDGGY 266
             +T   L +D G 
Sbjct: 292 RAVTGATLYVDNGL 305

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 58.4 bits (141), Expect = 4e-10
 Identities = 48/323 (14%), Positives = 93/323 (28%), Gaps = 75/323 (23%)

Query: 17  GKVAVITGGA--RGIGAATAKLFAENGAHIVIA---DILDELGAALASTIGGRYIHCDVT 71
             +  I G     G G   AK  ++    I+      + +       +      +  D  
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 72  KEEDVESAVRLAVSWKGQL----DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           K+ ++   +    S+        +   N         +I  +    +       +N ++H
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDV-ANLIHQKYG-KINMLVH 119

Query: 128 GIKHA---AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE--AII----------- 171
            + +A    K ++   RKG +   S S+  +  L  +  ++ K   +II           
Sbjct: 120 SLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 172 -------GLA--------RSTACELG-KHGIRVNCISP---------------------- 193
                    A        R  A  LG  + IR+N IS                       
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT 239

Query: 194 --HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR--------GRSASIEDVAQA 243
             +   +   V+      G+ + K     +        +          +     D+   
Sbjct: 240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSV 299

Query: 244 ALFLASEEAGFITAHNLVIDGGY 266
           A FL S E+  IT   + +D G 
Sbjct: 300 ASFLLSRESRAITGQTIYVDNGL 322

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 22/141 (15%)

Query: 21  VITGGARG-IGAATAKLFAENGA-------HIVIADILDELGAALASTIGGRYIHCDVTK 72
            I G A G +G    +   ++G+          + D+  +  A    +        D++ 
Sbjct: 18  AIIGAA-GMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF-QPEAPAGFSGAVDARAADLSA 75

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
             + E  V      + + D++F+ A I  SG +       D      +NL+G  +     
Sbjct: 76  PGEAEKLV------EARPDVIFHLAAIV-SGEA-----ELDFDKGYRINLDGTRYLFDAI 123

Query: 133 AKAMIEGQRKGSIICTSSSAA 153
             A  +   K  ++ TSS A 
Sbjct: 124 RIANGKDGYKPRVVFTSSIAV 144

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 37/184 (20%), Positives = 59/184 (32%), Gaps = 42/184 (22%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV 80
           ++TG A  +G    +  A     + +AD L  L  A         + CD+     V + V
Sbjct: 7   LVTGAAGQLGRVMRERLAPMAEILRLAD-LSPLDPAGP---NEECVQCDLADANAVNAMV 62

Query: 81  RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ 140
                     D + +  GIS              + +L  N+ G+ +  + A      GQ
Sbjct: 63  A-------GCDGIVHLGGISVEK---------PFEQILQGNIIGLYNLYEAARAH---GQ 103

Query: 141 RKGSIICTSSSAAIMGGLASHA-------------YSLSKEAIIGLARSTACELGKHGIR 187
            +  I+  SS+  I G                   Y +SK     LAR       K G  
Sbjct: 104 PR--IVFASSNHTI-GYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYF---DKFGQE 157

Query: 188 VNCI 191
              +
Sbjct: 158 TALV 161

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 42.9 bits (101), Expect = 8e-05
 Identities = 52/247 (21%), Positives = 80/247 (32%), Gaps = 71/247 (28%)

Query: 14  RLTGKVAVITGGARG-IGAATAKLFAENGAHIVIA-------------DILDELGAALAS 59
               K  +ITG  +G IGA   +   + GA +V+               I  + GA  ++
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGST 532

Query: 60  TIGGRYIHCDVTKEEDVESAV------RLAVSWKGQLDIMFNNAGISGSGGSITSLNMED 113
            I    +  +   ++DVE+ +               LD +   A I   G  +  +   D
Sbjct: 533 LI---VVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHI---D 586

Query: 114 VKF-----LLSVNLNGILHGIKHAAKAMIEGQRKGSIIC-TSSSAAIMGGLASHAYSLSK 167
            K      ++  N+  ++  +K    A     R   +I   S +    GG     YS SK
Sbjct: 587 SKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGG--DGMYSESK 644

Query: 168 ------------E----------AIIGLARST---------ACELGKHGIRVNCISPHGV 196
                       E          AIIG  R T         A  + K G+R    S    
Sbjct: 645 LSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT--FSQK-- 700

Query: 197 PSEMLVN 203
             EM  N
Sbjct: 701 --EMAFN 705

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 44/185 (23%)

Query: 21  VITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV 80
           ++TG A G+G+A           + ++DI+D LGAA A       + CD+   + V   V
Sbjct: 6   LVTGAAGGVGSAIRPHLGTLAHEVRLSDIVD-LGAAEA---HEEIVACDLADAQAVHDLV 61

Query: 81  RLAVSWKGQLDIMFNNAGISGSGGSITSLNMED-VKFLLSVNLNGILHGIKHAAKAMIEG 139
           +         D + +  G+S          +E     +L  N+ G  +  + A      G
Sbjct: 62  K-------DCDGIIHLGGVS----------VERPWNDILQANIIGAYNLYEAARNL---G 101

Query: 140 QRKGSIICTSSSAAIMGGLASHA-------------YSLSKEAIIGLARSTACELGKHGI 186
           + +  I+  SS+  I G                   Y LSK     LA        K  I
Sbjct: 102 KPR--IVFASSNHTI-GYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYY---HKFDI 155

Query: 187 RVNCI 191
               I
Sbjct: 156 ETLNI 160

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 29/98 (29%)

Query: 10  LSSKRLTGKVAV-------------ITGGARGIGAATAK-LFAENGA-HIVI-------- 46
           LS  R  GK+ +             +TGG   +GA  A+ L  E G  ++V+        
Sbjct: 510 LSQARHVGKLVLTMPPVWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA 569

Query: 47  ---ADILDELGAALASTIGGRYIHCDVTKEEDVESAVR 81
              A+++ +L A  A         CDV   E +   + 
Sbjct: 570 SGAAELVAQLTAYGAEV---SLQACDVADRETLAKVLA 604

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 4  RDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIG 62
             +  +  + +   V ++  G+  +        A N   ++ +A        ALA   G
Sbjct: 11 HHSSGHIEGRHMGKNVLLL--GSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG 68

Query: 63 GRYIHCDVTKEEDVESAVR 81
           + I  DVT +  ++  + 
Sbjct: 69 SKAISLDVTDDSALDKVLA 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	278
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.85
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.82
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.82
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.82
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.81
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.8
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.77
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.74
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.71
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.66
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.64
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.62
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.43
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.28
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.16
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.72
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.7
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.7
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.7
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.69
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.69
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.63
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.63
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.53
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.47
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.47
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.46
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.45
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.44
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.43
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.43
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.42
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.41
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.4
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.4
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.39
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.35
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.28
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.27
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.22
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.19
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.18
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.17
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.16
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.08
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.08
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.07
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.06
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.05
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.05
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.01
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.97
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.93
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.92
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.9
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.89
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.89
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.89
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.88
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.87
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.87
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.86
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.85
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.85
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.84
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.8
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.77
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.75
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.74
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.71
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.62
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.61
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.58
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.57
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.52
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.51
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.47
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.4
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.4
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.37
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.37
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.35
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.35
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.33
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.33
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.33
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.32
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.3
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.29
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.28
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.27
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.27
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.23
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.21
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.19
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.17
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.14
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.12
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.11
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.1
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.08
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.06
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.06
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.05
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.04
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.01
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.99
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.99
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.99
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.98
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.98
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.97
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.96
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.96
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.94
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.93
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.91
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.88
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.85
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.85
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.85
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.82
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.79
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.76
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.73
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.72
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.72
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.69
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.68
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.6
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.58
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.56
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.56
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.55
1lnq_A	336	MTHK channels, potassium channel related protein;	96.52
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.52
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.38
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.36
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.32
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.32
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.29
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.22
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.22
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.19
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.18
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	96.17
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.14
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.13
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.12
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.11
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.1
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.07
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.04
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.0
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.95
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.94
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.9
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.9
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.77
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.76
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.69
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.68
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.64
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.62
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.61
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.6
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.57
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.57
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.53
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.5
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.47
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.43
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.41
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.35
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.33
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.27
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.25
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.23
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.17
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.13
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.12
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.08
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	95.07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.07
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.05

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=6.4e-61  Score=403.36  Aligned_cols=248  Identities=32%  Similarity=0.465  Sum_probs=221.7

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      |.++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++.+|++|+++++++++++.+
T Consensus         1 Sy~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            1 SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998888776654     267789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      +||+||+||||||+.....++.+++.++|++.+++|+.++|+++|+++|+|++++ .|+||++||..+..+.++..+|++
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~a  159 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTV  159 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHH
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHH
Confidence            9999999999999876667899999999999999999999999999999999876 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++.....       ..............  .|++|+++|||||++++
T Consensus       160 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-------~~~~~~~~~~~~~~--~~~~R~g~pediA~~v~  230 (254)
T 4fn4_A          160 AKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS-------KPSELGMRTLTKLM--SLSSRLAEPEDIANVIV  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCS-------SCCHHHHHHHHHHH--TTCCCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccccc-------CCcHHHHHHHHhcC--CCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999864321       11222222222222  26799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+|+.++|+||++|.+|||+++
T Consensus       231 fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          231 FLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCCcCCEEEeCCCccc
Confidence            99999999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.8e-59  Score=394.74  Aligned_cols=244  Identities=29%  Similarity=0.378  Sum_probs=220.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++     ++.++.+|++|+++++++++++.++|
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4899999999999999999999999999999999999988877766544     36678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |+||+||||||+. ...++.+++.++|++.+++|+.++|+++|+++|+|.++++.|+||++||..+..+.++..+|++||
T Consensus        85 G~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  163 (255)
T 4g81_D           85 IHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAK  163 (255)
T ss_dssp             CCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            9999999999986 557899999999999999999999999999999998765579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.....         ..++..+....  ..|++|+++|||+|++++||
T Consensus       164 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---------~~~~~~~~~~~--~~Pl~R~g~pediA~~v~fL  232 (255)
T 4g81_D          164 GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI---------EDKQFDSWVKS--STPSQRWGRPEELIGTAIFL  232 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH---------TCHHHHHHHHH--HSTTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc---------CCHHHHHHHHh--CCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999987765         22333333222  23789999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+.++|+||++|.+|||++-
T Consensus       233 ~S~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          233 SSKASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhCCCcCCEEEECCCeEe
Confidence            999999999999999999863

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.7e-58  Score=392.32  Aligned_cols=250  Identities=30%  Similarity=0.433  Sum_probs=214.2

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHH
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..+| ...|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++  +.++++|++|+++++++++++.
T Consensus        20 ~~~M-s~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           20 FQSM-TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             ------CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhh-cchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3344 346999999999999999999999999999999999999999888877765  6778999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++||+||+||||||+. ...++.+++.++|++.+++|+.++|+++|+++|.|++   .|+||+++|..+..+.++..+|+
T Consensus        99 ~~~G~iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~~~~Y~  174 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPAFSVYA  174 (273)
T ss_dssp             HHHSCEEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCCchHHH
Confidence            9999999999999986 5678999999999999999999999999999999965   57999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edva~~  243 (278)
                      +||+|+.+|+|+++.||+++|||||+|+||+++|++..+....       .+.+..... ......|++|+++|||||++
T Consensus       175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~-------~~~~~~~~~~~~~~~~PlgR~g~peeiA~~  247 (273)
T 4fgs_A          175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGK-------DPVQQQGLLNALAAQVPMGRVGRAEEVAAA  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC----------------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhcc-------CchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999999998765421       222211111 11223488999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+|+.++|+||++|.+|||++.
T Consensus       248 v~FLaSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          248 ALFLASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHhCchhcCccCCeEeECcChhh
Confidence            9999999999999999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8e-57  Score=375.41  Aligned_cols=239  Identities=26%  Similarity=0.369  Sum_probs=209.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.+  ..+++.+.. ++.++.+|++|+++++++++     +|+
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~   79 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAG   79 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTC
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCC
Confidence            5899999999999999999999999999999999999742  233333322 26788999999998887764     589


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+++.++|++.+++|+.++|+++|+++|+|.++++.|+||++||..+..+.++..+|++||++
T Consensus        80 iDiLVNNAGi~-~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaa  158 (247)
T 4hp8_A           80 FDILVNNAGII-RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHG  158 (247)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHH
Confidence            99999999987 45789999999999999999999999999999999886657999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +.+|+|+++.||+++|||||+|+||+++|++......        +++.......   .+|++|+++|||||++++||+|
T Consensus       159 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~--------~~~~~~~~~~---~~PlgR~g~peeiA~~v~fLaS  227 (247)
T 4hp8_A          159 VAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA--------DAARNKAILE---RIPAGRWGHSEDIAGAAVFLSS  227 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--------SHHHHHHHHT---TCTTSSCBCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc--------CHHHHHHHHh---CCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999876541        2222233322   3588999999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.++|+||++|.+|||++.
T Consensus       228 d~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          228 AAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCeEEECccccc
Confidence            9999999999999999873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.8e-56  Score=377.91  Aligned_cols=250  Identities=28%  Similarity=0.356  Sum_probs=210.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHH---Hhh-hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL---AST-IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~---~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++..+.+   .+. .++.++.+|++|+++++++++++.++|
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999976543322   222 247889999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |+||+||||||+..  ....+.+.++|++.+++|+.++|+++|+++|+|+++  .|+||++||..+..+.++...|++||
T Consensus        82 G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           82 GRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             SCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCCchHHHHHH
Confidence            99999999999863  234588999999999999999999999999999764  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edva~~~~~  246 (278)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.........    .+.+...+..   ...|+ +|+++|||||++++|
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~----~~~~~~~~~~---~~~plg~R~g~peeiA~~v~f  230 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFE----DPEAKLAEIA---AKVPLGRRFTTPDEIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------CHHHHHH---TTCTTTTSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhccc----ChHHHHHHHH---hcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999876542211    1112222222   23466 599999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccCcCc
Q 023708          247 LASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      |+|+.++|+||++|.+|||+|....+
T Consensus       231 LaS~~a~~iTG~~i~VDGG~T~l~~s  256 (258)
T 4gkb_A          231 LLSPRASHTTGEWLFVDGGYTHLDRA  256 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTTSCTT
T ss_pred             HhCchhcCccCCeEEECCCcchhhhh
Confidence            99999999999999999999966554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.1e-56  Score=375.69  Aligned_cols=250  Identities=28%  Similarity=0.362  Sum_probs=219.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.  .+   .+..++++|++++++++++++++.++||++|
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   80 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GL---PEELFVEADLTTKEGCAIVAEATRQRLGGVD   80 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--TS---CTTTEEECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--CC---CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            458999999999999999999999999999999999997542  11   1245789999999999999999999999999


Q ss_pred             EEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-CCchhhhhHHH
Q 023708           92 IMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEA  169 (278)
Q Consensus        92 ~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~a  169 (278)
                      +||||||+... ..++.+++.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.+ +...|++||+|
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~~Y~asKaa  159 (261)
T 4h15_A           81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTTAYAAAKAA  159 (261)
T ss_dssp             EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCHHHHHHHHH
T ss_pred             EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccHHHHHHHHH
Confidence            99999997543 45789999999999999999999999999999999876 79999999999999876 57889999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHh-hcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR-DSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +.+|+|+++.|++++|||||+|+||+++|++..............+.+...+... ....+|++|+++|||||++++||+
T Consensus       160 l~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLa  239 (261)
T 4h15_A          160 LSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLA  239 (261)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999887765544444445554444333 344568999999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      |+.++|+||++|.+|||+.
T Consensus       240 S~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          240 SDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             SGGGTTCCSCEEEESTTCS
T ss_pred             CchhcCccCcEEEECCcCc
Confidence            9999999999999999973

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8.5e-56  Score=368.48  Aligned_cols=232  Identities=31%  Similarity=0.409  Sum_probs=201.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++.. ..++..+.+|++|+++++++++    ++|++|+||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFE----ALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHH----HCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHH----hcCCCCEEE
Confidence            58999999999999999999999999999999999876544322 2246788999999999888765    579999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||+.   .++.+++.++|++.+++|+.++|+++|+++|+|+++  .|+||++||..+..+.++..+|++||+++.+|+
T Consensus        84 NNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaav~~lt  158 (242)
T 4b79_A           84 NNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSADRPAYSASKGAIVQLT  158 (242)
T ss_dssp             ECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred             ECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHH
Confidence            999975   467899999999999999999999999999999764  599999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      |+++.||+++|||||+|+||+++|++.....        .+++........   .|++|+++|||||++++||+|+.++|
T Consensus       159 r~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~--------~~~~~~~~~~~~---~PlgR~g~peeiA~~v~fLaSd~a~~  227 (242)
T 4b79_A          159 RSLACEYAAERIRVNAIAPGWIDTPLGAGLK--------ADVEATRRIMQR---TPLARWGEAPEVASAAAFLCGPGASF  227 (242)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCC-----C--------CCHHHHHHHHHT---CTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHhhhcCeEEEEEEeCCCCChhhhccc--------CCHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999876532        133333444333   48899999999999999999999999


Q ss_pred             ceeeEEeecCCcc
Q 023708          255 ITAHNLVIDGGYT  267 (278)
Q Consensus       255 ~tG~~i~~dgG~~  267 (278)
                      +||++|.+|||+.
T Consensus       228 iTG~~l~VDGG~l  240 (242)
T 4b79_A          228 VTGAVLAVDGGYL  240 (242)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             ccCceEEECccHh
Confidence            9999999999985

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=7e-55  Score=365.16  Aligned_cols=229  Identities=28%  Similarity=0.435  Sum_probs=206.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +|++|||||++|||+++|++|+++|++|++++|+++..+++.++.. +.++++|++|+++++++++++.++||+||+|||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5999999999999999999999999999999999988887776543 677899999999999999999999999999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||+. ...++.+++.++|++.+++|+.++|+++|+++|+|.++  .|+||++||..+..+.++..+|++||+++.+|+|
T Consensus        82 NAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk  158 (247)
T 3ged_A           82 NACRG-SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAKGGIVALTH  158 (247)
T ss_dssp             CCCCC-CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHH
Confidence            99986 55789999999999999999999999999999999874  4899999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCc
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  255 (278)
                      +++.||++ |||||+|+||+++|++..+..           +   +...   .+|++|+++|||||++++||+|+  +|+
T Consensus       159 ~lA~ela~-~IrVN~I~PG~i~t~~~~~~~-----------~---~~~~---~~Pl~R~g~pediA~~v~fL~s~--~~i  218 (247)
T 3ged_A          159 ALAMSLGP-DVLVNCIAPGWINVTEQQEFT-----------Q---EDCA---AIPAGKVGTPKDISNMVLFLCQQ--DFI  218 (247)
T ss_dssp             HHHHHHTT-TSEEEEEEECSBCCCC---CC-----------H---HHHH---TSTTSSCBCHHHHHHHHHHHHHC--SSC
T ss_pred             HHHHHHCC-CCEEEEEecCcCCCCCcHHHH-----------H---HHHh---cCCCCCCcCHHHHHHHHHHHHhC--CCC
Confidence            99999997 999999999999999865322           1   1111   24889999999999999999974  699


Q ss_pred             eeeEEeecCCccc
Q 023708          256 TAHNLVIDGGYTT  268 (278)
Q Consensus       256 tG~~i~~dgG~~~  268 (278)
                      ||++|.+|||++.
T Consensus       219 TG~~i~VDGG~s~  231 (247)
T 3ged_A          219 TGETIIVDGGMSK  231 (247)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCeEEECcCHHH
Confidence            9999999999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.4e-53  Score=361.54  Aligned_cols=242  Identities=20%  Similarity=0.241  Sum_probs=211.4

Q ss_pred             CCCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++|+||++|||||++  |||+++|++|+++|++|++++|+++..+++.+.+      ++.++++|++|+++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999875  9999999999999999999999877666554432      36788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           85 SWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      +++|++|+||||||+...   ..++.+.+.++|+..+++|+.+++.+++.+.+.+.+   .|+||++||..+..+.++..
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSCCTTTH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccCcccch
Confidence            999999999999997532   345678999999999999999999999999887654   68999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      .|++||+|+.+|+|+++.||+++|||||+|+||+++|++.....         ..++..+....  ..|++|+++|||||
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~---------~~~~~~~~~~~--~~Pl~R~g~peevA  227 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG---------GFNTILKEIKE--RAPLKRNVDQVEVG  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT---------THHHHHHHHHH--HSTTSSCCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc---------CCHHHHHHHHh--cCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999999999875422         22232222222  23789999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++||+|+.++|+||++|.+|||++.
T Consensus       228 ~~v~fL~Sd~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          228 KTAAYLLSDLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCccCCEEEECcCHHh
Confidence            999999999999999999999999974

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.9e-51  Score=350.19  Aligned_cols=257  Identities=24%  Similarity=0.273  Sum_probs=222.4

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      |+..++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++       ++.++.+|++|.+++++++++
T Consensus         1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            4456889999999999999999999999999999999999987776655432       267788999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...
T Consensus        81 ~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  158 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVA  158 (265)
T ss_dssp             HHHHHCSCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchh
Confidence            999999999999999986 456888999999999999999999999999999998765 799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+||+|+||+++|++........ ......++............|.+|+++|+|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  237 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAR-EERELDWAQWTAQLARNKQIPLGRLGKPIEAAR  237 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-------CHHHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhh-hhhccCHHHHHHHHhhccCCCcCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999987654211 111123344444444333358899999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++.+.|+||++|.+|||++++
T Consensus       238 ~v~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          238 AILFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHHHHhCchhcCcCCCEEEECCCCcCC
Confidence            999999999999999999999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-50  Score=345.02  Aligned_cols=253  Identities=26%  Similarity=0.322  Sum_probs=223.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ...|++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     ++.++.+|++|+++++++++++.++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988777766543     3678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+++  |+||++||..+..+.++...|++|
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~as  163 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMA  163 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCCTTCHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCCCccHHHHHH
Confidence            999999999999876667899999999999999999999999999999998753  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|++++||+||+|+||+++|++....+..........+++.......  ..|.+|+.+|+|+|++++|
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA--GSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT--TSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc--cCCcccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998876644333333344444333332  3477999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++.+.++||++|.+|||+++
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.6e-50  Score=342.81  Aligned_cols=244  Identities=33%  Similarity=0.487  Sum_probs=217.3

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988777665543     367889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      ++|++|+||||||+... .++ +.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        86 ~~g~id~lv~nAg~~~~-~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  162 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGP-KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGS  162 (256)
T ss_dssp             HHSCCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHHHH
Confidence            99999999999998743 456 899999999999999999999999999998865 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....         .++.......   ..|.+|+.+|+|+|++++
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~---~~p~~r~~~~~dva~~~~  230 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL---------TPEIERAMLK---HTPLGRLGEAQDIANAAL  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC---------CHHHHHHHHT---TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc---------CHHHHHHHHh---cCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999876542         2333333322   237799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ||+++.+.++||++|.+|||++..
T Consensus       231 ~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          231 FLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHcCCcccCccCCEEEECCCcccc
Confidence            999999999999999999998754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-50  Score=345.33  Aligned_cols=246  Identities=31%  Similarity=0.413  Sum_probs=218.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++      ++.++.+|++|.++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999987776654432      367889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++...|++
T Consensus        95 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (266)
T 4egf_A           95 AFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT  173 (266)
T ss_dssp             HHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence            9999999999999874 468889999999999999999999999999999988655689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++....+.        .+........   ..|.+|+.+|+|+|++++
T Consensus       174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~---~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          174 SKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG--------DEAKSAPMIA---RIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC--------SHHHHHHHHT---TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc--------ChHHHHHHHh---cCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999765431        1222222222   347799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ||+++.+.++||++|.+|||++++
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~~  266 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTMG  266 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCchhcCccCcEEEECCCccCC
Confidence            999999999999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.7e-50  Score=347.97  Aligned_cols=256  Identities=34%  Similarity=0.457  Sum_probs=219.3

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----------------hHHHHHHHhhh-----CCeEEEecC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL----------------DELGAALASTI-----GGRYIHCDV   70 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----------------~~~~~~~~~~~-----~~~~~~~D~   70 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+                .+.++++.+.+     ++.++.+|+
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            457899999999999999999999999999999999876                55555554432     367889999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           71 TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        71 ~~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      +|.++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.++++.|+||++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999999999999999999999999998755556889999999999999999999999999999988655689999999


Q ss_pred             chhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHH-hhhc--cCCCCHHHHHHHHhhcC
Q 023708          151 SAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR-KYLG--KADMKPEEVCKMVRDSG  227 (278)
Q Consensus       151 ~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~  227 (278)
                      ..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++...... ....  .....+...........
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             hhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999998753211 1111  11223344444333444


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       228 ~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..| +|+++|+|+|++++||+++.+.|+||++|.+|||+++
T Consensus       246 ~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          246 TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            556 8999999999999999999999999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.4e-50  Score=340.24  Aligned_cols=241  Identities=30%  Similarity=0.488  Sum_probs=216.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+.++  ..++.+|++|+++++++++++.+++|++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999999999888777766543  5678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        85 D~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (248)
T 3op4_A           85 DILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAAKAGV  162 (248)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence            99999999874 46788999999999999999999999999999998765 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|++++||+||+|+||+++|++....          .++........   .|.+|+.+|+|+|++++||+++
T Consensus       163 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~~---~p~~r~~~p~dva~~v~~L~s~  229 (248)
T 3op4_A          163 IGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL----------NDEQRTATLAQ---VPAGRLGDPREIASAVAFLASP  229 (248)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS----------CHHHHHHHHHT---CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc----------CHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999986431          22333333322   3679999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ++.++||++|.+|||+++
T Consensus       230 ~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          230 EAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             ccCCccCcEEEECCCeec
Confidence            999999999999999874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-50  Score=340.30  Aligned_cols=245  Identities=30%  Similarity=0.449  Sum_probs=217.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++      ++.++.+|++|+++++++++++.+
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988777665543      367889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~  164 (278)
                      ++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+. .+.++...|+
T Consensus        85 ~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           85 EFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHSCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChhhH
Confidence            999999999999986 446889999999999999999999999999999998865 6899999999986 7888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+||+|+||+++|++....          .++.......   ..|.+|+.+|+|+|+++
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~r~~~p~dva~~v  229 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN----------GEEYIASMAR---SIPAGALGTPEDIGHLA  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT----------CHHHHHHHHT---TSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999986531          2222233322   34779999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCcC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +||+++++.++||++|.+|||+++...
T Consensus       230 ~~L~s~~~~~itG~~i~vdGG~~~~~~  256 (262)
T 3pk0_A          230 AFLATKEAGYITGQAIAVDGGQVLPES  256 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTCCSS
T ss_pred             HHHhCccccCCcCCEEEECCCeecCcc
Confidence            999999999999999999999987643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9.9e-50  Score=341.68  Aligned_cols=253  Identities=34%  Similarity=0.504  Sum_probs=222.0

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+++...++.++.+  +.++.+|++|.++++++++++.+.+|
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999999999999999888877766654  56789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++||+
T Consensus       101 ~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  178 (277)
T 4dqx_A          101 RVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKG  178 (277)
T ss_dssp             CCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHHHHH
Confidence            999999999986 446788999999999999999999999999999998765 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|+++++.|++++||+||+|+||.++|++....+..     ...+........  ...|.+|+.+|+|+|++++||+
T Consensus       179 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          179 AISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE-----AKDPAKLRSDFN--ARAVMDRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT-----CSCHHHHHHHHH--TTSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc-----ccchhHHHHHHH--hcCcccCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999996554421     112222222122  2347799999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccCcCc
Q 023708          249 SEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      ++.+.++||++|.+|||++++.+.
T Consensus       252 s~~~~~itG~~i~vdGG~~~~~~~  275 (277)
T 4dqx_A          252 SDRSRFATGSILTVDGGSSIGNHL  275 (277)
T ss_dssp             SGGGTTCCSCEEEESSSSSSCCTT
T ss_pred             CCccCCCcCCEEEECCchhhhhcc
Confidence            999999999999999999987654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5e-50  Score=342.50  Aligned_cols=243  Identities=26%  Similarity=0.326  Sum_probs=217.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++     ++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            5789999999999999999999999999999999999988777765543     36678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus       102 g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          102 IDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             CCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHHHHH
Confidence            9999999999986 446888999999999999999999999999999998865 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++|+++++.|++++||+||+|+||+++|++......        .++........   .|.+|+++|+|+|++++||
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~---~p~~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALID--------NPEFDAWVKAR---TPAKRWGKPQELVGTAVFL  248 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHH--------CHHHHHHHHHH---STTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhccc--------CHHHHHHHHhc---CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999876531        12222222222   3679999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++.+.++||++|.+|||++.
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCccccCCCCcEEEECCCeec
Confidence            999999999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=9.5e-50  Score=345.45  Aligned_cols=259  Identities=31%  Similarity=0.411  Sum_probs=216.9

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc------------hHHHHHHHhhh-----CCeEEEecCC
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL------------DELGAALASTI-----GGRYIHCDVT   71 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~~-----~~~~~~~D~~   71 (278)
                      ..+..++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++     ++.++.+|++
T Consensus        20 ~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   99 (299)
T 3t7c_A           20 GSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR   99 (299)
T ss_dssp             --CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             cccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC
Confidence            334567899999999999999999999999999999999876            55555444332     3678899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           72 KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        72 ~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      |.++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.++++.|+||++||.
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            99999999999999999999999999987665558899999999999999999999999999999876557999999999


Q ss_pred             hhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHh-hhcc--CCCCHHHHHHHHhhcCC
Q 023708          152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK-YLGK--ADMKPEEVCKMVRDSGS  228 (278)
Q Consensus       152 ~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~  228 (278)
                      .+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++....... ....  .................
T Consensus       180 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (299)
T 3t7c_A          180 GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV  259 (299)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc
Confidence            99999999999999999999999999999999999999999999999987532211 1100  11122222222223333


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .| +|+.+|+|+|++++||+++++.|+||++|.+|||+++
T Consensus       260 ~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          260 LP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            45 8899999999999999999999999999999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.1e-50  Score=341.35  Aligned_cols=243  Identities=28%  Similarity=0.448  Sum_probs=216.3

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+.+     ++.++.+|++|.++++++++++.+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988777665443     467889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus       102 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          102 EFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchhHHH
Confidence            999999999999986 446788999999999999999999999999999998765 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||++++.|+++++.|++++||+||+|+||.++|++....          .++.......   ..|.+|+.+|||+|++++
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~---~~p~~r~~~pedvA~~v~  246 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL----------PQEQQTALKT---QIPLGRLGSPEDIAHAVA  246 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS----------CHHHHHHHHT---TCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc----------CHHHHHHHHh---cCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999987542          2222222222   347799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++.+.++||++|.+|||+++
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          247 FLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHhCCCcCCccCcEEEECCCccc
Confidence            99999999999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1e-49  Score=342.28  Aligned_cols=247  Identities=30%  Similarity=0.395  Sum_probs=218.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+++..++..+++        .+.++.+|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988777665543        356788999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCCCCChh
Confidence            9999999999999999865667889999999999999999999999999999998865 789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+||+|+||+++|++......        .++........   .|.+|+++|+|+|+
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~---~p~~r~~~~~dva~  232 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE--------SAELSSDYAMC---TPLPRQGEVEDVAN  232 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--------CHHHHHHHHHH---CSSSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc--------CHHHHHHHHhc---CCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999876431        22222333332   26799999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++...++||++|.+|||+++.
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            999999999999999999999999876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.3e-49  Score=337.74  Aligned_cols=252  Identities=34%  Similarity=0.470  Sum_probs=218.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++  +.++.+|++|+++++++++++.+++|++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999999999888887776653  5788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..|+||++||..+..+.++...|++||+++
T Consensus        84 d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (259)
T 4e6p_A           84 DILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAV  162 (259)
T ss_dssp             CEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHH
Confidence            9999999986 446888999999999999999999999999999998865568999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc-cCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG-KADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++|+++++.|++++||+||+|+||.++|++.......... ......+........   .|.+|+++|+|+|++++||++
T Consensus       163 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~r~~~~~dva~~v~~L~s  239 (259)
T 4e6p_A          163 ISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEA---VPFGRMGTAEDLTGMAIFLAS  239 (259)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHH---STTSSCBCTHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhcc---CCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999987654211100 011122222222222   367999999999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.+.++||++|++|||+++
T Consensus       240 ~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          240 AESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCCCCCEEEECcChhc
Confidence            9999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=5.5e-50  Score=337.84  Aligned_cols=243  Identities=30%  Similarity=0.435  Sum_probs=215.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..++..++++  +.++.+|++|.++++++++++.+.+|++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            36889999999999999999999999999999999999888887766654  5678899999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++...|++||+++
T Consensus        82 d~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  160 (247)
T 3rwb_A           82 DILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV  160 (247)
T ss_dssp             SEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHH
Confidence            9999999987 456888999999999999999999999999999998865468999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|++++||+||+|+||+++|++.....          +..........  .|++|+.+|||+|++++||+++
T Consensus       161 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----------~~~~~~~~~~~--~~~~r~~~pedva~~v~~L~s~  228 (247)
T 3rwb_A          161 IGFTRALATELGKYNITANAVTPGLIESDGVKASP----------HNEAFGFVEML--QAMKGKGQPEHIADVVSFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG----------GGGGHHHHHHH--SSSCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC----------hhHHHHHHhcc--cccCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999875421          11111112211  2568999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ++.++||++|.+|||++.
T Consensus       229 ~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          229 DARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             cccCCCCCEEEECCCccC
Confidence            999999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-50  Score=345.32  Aligned_cols=253  Identities=36%  Similarity=0.449  Sum_probs=219.2

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988887776654     2567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSL  165 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~  165 (278)
                      +|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+. .+.++...|++
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhHHH
Confidence            999999999999876667889999999999999999999999999999998865 7899999999998 78888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....      ....++.......   ..|.+|+.+|+|+|++++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~---~~p~~r~~~pedvA~~v~  232 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL------PGAAPETRGFVEG---LHALKRIARPEEIAEAAL  232 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGS------TTCCTHHHHHHHT---TSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhc------cccCHHHHHHHhc---cCccCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999865321      0112222222222   236789999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccCcCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTGTSSMS  274 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~~~~~~  274 (278)
                      ||+++.+.++||++|.+|||+++..+.+.
T Consensus       233 ~L~s~~a~~itG~~i~vdGG~~~~~~a~~  261 (280)
T 3tox_A          233 YLASDGASFVTGAALLADGGASVTKAAEN  261 (280)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCC----
T ss_pred             HHhCccccCCcCcEEEECCCccccccccc
Confidence            99999999999999999999998776554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-49  Score=340.02  Aligned_cols=250  Identities=31%  Similarity=0.393  Sum_probs=217.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+++..++..+++  ++.++.+|++|.++++++++++.+.+|
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999999999987777766654  367889999999999999999999999


Q ss_pred             CccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ++|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTK  163 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHHHH
Confidence            99999999998733 55788999999999999999999999999999998865 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++|+++++.|++++||+||+|+||.++|++.....         ..+.......   ..|.+|+++|+|+|++++||
T Consensus       164 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~---~~~~~r~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          164 AAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL---------PQPIVDIFAT---HHLAGRIGEPHEIAELVCFL  231 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------------CHHHHHHHHT---TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC---------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999865322         2222222222   23679999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTSSM  273 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~~~  273 (278)
                      +++.+.++||++|.+|||+....|.+
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~~~~~~  257 (271)
T 3tzq_B          232 ASDRAAFITGQVIAADSGLLAHLPGL  257 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTTTTBCTTH
T ss_pred             hCcccCCcCCCEEEECCCccccCCCc
Confidence            99999999999999999955554443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.9e-49  Score=336.57  Aligned_cols=244  Identities=26%  Similarity=0.323  Sum_probs=214.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|++|||||++|||++++++|+++|++|+++ +|+++..+++.+++     ++.++.+|++|.++++++++++.+.+|+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999986 88877776665543     3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++||++
T Consensus        83 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            99999999976 456889999999999999999999999999999998865 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++|+++++.|++++||+||+|+||+++|++.....         ..++. ......   .|.+|+.+|+|+|++++||+
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~---~p~~r~~~~~dva~~v~~L~  228 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP---------NREDLLEDARQN---TPAGRMVEIKDMVDTVEFLV  228 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT---------THHHHHHHHHHH---CTTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc---------cCHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999875421         11222 222222   36799999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccCcCcc
Q 023708          249 SEEAGFITAHNLVIDGGYTTGTSSM  273 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~~~~~  273 (278)
                      ++.+.++||++|.+|||++...+..
T Consensus       229 s~~~~~itG~~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          229 SSKADMIRGQTIIVDGGRSLLVLEH  253 (258)
T ss_dssp             SSTTTTCCSCEEEESTTGGGBCC--
T ss_pred             CcccCCccCCEEEECCCccCCCCCC
Confidence            9999999999999999999876654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.3e-49  Score=339.32  Aligned_cols=253  Identities=34%  Similarity=0.481  Sum_probs=215.5

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhh
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +|+..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.++++  +.++.+|++|+++++++++++.+.
T Consensus        21 sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           21 SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             ------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            456678999999999999999999999999999999999999888887776653  678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus       101 ~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          101 FGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             HSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHH
Confidence            99999999999987 446788999999999999999999999999999998865 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|+++++.|++++||+||+|+||+++|++...........  ..........    ..|.+|+.+|||+|++++|
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~r~~~pedvA~~v~~  252 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGA--LGAGGARSMI----ARLQGRMAAPEEMAGIVVF  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC--------CCHHHHH----HHHHSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhh--HHHHhhhhhh----hccccCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999987644210000  0000001000    1145889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++++.++||++|.+|||++..
T Consensus       253 L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          253 LLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HcCCccCCccCcEEEECCcchhc
Confidence            99999999999999999998753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.5e-49  Score=339.52  Aligned_cols=251  Identities=27%  Similarity=0.366  Sum_probs=215.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      -+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++     ++.++.+|++|.++++++++++.+.+|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999988777665543     367889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH--HHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK--AMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|  .|.+++ .|+||++||..+..+.++...|++|
T Consensus       101 ~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A          101 PIGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             SCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHH
Confidence            999999999986 446888999999999999999999999999999  576655 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|++++||+||+|+||+++|++................++.......  ..|.+|+.+|||+|++++|
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~pedvA~~v~~  256 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA--KIPLGRYSTPEEVAGLVGY  256 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT--TCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh--cCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998765532222222233333333332  3477999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++.+.++||++|.+|||++.
T Consensus       257 L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          257 LVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HTSSGGGGCCSCEEEESTTCCC
T ss_pred             HhCccccCcCCcEEEECCCccC
Confidence            9999999999999999999874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=9.1e-50  Score=339.98  Aligned_cols=241  Identities=27%  Similarity=0.420  Sum_probs=205.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.++.+  +.++.+|++|+++++++++++.+.+|++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999999888887766654  6678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus       103 D~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  180 (266)
T 3grp_A          103 DILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGL  180 (266)
T ss_dssp             CEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhHHHHHHHH
Confidence            9999999986 346788899999999999999999999999999998765 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|++++||+||+|+||+++|++....          .++.......   ..|.+|+++|||+|++++||+++
T Consensus       181 ~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~r~~~~edvA~~v~~L~s~  247 (266)
T 3grp_A          181 IGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL----------NEKQKEAIMA---MIPMKRMGIGEEIAFATVYLASD  247 (266)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC----------CHHHHHHHHT---TCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999986531          2222222222   24779999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      .+.++||++|.+|||+++
T Consensus       248 ~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          248 EAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GGTTCCSCEEEESTTC--
T ss_pred             cccCccCCEEEECCCeee
Confidence            999999999999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.3e-50  Score=344.37  Aligned_cols=247  Identities=30%  Similarity=0.372  Sum_probs=212.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     ++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999988887776654     35688999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--CCCCCchhhh
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--GGLASHAYSL  165 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~  165 (278)
                      |++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...|++
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~~~Y~a  182 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTA  182 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCchHHHH
Confidence            99999999999875657889999999999999999999999999999998865 79999999999987  7788999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH--HHhhcCCCCC--CCCCCHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK--MVRDSGSLLR--GRSASIEDVA  241 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~edva  241 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++......        .++....  ........|.  +|+++|||+|
T Consensus       183 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA  254 (283)
T 3v8b_A          183 TKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL--------RHEEETAIPVEWPKGQVPITDGQPGRSEDVA  254 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB--------CCHHHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc--------ccchhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence            99999999999999999999999999999999998653210        1111000  0001112244  8999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++||+++.+.++||++|.+|||+++
T Consensus       255 ~~v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          255 ELIRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHcCccccCCcCCEEEECcCccc
Confidence            999999999999999999999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.1e-49  Score=339.66  Aligned_cols=249  Identities=24%  Similarity=0.286  Sum_probs=217.5

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +...|++|++|||||++|||++++++|+++|++|++++|+.+...+..+++      ++.++.+|++|.++++++++++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999987766554433      36788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|+
T Consensus       101 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  178 (277)
T 4fc7_A          101 KEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAG  178 (277)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHH
T ss_pred             HHcCCCCEEEECCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHH
Confidence            9999999999999976 446788999999999999999999999999999997755 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+||+|+||++.|++......       ..++.......   ..|++|+++|+|+|+++
T Consensus       179 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~---~~p~~r~~~p~dvA~~v  248 (277)
T 4fc7_A          179 SAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLG-------GPQASLSTKVT---ASPLQRLGNKTEIAHSV  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHS-------CCHHHHHHHHH---TSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhcc-------CCHHHHHHHhc---cCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999987543321       12222333322   23779999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCcC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +||+++.+.++||++|.+|||+++..+
T Consensus       249 ~fL~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          249 LYLASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             HHHcCCccCCcCCCEEEECCCcccCCC
Confidence            999999999999999999999987543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.7e-49  Score=341.36  Aligned_cols=243  Identities=30%  Similarity=0.443  Sum_probs=216.3

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999987777665553      366789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~  164 (278)
                      .+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+. .+.++...|+
T Consensus       116 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~  193 (293)
T 3rih_A          116 AFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYG  193 (293)
T ss_dssp             HHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHH
Confidence            999999999999987 446788999999999999999999999999999998865 6899999999986 7889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.|+++++.|++++||+||+|+||++.|++....          .++.......   ..|.+|+++|+|+|+++
T Consensus       194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~r~~~p~dvA~~v  260 (293)
T 3rih_A          194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM----------GEEYISGMAR---SIPMGMLGSPVDIGHLA  260 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT----------CHHHHHHHHT---TSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc----------cHHHHHHHHh---cCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999987542          1222222222   34779999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +||+++.+.++||++|.+|||+++.
T Consensus       261 ~fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          261 AFLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             HHHhCccccCCCCCEEEECCCccCC
Confidence            9999999999999999999999874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=4.8e-49  Score=336.08  Aligned_cols=258  Identities=29%  Similarity=0.390  Sum_probs=219.4

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +....++++|++|||||++|||+++|++|+++|++|++++|+++...     ....++.+|++|.++++++++++.+.+|
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34456889999999999999999999999999999999999875431     1456889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..++.+.++...|++||+
T Consensus        81 ~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  158 (269)
T 3vtz_A           81 RIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKH  158 (269)
T ss_dssp             CCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHHHHHH
Confidence            999999999986 446788999999999999999999999999999998765 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC-HHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK-PEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++|+++++.|+++ +|+||+|+||.++|++............... .+.......   ..|.+|+.+|+|+|++++||
T Consensus       159 a~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~r~~~pedvA~~v~~L  234 (269)
T 3vtz_A          159 ALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---QHPMGRIGRPEEVAEVVAFL  234 (269)
T ss_dssp             HHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---HSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999998 9999999999999999876543221111111 112222222   23679999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcCcccccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTSSMSFIY  277 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~~~~~~~  277 (278)
                      +++.+.++||++|.+|||++...+..++..
T Consensus       235 ~s~~~~~itG~~i~vdGG~~~~~~~~~p~~  264 (269)
T 3vtz_A          235 ASDRSSFITGACLTVDGGLLSKLPISTPNA  264 (269)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBCCCCCCCC
T ss_pred             hCCccCCCcCcEEEECCCccccCCCCCCCc
Confidence            999999999999999999999988888765

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=8.1e-49  Score=334.35  Aligned_cols=252  Identities=27%  Similarity=0.309  Sum_probs=217.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+++..++..+++       .+.++.+|++++++++++++   
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~---   81 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE---   81 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence            46789999999999999999999999999999999999987776655433       24578899999998877664   


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                       ++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|+
T Consensus        82 -~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           82 -KYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             -HCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHHHH
T ss_pred             -hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchHHH
Confidence             5789999999999874 46788999999999999999999999999999998765 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH-HHh-hcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK-MVR-DSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~edva~  242 (278)
                      +||+++++|+++++.|++++||+||+|+||.++|++..............++++... ... ..+..|++|+++|||+|+
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            999999999999999999999999999999999999887765544444444444332 222 233357799999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++.+.++||++|.+|||++..
T Consensus       239 ~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          239 LVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999998764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-49  Score=339.65  Aligned_cols=253  Identities=27%  Similarity=0.398  Sum_probs=206.3

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..+|++|++|||||++|||+++|++|+++|++|++++| ..+..+++.+++      .+.++.+|++|.++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999998 555555544332      35678899999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|+
T Consensus       100 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHTSSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchHHH
Confidence            9999999999999986 446788999999999999999999999999999998865 79999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +||+++++|+++++.|++++||+||+|+||.++|++...............+++. ....  ....|.+|+++|+|+|++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM--LKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHH--HhcCCCCCccCHHHHHHH
Confidence            9999999999999999999999999999999999997654422111111112211 1111  122477999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++.+.++||++|.+|||++.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-49  Score=336.68  Aligned_cols=247  Identities=27%  Similarity=0.355  Sum_probs=214.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++     ++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999988887776654     36778999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++...|++||
T Consensus        82 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           82 GRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            9999999999976 446889999999999999999999999999999996655479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHC-CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELG-KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +++++|+++++.|++ ++||+||+|+||+++|++.......       .++......   ...|.+|+.+|||+|++++|
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-------~~~~~~~~~---~~~p~~r~~~pedvA~~v~~  230 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-------SEEMAKRTI---QSVPLGRLGTPEEIAGLAYY  230 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------------CCSHHHH---TTSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-------CHHHHHHHH---hcCCCCCCcCHHHHHHHHHH
Confidence            999999999999997 6799999999999999975432100       111111121   23477999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccCc
Q 023708          247 LASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      |+++.+.++||++|.+|||+++..
T Consensus       231 L~s~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          231 LCSDEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTSCC
T ss_pred             HcCchhcCccCCEEEECCCcccCC
Confidence            999999999999999999998753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.2e-49  Score=337.60  Aligned_cols=243  Identities=31%  Similarity=0.446  Sum_probs=213.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999877766655443     477899999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--CCCchh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--LASHAY  163 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~Y  163 (278)
                      ++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.  ++...|
T Consensus       106 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            999999999999987 44678899999999999999999999999999999886645899999999988764  356789


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.....           +......   ...|.+|+.+|||+|++
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-----------~~~~~~~---~~~p~~r~~~pedvA~~  250 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA-----------DYHALWE---PKIPLGRMGRPEELTGL  250 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG-----------GGHHHHG---GGSTTSSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch-----------HHHHHHH---hcCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999875421           1111222   22477999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++.+.++||++|.+|||++.
T Consensus       251 v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          251 YLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHcCccccCccCcEEEECcCccC
Confidence            9999999999999999999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-49  Score=340.73  Aligned_cols=253  Identities=32%  Similarity=0.428  Sum_probs=210.8

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-------------chHHHHHHHhhh-----CCeEEEecCCC
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-------------LDELGAALASTI-----GGRYIHCDVTK   72 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-------------~~~~~~~~~~~~-----~~~~~~~D~~~   72 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|             +.+..++..+.+     ++.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            345789999999999999999999999999999999988             555555544332     36778999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           73 EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        73 ~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++..|+||++||..
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            99999999999999999999999999874 46788999999999999999999999999999998865568999999999


Q ss_pred             hhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhcc-CCCCHHHHHHHHhhcCCCCC
Q 023708          153 AIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       153 ~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  231 (278)
                      +..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++........... ....++ .....  ....| 
T Consensus       164 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~p-  239 (277)
T 3tsc_A          164 GMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ-LSHVL--TPFLP-  239 (277)
T ss_dssp             GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG-GTTTT--CCSSS-
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH-HHHHh--hhccC-
Confidence            99999999999999999999999999999999999999999999999875422100000 000000 00001  11223 


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .|+.+|||+|++++||+++.+.++||++|.+|||++.
T Consensus       240 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          240 DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            3799999999999999999999999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-48  Score=335.90  Aligned_cols=255  Identities=30%  Similarity=0.362  Sum_probs=213.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc------------hHHHHHHHhhh-----CCeEEEecCCCHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL------------DELGAALASTI-----GGRYIHCDVTKEE   74 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~~-----~~~~~~~D~~~~~   74 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+            .+...+..+.+     ++.++.+|++|.+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            357899999999999999999999999999999999996            44444433321     3678899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           75 DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        75 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      +++++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  162 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc
Confidence            99999999999999999999999986 446788999999999999999999999999999998865 7999999999999


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHh-hhcc--CCCCHHHHHHHHhhcCCCCC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK-YLGK--ADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~  231 (278)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||.++|++....... ....  ..................+ 
T Consensus       163 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (281)
T 3s55_A          163 SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-  241 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-
Confidence            99999999999999999999999999999999999999999999987542210 0000  0011222222222333334 


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +|+.+|+|+|++++||+++...++||++|.+|||++..
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            88999999999999999999999999999999998753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.7e-49  Score=334.69  Aligned_cols=255  Identities=28%  Similarity=0.388  Sum_probs=213.7

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHH
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~   80 (278)
                      ..++...+|++|++|||||++|||+++|++|+++|++|++++++ .+..+++.+++     ++.++.+|++|.+++++++
T Consensus         8 ~~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   87 (270)
T 3is3_A            8 SETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLF   87 (270)
T ss_dssp             ---CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             ccccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            34445668999999999999999999999999999999997654 44444444332     3678899999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch-hhcCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA-AIMGGLA  159 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~  159 (278)
                      +++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||.. ...+.++
T Consensus        88 ~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  163 (270)
T 3is3_A           88 DQAVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPK  163 (270)
T ss_dssp             HHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCCCC
Confidence            99999999999999999987 4568899999999999999999999999999999965   57999999988 5678889


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccC-CCCHHHHHHHHhhcCCCCCCCCCCHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA-DMKPEEVCKMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (278)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++............ ...+++........  .|++|+++|+
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~p~  241 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA--SPLHRNGWPQ  241 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH--STTCSCBCHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc--CCCCCCCCHH
Confidence            99999999999999999999999999999999999999999875432221110 12333333333322  3779999999


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      |+|++++||+++.+.++||++|.+|||++
T Consensus       242 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          242 DVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999999999974

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.9e-49  Score=334.96  Aligned_cols=247  Identities=28%  Similarity=0.356  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++  ++.++.+|++|.++++++++++.+.+|++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999999998888777654  36788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++   .|+||++||..+..+.++...|++||+++
T Consensus        84 d~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asKaa~  159 (255)
T 4eso_A           84 DLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHPGMSVYSASKAAL  159 (255)
T ss_dssp             EEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            9999999986 4568899999999999999999999999999999865   57999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++|+++++.|++++||+||+|+||+++|++....        ........... ......|.+|+.+|||+|++++||++
T Consensus       160 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          160 VSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA--------GITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT--------TSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCcEEEEEecCcccCcccccc--------cCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999975321        01111111111 11112377999999999999999999


Q ss_pred             CCCCCceeeEEeecCCcccCcCc
Q 023708          250 EEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      + +.++||++|.+|||++.....
T Consensus       232 ~-~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          232 E-ATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             T-CTTCCSCEEEESTTTTTTBCC
T ss_pred             c-CcCccCCEEEECCCccccCcC
Confidence            8 899999999999999876543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8e-49  Score=333.07  Aligned_cols=250  Identities=32%  Similarity=0.420  Sum_probs=207.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++++|++|||||++|||+++|++|+++|++|++++|+++..+++.++++  +.++.+|++|.++++++++++.+.++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57889999999999999999999999999999999999988888776654  6788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC---CCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ---RKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++   ..++||++||..+..+.++...|++||
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK  164 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHH
Confidence            99999999876567788899999999999999999999999999998642   257899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++|+++++.|++++||+|++|+||.++|++.......       ..++......  ...|.+|+.+|||+|++++||
T Consensus       165 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l  235 (261)
T 3n74_A          165 GWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGE-------DSEEIRKKFR--DSIPMGRLLKPDDLAEAAAFL  235 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhccc-------CcHHHHHHHh--hcCCcCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999987654321       1111111111  223678999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcC
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +++...++||++|.+|||++++..
T Consensus       236 ~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          236 CSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             TSGGGTTCCSCEEEESTTTTC---
T ss_pred             cCCcccCcCCcEEEecCCcccCCC
Confidence            999999999999999999998764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.2e-48  Score=333.63  Aligned_cols=241  Identities=30%  Similarity=0.479  Sum_probs=211.4

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |+..++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+.+     ++.++.+|++|.++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5556789999999999999999999999999999999888 555555444332     3678899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      .+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|
T Consensus       101 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  178 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANY  178 (269)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhH
Confidence            99999999999999987 446788999999999999999999999999999998765 7899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+++++|+++++.|++++||+||+|+||.++|++......             ....   ...|.+|+++|+|+|++
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~---~~~p~~r~~~~~dvA~~  242 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------EKLL---EVIPLGRYGEAAEVAGV  242 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------HHHG---GGCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------HHHH---hcCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999998754321             1111   22367999999999999


Q ss_pred             HHHhccC-CCCCceeeEEeecCCccc
Q 023708          244 ALFLASE-EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~-~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++ .+.++||++|.+|||+++
T Consensus       243 v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          243 VRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HHHHhCCcccCCCcCCEEEECCCeec
Confidence            9999997 788999999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.3e-48  Score=328.83  Aligned_cols=235  Identities=24%  Similarity=0.319  Sum_probs=208.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecC--CCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDV--TKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~--~~~~~i~~~~~~~~   84 (278)
                      ..|++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++      .+.++.+|+  +|.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988777665443      467899999  99999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|+
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCCchhH
Confidence            99999999999999875667889999999999999999999999999999998865 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|+++. |+||+|+||+++|++.......                     .+..++.+|+|+|+++
T Consensus       167 asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~---------------------~~~~~~~~p~dva~~~  224 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT---------------------EDPQKLKTPADIMPLY  224 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT---------------------CCGGGSBCTGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc---------------------cchhccCCHHHHHHHH
Confidence            99999999999999999887 9999999999999987543210                     0124578999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      +||+++++.++||++|.+|||...+.
T Consensus       225 ~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          225 LWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             HHHHSGGGTTCCSCEEESSCC-----
T ss_pred             HHHcCccccCCCCCEEEeCCCcCCCC
Confidence            99999999999999999999997653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1e-48  Score=335.03  Aligned_cols=243  Identities=27%  Similarity=0.402  Sum_probs=213.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++     .+.++.+|++|.++++++++++.+.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999876666555443     3678899999999999999999887


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       |++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+....|++|
T Consensus       108 -g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          108 -APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             -SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhHHH
Confidence             9999999999986 446788999999999999999999999999999998765 7999999999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|++++||+||+|+||+++|++.......       .++..........  |.+|+++|||+|++++|
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~--p~~r~~~pedvA~~v~f  255 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ-------DPEGWDEYVRTLN--WMGRAGRPEEMVGAALF  255 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH-------CHHHHHHHHHHHS--TTCSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc-------ChHHHHHHHhhcC--ccCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999987654321       2333333333321  56999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCc
Q 023708          247 LASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~  266 (278)
                      |+++.++++||++|.+|||+
T Consensus       256 L~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          256 LASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHSGGGTTCCSCEEEESSCC
T ss_pred             HcCcccCCCCCCEEEeCCCC
Confidence            99999999999999999996

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.5e-48  Score=328.86  Aligned_cols=239  Identities=29%  Similarity=0.450  Sum_probs=209.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||++|||+++|++|+++|++|+++++ +.+..+++.+++     ++.++.+|++|.++++++++++.+++|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999998876 445555444332     356789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            9999999999864 46788999999999999999999999999999998765 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|+++++.|++++||++|+|+||+++|++....          .++.......   ..|.+|+++|+|+|++++||+
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----------SDELKEQMLT---QIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS----------CHHHHHHHHT---TCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999975421          2332233322   247799999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...++||++|++|||+++
T Consensus       227 s~~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          227 SDKAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CccccCCCCCEEEeCCCccC
Confidence            99999999999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-48  Score=334.51  Aligned_cols=251  Identities=29%  Similarity=0.382  Sum_probs=211.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-------------chHHHHHHHhhh-----CCeEEEecCCCH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-------------LDELGAALASTI-----GGRYIHCDVTKE   73 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-------------~~~~~~~~~~~~-----~~~~~~~D~~~~   73 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|             +.+..+++.+.+     ++.++.+|++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            34789999999999999999999999999999999987             556665554432     356788999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           74 EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        74 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++..|+||++||..+
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            9999999999999999999999999874 468889999999999999999999999999999988654789999999999


Q ss_pred             hcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHh-hhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          154 IMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK-YLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       154 ~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      ..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++....... ....   .+.. ..........|. 
T Consensus       169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~-  243 (280)
T 3pgx_A          169 LKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFAR---HPSF-VHSFPPMPVQPN-  243 (280)
T ss_dssp             TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHH---CGGG-GGGSCCBTTBCS-
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhc---Cchh-hhhhhhcccCCC-
Confidence            999999999999999999999999999999999999999999999987542110 0000   0000 000001122244 


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+.+|+|+|++++||+++...++||++|.+|||++.
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            789999999999999999999999999999999864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.8e-48  Score=336.10  Aligned_cols=242  Identities=26%  Similarity=0.384  Sum_probs=211.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH-HHHHh---hh--CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG-AALAS---TI--GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~-~~~~~---~~--~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+.+.. +...+   ..  ++.++.+|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876532 22222   11  3678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.++...|++|
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  199 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSAT  199 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCCChhHHHH
Confidence            9999999999998766678889999999999999999999999999999854   5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|++++||+||+|+||.++|++.....         ..+.....   ....|.+|+++|+|+|++++|
T Consensus       200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~---~~~~p~~r~~~p~dvA~~v~~  267 (291)
T 3ijr_A          200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF---------DEKKVSQF---GSNVPMQRPGQPYELAPAYVY  267 (291)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS---------CHHHHHHT---TTTSTTSSCBCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC---------CHHHHHHH---HccCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999876532         22222222   223477999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |++++..++||++|.+|||+++.
T Consensus       268 L~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          268 LASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             HHSGGGTTCCSCEEEESSSCCCC
T ss_pred             HhCCccCCCcCCEEEECCCcccC
Confidence            99999999999999999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.3e-48  Score=336.57  Aligned_cols=255  Identities=33%  Similarity=0.433  Sum_probs=215.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc------------hHHHHHHHhhh-----CCeEEEecCCCHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL------------DELGAALASTI-----GGRYIHCDVTKEED   75 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~~-----~~~~~~~D~~~~~~   75 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+     ++.++.+|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35789999999999999999999999999999998875            44454443322     36788999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ++++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..|+||++||..+..
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            9999999999999999999999987 446788999999999999999999999999999998865568999999999999


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHH-hhhcc--CCCCHHHHHHHHhhcCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR-KYLGK--ADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      +.++...|++||++++.|+++++.|++++||+||+|+||+++|++...... .....  .....+............| +
T Consensus       201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  279 (317)
T 3oec_A          201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-I  279 (317)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-S
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-C
Confidence            999999999999999999999999999999999999999999998753211 11111  1122333344444444445 7


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++++|+|+|++++||+++.+.|+||++|.+|||+++.
T Consensus       280 ~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          280 PWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            8899999999999999999999999999999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=8.3e-49  Score=332.84  Aligned_cols=245  Identities=30%  Similarity=0.389  Sum_probs=200.6

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |+..++++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++     ++.++.+|++|.++++++++++
T Consensus         1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999998 55555554443332     3678999999999999999999


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCch
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHA  162 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~  162 (278)
                      .+++|++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+. .+.++...
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCSTTCHH
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCCCCcHH
Confidence            9999999999999998756678899999999999999999999999999999965   5799999999998 68888999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|+++. |+||+|+||+++|++......         ++.......   ..|.+|+++|+|+|+
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~---~~p~~r~~~pedva~  224 (259)
T 3edm_A          158 YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK---------PEVRERVAG---ATSLKREGSSEDVAG  224 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------------------CCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC---------hHHHHHHHh---cCCCCCCcCHHHHHH
Confidence            9999999999999999999886 999999999999998765421         111111111   236789999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      +++||+++++.++||++|.+|||++...
T Consensus       225 ~v~~L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          225 LVAFLASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             HHHHHcCccccCccCCEEEECCCcCCCC
Confidence            9999999999999999999999998654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-48  Score=335.22  Aligned_cols=253  Identities=26%  Similarity=0.333  Sum_probs=194.3

Q ss_pred             cccCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHH
Q 023708            4 RDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVE   77 (278)
Q Consensus         4 ~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~   77 (278)
                      |....+|+ .++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+++     ++.++.+|++|.++++
T Consensus        17 n~~~~~mm-~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (280)
T 4da9_A           17 NLYFQSMM-TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQ   95 (280)
T ss_dssp             ------CC-SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHH
T ss_pred             chhhhhhh-hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            33344443 3678999999999999999999999999999999985 666555554432     3678899999999999


Q ss_pred             HHHHHHHhhcCCccEEEECCccC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhh
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGIS-GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAI  154 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~  154 (278)
                      ++++++.+.+|++|+||||||+. ....++.+.+.++|++.+++|+.++++++++++|.|.+++  ..++||++||..+.
T Consensus        96 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A           96 ATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            99999999999999999999984 2446788999999999999999999999999999998743  25799999999999


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+++|++......          ........  ...|.+|+
T Consensus       176 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~--~~~p~~r~  243 (280)
T 4da9_A          176 MTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG----------KYDGLIES--GLVPMRRW  243 (280)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------------CC
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch----------hHHHHHhh--cCCCcCCc
Confidence            9999999999999999999999999999999999999999999998764321          11111111  12367999


Q ss_pred             CCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++|||+|++++||+++.+.++||++|.+|||++++
T Consensus       244 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          244 GEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             BCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            99999999999999999999999999999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-48  Score=329.62  Aligned_cols=241  Identities=28%  Similarity=0.434  Sum_probs=208.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|.+.. ++..+++     ++.++.+|++|.++++++.+. .+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhc
Confidence            57899999999999999999999999999999999976533 3333222     256889999999999999544 4566


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus       105 g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          105 RRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHHHHH
Confidence            9999999999987 446888999999999999999999999999999998866 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.|+++++.|++++||+||+|+||++.|++......        .++........   .|.+|+.+|+|+|++++||
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~---~p~~r~~~pedva~~v~~L  251 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA--------DDERAAEITAR---IPAGRWATPEDMVGPAVFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--------SHHHHHHHHHH---STTSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc--------CHHHHHHHHhc---CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999998765431        22223333333   3679999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++.+.++||++|.+|||++.
T Consensus       252 ~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          252 ASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhcCCcCCEEEECcCccC
Confidence            999999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-48  Score=333.39  Aligned_cols=239  Identities=26%  Similarity=0.331  Sum_probs=199.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+.+++|++|||||++|||+++|++|+++|++|+++ .|.++..+++.+.+     ++.++.+|++|.++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999987 44555555544332     367789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|++
T Consensus       102 ~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             HHSCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCCCchHHHH
Confidence            999999999999987 4568899999999999999999999999999999965   579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....         ..+......   ...|.+|+.+|+|+|++++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~---~~~p~~r~~~pedvA~~v~  245 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK---------SDEVRDRFA---KLAPLERLGTPQDIAGAVA  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------------CHHHHH---TSSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC---------CHHHHHHHH---hcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999875422         111112222   2237799999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCc
Q 023708          246 FLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ||+++.+.++||++|.+|||+
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          246 FLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HHHSTTTTTCCSEEEEESSSC
T ss_pred             HHhCccccCccCCEEEeCCCc
Confidence            999999999999999999996

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-47  Score=326.63  Aligned_cols=243  Identities=25%  Similarity=0.378  Sum_probs=209.0

Q ss_pred             cCCCCCcEEEEeCCC-ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGA-RGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas-~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..++++|++|||||+ +|||++++++|+++|++|++++|+.+..++..+++      ++.++.+|++|.++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            356899999999998 59999999999999999999999988777766554      46789999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++++++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.++++.++||++||..+..+.++...|+
T Consensus        97 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  175 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYA  175 (266)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHhCCCcEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHH
Confidence            9999999999999986 446788999999999999999999999999999999865578999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.|++.++.|++++||+||+|+||+++|++.....         .++......   ...|.+|+.+|+|+|+++
T Consensus       176 ~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~---~~~~~~r~~~~~dva~~i  243 (266)
T 3o38_A          176 AAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS---------SSELLDRLA---SDEAFGRAAEPWEVAATI  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------------CCTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC---------cHHHHHHHH---hcCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999876532         111112222   223678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +||+++...++||++|.+|||++
T Consensus       244 ~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          244 AFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHcCccccCccCCEEEEcCCcC
Confidence            99999999999999999999975

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-47  Score=323.08  Aligned_cols=240  Identities=26%  Similarity=0.409  Sum_probs=214.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+++.+.+     ++.++.+|++|.++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999988777665543     367889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           82 AIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            999999999987 446788999999999999999999999999999998765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.|+++++.|++++||++++|+||+++|++....          .++.......   ..|.+|+.+|||+|++++||+
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL----------TDEQKSFIAT---KIPSGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS----------CHHHHHHHHT---TSTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc----------cHHHHHHHhh---cCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999986532          2222222222   236789999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...++||++|.+|||+++
T Consensus       227 s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          227 SEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CCCcCCccCCEEEECCCEec
Confidence            99999999999999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-48  Score=328.03  Aligned_cols=242  Identities=26%  Similarity=0.381  Sum_probs=198.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+++..++..+++  ++.++.+|++|.++++++++++.+++|++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999999999999999999999887766665544  36788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCC---cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecCchhhcCCCCCch
Q 023708           91 DIMFNNAGISGSGGS---ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        91 d~li~nag~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      |+||||||+......   ..+.+.++|++.+++|+.++++++++++|.|.++     ++.|+||++||..+..+.++...
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  162 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAA  162 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcc
Confidence            999999998644222   2378899999999999999999999999999874     23689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVA  241 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edva  241 (278)
                      |++||+++++|+++++.|++++||+||+|+||+++|++.....           ++......  ...|. +|+++|+|+|
T Consensus       163 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----------~~~~~~~~--~~~p~~~r~~~~~dva  229 (257)
T 3tpc_A          163 YAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP-----------QDVQDALA--ASVPFPPRLGRAEEYA  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------------CCSSSSCSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC-----------HHHHHHHH--hcCCCCCCCCCHHHHH
Confidence            9999999999999999999999999999999999999875432           11111111  22355 8999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++++||+++  .++||++|.+|||+++.
T Consensus       230 ~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          230 ALVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHHHHccc--CCcCCcEEEECCCccCC
Confidence            999999975  79999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-47  Score=321.60  Aligned_cols=240  Identities=37%  Similarity=0.519  Sum_probs=212.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++++.++.+|++|.++++++++++.+.+|++|+|
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47889999999999999999999999999999999998888777666567889999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||.. ..+.++...|++||++++.|
T Consensus        82 vn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~  158 (245)
T 1uls_A           82 VHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNLGQANYAASMAGVVGL  158 (245)
T ss_dssp             EECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCCCchhHHHHHHHHHHH
Confidence            9999986 346788999999999999999999999999999998755 68999999999 88888899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.|++++||++|+|+||+++|++....          .++.......   ..|.+|+.+|+|+|++++||+++...
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~~~~~~~dvA~~v~~l~s~~~~  225 (245)
T 1uls_A          159 TRTLALELGRWGIRVNTLAPGFIETRMTAKV----------PEKVREKAIA---ATPLGRAGKPLEVAYAALFLLSDESS  225 (245)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTTSSS----------CHHHHHHHHH---TCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCcCcchhhc----------CHHHHHHHHh---hCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999975321          2222222222   23668999999999999999999899


Q ss_pred             CceeeEEeecCCcccC
Q 023708          254 FITAHNLVIDGGYTTG  269 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++.+|||++++
T Consensus       226 ~~tG~~~~vdgG~~~~  241 (245)
T 1uls_A          226 FITGQVLFVDGGRTIG  241 (245)
T ss_dssp             TCCSCEEEESTTTTTT
T ss_pred             CCcCCEEEECCCcccC
Confidence            9999999999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.1e-48  Score=336.16  Aligned_cols=244  Identities=26%  Similarity=0.323  Sum_probs=209.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhh---h--CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD--ELGAALAST---I--GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..+|++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.   .  ++.++.+|++|.++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999998862  333333322   2  36678899999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.+|++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|+
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCCCchHHH
Confidence            999999999999998765678899999999999999999999999999999854   57999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+||+|+||.++|++.....        ..++.....   ....|.+|+++|+|+|+++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--------~~~~~~~~~---~~~~p~~r~~~p~dvA~~v  269 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--------QTQDKIPQF---GQQTPMKRAGQPAELAPVY  269 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT--------SCGGGSTTT---TTTSTTSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC--------CCHHHHHHH---HhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999843211        011111111   1234779999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +||+++.+.++||++|.+|||++++
T Consensus       270 ~~L~s~~~~~itG~~i~vdGG~~l~  294 (294)
T 3r3s_A          270 VYLASQESSYVTAEVHGVCGGEHLG  294 (294)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHhCccccCCCCCEEEECCCccCc
Confidence            9999999999999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=7e-48  Score=330.32  Aligned_cols=247  Identities=35%  Similarity=0.455  Sum_probs=203.9

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc------------hHHHHHHHhhh-----CCeEEEec
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL------------DELGAALASTI-----GGRYIHCD   69 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~~-----~~~~~~~D   69 (278)
                      ++..+..+|++|++|||||++|||+++|++|+++|++|++++|+            .+..++..+.+     ++.++.+|
T Consensus         3 m~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   82 (278)
T 3sx2_A            3 MPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQAD   82 (278)
T ss_dssp             ------CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCC
Confidence            34444567899999999999999999999999999999999886            55554443322     36788999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEec
Q 023708           70 VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTS  149 (278)
Q Consensus        70 ~~~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vs  149 (278)
                      ++|+++++++++++.+.+|++|+||||||+....     .+.++|++.+++|+.++++++++++|.|.+++..|+||++|
T Consensus        83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           83 VRDRESLSAALQAGLDELGRLDIVVANAGIAPMS-----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCS-----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence            9999999999999999999999999999986332     15799999999999999999999999998865578999999


Q ss_pred             CchhhcCC----CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH--
Q 023708          150 SSAAIMGG----LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV--  223 (278)
Q Consensus       150 S~~~~~~~----~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (278)
                      |..+..+.    ++...|++||+++++|+++++.|++++||+||+|+||+++|++.......         .......  
T Consensus       158 S~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~  228 (278)
T 3sx2_A          158 SSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTR---------EWLAKMAAA  228 (278)
T ss_dssp             CGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH---------HHHHHHHHH
T ss_pred             cHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHH---------HHHhhccch
Confidence            99998876    66778999999999999999999999999999999999999987543210         0010000  


Q ss_pred             -----hhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          224 -----RDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       224 -----~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                           ......| +|+.+|+|+|++++||+++...++||++|.+|||+++
T Consensus       229 ~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          229 TDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             CC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             hhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence                 0112234 7899999999999999999999999999999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-47  Score=324.80  Aligned_cols=250  Identities=30%  Similarity=0.490  Sum_probs=213.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++       ++.++.+|++|.++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987766554332       366789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccHHH
Confidence            9999999999999864436788999999999999999999999999999998765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ||+++++|+++++.|++++||+||+|+||+++|++........  ... ..... .....   ..|.+|+++|+|+|+++
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~-~~~~~~~~~~~---~~p~~r~~~~~dvA~~v  241 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQL--DPE-NPRKAAEEFIQ---VNPSKRYGEAPEIAAVV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHH--CTT-CHHHHHHHHHT---TCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhcccccc--Chh-hhhhHHHHHhc---cCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999876531100  000 11111 12221   23678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +||+++...++||++|.+|||+++.
T Consensus       242 ~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          242 AFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHcCccccCCCCCEEEECCCcccC
Confidence            9999999999999999999998753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.1e-47  Score=326.04  Aligned_cols=239  Identities=17%  Similarity=0.191  Sum_probs=200.1

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++.+++++|++|||||++|||+++|++|+++|++|++++|+++...+..+..++.++.+|++|.++++++++++.+.+|+
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS   99 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            44567899999999999999999999999999999999998766655555567889999999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+.... + .+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||++
T Consensus       100 iD~lv~nAg~~~~~-~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  176 (260)
T 3gem_A          100 LRAVVHNASEWLAE-T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATKAG  176 (260)
T ss_dssp             CSEEEECCCCCCCC-C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHHHHHHH
T ss_pred             CCEEEECCCccCCC-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHHHHHHH
Confidence            99999999986443 2 5678899999999999999999999999998865 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +++|+++++.|+++ +|+||+|+||++.|++...            +........   ..|.+|+.+|+|+|++++||+ 
T Consensus       177 ~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~------------~~~~~~~~~---~~p~~r~~~~edva~~v~~L~-  239 (260)
T 3gem_A          177 LESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD------------AAYRANALA---KSALGIEPGAEVIYQSLRYLL-  239 (260)
T ss_dssp             HHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------------------CCSCCCCCTHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC------------HHHHHHHHh---cCCCCCCCCHHHHHHHHHHHh-
Confidence            99999999999998 7999999999999986431            111111111   236799999999999999999 


Q ss_pred             CCCCCceeeEEeecCCcccC
Q 023708          250 EEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~  269 (278)
                       ...++||++|.+|||+++.
T Consensus       240 -~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 -DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             -HCSSCCSCEEEESTTTTTC
T ss_pred             -hCCCCCCCEEEECCCcccC
Confidence             4679999999999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3e-47  Score=324.63  Aligned_cols=245  Identities=31%  Similarity=0.449  Sum_probs=212.8

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ...++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999987766654433      35678899999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch-hhcCCCCCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA-AIMGGLASHAY  163 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~Y  163 (278)
                      +.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||.. +..+.++...|
T Consensus        95 ~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y  172 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAY  172 (267)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCChhH
Confidence            99999999999999863 46788999999999999999999999999999998755 68999999999 88888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.|+++++.|++++||++|+|+||+++|++......        .++........   .|.+|+++|+|+|++
T Consensus       173 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~---~p~~~~~~p~dvA~~  241 (267)
T 1vl8_A          173 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--------DPEKLDYMLKR---IPLGRTGVPEDLKGV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--------CHHHHHHHHHT---CTTSSCBCGGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc--------ChHHHHHHHhh---CCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999999998764320        12222222222   366899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++...++||++|.+|||++.
T Consensus       242 v~~l~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          242 AVFLASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCccccCCcCCeEEECCCCCC
Confidence            9999999899999999999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-48  Score=329.01  Aligned_cols=239  Identities=32%  Similarity=0.442  Sum_probs=206.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++++ .+..+++.+++     ++.++.+|++|.++++++++++.
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998654 44444444332     36688999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-CCCCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-GLASHAY  163 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~Y  163 (278)
                      +.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+ .++...|
T Consensus       105 ~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          105 EALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCCSTTCHHH
T ss_pred             HHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCCCCCchHH
Confidence            9999999999999986 4468899999999999999999999999999999954   589999999877665 7889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+++++|+++++.|++++||+||+|+||+++|++....           ++.......   ..|.+|+.+|||+|++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-----------~~~~~~~~~---~~~~~r~~~pedvA~~  246 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-----------GDHAEAQRE---RIATGSYGEPQDIAGL  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS-----------CSSHHHHHH---TCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc-----------chhHHHHHh---cCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999985320           111122222   2367999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++||+++.+.++||++|.+|||++
T Consensus       247 v~fL~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          247 VAWLAGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhCcccCCccCCEEEeCcCcc
Confidence            999999999999999999999985

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=7e-48  Score=330.88  Aligned_cols=252  Identities=27%  Similarity=0.392  Sum_probs=208.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+..  ++.++.+|++|.++++++++++.+.+|++|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999999999999999999999999988888776654  367889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcc----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           92 IMFNNAGISGSGGSIT----SLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        92 ~li~nag~~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +||||||+.....++.    +.+.++|++.+++|+.++++++++++|.|.++  .|+||++||..+..+.++...|++||
T Consensus        82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  159 (281)
T 3zv4_A           82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATK  159 (281)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSSSSSCHHHHHHH
T ss_pred             EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhccCCCCCchhHHHH
Confidence            9999999864433433    44567899999999999999999999999874  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++++|+++++.|+++. |+||+|+||+++|++......... .......+.......  ..|.+|+++|+|+|++++||
T Consensus       160 aa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~p~~r~~~pedvA~~v~fL  235 (281)
T 3zv4_A          160 HAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLS-EQSISSVPLADMLKS--VLPIGRMPALEEYTGAYVFF  235 (281)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC---------CCHHHHHHH--TCTTSSCCCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccc-cccccchhHHHHHHh--cCCCCCCCCHHHHHHHHHHh
Confidence            99999999999999986 999999999999998642110000 000011111222222  23779999999999999999


Q ss_pred             cc-CCCCCceeeEEeecCCcccCcC
Q 023708          248 AS-EEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       248 ~s-~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      ++ +...|+||++|.+|||+++...
T Consensus       236 ~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          236 ATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             HSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             hcccccccccCcEEEECCCCccccc
Confidence            99 7888999999999999986543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.7e-47  Score=330.35  Aligned_cols=243  Identities=23%  Similarity=0.245  Sum_probs=206.3

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHHHH---HHhhh-CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAA---LASTI-GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+++..+.   +.+.. ++.++.+|++|.++++++++++.++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            46899999999999  559999999999999999999998643332   22222 3678899999999999999999999


Q ss_pred             cCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           87 KGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y  183 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVMPNYNVM  183 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBCTTTTHH
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCCCchHHH
Confidence            9999999999998642   467889999999999999999999999999999965   6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.....         ...+.......  ..|.+|+.+|+|+|++
T Consensus       184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~r~~~pedvA~~  252 (293)
T 3grk_A          184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG---------DFRYILKWNEY--NAPLRRTVTIDEVGDV  252 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C---------CHHHHHHHHHH--HSTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc---------chHHHHHHHHh--cCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999865421         11222222222  2367999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++...++||++|.+|||+++.
T Consensus       253 v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          253 GLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHcCccccCCcceEEEECCCcccC
Confidence            99999999999999999999999854

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.7e-48  Score=333.38  Aligned_cols=244  Identities=22%  Similarity=0.251  Sum_probs=209.9

Q ss_pred             cCCCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHHHH---HHhhh-CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAA---LASTI-GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++|++|++|||||++  |||+++|++|+++|++|++++|+++..+.   +.+.. .+.++.+|++|.++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3568899999999986  99999999999999999999998643333   22222 367889999999999999999999


Q ss_pred             hcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           86 WKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        86 ~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      ++|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~~~~~  181 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVPHYNV  181 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTTH
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCCCchh
Confidence            99999999999998643   257889999999999999999999999999999865   689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+||+|+||+++|++.....         ...........  ..|.+|+.+|||+|+
T Consensus       182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~r~~~pedvA~  250 (296)
T 3k31_A          182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS---------DFHYILTWNKY--NSPLRRNTTLDDVGG  250 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH---------HHHHHHHHHHH--HSTTSSCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc---------chHHHHHHHHh--cCCCCCCCCHHHHHH
Confidence            9999999999999999999999999999999999999764321         01111111111  236799999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++.+.++||++|.+|||+++.
T Consensus       251 ~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          251 AALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCCccCCccCCEEEECCCcccc
Confidence            999999999999999999999999865

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-47  Score=324.29  Aligned_cols=246  Identities=25%  Similarity=0.364  Sum_probs=208.7

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHH
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALAST-----IGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +.....+++|++|||||++|||+++|++|+++|++|++++ |+.+...+..+.     .++.++.+|++|.+++++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence            3445677899999999999999999999999999999887 443333332222     2477889999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...
T Consensus        85 ~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  162 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTN  162 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHH
T ss_pred             HHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCcc
Confidence            9999999999999999874 45788999999999999999999999999999998865 699999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||++++|+||+++|++....          .++.........   |.+|+.+|+|+|+
T Consensus       163 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~dva~  229 (256)
T 3ezl_A          163 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI----------RPDVLEKIVATI---PVRRLGSPDEIGS  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----------CHHHHHHHHHHS---TTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc----------CHHHHHHHHhcC---CCCCCcCHHHHHH
Confidence            999999999999999999999999999999999999987542          233333333332   6689999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||++++..++||++|.+|||++++
T Consensus       230 ~~~~l~s~~~~~~tG~~i~vdgG~~~~  256 (256)
T 3ezl_A          230 IVAWLASEESGFSTGADFSLNGGLHMG  256 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTSCC-
T ss_pred             HHHHHhCCcccCCcCcEEEECCCEeCc
Confidence            999999999999999999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.3e-46  Score=319.86  Aligned_cols=252  Identities=27%  Similarity=0.328  Sum_probs=214.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999987766554432      3667899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        83 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           83 FGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHHH
Confidence            999999999999863 46788899999999999999999999999999998755 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      |++++.++++++.|++++||++|+|+||.+.|++................++. .......  .|.+|+.+|+|+|++++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dvA~~~~  238 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--APIKRFASPEELANFFV  238 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--CTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--CCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999987654322111111112222 2222210  26689999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++...+++|+.|.+|||+++
T Consensus       239 ~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          239 FLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHcCccccCCCCcEEEECCCccc
Confidence            99998889999999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=5e-48  Score=329.22  Aligned_cols=243  Identities=28%  Similarity=0.407  Sum_probs=210.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+...      ....+.+|+++.++++++++++.+.+|++|
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   96 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------ADLHLPGDLREAAYADGLPGAVAAGLGRLD   96 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------CSEECCCCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------hhhccCcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            34688999999999999999999999999999999999765332      123457999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++||++++
T Consensus        97 ~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  174 (266)
T 3uxy_A           97 IVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAALA  174 (266)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHHHHHH
Confidence            9999999874 46888999999999999999999999999999998865 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .|+++++.|++++||+||+|+||.++|++.......    ....+++.......  ..|.+|+.+|||+|++++||+++.
T Consensus       175 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~--~~p~~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          175 SLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK----RGFDPDRAVAELGR--TVPLGRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH----TTCCHHHHHHHHHT--TSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc----ccccchHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999998765432    12233333222222  347799999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      +.++||++|.+|||+++
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          249 ARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             hcCCcCCEEEECcCEeC
Confidence            99999999999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-47  Score=322.32  Aligned_cols=250  Identities=32%  Similarity=0.478  Sum_probs=212.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999987776655443     36678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHHHH
Confidence            99999999999863456788999999999999999999999999999998765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhh---hccCCCC--HHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKY---LGKADMK--PEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ++++.|+++++.|++++||+||+|+||+++|++........   .......  ++........  ..|.+|+++|+|+|+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~p~dvA~  239 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG--SVPMRRYGDINEIPG  239 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH--TSTTSSCBCGGGSHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999876531110   0110011  2202221211  236799999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCC
Q 023708          243 AALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      +++||+++.+.++||++|.+|||
T Consensus       240 ~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          240 VVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHcCchhcCcCCcEEecCCC
Confidence            99999999999999999999998

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-47  Score=322.94  Aligned_cols=247  Identities=26%  Similarity=0.361  Sum_probs=208.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+++..++..+++     ++.++.+|++|+++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999987766654432     36778999999999999999999999


Q ss_pred             -CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           88 -GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        88 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       |++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        97 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           97 DGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             TSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhHHH
Confidence             8999999999986 445788999999999999999999999999999998755 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|+++++.|++++||+||+|+||+++|++........    ....+........   .|.+|+++|+|+|++++|
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~---~p~~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN----PHQKEEIDNFIVK---TPMGRAGKPQEVSALIAF  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------CHHHHHHHHHH---STTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc----cCcHHHHHHHHhc---CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999865432100    0011112222222   367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...++||++|.+|||+++
T Consensus       248 l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          248 LCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCcCCCEEEECCCccc
Confidence            9999999999999999999875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-46  Score=319.12  Aligned_cols=249  Identities=32%  Similarity=0.422  Sum_probs=211.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999987766654433     366789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           82 VIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            999999986 4467889999999999999999999999999999987543589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .|+++++.|++++||+||+|+||+++|++..............++++.......  ..|.+|+.+|+|+|++++||+++.
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK--RITLGRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT--TCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999987653211101000111122121211  236789999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..++||++|.+|||+++
T Consensus       239 ~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          239 SDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            99999999999999864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-47  Score=323.41  Aligned_cols=248  Identities=33%  Similarity=0.473  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++ ++.++.+|++|.++++++++++.+.+|++|
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999999988777766554 367889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||......++.+.+.++|++.+++|+.++++++++++|.|.++  .++||++||..+..+.++...|++||++++
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (270)
T 1yde_A           85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVT  162 (270)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCCCCcccHHHHHHHH
Confidence            999999987555678899999999999999999999999999999764  489999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .++++++.|++++||++|+|+||.++|++.......     ...+..  .........|.+|+++|+|+|++++||+++ 
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~-----~~~~~~--~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-  234 (270)
T 1yde_A          163 AMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL-----MPDPRA--SIREGMLAQPLGRMGQPAEVGAAAVFLASE-  234 (270)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT-----SSSHHH--HHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhc-----ccchHH--HHHHHhhcCCCCCCcCHHHHHHHHHHHccc-
Confidence            999999999999999999999999999987543210     001111  111111223779999999999999999997 


Q ss_pred             CCCceeeEEeecCCcccCc
Q 023708          252 AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~~  270 (278)
                      +.++||++|.+|||+++..
T Consensus       235 ~~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          235 ANFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             CTTCCSCEEEESTTTTSCC
T ss_pred             CCCcCCCEEEECCCeeccc
Confidence            7899999999999988653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.9e-47  Score=322.64  Aligned_cols=250  Identities=30%  Similarity=0.425  Sum_probs=204.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |++|++|||||++|||++++++|+++|++|++++|+.+. .+++.+++      ++.++.+|++|.++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999998766 55544332      35678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHHH
Confidence            99999999999863 46788999999999999999999999999999998755 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      ++++.|++.++.|++++||++|+|+||+++|++..............++++..... ..  ..|.+|+.+|+|+|++++|
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE--KQPSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH--HCTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc--cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999875432110000001111111111 11  1366899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...++||+++.+|||+++
T Consensus       238 l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          238 LASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhcCCCCCEEEECCCccC
Confidence            9999899999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.7e-48  Score=330.21  Aligned_cols=241  Identities=26%  Similarity=0.316  Sum_probs=200.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc---hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL---DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~---~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|.   .+..+++.+++     ++.++.+|++|.++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999998653   44555544433     2667899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      .+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|
T Consensus        86 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhccCCCCCchh
Confidence            999999999999999874 468889999999999999999999999999999943   5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....         .++......   ...|.+|+.+|||+|++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~---~~~~~~r~~~pedvA~~  229 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---------TKESTAFHK---SQAMGNQLTKIEDIAPI  229 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------------CCCCSCCGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------chHHHHHHH---hcCcccCCCCHHHHHHH
Confidence            999999999999999999999999999999999999865321         111111111   12367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++ ..++||++|.+|||++..
T Consensus       230 v~~L~s~-~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          230 IKFLTTD-GWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             HHHHHTT-TTTCCSCEEEESTTCCCC
T ss_pred             HHHHcCC-CCCccCCEEEECCCccCC
Confidence            9999998 899999999999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.2e-46  Score=319.73  Aligned_cols=244  Identities=23%  Similarity=0.339  Sum_probs=212.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999987766654433     35678999999999999999999999


Q ss_pred             -CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           88 -GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        88 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       +++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        85 ~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           85 HGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHHH
Confidence             8999999999986 446788999999999999999999999999999998755 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH---HHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC---KMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |++++.++++++.|++++||++|+|+||.++|++......        .+....   ....   ..|.+|+.+|+|+|++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~dvA~~  231 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ--------DPEQKENLNKLID---RCALRRMGEPKELAAM  231 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT--------SHHHHHHHHHHHH---TSTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhcc--------ChhhHHHHHHHHh---cCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999998754321        111111   2222   2367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++...++||+++.+|||+++.
T Consensus       232 v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          232 VAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHcCccccCCCCCEEEECCCcccc
Confidence            99999998999999999999998753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.1e-46  Score=319.86  Aligned_cols=245  Identities=31%  Similarity=0.401  Sum_probs=212.8

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     ++.++.+|++|.++++++++++.+.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999987766554432     3567889999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..++.+.++...|++|
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  167 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVS  167 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHHHH
Confidence            999999999999864456788999999999999999999999999999998755 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|++.++.|++++||++|+|+||+++|++....+.        .++........   .|.+|+++|+|+|++++|
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~dva~~v~~  236 (260)
T 2zat_A          168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM--------DKARKEYMKES---LRIRRLGNPEDCAGIVSF  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS--------SHHHHHHHHHH---HTCSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc--------ChHHHHHHHhc---CCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999998754321        11111112121   256889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++++.+++|+++.+|||+..
T Consensus       237 l~s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          237 LCSEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTCCC
T ss_pred             HcCcccCCccCCEEEECCCccc
Confidence            9999999999999999999865

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.5e-46  Score=318.67  Aligned_cols=248  Identities=33%  Similarity=0.430  Sum_probs=210.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  .+++.+++     ++.++.+|++|.++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998766  55544332     3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++...|++||++
T Consensus        82 iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           82 FDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            99999999986 34678899999999999999999999999999999876523899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC-HHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK-PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++.|+++++.|++++||+||+|+||+++|++............... .+.......   ..|.+|+.+|+|+|++++||+
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~r~~~p~dvA~~v~~l~  237 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSS---SIALGRPSVPEDVAGLVSFLA  237 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHT---TCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHh---cCCCCCccCHHHHHHHHHHHh
Confidence            9999999999999999999999999999998765331110000000 111222222   236789999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...++||++|.+|||+++
T Consensus       238 s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          238 SENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SGGGTTCCSCEEEESSSSCC
T ss_pred             CcccCCCCCCEEEECCCEec
Confidence            99999999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=8.9e-47  Score=318.54  Aligned_cols=242  Identities=35%  Similarity=0.424  Sum_probs=203.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+. +..++..+..  ++.++.+|++|.++++++++++.+.+|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999987 6555432322  3667899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||++
T Consensus        83 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (249)
T 2ew8_A           83 CDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAA  160 (249)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHHHHH
Confidence            99999999986 346788999999999999999999999999999998765 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH-HHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLV-NAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++.|+++++.|++++||++|+|+||+++|++.. .....       .++ .   ..... .|.+|+.+|+|+|++++||+
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~-~---~~~~~-~~~~~~~~p~dva~~~~~l~  228 (249)
T 2ew8_A          161 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-------MFD-V---LPNML-QAIPRLQVPLDLTGAAAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------------CTT-SSSCSCCCTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-------hhh-H---HHHhh-CccCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999865 21100       001 0   11111 36789999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++...++||+++.+|||++.
T Consensus       229 s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          229 SDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             SGGGTTCCSCEEEESSSCCC
T ss_pred             CcccCCCCCcEEEECCCccC
Confidence            99899999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=6.1e-47  Score=318.96  Aligned_cols=238  Identities=29%  Similarity=0.487  Sum_probs=208.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |++|++|||||++|||++++++|+++|++|++++| +++..+++.+++     ++.++.+|++|.++++++++++.+.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999998 766665554432     366789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           82 QVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             CCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            999999999986 446788999999999999999999999999999998755 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.|+++++.|++++||++|+|+||+++|++....          .+........   ..|.+|+.+|+|+|++++||+
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~p~~~~~~~~dvA~~~~~l~  226 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL----------DENIKAEMLK---LIPAAQFGEAQDIANAVTFFA  226 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC----------CTTHHHHHHH---TCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999975321          1111122222   236689999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++...++||+++.+|||++
T Consensus       227 s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          227 SDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhcCCCCCEEEECcCcc
Confidence            9989999999999999975

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.2e-46  Score=322.36  Aligned_cols=244  Identities=28%  Similarity=0.365  Sum_probs=211.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++    ++.++.+|++|.++++++++++.+.+|
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4688999999999999999999999999999999999987777665544    356788999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC---CcEEEEecCchhhcCCCCCc-hhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR---KGSIICTSSSAAIMGGLASH-AYS  164 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~-~Y~  164 (278)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|++++.   .++||++||..+..+.++.. .|+
T Consensus       105 ~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~  183 (276)
T 2b4q_A          105 RLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYG  183 (276)
T ss_dssp             CCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccH
Confidence            9999999999863 357888999999999999999999999999999987542   28999999999998888888 999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.|++.++.|++++||+||+|+||+++|++.......          ....... ....|.+|+.+|+|+|+++
T Consensus       184 asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~-~~~~p~~r~~~p~dvA~~v  252 (276)
T 2b4q_A          184 PSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----------PQALEAD-SASIPMGRWGRPEEMAALA  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----------HHHHHHH-HHTSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----------HHHHHHh-hcCCCCCCcCCHHHHHHHH
Confidence            9999999999999999999999999999999999987653210          0111111 0023678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...++||++|.+|||+++
T Consensus       253 ~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          253 ISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHhCccccCCCCCEEEeCCCccC
Confidence            999999899999999999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7e-47  Score=323.01  Aligned_cols=242  Identities=29%  Similarity=0.408  Sum_probs=207.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+ ++..+.+.+.+     ++.++.+|++|.++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999994 44444443322     367889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus       104 ~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  181 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTNYSA  181 (271)
T ss_dssp             HHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchHhHH
Confidence            9999999999999874 46788999999999999999999999999999998865 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||++++.|++.++.|++++||+|++|+||.++|++.....          +......   ....|.+|+.+|+|+|++++
T Consensus       182 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----------~~~~~~~---~~~~~~~~~~~p~dvA~~i~  248 (271)
T 4iin_A          182 SKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK----------DELKADY---VKNIPLNRLGSAKEVAEAVA  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------C---GGGCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc----------HHHHHHH---HhcCCcCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999876432          1111111   12236789999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+++...++||++|.+|||+++
T Consensus       249 ~l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          249 FLLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHhCCCcCCCcCCEEEeCCCeeC
Confidence            99999999999999999999864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.5e-46  Score=316.05  Aligned_cols=253  Identities=32%  Similarity=0.456  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+  ++.++.+|++|.++++++++++.+++|++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999999988777766554  46788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|++||+++
T Consensus        88 D~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  166 (263)
T 3ak4_A           88 DLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAV  166 (263)
T ss_dssp             CEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHH
Confidence            9999999986 345788999999999999999999999999999998754358999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.|+++++.|++++||+++.|+||.++|++...............+++.......  ..|.+|+.+|+|+|++++||+++
T Consensus       167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~dvA~~v~~l~s~  244 (263)
T 3ak4_A          167 FGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS--LTPLGRIEEPEDVADVVVFLASD  244 (263)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH--TCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999987643210000001111222222221  23668999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ...+++|++|.+|||+++
T Consensus       245 ~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          245 AARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GGTTCCSCEEEESSSSSC
T ss_pred             cccCCCCCEEEECcCEeC
Confidence            889999999999999864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.2e-46  Score=319.92  Aligned_cols=250  Identities=26%  Similarity=0.390  Sum_probs=212.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.+.+|
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999987766554433     366789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.  |.+++ .++||++||..+..+.++...|++|
T Consensus        99 ~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 2rhc_B           99 PVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSAS  176 (277)
T ss_dssp             SCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccHHHH
Confidence            999999999986 3467889999999999999999999999999999  87754 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|+++++.|++++||++|+|+||+++|++................++.......  ..|.+|+++|+|+|++++|
T Consensus       177 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~~~dvA~~v~~  254 (277)
T 2rhc_B          177 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA--RVPIGRYVQPSEVAEMVAY  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH--HSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh--cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999987654311100000111121111111  1266899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcc
Q 023708          247 LASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      |++++..+++|++|.+|||++
T Consensus       255 l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          255 LIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCchhcCCCCcEEEECCCcc
Confidence            999989999999999999975

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6e-47  Score=321.51  Aligned_cols=250  Identities=26%  Similarity=0.346  Sum_probs=208.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++       ++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987766654432       467889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+| +|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++
T Consensus        83 ~~g-id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LGG-ADILVYSTGGP-RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TTC-CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hcC-CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhHH
Confidence            999 99999999976 446788999999999999999999999999999998765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ||++++.+++.++.|++++||++|+|+||++.|++...............++. ....   ....|.+|+++|+|+|+++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM---ASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH---HhcCCCCCccCHHHHHHHH
Confidence            99999999999999999999999999999999998652211000000001111 1111   1123678999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...++||++|.+|||+++
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHhCccccCCCCCEEEeCCCccC
Confidence            999999999999999999999763

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-47  Score=328.18  Aligned_cols=251  Identities=26%  Similarity=0.348  Sum_probs=205.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc------------hHHHHHHHhhh-----CCeEEEecCCCHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL------------DELGAALASTI-----GGRYIHCDVTKEE   74 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~~-----~~~~~~~D~~~~~   74 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+            .+..++....+     ++.++.+|++|.+
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            346899999999999999999999999999999999886            54444443322     3678899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           75 DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        75 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      +++++++++.+.+|++|+||||||+....   .+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~  158 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG---AHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITTGSVAGL  158 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC---TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc---CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEeccchhc
Confidence            99999999999999999999999986432   34788999999999999999999999999832   6899999999988


Q ss_pred             cCC-----------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHh-hhcc--CCCCHHHHH
Q 023708          155 MGG-----------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK-YLGK--ADMKPEEVC  220 (278)
Q Consensus       155 ~~~-----------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~--~~~~~~~~~  220 (278)
                      .+.           ++...|++||+++++|+++++.|++++||+||+|+||+++|++....... ....  ......+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          159 IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             HHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             ccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHH
Confidence            765           56678999999999999999999999999999999999999987542211 1111  011111222


Q ss_pred             HHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       221 ~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      .........| +|+++|+|+|++++||+++.+.|+||++|.+|||+++.
T Consensus       239 ~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          239 LAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            2222333345 89999999999999999999999999999999999763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.3e-46  Score=320.95  Aligned_cols=240  Identities=25%  Similarity=0.389  Sum_probs=207.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||++|||++++++|+++|++|++++ |..+...+..+.     .++.++.+|++|.++++++++++.+.+|
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999999988 555544443332     2377899999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus       103 ~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          103 KVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             CCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHHH
Confidence            999999999987 446788999999999999999999999999999998765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|++.++.|++++||+|++|+||+++|++......          +....  ......|.+|+.+|+|+|++++||+
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~--~~~~~~~~~~~~~p~dvA~~v~~L~  248 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ----------DVLEA--KILPQIPVGRLGRPDEVAALIAFLC  248 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------------C--CSGGGCTTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch----------hHHHH--HhhhcCCcCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999998754321          11110  1122346789999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++..++||++|++|||+++
T Consensus       249 s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          249 SDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             STTCTTCCSCEEEESTTSCC
T ss_pred             CCCcCCeeCcEEEECCCEeC
Confidence            99999999999999999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.1e-46  Score=323.28  Aligned_cols=239  Identities=24%  Similarity=0.238  Sum_probs=206.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhh------CCeEEEecCCCHH------------
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTI------GGRYIHCDVTKEE------------   74 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~------~~~~~~~D~~~~~------------   74 (278)
                      +|++|++|||||++|||++++++|+++|++|++++ |+.+..+++.+++      ++.++.+|+++.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            57899999999999999999999999999999999 9887766655433      3678899999999            


Q ss_pred             -----HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCC--------------HHHHHHHHHHHhHHHHHHHHHHHHH
Q 023708           75 -----DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN--------------MEDVKFLLSVNLNGILHGIKHAAKA  135 (278)
Q Consensus        75 -----~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~~  135 (278)
                           +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++.+++|+.++++++++++|.
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                 999999999999999999999999864 35777888              8999999999999999999999999


Q ss_pred             HHccCC-----CcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc
Q 023708          136 MIEGQR-----KGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG  210 (278)
Q Consensus       136 ~~~~~~-----~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~  210 (278)
                      |.+++.     .++||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ .  .     
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~-----  236 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M-----  236 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S-----
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C-----
Confidence            987541     48999999999999999999999999999999999999999999999999999999998 3  2     


Q ss_pred             cCCCCHHHHHHHHhhcCCCCCC-CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          211 KADMKPEEVCKMVRDSGSLLRG-RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          .++.......   ..|.+ |+.+|+|+|++++||+++...++||++|.+|||+++
T Consensus       237 ----~~~~~~~~~~---~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          237 ----PPAVWEGHRS---KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             ----CHHHHHHHHT---TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----CHHHHHHHHh---hCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence                1222222222   23667 899999999999999999999999999999999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.9e-46  Score=315.51  Aligned_cols=241  Identities=37%  Similarity=0.535  Sum_probs=212.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+++..+++.+++  ++.++.+|++|.++++++++++.+.+|++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999999988777766543  356789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (254)
T 1hdc_A           82 GLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVR  159 (254)
T ss_dssp             EEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHHHHHH
Confidence            999999986 345788999999999999999999999999999998765 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHhccC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA-SIEDVAQAALFLASE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edva~~~~~l~s~  250 (278)
                      .|+++++.|++++||++|+|+||+++|++.....     .. ..    ..   .....|.+|+. +|+|+|++++||+++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~-~~----~~---~~~~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          160 GLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG-----IR-QG----EG---NYPNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT-----CC-CS----TT---SCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhhhcCeEEEEEecccCcCccccccc-----hh-HH----HH---HHhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999865421     00 00    00   01123568888 999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...+++|+.+.+|||++..
T Consensus       227 ~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             GGTTCCSCEEEESTTTTTS
T ss_pred             hhcCCCCCEEEECCCcccc
Confidence            8899999999999998864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7e-46  Score=314.29  Aligned_cols=246  Identities=33%  Similarity=0.460  Sum_probs=210.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+++. +++.++++..++.+|++|.++++++++++.+.+|++|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999998766 555444422688999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||++++.|
T Consensus        82 v~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  159 (256)
T 2d1y_A           82 VNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNL  159 (256)
T ss_dssp             EECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHHHHHHHH
Confidence            9999986 445788899999999999999999999999999998755 68999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.|++++||++|+|+||.++|++..........    .++......   ...|.+|+.+|+|+|++++||+++...
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~dvA~~~~~l~s~~~~  232 (256)
T 2d1y_A          160 TRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPD----PERTRRDWE---DLHALRRLGKPEEVAEAVLFLASEKAS  232 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------CHHHH---TTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccC----CHHHHHHHH---hcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999987653210000    011111111   123668999999999999999999889


Q ss_pred             CceeeEEeecCCcccC
Q 023708          254 FITAHNLVIDGGYTTG  269 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~  269 (278)
                      +++|+.+.+|||+++.
T Consensus       233 ~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          233 FITGAILPVDGGMTAS  248 (256)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-47  Score=326.22  Aligned_cols=246  Identities=24%  Similarity=0.271  Sum_probs=214.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA---HIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .+|++|++|||||++|||+++|++|+++|+   +|++++|+.+..+++.+++       ++.++.+|++|.+++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999998   9999999988877765543       256789999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~  187 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSI  187 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCCch
Confidence            9999999999999999875567889999999999999999999999999999998765 789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+||+|+||+++|++......       ..++........      ....+|||+|+
T Consensus       188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~------~~p~~pedvA~  254 (287)
T 3rku_A          188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYR-------GNEEQAKNVYKD------TTPLMADDVAD  254 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTT-------TCHHHHHHHHTT------SCCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccccc-------CcHHHHHHhhcc------cCCCCHHHHHH
Confidence            99999999999999999999999999999999999998654321       122222222222      22348999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccCcCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      +++||+++...+++|+++.+|||.......
T Consensus       255 ~v~~l~s~~~~~i~g~~i~v~~g~~~p~~~  284 (287)
T 3rku_A          255 LIVYATSRKQNTVIADTLIFPTNQASPHHI  284 (287)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEETTEEETTEE
T ss_pred             HHHHHhCCCCCeEecceEEeeCCCCCCccc
Confidence            999999999999999999999999875544

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.1e-46  Score=319.15  Aligned_cols=243  Identities=30%  Similarity=0.407  Sum_probs=208.6

Q ss_pred             cccCCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecch-----HHHHHHHhhh--CCeEEEecCCCHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILD-----ELGAALASTI--GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~-----~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~   80 (278)
                      ++..++++|++|||||+  +|||+++|++|+++|++|++++|+.     +..+++.+..  ++.++.+|++|.+++++++
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence            34468999999999999  9999999999999999999998763     2233333332  3667889999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--C
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--L  158 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~  158 (278)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.  +
T Consensus        93 ~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  170 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQ  170 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSS
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCC
Confidence            999999999999999999874 45688999999999999999999999999999998865 6899999999998775  5


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (278)
                      +...|++||++++.|++.++.|+++. |+||+|+||+++|++....          +++.......   ..|.+|+.+|+
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~~~~r~~~~~  236 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV----------PKETQQLWHS---MIPMGRDGLAK  236 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS----------CHHHHHHHHT---TSTTSSCEETH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC----------CHHHHHHHHh---cCCCCCCcCHH
Confidence            77899999999999999999999887 9999999999999986531          2222222222   23779999999


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|++++||+++...++||++|.+|||+++
T Consensus       237 dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          237 ELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHHhHhheeecCccccccCCEEEECCceec
Confidence            999999999999999999999999999974

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=3.3e-46  Score=317.90  Aligned_cols=248  Identities=22%  Similarity=0.259  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHHHH---HHhhh---CCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAA---LASTI---GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~~~---~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+++..+.   +.+..   ++.++.+|++|.++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46889999999999  669999999999999999999987643333   33322   47789999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           85 SWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      +.+|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++..
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTH
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCCCcc
Confidence            999999999999998642   457788999999999999999999999999999864   58999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HHHHHhhcCCCCCCCCCCHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      .|++||+++++|+++++.|++++||+|++|+||+++|++.....         ...+ .......   .|.+|+.+|+|+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~p~dv  227 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS---------DFNSILKDIEER---APLRRTTTPEEV  227 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT---------THHHHHHHHHHH---STTSSCCCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc---------chHHHHHHHHhc---CCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999865321         1122 2222222   266899999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccCcCcccc
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      |++++||++++..++||++|.+|||++...+..+.
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~~~  262 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFHITARLEHH  262 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC--
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeEEeeecCCC
Confidence            99999999999999999999999999987765543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.4e-47  Score=322.51  Aligned_cols=241  Identities=29%  Similarity=0.404  Sum_probs=193.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++++|++|||||++|||++++++|+++|++|++++|..+...+.. ..++.++.+|++|.++++++++.+.+ +|++|
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id   81 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAET-MGTLR   81 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEE
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHH-hCCCC
Confidence            35789999999999999999999999999999999998654433221 12467889999999999999998877 89999


Q ss_pred             EEEECCccCCCCC---CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-------CCCcEEEEecCchhhcCCCCCc
Q 023708           92 IMFNNAGISGSGG---SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-------QRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        92 ~li~nag~~~~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      +||||||+.....   +..+.+.++|++.+++|+.++++++++++|.|.+.       +..|+||++||..+..+.++..
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA  161 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHH
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCc
Confidence            9999999753211   12358899999999999999999999999999872       3368999999999999988889


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDV  240 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edv  240 (278)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++....          .++........   .|. +|+.+|||+
T Consensus       162 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~~---~~~~~r~~~p~dv  228 (257)
T 3tl3_A          162 AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL----------PEEARASLGKQ---VPHPSRLGNPDEY  228 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-------------CHHHHHHHHHT---SSSSCSCBCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc----------cHHHHHHHHhc---CCCCCCccCHHHH
Confidence            9999999999999999999999999999999999999987542          22222222222   255 899999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |++++||+++  .++||++|.+|||+++.
T Consensus       229 a~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          229 GALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            9999999975  79999999999999864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.6e-45  Score=313.53  Aligned_cols=250  Identities=31%  Similarity=0.425  Sum_probs=214.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+.+.      ..++.++.+|++|.++++++++++.+.+|++|
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   76 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSIS   76 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            456889999999999999999999999999999999997643      23467899999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        77 ~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  154 (264)
T 2dtx_A           77 VLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVI  154 (264)
T ss_dssp             EEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHHHHHHH
Confidence            999999986 346788999999999999999999999999999998755 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCH----HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKP----EEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      .|++.++.|+++. |++|+|+||+++|++..........   ..+    +........   .|.+|+++|+|+|++++||
T Consensus       155 ~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~p~~~~~~p~dvA~~v~~l  227 (264)
T 2dtx_A          155 GLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVG---SDPMRIEKKISEWGHE---HPMQRIGKPQEVASAVAFL  227 (264)
T ss_dssp             HHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHC---SCHHHHHHHHHHHHHH---STTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccc---cCchhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHH
Confidence            9999999999988 9999999999999987653211100   011    111222221   3668999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcCccccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTSSMSFI  276 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~~~~~~  276 (278)
                      ++++..+++|+.|.+|||+++..|.-++.
T Consensus       228 ~s~~~~~~tG~~i~vdGG~~~~~p~~~~~  256 (264)
T 2dtx_A          228 ASREASFITGTCLYVDGGLSIRAPISTPE  256 (264)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCCCCCCCC
T ss_pred             hCchhcCCCCcEEEECCCcccCCCCCCcc
Confidence            99989999999999999999888876654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.9e-45  Score=315.99  Aligned_cols=251  Identities=27%  Similarity=0.398  Sum_probs=208.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+. .+++.+.+     ++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999987543 33332221     367789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC-Cchhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA-SHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~  164 (278)
                      .+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.  + .++||++||..+..+.+. ...|+
T Consensus       104 ~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~~Y~  179 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQAKAVPKHAVYS  179 (283)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTCSSCSSCHHHH
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhccCCCCCCcchH
Confidence            999999999999986 346788999999999999999999999999999992  2 689999999999887764 88999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccC-CCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA-DMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +||++++.|+++++.|++++||+||+|+||.++|++.......+.... ...++........ ...|.+|+++|+|+|++
T Consensus       180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~dvA~~  258 (283)
T 1g0o_A          180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV-QWSPLRRVGLPIDIARV  258 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH-HSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhh-cCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999998765432211110 1122322222220 02367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++||+++...++||++|.+|||++
T Consensus       259 v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          259 VCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCccccCcCCCEEEeCCCcc
Confidence            999999999999999999999975

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.6e-46  Score=314.99  Aligned_cols=245  Identities=29%  Similarity=0.368  Sum_probs=195.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.     +..++.++.+|++|.++++++++++.+.+|++|+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999999999999999999999999999999997642     1223678899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++||++++.
T Consensus        78 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  155 (250)
T 2fwm_X           78 LVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAALKS  155 (250)
T ss_dssp             EEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHHHHHH
Confidence            999999863 45788899999999999999999999999999998765 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHH-HHHHHH-hhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE-EVCKMV-RDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      |+++++.|++++||++|+|+||+++|++.......   . . ... ...... ......|.+|+.+|+|+|++++||+++
T Consensus       156 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  230 (250)
T 2fwm_X          156 LALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS---D-D-AEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASD  230 (250)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCC-----------------------------------------CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhCccCCEEEEEECCcccCccccccccC---h-h-HHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999986542100   0 0 000 000000 000023668899999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...++||++|.+|||++++
T Consensus       231 ~~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          231 LASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             GGTTCCSCEEEESTTTTTT
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            8999999999999998754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9e-46  Score=317.58  Aligned_cols=250  Identities=28%  Similarity=0.351  Sum_probs=210.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++        ++.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987776655433        456789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCC----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-CCC
Q 023708           86 WKGQLDIMFNNAGISGSGGS----ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-LAS  160 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~  160 (278)
                      .+|++|+||||||+... .+    +.+.+.++|++.+++|+.+++.++++++|.|.+++  ++||++||..+..+. ++.
T Consensus        83 ~~g~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSS
T ss_pred             hcCCCCEEEECCCCCCC-CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCCCCcc
Confidence            99999999999998633 44    78899999999999999999999999999998643  899999999998887 888


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++......  ......+..+...  ......|.+|+.+|+|+
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~--~~~~~~p~~~~~~pedv  235 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGM--PDQASQKFYNFMA--SHKECIPIGAAGKPEHI  235 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTC--CHHHHHHHHHHHH--HCTTTCTTSSCBCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccccc--ccccccchHHHHH--HHHcCCCCCCCCCHHHH
Confidence            9999999999999999999999999999999999999998654210  0000000011111  11122467899999999


Q ss_pred             HHHHHHhccCC-CCCceeeEEeecCCcccCc
Q 023708          241 AQAALFLASEE-AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       241 a~~~~~l~s~~-~~~~tG~~i~~dgG~~~~~  270 (278)
                      |++++||+++. ..++||++|.+|||+++..
T Consensus       236 A~~v~~l~s~~~~~~~tG~~i~vdgG~~~~~  266 (280)
T 1xkq_A          236 ANIILFLADRNLSFYILGQSIVADGGTSLVM  266 (280)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHHhcCcccccCccCCeEEECCCccccc
Confidence            99999999988 8899999999999998653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-46  Score=317.68  Aligned_cols=241  Identities=34%  Similarity=0.457  Sum_probs=177.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     .+.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999988877766543     2568899999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           87 KGQLDIMFNNAGISG--SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        87 ~g~id~li~nag~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++++|+||||||+..  ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..++   ++...|+
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---CCCchhH
Confidence            999999999999842  334677899999999999999999999999999998866 7899999999886   4556799


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+++.|+||+++|++.....         +.+.......   ..|.+|+.+|+|+|+++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---------PKEMVDDIVK---GLPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------------CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC---------cHHHHHHHhc---cCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999865432         1111112222   23668899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+++...++||++|++|||+.+
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC------
T ss_pred             HHHcCccccCCCCCEEEECCCeec
Confidence            999999999999999999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-46  Score=317.73  Aligned_cols=244  Identities=21%  Similarity=0.208  Sum_probs=207.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +|++|||||++|||+++|++|+++|  +.|++++|+++..+++.++.  ++.++.+|++|.++++++++++.+.+|++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            6999999999999999999999985  78999999988888776654  3678899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||+.....++.+.+.++|++.+++|+.++++++++++|.|++++  |+||++||..+..+.++...|++||+++++
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            999999876667889999999999999999999999999999998753  899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      |+++++.|+  +||+||+|+||+++|++....... .......++.........   |.+|+.+|+|+|++++||+++..
T Consensus       160 ~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          160 FAMTLANEE--RQVKAIAVAPGIVDTDMQVNIREN-VGPSSMSAEQLKMFRGLK---ENNQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             HHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCC-CCTTTSCHHHHHHHHHHH---TTC----CHHHHHHHHHHHHHCC
T ss_pred             HHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcc-cCccccCHHHHHHHHHHH---hcCCcCCcccHHHHHHHHHhhcc
Confidence            999999998  589999999999999987542110 000112334444333332   67999999999999999999984


Q ss_pred             -CCceeeEEeecCCccc
Q 023708          253 -GFITAHNLVIDGGYTT  268 (278)
Q Consensus       253 -~~~tG~~i~~dgG~~~  268 (278)
                       .++||++|.+|||...
T Consensus       234 ~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          234 PDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CGGGTTCEEETTCGGGG
T ss_pred             cCCCCccEEEecCcccc
Confidence             9999999999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-46  Score=320.39  Aligned_cols=249  Identities=26%  Similarity=0.356  Sum_probs=210.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++        ++.++.+|++|.++++++++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987776654433        456889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-CCCch
Q 023708           86 WKGQLDIMFNNAGISGSGGS--ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-LASHA  162 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~  162 (278)
                      .+|++|+||||||+... .+  +.+.+.++|++.+++|+.+++.++++++|.|.+++  |+||++||..+..+. ++...
T Consensus       103 ~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~~~~~~~  179 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLA-DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPY  179 (297)
T ss_dssp             HHSCCCEEEECCCCCCC-CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSCCTTSHH
T ss_pred             hcCCCCEEEECCCcCcC-CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCCCCCcch
Confidence            99999999999997633 45  78999999999999999999999999999998743  899999999998888 88999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||++++.|++.++.|++++||+||+|+||+++|++......  ......+..+...  ......|.+|+.+|+|+|+
T Consensus       180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~--~~~~~~p~~r~~~pedvA~  255 (297)
T 1xhl_A          180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL--PETASDKLYSFIG--SRKECIPVGHCGKPEEIAN  255 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC--CHHHHHHHHHHHH--HCTTTCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc--ccccccchHHHHH--HHHhcCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999998654210  0000000011111  1112246789999999999


Q ss_pred             HHHHhccCC-CCCceeeEEeecCCcccC
Q 023708          243 AALFLASEE-AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~-~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++. ..++||+.|.+|||+++.
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhCCcccCCccCcEEEECCCcccc
Confidence            999999988 899999999999998764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-46  Score=316.47  Aligned_cols=243  Identities=32%  Similarity=0.456  Sum_probs=211.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++  ++.++.+|++|.++++++++++.+.+|++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999999988777766554  366788999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++  ++||++||..+..+.++...|++||++++
T Consensus        83 ~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  159 (253)
T 1hxh_A           83 VLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHHHHHH
Confidence            999999986 446788999999999999999999999999999997643  89999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCC--CcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH-HHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          172 GLARSTACELGKH--GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK-MVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       172 ~l~~~l~~e~~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      .|+++++.|++++  ||++|+|+||.+.|++.....         +++.... ........|.+|+.+|+|+|++++||+
T Consensus       160 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  230 (253)
T 1hxh_A          160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL---------PKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA  230 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS---------CTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc---------chhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHc
Confidence            9999999999888  999999999999999865421         0110111 111000236689999999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++..+++|++|.+|||++.
T Consensus       231 s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          231 SDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             SGGGTTCCSCEEEESSSCTT
T ss_pred             CccccCCCCcEEEECCCccc
Confidence            99999999999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-46  Score=315.61  Aligned_cols=245  Identities=23%  Similarity=0.323  Sum_probs=202.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+. .+.+.+..     ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35668999999999999999999999999999998776433 33333321     3678999999999999999999999


Q ss_pred             cCCccEEEECCccC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc-hh-hcCCCCCchh
Q 023708           87 KGQLDIMFNNAGIS-GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS-AA-IMGGLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~-~~-~~~~~~~~~Y  163 (278)
                      ++++|+||||||.. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||. .. ..+.++...|
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCchh
Confidence            99999999999942 2446788999999999999999999999999999998865 6899999998 44 4567778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.|+++++.|++++||+|++|+||.+.|++.....           ++.....  ....|.+|+.+|+|+|++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~~~~~--~~~~p~~r~~~~~dva~~  228 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI-----------QEARQLK--EHNTPIGRSGTGEDIART  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH-----------HHHHHC----------CCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc-----------HHHHHHH--hhcCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999875432           1111111  112367899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      ++||+++...++||++|.+|||++...+
T Consensus       229 v~~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          229 ISFLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             HHHHcCcccCCCCCcEEEEcCceeeccC
Confidence            9999999999999999999999997654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-46  Score=318.90  Aligned_cols=253  Identities=21%  Similarity=0.237  Sum_probs=207.4

Q ss_pred             CccccCCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhh-CCeEEEecCCCHHHHHHHHH
Q 023708            8 NKLSSKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDE---LGAALASTI-GGRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus         8 ~~~~~~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~   81 (278)
                      ++....++++|++|||||+  +|||+++|++|+++|++|++++|++.   ..+++.+.. .+.++.+|++|.++++++++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence            3344568899999999998  99999999999999999999988743   333333332 37789999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCCC---CCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC
Q 023708           82 LAVSWKGQLDIMFNNAGISGSG---GSITS-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG  157 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~---~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  157 (278)
                      ++.+++|++|+||||||+....   .++.+ .+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~  161 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAI  161 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBC
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCC
Confidence            9999999999999999986431   34455 999999999999999999999999999865   5799999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCH
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI  237 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
                      ++...|++||+++++|+++++.|++++||+|++|+||+++|++......        .++........   .|.+|+.+|
T Consensus       162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~p  230 (271)
T 3ek2_A          162 PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS--------FGKILDFVESN---SPLKRNVTI  230 (271)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH--------HHHHHHHHHHH---STTSSCCCH
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc--------hHHHHHHHHhc---CCcCCCCCH
Confidence            9999999999999999999999999999999999999999998653210        01112222222   266899999


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCcccCcCccc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMS  274 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~~  274 (278)
                      ||+|++++||+++...++||++|.+|||+++..+.+.
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            9999999999999999999999999999998766553

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.2e-45  Score=311.05  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=207.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.  .+++.+. .++.++.+|++|.++++++++++.+.+|++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999987641  1222211 135678899999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+++
T Consensus        81 d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (255)
T 2q2v_A           81 DILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGV  158 (255)
T ss_dssp             SEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence            9999999986 446788899999999999999999999999999998755 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.|++.++.|++++||++|+|+||++.|++........... ............ ....|.+|+++|+|+|++++||+++
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~p~~~~~~~~dvA~~~~~l~s~  236 (255)
T 2q2v_A          159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAAN-GGDPLQAQHDLL-AEKQPSLAFVTPEHLGELVLFLCSE  236 (255)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHH-TCCHHHHHHHHH-TTTCTTCCCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccccccc-ccchHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999876432100000 000111101110 1224678999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      ...+++|++|.+|||++.
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEECCCccC
Confidence            889999999999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.4e-45  Score=316.33  Aligned_cols=244  Identities=18%  Similarity=0.216  Sum_probs=211.1

Q ss_pred             CCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILD--ELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.  +..+++.+.. ++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            35789999999998  7799999999999999999999987  5566665544 37789999999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           88 GQLDIMFNNAGISGS---GGSITS-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +++|+||||||+...   ..++.+ .+.++|++.+++|+.++++++++++|.|.++  .++||++||..+..+.++...|
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  179 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMPSYNTM  179 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCTTTHHH
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCCCchhh
Confidence            999999999998643   134555 8999999999999999999999999999764  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.|+++++.|++++||+|++|+||+++|++.....         ...+.......  ..|.+|+.+|||+|++
T Consensus       180 ~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~--~~p~~~~~~pedvA~~  248 (280)
T 3nrc_A          180 GVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS---------NFKKMLDYNAM--VSPLKKNVDIMEVGNT  248 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT---------THHHHHHHHHH--HSTTCSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc---------chHHHHHHHHh--cCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999865421         11222222222  1267899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+++...++||++|.+|||+++.
T Consensus       249 v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          249 VAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhCcccCCcCCcEEEECCCcccc
Confidence            99999999999999999999999854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.5e-46  Score=323.26  Aligned_cols=233  Identities=25%  Similarity=0.266  Sum_probs=204.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-------HHHHHHhh-----hCCeEEEecCCCHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-------LGAALAST-----IGGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-------~~~~~~~~-----~~~~~~~~D~~~~~~i~~~   79 (278)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..++     .++.++.+|++|.++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            45689999999999999999999999999999999999764       22222221     1367889999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-C
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-L  158 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~  158 (278)
                      ++++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+. +
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCCC
Confidence            999999999999999999987 456889999999999999999999999999999998755 7899999999988875 7


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCC-CCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH-GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI  237 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
                      +...|++||+++++|+++++.|++++||+||+|+|| .+.|++.......                    ..+.+|+.+|
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~--------------------~~~~~r~~~p  221 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG--------------------DEAMARSRKP  221 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS--------------------CCCCTTCBCT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc--------------------cccccCCCCH
Confidence            788999999999999999999999999999999999 7899987654310                    1256889999


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ||+|++++||+++.. ++||+++.+|||+.
T Consensus       222 edvA~~~~~l~s~~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          222 EVYADAAYVVLNKPS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHHHHHHHHHHTSCT-TCCSCEEEHHHHHH
T ss_pred             HHHHHHHHHHhCCcc-cccceEEEEcCchh
Confidence            999999999999888 99999999999876

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-45  Score=314.72  Aligned_cols=239  Identities=27%  Similarity=0.419  Sum_probs=207.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||++|||+++|++|+++|++|++. .|+.+..++..+.+     ++.++.+|++|.++++++++++.+.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999764 56665555544432     4678999999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.+++.|.++...++||++||..+..+.++...|++|
T Consensus       102 ~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (267)
T 4iiu_A          102 HGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAA  180 (267)
T ss_dssp             HCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHH
Confidence            999999999999874 4678899999999999999999999999999998754447999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|++.|++.++.|++++||++++|+||+++|++...           .++........   .|.+|+.+|+|+|++++|
T Consensus       181 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----------~~~~~~~~~~~---~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          181 KAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM-----------EESALKEAMSM---IPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC-----------CHHHHHHHHHT---CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc-----------cHHHHHHHHhc---CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998642           12222333222   367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCc
Q 023708          247 LASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~  266 (278)
                      |++++..++||++|.+|||+
T Consensus       247 L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          247 LMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCCcccCccCCEEEeCCCc
Confidence            99999999999999999996

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=5.8e-46  Score=316.45  Aligned_cols=256  Identities=24%  Similarity=0.263  Sum_probs=209.7

Q ss_pred             CCCcccCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHH
Q 023708            1 MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus         1 ~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   80 (278)
                      |++.+.+..| ..++++|++|||||++|||++++++|+++|++|++++|+.+.++++... .+.++.+|++|.+++++++
T Consensus         1 M~s~~~~~~m-~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~   78 (266)
T 3p19_A            1 MASMTGGQQM-GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAI   78 (266)
T ss_dssp             ---------------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHH
T ss_pred             CCcccCCccC-CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHH
Confidence            5554444444 3467899999999999999999999999999999999998776554332 4678899999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++.
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~~~  156 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDH  156 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCCCC
Confidence            999999999999999999874 46788999999999999999999999999999998765 6899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|++||+++++|+++++.|++++||+||+|+||+++|++.....         ............  .|.+|+++|+|+
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~--~~~~r~~~pedv  225 (266)
T 3p19_A          157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---------SQQIKDGYDAWR--VDMGGVLAADDV  225 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---------CHHHHHHHHHHH--HHTTCCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---------chhhhHHHHhhc--ccccCCCCHHHH
Confidence            999999999999999999999999999999999999999875421         111111111111  156899999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      |++++||++.+..+.+++.+....++....+
T Consensus       226 A~av~~l~~~~~~~~~~~i~i~p~~~~~~~~  256 (266)
T 3p19_A          226 ARAVLFAYQQPQNVCIREIALAPTKQQPKLA  256 (266)
T ss_dssp             HHHHHHHHHSCTTEEEEEEEEEETTCCC---
T ss_pred             HHHHHHHHcCCCCccceeeEEecCCCCCccc
Confidence            9999999999999999999998888876554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.2e-47  Score=319.16  Aligned_cols=242  Identities=31%  Similarity=0.507  Sum_probs=198.5

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +.|.+..++++|++|||||++|||++++++|+++|++|++++|+.+..+      .+.++.+|++|.++++++++++.+.
T Consensus        11 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           11 SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ---------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            4455566789999999999999999999999999999999999764322      2678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        85 ~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  162 (253)
T 2nm0_A           85 HGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAAS  162 (253)
T ss_dssp             TCSCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHHHHHH
Confidence            99999999999986 345778889999999999999999999999999998755 6899999999998887888899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|++.++.|++++||++|+|+||+++|++.....          ++.......   ..|.+|+.+|+|+|++++|
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~---~~p~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT----------DEQRANIVS---QVPLGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------------CHHHHHT---TCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC----------HHHHHHHHh---cCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999864311          111111111   2366889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |++++..+++|++|.+|||++++
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTCC
T ss_pred             HhCccccCCcCcEEEECCccccC
Confidence            99999999999999999998765

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=6.6e-46  Score=315.29  Aligned_cols=246  Identities=24%  Similarity=0.282  Sum_probs=210.0

Q ss_pred             cccCCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDE---LGAALASTI-GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |+..++++|++|||||+  +|||++++++|+++|++|++++|+++   ..+++.+.. .+.++.+|++|.++++++++++
T Consensus         1 M~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             CEEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            44557889999999999  99999999999999999999999864   334443332 3678899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           84 VSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      .+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++.
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  157 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKY  157 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTC
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCCCc
Confidence            9999999999999997632   256788999999999999999999999999999864   4799999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ..|++||++++.|++.++.|++++||++|+|+||.++|++.....         ...+. ......   .|.+|+.+|+|
T Consensus       158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~---~p~~~~~~~~d  225 (261)
T 2wyu_A          158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP---------GFTKMYDRVAQT---APLRRNITQEE  225 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT---------THHHHHHHHHHH---STTSSCCCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc---------ccHHHHHHHHhc---CCCCCCCCHHH
Confidence            999999999999999999999999999999999999999754210         11122 222222   26689999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcccCc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      +|++++||+++...++||++|.+|||+++..
T Consensus       226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          226 VGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence            9999999999989999999999999988653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.6e-46  Score=313.79  Aligned_cols=237  Identities=25%  Similarity=0.395  Sum_probs=198.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+.+..++      ...+.+|++|.++++++++++.+.+|++|
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~g~id   83 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------LFGVEVDVTDSDAVDRAFTAVEEHQGPVE   83 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------hcCeeccCCCHHHHHHHHHHHHHHcCCCC
Confidence            456889999999999999999999999999999999997643321      22488999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|++||++++
T Consensus        84 ~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  161 (247)
T 1uzm_A           84 VLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVI  161 (247)
T ss_dssp             EEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCCCChhHHHHHHHHH
Confidence            999999986 345778999999999999999999999999999998755 689999999999999899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .|++.++.|++++||++|+|+||+++|++....          .++.......   ..|.+|+.+|+|+|++++||++++
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~~~~~~~dvA~~~~~l~s~~  228 (247)
T 1uzm_A          162 GMARSIARELSKANVTANVVAPGYIDTDMTRAL----------DERIQQGALQ---FIPAKRVGTPAEVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS----------CHHHHHHHGG---GCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999986431          1111122221   236688999999999999999988


Q ss_pred             CCCceeeEEeecCCcccC
Q 023708          252 AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~  269 (278)
                      ..+++|++|.+|||++++
T Consensus       229 ~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             GTTCCSCEEEESTTTTC-
T ss_pred             ccCCcCCEEEECCCcccC
Confidence            999999999999998754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.1e-45  Score=318.33  Aligned_cols=242  Identities=27%  Similarity=0.302  Sum_probs=202.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh------CCeEEEecCCC----HHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI------GGRYIHCDVTK----EEDVESAV   80 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~------~~~~~~~D~~~----~~~i~~~~   80 (278)
                      ..+|++|++|||||++|||++++++|+++|++|++++|+. +..+++.+++      ++.++.+|++|    .+++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            4568999999999999999999999999999999999987 6665554432      36788999999    99999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCc-----cc-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-----CcEE
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSI-----TS-----LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-----KGSI  145 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~i  145 (278)
                      +++.+.+|++|+||||||+... .++     .+     .+.++|++.+++|+.+++.++++++|.|.+++.     .++|
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYP-TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC-CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCC-CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            9999999999999999998643 455     56     788999999999999999999999999976431     5799


Q ss_pred             EEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhh
Q 023708          146 ICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD  225 (278)
Q Consensus       146 v~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                      |++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||++.|++ . .          .++....... 
T Consensus       177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~----------~~~~~~~~~~-  243 (288)
T 2x9g_A          177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M----------GEEEKDKWRR-  243 (288)
T ss_dssp             EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S----------CHHHHHHHHH-
T ss_pred             EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c----------ChHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999999999999997 2 1          1122222222 


Q ss_pred             cCCCCCCCC-CCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          226 SGSLLRGRS-ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       226 ~~~~~~~~~-~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                        ..|.+|+ .+|+|+|++++||+++...++||++|.+|||+++.
T Consensus       244 --~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          244 --KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             --TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             --hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence              2366888 99999999999999999999999999999998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-46  Score=316.35  Aligned_cols=233  Identities=31%  Similarity=0.437  Sum_probs=202.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+...    ...+.++.+|++|+++++++++++.+.+|++|+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            3578999999999999999999999999999999999754321    224678999999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--CCCCCchhhhhHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--GGLASHAYSLSKEAI  170 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~sK~a~  170 (278)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..  +.++...|++||+++
T Consensus       100 lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~  177 (260)
T 3un1_A          100 LVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGL  177 (260)
T ss_dssp             EEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHHHHH
T ss_pred             EEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHHHHH
Confidence            999999874 46788999999999999999999999999999998866 79999999988864  445567899999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.|+++++.|++++||+||+|+||.++|++....             .......   ..|.+|+++|+|+|++++||  .
T Consensus       178 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------------~~~~~~~---~~p~~r~~~~~dva~av~~L--~  239 (260)
T 3un1_A          178 NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-------------THSTLAG---LHPVGRMGEIRDVVDAVLYL--E  239 (260)
T ss_dssp             HHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-------------GHHHHHT---TSTTSSCBCHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-------------HHHHHhc---cCCCCCCcCHHHHHHHHHHh--c
Confidence            9999999999999999999999999999986321             1111111   23679999999999999999  4


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      .+.++||++|++|||++.+
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HCTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCcEEEECCCeecc
Confidence            6789999999999999865

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.5e-45  Score=312.93  Aligned_cols=237  Identities=42%  Similarity=0.658  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  +.++.+|++|.++++++++++.+++|++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999999999877776655442  5678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||+++
T Consensus        83 D~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  160 (260)
T 1nff_A           83 HVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAV  160 (260)
T ss_dssp             CEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHHHHH
Confidence            9999999986 345788899999999999999999999999999998765 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.+++.++.|++++||++|+|+||.+.|++..  +         .++.    ..   ..|.+|+.+|+|+|++++||+++
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~----~~---~~~~~~~~~~~dvA~~v~~l~s~  222 (260)
T 1nff_A          161 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPED----IF---QTALGRAAEPVEVSNLVVYLASD  222 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTT----CS---CCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhh----HH---hCccCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999853  1         0110    00   23668899999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...+++|+.+.+|||++..
T Consensus       223 ~~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          223 ESSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             GGTTCCSCEEEESTTGGGS
T ss_pred             cccCCcCCEEEECCCeecc
Confidence            8899999999999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4.1e-45  Score=306.51  Aligned_cols=234  Identities=29%  Similarity=0.434  Sum_probs=204.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+..   .+++++.++.+|+++ ++++++++++.+.++++|+||||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999987652   233357789999999 99999999999999999999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--CCCchhhhhHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--LASHAYSLSKEAIIGLA  174 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~Y~~sK~a~~~l~  174 (278)
                      ||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.  ++...|++||++++.|+
T Consensus        78 Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~  155 (239)
T 2ekp_A           78 AAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLT  155 (239)
T ss_dssp             CCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHHHHHHHHH
Confidence            9986 346788999999999999999999999999999998765 6899999999998887  88889999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      +.++.|++++||++|+|+||++.|++......        .++.......   ..|.+|+.+|+|+|++++||+++...+
T Consensus       156 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~---~~p~~~~~~~~dvA~~~~~l~s~~~~~  224 (239)
T 2ekp_A          156 RALAKEWARLGIRVNLLCPGYVETEFTLPLRQ--------NPELYEPITA---RIPMGRWARPEEIARVAAVLCGDEAEY  224 (239)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--------CHHHHHHHHT---TCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHhhhcCcEEEEEEeCCccCchhhcccc--------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999998754310        1222222221   236789999999999999999998899


Q ss_pred             ceeeEEeecCCcc
Q 023708          255 ITAHNLVIDGGYT  267 (278)
Q Consensus       255 ~tG~~i~~dgG~~  267 (278)
                      +||+.+.+|||++
T Consensus       225 ~tG~~~~vdgG~~  237 (239)
T 2ekp_A          225 LTGQAVAVDGGFL  237 (239)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999975

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-46  Score=315.27  Aligned_cols=238  Identities=34%  Similarity=0.468  Sum_probs=206.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+++..+++.+++  ++.++.+|++|.++++++++++.+.+|++|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence            478999999999999999999999999999999999988877776654  366789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.++++++++++|.| ++  .++||++||..+. +.++...|++||++++
T Consensus        83 ~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~~~~~Y~asK~a~~  157 (263)
T 2a4k_A           83 GVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAFGLAHYAAGKLGVV  157 (263)
T ss_dssp             EEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHHHHHHHHHCSSHHH
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCCCcHHHHHHHHHHH
Confidence            999999986 34577889999999999999999999999999999 43  6899999999998 7777889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .|+++++.|++++||++|+|+||+++|++....          .++.......   ..|.+|+.+|+|+|++++||+++.
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---~~p~~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          158 GLARTLALELARKGVRVNVLLPGLIQTPMTAGL----------PPWAWEQEVG---ASPLGRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS----------CHHHHHHHHH---TSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999986431          2222222222   236689999999999999999999


Q ss_pred             CCCceeeEEeecCCcccC
Q 023708          252 AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~  269 (278)
                      ..+++|+.+.+|||+++.
T Consensus       225 ~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             GTTCCSCEEEESTTTTTC
T ss_pred             ccCCcCCEEEECCCcccc
Confidence            999999999999998754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-45  Score=309.67  Aligned_cols=241  Identities=33%  Similarity=0.531  Sum_probs=205.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+++..+++. ++ ++.++.+|++|.+++++    +.+.++++|+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~----~~~~~~~id~   77 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQ----FANEVERLDV   77 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHH----HHHHCSCCSE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHH----HHHHhCCCCE
Confidence            478999999999999999999999999999999999987766554 33 46788999999998884    4446789999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-CCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~a~~  171 (278)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+ +...|++||++++
T Consensus        78 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~  155 (246)
T 2ag5_A           78 LFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVI  155 (246)
T ss_dssp             EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHH
T ss_pred             EEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHHHHHHH
Confidence            999999863 46788899999999999999999999999999998765 68999999999988887 8889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      .++++++.|++++||++|+|+||.+.|++.......     ...+++. .....   ..|.+|+.+|+|+|++++||+++
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA-----RGNPEEARNDFLK---RQKTGRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH-----SSSHHHHHHHHHH---TCTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc-----ccCcHHHHHHHHh---cCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999987653211     0112222 22222   23668999999999999999999


Q ss_pred             CCCCceeeEEeecCCcccC
Q 023708          251 EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...++||++|.+|||++++
T Consensus       228 ~~~~~tG~~i~vdgG~~~~  246 (246)
T 2ag5_A          228 ESAYVTGNPVIIDGGWSLG  246 (246)
T ss_dssp             GGTTCCSCEEEECTTGGGC
T ss_pred             cccCCCCCEEEECCCccCc
Confidence            9999999999999998753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=6.4e-45  Score=312.36  Aligned_cols=243  Identities=28%  Similarity=0.462  Sum_probs=209.8

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.++++  +.++.+|++|.++++++++++ +.++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~  102 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLG  102 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSS
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhC
Confidence            4467899999999999999999999999999999999999988888777654  678899999999999999999 8889


Q ss_pred             CccEEEECCccCCCCCCc-----ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecCchhhcCCC
Q 023708           89 QLDIMFNNAGISGSGGSI-----TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGL  158 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~  158 (278)
                      ++|+||||++......++     .+.+.++|++.+++|+.+++++++.+++.|.+.     ++.++||++||..+..+.+
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  182 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI  182 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence            999999994433233333     478899999999999999999999999999861     2368999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASI  237 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  237 (278)
                      +...|++||+|+++|+++++.|++++||+|++|+||.++|++....          .++.........   |. +|+.+|
T Consensus       183 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----------~~~~~~~~~~~~---~~~~~~~~p  249 (281)
T 3ppi_A          183 GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV----------GEEALAKFAANI---PFPKRLGTP  249 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT----------CHHHHHHHHHTC---CSSSSCBCH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc----------cHHHHHHHHhcC---CCCCCCCCH
Confidence            9999999999999999999999999999999999999999987542          223333333322   44 889999


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +|+|++++||+++  .++||++|.+|||+++.
T Consensus       250 edvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          250 DEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999999999974  69999999999999864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.9e-45  Score=312.69  Aligned_cols=244  Identities=20%  Similarity=0.162  Sum_probs=206.6

Q ss_pred             CCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +|++|++|||||  ++|||++++++|+++|++|++++|+.+. .+++.+++  ++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999  9999999999999999999999998755 35555544  367889999999999999999999999


Q ss_pred             ---CccEEEECCccCCC----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           89 ---QLDIMFNNAGISGS----GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        89 ---~id~li~nag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                         ++|+||||||+...    ..++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||... .+.+...
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~~~~~~~  159 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-RAMPAYN  159 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-SCCTTTH
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-cccCchH
Confidence               99999999998642    357889999999999999999999999999999965   479999999876 6777888


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHH------HHHHHHhhcCCCCCC-CC
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE------EVCKMVRDSGSLLRG-RS  234 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~  234 (278)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++........     .+.+      +..+....  ..|.+ |+
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~p~~rr~  232 (269)
T 2h7i_A          160 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGA-----LGEEAGAQIQLLEEGWDQ--RAPIGWNM  232 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTT-----TCHHHHHHHHHHHHHHHH--HCTTCCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccccc-----chhhHHHHHHHHHHhhhc--cCCcccCC
Confidence            99999999999999999999999999999999999999876532100     0111      01111111  23667 79


Q ss_pred             CCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+|||+|++++||+++.+.++||++|.+|||+++
T Consensus       233 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          233 KDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             TCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            9999999999999999999999999999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=4.7e-46  Score=313.13  Aligned_cols=241  Identities=29%  Similarity=0.431  Sum_probs=204.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++..     ...+.++.+|++|.++++++++.+.  ++++|+|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~l   74 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----AENLKFIKADLTKQQDITNVLDIIK--NVSFDGI   74 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----CTTEEEEECCTTCHHHHHHHHHHTT--TCCEEEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----cccceEEecCcCCHHHHHHHHHHHH--hCCCCEE
Confidence            3579999999999999999999999 789999998875411     1135688999999999999996553  6899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.++...|++||+++++|
T Consensus        75 v~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~  150 (244)
T 4e4y_A           75 FLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQM  150 (244)
T ss_dssp             EECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTCCCTTBHHHHHHHHHHHHH
T ss_pred             EECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHccCCCCCchhHHHHHHHHHH
Confidence            99999874 467889999999999999999999999999999866   37999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.|++++||+||+|+||.++|++...............+++......  ...|.+|+.+|+|+|++++||++++..
T Consensus       151 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~r~~~p~dvA~~v~~l~s~~~~  228 (244)
T 4e4y_A          151 TKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEE--KEFPLNRIAQPQEIAELVIFLLSDKSK  228 (244)
T ss_dssp             HHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH--TTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHh--hcCCCCCCcCHHHHHHHHHHHhcCccc
Confidence            999999999999999999999999999877654322222223333333222  234779999999999999999999999


Q ss_pred             CceeeEEeecCCccc
Q 023708          254 FITAHNLVIDGGYTT  268 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~  268 (278)
                      ++||++|.+|||++.
T Consensus       229 ~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          229 FMTGGLIPIDGGYTA  243 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             cccCCeEeECCCccC
Confidence            999999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-45  Score=311.57  Aligned_cols=243  Identities=23%  Similarity=0.291  Sum_probs=196.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     .+.++.+|++|.++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999988877766554     2567889999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++||++
T Consensus        82 iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            99999999986 456889999999999999999999999999999998765 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +++|+++++.|+ + ||+||+|+||+++|++.......          ........    ..+...+|+|+|++++||++
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~----------~~~~~~~~----~~~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHE----------ETMAAMDT----YRAIALQPADIARAVRQVIE  223 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC-------------------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccch----------hHHHHHHh----hhccCCCHHHHHHHHHHHhc
Confidence            999999999998 5 99999999999999987653211          10111110    11235799999999999999


Q ss_pred             CCCCCceeeEEeecCCcccCcCcccc
Q 023708          250 EEAGFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      +...+.+|+.+..++|+.++.+...+
T Consensus       224 ~~~~~~~~~i~i~p~~~~~~~~~~~~  249 (264)
T 3tfo_A          224 APQSVDTTEITIRPTASGNAENLYFQ  249 (264)
T ss_dssp             SCTTEEEEEEEEEECC----------
T ss_pred             CCccCccceEEEecCccccccCccee
Confidence            99999999999999999988776544

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.4e-46  Score=313.11  Aligned_cols=234  Identities=22%  Similarity=0.246  Sum_probs=198.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh--------hCCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST--------IGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.++        .++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877766543        246789999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.+|++|+||||||+... .++ +.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+
T Consensus        83 ~~~g~iD~lvnnAg~~~~-~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMD-GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHHCCEEEEEECCCCCCC-CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHHH
T ss_pred             HhcCCCCEEEECCCcCCC-CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcchH
Confidence            999999999999998643 455 778899999999999999999999999998765 79999999999998777788999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+||+|+||+++|++.....                     ...+.+++.+|+|+|+++
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------------------~~~~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG---------------------TPFKDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT---------------------CCSCGGGSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC---------------------CCcccccCCCHHHHHHHH
Confidence            99999999999999999999999999999999999865421                     012447789999999999


Q ss_pred             HHhccCC-CCCceeeEEeecCCcccCc
Q 023708          245 LFLASEE-AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       245 ~~l~s~~-~~~~tG~~i~~dgG~~~~~  270 (278)
                      +||++++ ..++++..|.+|||.-.+.
T Consensus       219 ~~l~s~~~~~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          219 RCLLNLSENVCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             HHHHTSCTTEECCEEEEEEHHHHHC--
T ss_pred             HHHHcCCCceEeeEEEEEeeccccccc
Confidence            9999855 4567889999999976553

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-45  Score=321.84  Aligned_cols=239  Identities=24%  Similarity=0.235  Sum_probs=206.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhh------CCeEEEecCCCHH------------
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTI------GGRYIHCDVTKEE------------   74 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~------~~~~~~~D~~~~~------------   74 (278)
                      +|++|++|||||++|||++++++|+++|++|++++ |+.+..+++.+++      ++.++.+|++|.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            37899999999999999999999999999999999 9887776655443      3678899999999            


Q ss_pred             -----HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCC--------------HHHHHHHHHHHhHHHHHHHHHHHHH
Q 023708           75 -----DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLN--------------MEDVKFLLSVNLNGILHGIKHAAKA  135 (278)
Q Consensus        75 -----~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~~  135 (278)
                           +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++.+++|+.+++.++++++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999863 35677788              8999999999999999999999999


Q ss_pred             HHccCC-----CcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc
Q 023708          136 MIEGQR-----KGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG  210 (278)
Q Consensus       136 ~~~~~~-----~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~  210 (278)
                      |.+++.     .++||++||..+..+.++...|++||++++.|++.++.|++++||+||+|+||+++|++ ..       
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-------  273 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-------  273 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-------
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-------
Confidence            987431     58999999999999999999999999999999999999999999999999999999997 21       


Q ss_pred             cCCCCHHHHHHHHhhcCCCCCC-CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          211 KADMKPEEVCKMVRDSGSLLRG-RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          .++.......   ..|++ |+.+|||+|++++||+++...++||++|.+|||+++
T Consensus       274 ----~~~~~~~~~~---~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          274 ----PPAVWEGHRS---KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             ----CHHHHHHHHT---TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ----cHHHHHHHHh---hCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence                1222222222   23667 899999999999999999999999999999999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.1e-45  Score=314.56  Aligned_cols=238  Identities=26%  Similarity=0.286  Sum_probs=199.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh------CCeEEEecCCCH----HHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI------GGRYIHCDVTKE----EDVESAVR   81 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~------~~~~~~~D~~~~----~~i~~~~~   81 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++| +++..+++.+++      ++.++.+|++|.    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            4578999999999999999999999999999999999 877666554432      367889999999    99999999


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCcccCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHccCCC------cE
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGGSITSLNM-----------EDVKFLLSVNLNGILHGIKHAAKAMIEGQRK------GS  144 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~  144 (278)
                      ++.+.+|++|+||||||+.. ..++.+.+.           ++|++.+++|+.++++++++++|.|. ++ .      ++
T Consensus        87 ~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g~  163 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNLS  163 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEE
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCcE
Confidence            99999999999999999863 456778888           99999999999999999999999987 33 4      89


Q ss_pred             EEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHh
Q 023708          145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVR  224 (278)
Q Consensus       145 iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                      ||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||.+.|+ . .          ..++.......
T Consensus       164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~----------~~~~~~~~~~~  231 (276)
T 1mxh_A          164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A----------MPQETQEEYRR  231 (276)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S----------SCHHHHHHHHT
T ss_pred             EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c----------CCHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999998 1 1          12222222222


Q ss_pred             hcCCCCCCC-CCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          225 DSGSLLRGR-SASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       225 ~~~~~~~~~-~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                         ..|.+| +.+|+|+|++++||+++...++||++|.+|||+++
T Consensus       232 ---~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          232 ---KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             ---TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence               236688 99999999999999999899999999999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-45  Score=309.96  Aligned_cols=241  Identities=29%  Similarity=0.438  Sum_probs=193.9

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhh
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +....++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+.+.  +.++.+|+++.+++++++++    
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT----
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh----
Confidence            344567899999999999999999999999999999999999988887776654  56788999999998887764    


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        82 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           82 TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHHH
Confidence            478999999999864 35677888899999999999999999999999998765 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+++++|+++++.|++++||++++|+||.++|++....          .+.........   .|.+++.+|+|+|++++|
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~dva~~~~~  226 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL----------NEKQREAIVQK---IPLGTYGIPEDVAYAVAF  226 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C----------CHHHHHHHHHH---CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc----------CHHHHHHHHhc---CCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999986542          22223333332   266899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |++++..++||++|.+|||+.+
T Consensus       227 l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          227 LASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCCccCCccCcEEEECCCEee
Confidence            9999999999999999999875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4e-45  Score=312.25  Aligned_cols=239  Identities=30%  Similarity=0.405  Sum_probs=199.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+.+     ++.++.+|++|.++++++++++.+.+|+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999876 67766666554432     3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc--CCCcEEEEecCchhhcCCC-CCchhhhh
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG--QRKGSIICTSSSAAIMGGL-ASHAYSLS  166 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~~~iv~vsS~~~~~~~~-~~~~Y~~s  166 (278)
                      +|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+.  ++.++||++||..+..+.+ +...|++|
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  184 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAAS  184 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHH
Confidence            99999999987665788999999999999999999999999999999762  2368999999999988776 67789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|+++++.|++++||++++|+||.++|++.....         .++......   ...|.+|+.+|+|+|++++|
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG---------LPDRAREMA---PSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC---------ChHHHHHHh---hcCCcCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999865421         112122222   22367899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCc
Q 023708          247 LASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~  266 (278)
                      |+++...+++|++|++|||.
T Consensus       253 l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCCccccccCCEEeecCCC
Confidence            99999999999999999995

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-45  Score=305.84  Aligned_cols=230  Identities=27%  Similarity=0.332  Sum_probs=204.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecC--CCHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDV--TKEEDVESAVRL   82 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~--~~~~~i~~~~~~   82 (278)
                      ....+++|++|||||++|||++++++|+++|++|++++|+++..+++.+++      +..++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988777665543      356677777  999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~  166 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGA  166 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcch
Confidence            9999999999999999876667889999999999999999999999999999998755 789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      |++||+++++|+++++.|+++ ++|+||+|+||+++|++.......                  .   ...+...|+|+|
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~------------------~---~~~~~~~p~dva  225 (247)
T 3i1j_A          167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD------------------E---NPLNNPAPEDIM  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT------------------S---CGGGSCCGGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc------------------c---CccCCCCHHHHH
Confidence            999999999999999999976 799999999999999987643210                  0   113467899999


Q ss_pred             HHHHHhccCCCCCceeeEEee
Q 023708          242 QAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~  262 (278)
                      ++++||++++..++||++|.+
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            999999999999999999986

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5e-46  Score=318.27  Aligned_cols=232  Identities=24%  Similarity=0.283  Sum_probs=198.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-------HHHHHhh-----hCCeEEEecCCCHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-------GAALAST-----IGGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-------~~~~~~~-----~~~~~~~~D~~~~~~i~~~~   80 (278)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.     .++.++.+|++|.+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999987532       2222221     13568899999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--CC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--GL  158 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~  158 (278)
                      +++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCC
Confidence            99999999999999999987 446788999999999999999999999999999998765 789999999998877  67


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCC-CCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH-GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI  237 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
                      +...|++||+++++|+++++.|++++||+||+|+|| .++|++....-                      ..+..+..+|
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~----------------------~~~~~~~~~p  217 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP----------------------GVDAAACRRP  217 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------------------CCCGGGSBCT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc----------------------cccccccCCH
Confidence            788999999999999999999999999999999999 68999862110                      0123457899


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ||+|++++||+++...++||++| +|||....
T Consensus       218 edvA~~v~~l~s~~~~~itG~~i-~~~g~~~~  248 (274)
T 3e03_A          218 EIMADAAHAVLTREAAGFHGQFL-IDDEVLAQ  248 (274)
T ss_dssp             HHHHHHHHHHHTSCCTTCCSCEE-EHHHHHHH
T ss_pred             HHHHHHHHHHhCccccccCCeEE-EcCcchhh
Confidence            99999999999999999999999 88876643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.9e-45  Score=309.65  Aligned_cols=241  Identities=20%  Similarity=0.244  Sum_probs=206.3

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILD---ELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +|++|++|||||+  +|||++++++|+++|++|++++|+.   +..+++.+.. ...++.+|++|.++++++++++.+.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999  9999999999999999999999976   3344443332 34688999999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           88 GQLDIMFNNAGISGS---GGSITS-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      |++|+||||||+...   ..++.+ .+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHH
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCCCchHH
Confidence            999999999997642   246677 899999999999999999999999999864   4799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.....         ...+. ......   .|.+|+.+|+|+|+
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~---~p~~~~~~~~dva~  230 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---------DFRKMLAHCEAV---TPIRRTVTIEDVGN  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST---------THHHHHHHHHHH---STTSSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc---------ccHHHHHHHHhc---CCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999864310         11111 222222   25688999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccC
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++||+++...++||++|.+|||+++.
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          231 SAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999998999999999999998864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.5e-45  Score=311.68  Aligned_cols=239  Identities=30%  Similarity=0.348  Sum_probs=205.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++     .+.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999885 66665555544332     256788999999999999999987764


Q ss_pred             ------CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           89 ------QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        89 ------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                            ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.++...
T Consensus        85 ~~~~~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~  160 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIA  160 (255)
T ss_dssp             HHHSSSCEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSCCTTBHH
T ss_pred             ccccCCcccEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccCCCCcch
Confidence                  499999999986 4567889999999999999999999999999999843   579999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||+++++|+++++.|++++||+|++|+||+++|++.....         ............  .|.+|+.+|+|+|+
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~dva~  229 (255)
T 3icc_A          161 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL---------SDPMMKQYATTI--SAFNRLGEVEDIAD  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT---------TSHHHHHHHHHT--STTSSCBCHHHHHH
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc---------ccHHHHHhhhcc--CCcCCCCCHHHHHH
Confidence            9999999999999999999999999999999999999875432         122222222222  26689999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++||+++...++||++|.+|||+++
T Consensus       230 ~~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          230 TAAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHHHHhCcccCCccCCEEEecCCeeC
Confidence            99999999999999999999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-45  Score=312.19  Aligned_cols=251  Identities=31%  Similarity=0.372  Sum_probs=200.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++        ++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777665544        356789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh-hcCCCCC
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSL----NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA-IMGGLAS  160 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~~~  160 (278)
                      .+|++|+||||||+.. ..++.+.    +.++|++.+++|+.+++.++++++|.|.+++  ++||++||..+ ..+.++.
T Consensus        83 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCCCc
Confidence            9999999999999763 3466677    8999999999999999999999999997643  89999999998 8888899


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH-HHHHHhhcCCCCCCCCCCHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE-VCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ..|++||++++.++++++.|++++||++|+|+||++.|++........  .......+ ......   ..|.+|+.+|+|
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~---~~p~~~~~~~~d  234 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE--ETSKKFYSTMATMKE---CVPAGVMGQPQD  234 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------HHHHHHHHH---HCTTSSCBCHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc--hhhhhhhHHHHHHHh---cCCCcCCCCHHH
Confidence            999999999999999999999999999999999999999865321000  00000000 112211   136689999999


Q ss_pred             HHHHHHHhccCCCCC-ceeeEEeecCCcccCcCc
Q 023708          240 VAQAALFLASEEAGF-ITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       240 va~~~~~l~s~~~~~-~tG~~i~~dgG~~~~~~~  272 (278)
                      +|++++||++++..+ +||+++.+|||+++....
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~  268 (278)
T 1spx_A          235 IAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGL  268 (278)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC---
T ss_pred             HHHHHHHHcCccccCcccCcEEEECCCcccccCc
Confidence            999999999987777 999999999998865543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.4e-44  Score=310.96  Aligned_cols=243  Identities=25%  Similarity=0.304  Sum_probs=206.7

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDE---LGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+.. .+.++.+|++|.++++++++++.+.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4889999999999  99999999999999999999999864   333443322 36788999999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           88 GQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|.++  .++||++||..+..+.++...|+
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCCCccHHH
Confidence            999999999998643   2567889999999999999999999999999999753  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.|+++++.|++++||+||+|+||.++|++.....         ...+.......  ..|.+|+.+|+|+|+++
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~--~~p~~~~~~~~dva~~~  244 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT---------GFHLLMEHTTK--VNPFGKPITIEDVGDTA  244 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT---------THHHHHHHHHH--HSTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc---------chHHHHHHHHh--cCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999753210         11111111111  12668899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +||+++...+++|+++.+|||++..
T Consensus       245 ~~l~s~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          245 VFLCSDWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHcCCcccCCCCCEEEECCCcccc
Confidence            9999988999999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=8.2e-45  Score=310.83  Aligned_cols=240  Identities=20%  Similarity=0.220  Sum_probs=207.1

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDE---LGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +|++|++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+.. .+.++.+|++|.++++++++++.+.+
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999  99999999999999999999999864   344443332 36789999999999999999999999


Q ss_pred             CCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           88 GQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        88 g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++...|+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCCCchhhH
Confidence            999999999998643   257789999999999999999999999999999864   48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +||++++.|++.++.|++++||+||+|+||.++|++.....         ...+. ......   .|.+|+.+|+|+|++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~---~p~~~~~~p~dva~~  227 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA---------DFRMILKWNEIN---APLRKNVSLEEVGNA  227 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST---------THHHHHHHHHHH---STTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc---------ccHHHHHHHHhc---CCcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999864311         11121 222222   266899999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++||+++...+++|+.+.+|||++.
T Consensus       228 ~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          228 GMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCccccCCCCCEEEECCCccc
Confidence            9999999899999999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.2e-44  Score=309.22  Aligned_cols=237  Identities=24%  Similarity=0.278  Sum_probs=191.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++  ++.++.+|++|+++++++++++.+++|++|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            568999999999999999999999999999999999988888777665  477899999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      +||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ +.|+||++||..+..+.++...|++||+++
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            9999999875657889999999999999999999999999999998754 258999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+++++.|++++||+||+|+||+++|++.......           .....   ...+.+|+.+|+|+|++++||++.
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------~~~~~---~~~~~~~~~~pedvA~~v~fL~s~  250 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-----------VPQAD---LSIKVEPVMDVAHVASAVVYMASL  250 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------------CHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-----------chhhh---hcccccCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999987653211           00111   112557899999999999999997


Q ss_pred             CCCCceeeEEeecC
Q 023708          251 EAGFITAHNLVIDG  264 (278)
Q Consensus       251 ~~~~~tG~~i~~dg  264 (278)
                      +.....++.....+
T Consensus       251 ~~~~~~~~i~i~~~  264 (272)
T 4dyv_A          251 PLDANVQFMTIMAT  264 (272)
T ss_dssp             CTTSCCCEEEEEEC
T ss_pred             CCcCccceEEEecc
Confidence            65554444443333

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.7e-45  Score=308.51  Aligned_cols=235  Identities=18%  Similarity=0.166  Sum_probs=201.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-e--cchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIA-D--ILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~--r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+..+++.+++    ..+|+.|.++++++++++.+.+|++|+|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PGTIALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TTEEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CCCcccCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999 6  9988777776654    1234457888999999999999999999


Q ss_pred             EECCccCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           94 FNNAGISGSG--GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        94 i~nag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      |||||+....  .++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  155 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPARAATV  155 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHHHHHHHH
T ss_pred             EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHHHHHHHH
Confidence            9999986431  6788999999999999999999999999999998765 699999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhh---HHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEML---VNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +|+++++.|++++||+||+|+||+++|++.   .....         ++........  ..|.+|+.+|||+|++++||+
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~--~~p~~r~~~pe~vA~~v~~l~  224 (244)
T 1zmo_A          156 ALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN---------NPELRERVDR--DVPLGRLGRPDEMGALITFLA  224 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH---------CHHHHHHHHH--HCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc---------hHHHHHHHhc--CCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999987   54320         1111222220  126689999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++...++||++|.+|||++
T Consensus       225 s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          225 SRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TTTTGGGTTCEEEESTTCC
T ss_pred             CccccCccCCEEEeCCCCC
Confidence            9999999999999999974

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=7.6e-44  Score=301.95  Aligned_cols=247  Identities=29%  Similarity=0.437  Sum_probs=212.9

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      |..+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+     ++.++.+|++|.++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            5556789999999999999999999999999999999999877666554432     36788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC--ch
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS--HA  162 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~  162 (278)
                      +.++++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++.  ..
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~  164 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAA  164 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHH
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCccc
Confidence            99999999999999865356788899999999999999999999999999998755 6899999999998877776  89


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||++++.+++.++.|++++||+++.|+||.+.|++......        .+.........   .|.+++.+|+|+|+
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~dva~  233 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME--------KPELYDAWIAG---TPMGRVGQPDEVAS  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT--------CHHHHHHHHHT---CTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC--------ChHHHHHHHhc---CCcCCCCCHHHHHH
Confidence            99999999999999999999999999999999999998762210        12222222222   25688999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++|+++...+++|+.|++|||++.
T Consensus       234 ~~~~l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          234 VVQFLASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHhCchhccCCCcEEEECCceec
Confidence            99999998888999999999999863

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=4e-44  Score=306.58  Aligned_cols=257  Identities=43%  Similarity=0.675  Sum_probs=214.9

Q ss_pred             cCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHH
Q 023708            6 DTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus         6 ~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~   81 (278)
                      +++..+.+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++    ++.++.+|++|.++++++++
T Consensus         5 ~~~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A            5 STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             ------CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            34445556789999999999999999999999999999999999887766655544    46788999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-C
Q 023708           82 LAVSWKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-A  159 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~  159 (278)
                      ++.+.++++|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..++.+.+ +
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~  163 (278)
T 2bgk_A           85 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGV  163 (278)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTS
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCC
Confidence            999999999999999997643 35678899999999999999999999999999998755 78999999999998887 7


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|++||++++.+++.++.|++++||+++.|+||.+.|++.....       ...+......... .+.+.+++.+|+|
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~d  235 (278)
T 2bgk_A          164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF-------GVDSSRVEELAHQ-AANLKGTLLRAED  235 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS-------SCCHHHHHHHHHH-TCSSCSCCCCHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc-------ccchhHHHHhhhc-ccccccccCCHHH
Confidence            8899999999999999999999999999999999999999754321       0012222222222 2235678999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +|+++++|+++...+++|+.+.+|||+++...
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  267 (278)
T 2bgk_A          236 VADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  267 (278)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             HHHHHHHHcCcccccCCCCEEEECCcccccCC
Confidence            99999999998889999999999999987544

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1e-45  Score=323.33  Aligned_cols=240  Identities=28%  Similarity=0.390  Sum_probs=204.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----------hHHHHHHHhhh-----CCeEEEecCCCHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL----------DELGAALASTI-----GGRYIHCDVTKEEDV   76 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----------~~~~~~~~~~~-----~~~~~~~D~~~~~~i   76 (278)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+          .+..+++.+++     ++.++.+|++|.+++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            346899999999999999999999999999999999886          44444444332     256788999999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-----CCcEEEEecCc
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-----RKGSIICTSSS  151 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~  151 (278)
                      +++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+.+     ..|+||++||.
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            9999999999999999999999874 46788999999999999999999999999999997532     13799999999


Q ss_pred             hhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          152 AAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       152 ~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                      .+..+.++...|++||+++++|+++++.|++++||+||+|+|| +.|++....+.          ......      ...
T Consensus       181 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~----------~~~~~~------~~~  243 (322)
T 3qlj_A          181 AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA----------EMMATQ------DQD  243 (322)
T ss_dssp             HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC----------C--------------
T ss_pred             HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh----------hhhhcc------ccc
Confidence            9999999999999999999999999999999999999999999 88987643221          000000      012


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      .+..+|+|+|++++||+++...++||++|.+|||+...
T Consensus       244 ~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             cCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            35679999999999999999999999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.1e-44  Score=306.21  Aligned_cols=233  Identities=20%  Similarity=0.138  Sum_probs=189.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            4678999999999999999999999999999999999887776665543     3678899999999999999999999 


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++||
T Consensus        82 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHHHH
Confidence            99999999999874 56888999999999999999999999999999998865 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEE-EEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRV-NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +++++|+++++.|++++||+| |+|+||+++|++......          +........   .|.+ +.+|+|+|++++|
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~----------~~~~~~~~~---~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE----------QMFGKDALA---NPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch----------hhhhhhhhc---CCcc-CCCHHHHHHHHHH
Confidence            999999999999999999999 999999999998865431          111111111   1345 8999999999999


Q ss_pred             hccCCCCCceeeEEee
Q 023708          247 LASEEAGFITAHNLVI  262 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~  262 (278)
                      |++++..+++|+....
T Consensus       226 l~s~~~~~~~~~i~~~  241 (252)
T 3h7a_A          226 LYQQPKSAWTFEMEIR  241 (252)
T ss_dssp             HHHCCGGGBCSEEEEB
T ss_pred             HHhCchhcceeeEEee
Confidence            9998888888886543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.9e-43  Score=298.53  Aligned_cols=244  Identities=30%  Similarity=0.423  Sum_probs=211.3

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--C-eEEEecCCCHHHHHHHHHHHHhhc
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--G-RYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~-~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++++  + .++.+|++|.++++++++++.+ +
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~   83 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-V   83 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-h
Confidence            3456889999999999999999999999999999999999877776655442  4 6789999999999999999988 8


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC--chhhh
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS--HAYSL  165 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~  165 (278)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+..  ..|++
T Consensus        84 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~  161 (254)
T 2wsb_A           84 APVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMA  161 (254)
T ss_dssp             SCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBHHHHH
T ss_pred             CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcchHHHH
Confidence            99999999999863 35778889999999999999999999999999998765 6899999999998887777  89999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||++++.+++.++.+++++||+++.|+||.+.|++......        .++........   .|.+++.+|+|+|++++
T Consensus       162 sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~dva~~~~  230 (254)
T 2wsb_A          162 SKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE--------RPELFETWLDM---TPMGRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT--------CHHHHHHHHHT---STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc--------ChHHHHHHHhc---CCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998764320        12222222222   25688999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+++...+++|+++.+|||++.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCcccccccCCEEEECCCEec
Confidence            99998889999999999999863

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.5e-43  Score=300.45  Aligned_cols=245  Identities=31%  Similarity=0.418  Sum_probs=211.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+.+     ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 766665554432     2567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|++|
T Consensus        83 ~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (261)
T 1gee_A           83 FGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS  161 (261)
T ss_dssp             HSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHH
Confidence            99999999999986 34567889999999999999999999999999999875435899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.+++.++.+++++||+++.|+||.+.|++......        .++.......   ..|.+++.+|+|+|+++++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~  230 (261)
T 1gee_A          162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--------DPEQRADVES---MIPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--------SHHHHHHHHT---TCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--------ChhHHHHHHh---cCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998765321        1222222221   2356889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...+++|+++.+|||+++.
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          231 LASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCccccCCCCcEEEEcCCcccC
Confidence            99988899999999999998764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=3.9e-44  Score=325.87  Aligned_cols=243  Identities=29%  Similarity=0.385  Sum_probs=209.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD--ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+.  +...+..+..++.++.||++|.++++++++++.+.+++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGG  287 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999999999999863  44455556667889999999999999999999999986


Q ss_pred             -ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           90 -LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        90 -id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                       +|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.+.|.+++ .++||++||..+..+.++...|++||+
T Consensus       288 ~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~YaasKa  365 (454)
T 3u0b_A          288 KVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTKA  365 (454)
T ss_dssp             CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence             999999999874 46889999999999999999999999999999987654 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|+++++.|++++||+||+|+||+++|++.....           ..........  .+.+|.++|+|+|++++||+
T Consensus       366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----------~~~~~~~~~~--~~l~r~g~pedvA~~v~fL~  432 (454)
T 3u0b_A          366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIP-----------LATREVGRRL--NSLFQGGQPVDVAELIAYFA  432 (454)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------------CHHHHHS--BTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc-----------hhhHHHHHhh--ccccCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999875432           1111111111  25688999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++...++||++|.+|||..+|
T Consensus       433 s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          433 SPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             CGGGTTCCSCEEEESSSBSCC
T ss_pred             CCccCCCCCcEEEECCccccc
Confidence            999999999999999999876

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.9e-43  Score=297.82  Aligned_cols=238  Identities=29%  Similarity=0.450  Sum_probs=208.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999987776665443      36788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCC---cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           91 DIMFNNAGISGSGGS---ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        91 d~li~nag~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |+||||||.... .+   +.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        82 d~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGITGN-SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCCCC-TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCCC-CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHH
Confidence            999999997633 34   78889999999999999999999999999998765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.|++++||+++.++||.+.|++......        .+........   ..|.+++.+|+|+|+++++|
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l  228 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD--------QPELRDQVLA---RIPQKEIGTAAQVADAVMFL  228 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT--------SHHHHHHHHT---TCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC--------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999998754220        1111122222   23668899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++..+++|++|.+|||++
T Consensus       229 ~~~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          229 AGEDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             HSTTCTTCCSCEEEESTTGG
T ss_pred             cCchhhcccCCEEEECCcee
Confidence            99888999999999999986

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=9.1e-44  Score=302.27  Aligned_cols=231  Identities=29%  Similarity=0.359  Sum_probs=200.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.+|
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999999988877765543     367889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  184 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASKW  184 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchHHHHHH
Confidence            9999999999855667889999999999999999999999999999998765 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ++++|+++++.|++++||++++|+||.++|++......                     ..+..+..+|+|+|++++||+
T Consensus       185 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------------------~~~~~~~~~p~dvA~~v~~l~  243 (262)
T 3rkr_A          185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA---------------------KKSALGAIEPDDIADVVALLA  243 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc---------------------ccccccCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999998654210                     013366889999999999999


Q ss_pred             cCCCCCceeeEEeecCCc
Q 023708          249 SEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~  266 (278)
                      ++...+++|+.+..+.|.
T Consensus       244 s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          244 TQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             TCCTTCCEEEEEEECCCC
T ss_pred             cCccccccCcEEeccccC
Confidence            999999999999988764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-44  Score=318.58  Aligned_cols=230  Identities=24%  Similarity=0.260  Sum_probs=200.8

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-------HHHHHh---hh--CCeEEEecCCCHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-------GAALAS---TI--GGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-------~~~~~~---~~--~~~~~~~D~~~~~~i~~~   79 (278)
                      ..+|++|++|||||++|||+++|++|+++|++|++++|+.+.       +.+..+   ..  ++.++.+|++|+++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            457899999999999999999999999999999999987652       222222   11  256788999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--C
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--G  157 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~  157 (278)
                      ++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+  .
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~  197 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWF  197 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGT
T ss_pred             HHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCC
Confidence            999999999999999999987 446788999999999999999999999999999998765 789999999998877  7


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCC-CCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCC
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH-GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS  236 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
                      ++...|++||++++.|++.++.|++ .||+||+|+|| .++|++.....                     ...+.+|+.+
T Consensus       198 ~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~---------------------~~~~~~r~~~  255 (346)
T 3kvo_A          198 KQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLG---------------------GPGIESQCRK  255 (346)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHC---------------------C--CGGGCBC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhc---------------------cccccccCCC
Confidence            8889999999999999999999999 89999999999 59998765321                     0013477899


Q ss_pred             HHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          237 IEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      |+|+|++++||+++ ..++||++| +|||+.
T Consensus       256 pedvA~~v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          256 VDIIADAAYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             THHHHHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence            99999999999999 899999998 999965

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.8e-43  Score=298.13  Aligned_cols=243  Identities=30%  Similarity=0.436  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+    ++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999999987776665543    467889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++..++||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           82 PVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            999999999986 4457788999999999999999999999999999987552389999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          169 AIIGLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       169 a~~~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +++.+++.++.|+.  ++||+++.|+||++.|++....          .........  ....|.+++.+|+|+|+++++
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL----------PGAEEAMSQ--RTKTPMGHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS----------TTHHHHHTS--TTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc----------CchhhhHHH--hhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999987  8899999999999999986531          111111111  122366889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...+++|+.+.+|||++.
T Consensus       229 l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          229 LASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HcCcccccccCcEEEECCCccC
Confidence            9998889999999999999864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2e-45  Score=322.42  Aligned_cols=248  Identities=19%  Similarity=0.154  Sum_probs=201.3

Q ss_pred             CCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchH---------HHHHHHhhhC--------CeEEEecCCCH--H
Q 023708           16 TGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDE---------LGAALASTIG--------GRYIHCDVTKE--E   74 (278)
Q Consensus        16 ~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~---------~~~~~~~~~~--------~~~~~~D~~~~--~   74 (278)
                      ++|++|||||++  |||+++|++|+++|++|+++++.+.         ..+.......        +.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999975  9999999999999999998776542         1111111111        35678888887  7


Q ss_pred             ------------------HHHHHHHHHHhhcCCccEEEECCccC-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 023708           75 ------------------DVESAVRLAVSWKGQLDIMFNNAGIS-GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA  135 (278)
Q Consensus        75 ------------------~i~~~~~~~~~~~g~id~li~nag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  135 (278)
                                        +++++++++.+.+|++|+||||||+. ....++.+.+.++|++.+++|+.++++++++++|.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975 24578899999999999999999999999999999


Q ss_pred             HHccCCCcEEEEecCchhhcCCCCCc-hhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhh-----
Q 023708          136 MIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKY-----  208 (278)
Q Consensus       136 ~~~~~~~~~iv~vsS~~~~~~~~~~~-~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~-----  208 (278)
                      |.++   |+||++||..+..+.++.. .|++||+|+.+|+++++.|+++ +||+||+|+||+++|++........     
T Consensus       161 m~~~---g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HhhC---CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            9763   8999999999999999985 9999999999999999999998 8999999999999999987532100     


Q ss_pred             ----------------hccCCCCHH-------------HHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeE
Q 023708          209 ----------------LGKADMKPE-------------EVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHN  259 (278)
Q Consensus       209 ----------------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~  259 (278)
                                      ....+.+.+             +......  ...|.+|+.+|+|+|++++||+++.+.++||++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~  315 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSE--KYAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHH--HHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHh--hcCcccCcCCHHHHHHHHHHHhCchhccccCcE
Confidence                            000000000             0111111  123779999999999999999999999999999


Q ss_pred             EeecCCccc
Q 023708          260 LVIDGGYTT  268 (278)
Q Consensus       260 i~~dgG~~~  268 (278)
                      |.+|||+++
T Consensus       316 i~vdGG~~~  324 (329)
T 3lt0_A          316 IYVDNGLNI  324 (329)
T ss_dssp             EEESTTGGG
T ss_pred             EEEcCCeeE
Confidence            999999986

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-44  Score=303.23  Aligned_cols=249  Identities=27%  Similarity=0.356  Sum_probs=207.5

Q ss_pred             cCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH----HHhh--hCCeEEEecCCCHHHHHHH
Q 023708            6 DTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA----LAST--IGGRYIHCDVTKEEDVESA   79 (278)
Q Consensus         6 ~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~----~~~~--~~~~~~~~D~~~~~~i~~~   79 (278)
                      .+++....++++|++|||||++|||++++++|+++|++|++++|+.+...+    +.+.  .++.++.+|++|.++++++
T Consensus         3 ~~~~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   82 (265)
T 1h5q_A            3 HMAPGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   82 (265)
T ss_dssp             ---CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHH
Confidence            344555567899999999999999999999999999999999995433322    2222  1367889999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      ++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..+.+.
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  161 (265)
T 1h5q_A           83 IQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS  161 (265)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc
Confidence            9999999999999999999863 457788999999999999999999999999999987553589999999988766542


Q ss_pred             -------CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          160 -------SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       160 -------~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                             ...|++||++++.+++.++.|++++||+++.|+||.+.|++....          .+........   ..|.+
T Consensus       162 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~  228 (265)
T 1h5q_A          162 SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----------DKKIRDHQAS---NIPLN  228 (265)
T ss_dssp             ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----------CHHHHHHHHH---TCTTS
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc----------chhHHHHHHh---cCccc
Confidence                   678999999999999999999999999999999999999986531          1221222221   23568


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++.+|+|+|+++++|+++...+++|+++.+|||+++
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          229 RFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            899999999999999998889999999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-44  Score=308.91  Aligned_cols=238  Identities=26%  Similarity=0.354  Sum_probs=195.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------CeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+++.      +.++.+|++|.++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999887776655432      37889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcCCCCCchhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      .+|++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ ..|+||++||..+..+.++...|+
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            9999999999999875657889999999999999999999999999999998754 358999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+++++|+++++.|++++||+||+|+||+++|++.........              ......+.+|+.+|||+|+++
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------------~~~~~~~~~~~~~pedvA~~v  253 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL--------------QANGEVAAEPTIPIEHIAEAV  253 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE--------------CTTSCEEECCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh--------------hhhhcccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999999998765421100              001122457899999999999


Q ss_pred             HHhccCCCC-CceeeEEeec
Q 023708          245 LFLASEEAG-FITAHNLVID  263 (278)
Q Consensus       245 ~~l~s~~~~-~~tG~~i~~d  263 (278)
                      +||++.+.. .+++.++.-.
T Consensus       254 ~fL~s~~~~~~i~~~~i~p~  273 (281)
T 4dry_A          254 VYMASLPLSANVLTMTVMAT  273 (281)
T ss_dssp             HHHHHSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccccEEEEec
Confidence            999986644 4455444433

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=7.3e-44  Score=303.25  Aligned_cols=244  Identities=29%  Similarity=0.368  Sum_probs=187.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|+++.++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999887766654432     3677899999999999999999999


Q ss_pred             c-CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           87 K-GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        87 ~-g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      + +++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+.+ .++||++||..+..+.++...|++
T Consensus        89 ~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  166 (266)
T 1xq1_A           89 FGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSA  166 (266)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHH
T ss_pred             hCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHHH
Confidence            8 8999999999976 345778889999999999999999999999999998755 689999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||++++.+++.++.+++++||+++.|+||.+.|++.....         .+........   ..|.+++++|+|+|++++
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          167 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---------DDEFKKVVIS---RKPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---------CHHHHHHHHh---cCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999865432         0111111111   125678999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +|++++..+++|++|.+|||+++.
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEET
T ss_pred             HHcCccccCccCcEEEEcCCcccc
Confidence            999988899999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-43  Score=303.22  Aligned_cols=242  Identities=29%  Similarity=0.438  Sum_probs=207.8

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ...+++|++|||||++|||++++++|+++|++|++++|+++..+++.+++     ++.++.+|++|.++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999998877766654433     3567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++|
T Consensus       119 ~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~as  196 (285)
T 2c07_A          119 HKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSS  196 (285)
T ss_dssp             CSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHHH
Confidence            99999999999986 345778899999999999999999999999999998755 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.+++.++.|+++.||++++|+||.++|++....          .+........   ..|.+++.+|+|+|+++++
T Consensus       197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI----------SEQIKKNIIS---NIPAGRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C----------CHHHHHHHHT---TCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc----------CHHHHHHHHh---hCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999975421          1222222221   2366889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+++...+++|++|.+|||+++
T Consensus       264 l~~~~~~~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGLSP  285 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCCcCCCCCCEEEeCCCccC
Confidence            9998889999999999999863

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.3e-43  Score=296.38  Aligned_cols=234  Identities=26%  Similarity=0.349  Sum_probs=200.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999987776665443     367789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++  |+||++||..+..+.++...|++||+
T Consensus        84 ~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            999999999986 446788999999999999999999999999999998754  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC--CCHHHHHHHHHH
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS--ASIEDVAQAALF  246 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~edva~~~~~  246 (278)
                      ++++|+++++.|++++||+||+|+||+++|++.....         . ..........   | +++  ++|||+|++++|
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~-~~~~~~~~~~---~-~~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT---------H-TATKEMYEQR---I-SQIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC---------C-HHHHHHHHHH---T-TTSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc---------c-hhhHHHHHhc---c-cccCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999864310         1 1111112211   2 455  899999999999


Q ss_pred             hccCCCCCceeeEEeecCC
Q 023708          247 LASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG  265 (278)
                      |+++...+.+++ +.+++.
T Consensus       227 l~s~~~~~~~~~-i~i~~~  244 (247)
T 2jah_A          227 AVTAPHHATVHE-IFIRPT  244 (247)
T ss_dssp             HHHSCTTEEEEE-EEEEET
T ss_pred             HhCCCccCccce-EEecCC
Confidence            999888888776 455543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=4.2e-43  Score=296.47  Aligned_cols=243  Identities=32%  Similarity=0.463  Sum_probs=210.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++     ++.++.+|++|.++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            44688999999999999999999999999999999999987766554432     3667899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||.... .++ +.+.++|++.+++|+.++++++++++|.|.+.+ .++||++||..+..+.++...|++|
T Consensus        86 ~~~~d~vi~~Ag~~~~-~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  162 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHHH
Confidence            9999999999998643 344 788999999999999999999999999998755 6899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.+++.++.+++++||+++.++||.+.|++.....         .+.........   .|.+++++|+|+|+++++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI---------TPEIEQKMLQH---TPIRRLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------CHHHHHHHHHT---CSSCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc---------ChHHHHHHHhc---CCcccCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999865321         23222333222   266889999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++++...+++|+.+++|||....
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          231 LCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HhCCccccCCCcEEEECCceecc
Confidence            99988889999999999998754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-44  Score=299.23  Aligned_cols=224  Identities=21%  Similarity=0.242  Sum_probs=189.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+++.+++  ++.++.+|++|.++++++++++.+.+|++|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            45799999999999999999999999999999999988877766554  3678899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++  ++||++||..+..+.++...|++||+++++
T Consensus        81 lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           81 VLHCAGTG-EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             EEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             EEECCCCC-CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999986 456788999999999999999999999999999997743  599999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc-CC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS-EE  251 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s-~~  251 (278)
                      |+++++.|++++||++|+|+||+++|++......                      .+.+++.+|||+|+.++|+++ +.
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------------------~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------------------VDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------------------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999998654210                      022578899999999999998 56


Q ss_pred             CCCceeeEEeec
Q 023708          252 AGFITAHNLVID  263 (278)
Q Consensus       252 ~~~~tG~~i~~d  263 (278)
                      ..+++|-.+.-.
T Consensus       216 ~~~i~~i~~~~~  227 (235)
T 3l6e_A          216 SCHVTDLFIGRN  227 (235)
T ss_dssp             SEEEEEEEEEEC
T ss_pred             CcceeeEEEecC
Confidence            778888665543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.5e-43  Score=300.31  Aligned_cols=240  Identities=20%  Similarity=0.197  Sum_probs=202.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHH---cCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAE---NGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~---~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      +|++|++|||||++|||++++++|++   +|++|++++|+++..+++.+++       ++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   8999999999987777665443       2567899999999999999999


Q ss_pred             Hh--hcCCcc--EEEECCccCCC-CCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-CCCcEEEEecCchhhcC
Q 023708           84 VS--WKGQLD--IMFNNAGISGS-GGSITS-LNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSSSAAIMG  156 (278)
Q Consensus        84 ~~--~~g~id--~li~nag~~~~-~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~vsS~~~~~~  156 (278)
                      .+  .+|++|  +||||||+... ..++.+ .+.++|++.+++|+.++++++++++|.|.++ +..|+||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            98  678899  99999998643 246777 7899999999999999999999999999775 12689999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCC
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS  236 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
                      .++...|++||+++++|+++++.|+++  |+||+|+||+++|++........     ..++........   .|.+|+.+
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~---~p~~~~~~  232 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETS-----KDPELRSKLQKL---KSDGALVD  232 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHC-----SCHHHHHHHHHH---HHTTCSBC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhcc-----CChhHHHHHHHh---hhcCCcCC
Confidence            999999999999999999999999974  99999999999999976543210     012222222222   24588999


Q ss_pred             HHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          237 IEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      |+|+|+.++||+++ ..++||++|.+||
T Consensus       233 p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          233 CGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            99999999999985 6899999999997

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.7e-44  Score=299.61  Aligned_cols=221  Identities=24%  Similarity=0.320  Sum_probs=191.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+               +|++|+++++++++++    |++|+|
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~----g~id~l   63 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETI----GAFDHL   63 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHH----CSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHh----CCCCEE
Confidence            578999999999999999999999999999999999864               8999999999988754    899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||......++.+.+.++|++.+++|+.++++++++++|.|.+   .|+||++||..+..+.++...|++||+++++|
T Consensus        64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~  140 (223)
T 3uce_A           64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVANTYVKAAINAAIEAT  140 (223)
T ss_dssp             EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCCCchHHHHHHHHHHHH
Confidence            999998766678899999999999999999999999999999865   47999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +++++.|+++  |+||+|+||+++|++.......       ..+.......  ...|.+|+.+|+|+|++++|+++  +.
T Consensus       141 ~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~dvA~~~~~l~~--~~  207 (223)
T 3uce_A          141 TKVLAKELAP--IRVNAISPGLTKTEAYKGMNAD-------DRDAMYQRTQ--SHLPVGKVGEASDIAMAYLFAIQ--NS  207 (223)
T ss_dssp             HHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHH-------HHHHHHHHHH--HHSTTCSCBCHHHHHHHHHHHHH--CT
T ss_pred             HHHHHHhhcC--cEEEEEEeCCCcchhhhhcchh-------hHHHHHHHHh--hcCCCCCccCHHHHHHHHHHHcc--CC
Confidence            9999999987  9999999999999987542110       0111111111  12367999999999999999997  47


Q ss_pred             CceeeEEeecCCcccC
Q 023708          254 FITAHNLVIDGGYTTG  269 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~  269 (278)
                      ++||++|.+|||++++
T Consensus       208 ~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          208 YMTGTVIDVDGGALLG  223 (223)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCCCcEEEecCCeecC
Confidence            9999999999998864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-43  Score=299.24  Aligned_cols=246  Identities=27%  Similarity=0.409  Sum_probs=206.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh------------hCCeEEEecCCCHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST------------IGGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~   80 (278)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.            .++.++.+|++|.+++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            457899999999999999999999999999999999998777665443            24678899999999999999


Q ss_pred             HHHHhhcCCc-cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           81 RLAVSWKGQL-DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        81 ~~~~~~~g~i-d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      +++.+.+|++ |+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            9999999999 9999999986 3467788999999999999999999999999999987543589999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|++||++++.+++.++.+++++||+++.|+||.+.|++.....          +........   ..|.+++.+|+|
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~---~~~~~~~~~~~d  228 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP----------QKVVDKITE---MIPMGHLGDPED  228 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------CTGG---GCTTCSCBCHHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC----------HHHHHHHHH---hCCCCCCCCHHH
Confidence            9999999999999999999999999999999999999999865321          111111111   125678999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcccCcCc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      +|+++++++++...+++|+.+.+|||+++..+.
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            999999999988889999999999999875443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=7.7e-43  Score=293.19  Aligned_cols=240  Identities=27%  Similarity=0.379  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++. +..++.+|++|.++++++++    .++++|
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id   78 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----SVGPVD   78 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH----HcCCCC
Confidence            4688999999999999999999999999999999999987777665543 46778999999999988876    568899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.+++++++++.+.|.+++..++||++||..+..+.++...|++||++++
T Consensus        79 ~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  157 (244)
T 3d3w_A           79 LLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD  157 (244)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHH
Confidence            999999976 3467788999999999999999999999999999987543589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.|++++||+++.|+||.+.|++....+.        .+.........   .|.+++.+|+|+|+++++++++.
T Consensus       158 ~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS--------DPHKAKTMLNR---IPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC--------STTHHHHHHHT---CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEEeccccccchhhhcc--------ChHHHHHHHhh---CCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999899999999999999998654320        11111222222   25688999999999999999988


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++|+++.+|||++.
T Consensus       227 ~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          227 SGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCEEEECCCccC
Confidence            88999999999999864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-43  Score=302.35  Aligned_cols=239  Identities=23%  Similarity=0.284  Sum_probs=197.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+|+ |++|||||++|||++++++|+++|++|++++|+.+..+++.+++    ++.++.+|++|.++++++++++.+.+|
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5667 99999999999999999999999999999999988777766554    467889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCc-EEEEecCchhhcCCCCCchhhhhH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKG-SIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ++|+||||||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .| +||++||..+..+.++...|++||
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~asK  175 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYGGTK  175 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHHHHH
Confidence            9999999999864446788999999999999999999999999999998765 57 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.|+++++.|++++||+||+|+||+++|++.......       ..+.......      .....+|+|+|++++||
T Consensus       176 aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~------~~~~~~pedvA~~v~~l  242 (272)
T 2nwq_A          176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG-------DQARYDKTYA------GAHPIQPEDIAETIFWI  242 (272)
T ss_dssp             HHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------------CCCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc-------chHHHHHhhc------cCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999986432100       0000111111      12357999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +++ ..+++|+.|.+|+|..
T Consensus       243 ~s~-~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          243 MNQ-PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             HTS-CTTEEEEEEEEEETTE
T ss_pred             hCC-CccCccceEEEeeccC
Confidence            985 5789999999999854

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3.8e-43  Score=298.44  Aligned_cols=242  Identities=32%  Similarity=0.456  Sum_probs=203.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++  ++.++.+|++|.++++++++++.+.++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999999999999999999999999999999999877666665544  36788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcc-----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-----CCcEEEEecCchhhcCCCCC
Q 023708           91 DIMFNNAGISGSGGSIT-----SLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-----RKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        91 d~li~nag~~~~~~~~~-----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~  160 (278)
                      |+||||||.........     +.+.++|++.+++|+.+++.++++++|.|.++.     +.++||++||..+..+.++.
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  167 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  167 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCC
Confidence            99999999864432222     478999999999999999999999999998751     36899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIED  239 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ed  239 (278)
                      ..|++||++++.+++.++.|++++||++++|+||+++|++.....           ++.......  ..|. +++.+|+|
T Consensus       168 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~d  234 (265)
T 2o23_A          168 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP-----------EKVCNFLAS--QVPFPSRLGDPAE  234 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------------CHHHH--TCSSSCSCBCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC-----------HHHHHHHHH--cCCCcCCCCCHHH
Confidence            999999999999999999999999999999999999999865321           111111111  1255 78999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +|+++++|++  ..+++|+++.+|||+++.
T Consensus       235 va~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          235 YAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHhh--cCccCceEEEECCCEecC
Confidence            9999999995  468999999999998764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=9.8e-43  Score=293.02  Aligned_cols=240  Identities=30%  Similarity=0.443  Sum_probs=208.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+      ++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999887666554322      3667899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|+++
T Consensus        83 ~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           83 VDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             SSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHHH
Confidence            999999999999763 45678899999999999999999999999999998755 6899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.+++.++.|++++||+++.++||.+.|++....          ...........   .|.+++.+|+|+|+++++
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL----------SEEIKQKYKEQ---IPLGRFGSPEEVANVVLF  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----------CHHHHHHHHHT---CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc----------cHHHHHHHHhc---CCCCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999986421          11111122111   255789999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcc
Q 023708          247 LASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++...+++|+++.+|||++
T Consensus       228 l~~~~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          228 LCSELASYITGEVIHVNGGMF  248 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCchhhcCCCcEEEeCCCcC
Confidence            999888899999999999973

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.7e-43  Score=299.33  Aligned_cols=234  Identities=20%  Similarity=0.218  Sum_probs=198.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh--hhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS--TIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+  ..+..+..+   |.++++++++++.+.+|++|+|||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~---d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE---CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            689999999999999999999999999999998765554432  112222222   677788999999999999999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||++++.|++
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  157 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLAN  157 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHHHHHHHHHH
Confidence            999863456788999999999999999999999999999998765 6899999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCC---------CChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          176 STACELGKHGIRVNCISPHGV---------PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +++.|++++||+||+|+||.+         +|++...           .++........   .|.+|+.+|+|+|++++|
T Consensus       158 ~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~-----------~~~~~~~~~~~---~p~~~~~~p~dvA~~v~~  223 (254)
T 1zmt_A          158 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT-----------NPEHVAHVKKV---TALQRLGTQKELGELVAF  223 (254)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT-----------CHHHHHHHHHH---SSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHhhhcCcEEEEEecCccccccccccCCCccccc-----------ChHHHHHHhcc---CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999         7776431           12222222222   266899999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+++...++||++|.+|||++..
T Consensus       224 l~s~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          224 LASGSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             HHTTSCGGGTTCEEEESTTCCCC
T ss_pred             HhCcccCCccCCEEEECCCchhh
Confidence            99998999999999999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=9.1e-43  Score=292.63  Aligned_cols=237  Identities=29%  Similarity=0.460  Sum_probs=205.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++     ++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999984 78876665554332     25678899999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||+++
T Consensus        81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            99999999863 45778899999999999999999999999999998755 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc-c
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-S  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~-s  249 (278)
                      +.+++.++.+++++||+++.|+||.+.|++....          .+........   ..|.+++.+|+|+|+++++|+ +
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~  225 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----------GEDMEKKILG---TIPLGRTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----------CHHHHHHHHT---SCTTCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc----------ChHHHHHHhh---cCCCCCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999986531          1221122221   236688999999999999999 6


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+++|+.|.+|||+++
T Consensus       226 ~~~~~~~G~~~~v~gG~~~  244 (244)
T 1edo_A          226 PAASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             SGGGGCCSCEEEESTTTTC
T ss_pred             CccCCcCCCEEEeCCCccC
Confidence            7788999999999999863

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.6e-43  Score=295.65  Aligned_cols=239  Identities=31%  Similarity=0.428  Sum_probs=185.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+++..+++.+.+     ++.++.+|++|.++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4788999999999999999999999999999998 56655544443322     36788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        82 ~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 GRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             SCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHHH
Confidence            9999999999976 335677888899999999999999999999999998755 68999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.+++.++.|++++||+++.++||.+.|++....          .+........   ..|.+++.+|+|+|++++++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l  226 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL----------PDKVKEMYLN---NIPLKRFGTPEEVANVVGFL  226 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----------CHHHHHHHHT---TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc----------chHHHHHHHh---hCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999975421          2222222222   23568899999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++..+++|+.+++|||++
T Consensus       227 ~~~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          227 ASDDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTC-
T ss_pred             cCcccccccCcEEEeCCCcc
Confidence            99888899999999999975

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.6e-43  Score=301.05  Aligned_cols=242  Identities=29%  Similarity=0.374  Sum_probs=204.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.     .++.++.+|++|.++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999876544443322     13678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcc-cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--CCCCchh
Q 023708           87 KGQLDIMFNNAGISGSGGSIT-SLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y  163 (278)
                      +|++|+||||||......++. +.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+  .++...|
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPY  187 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHHH
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCcccH
Confidence            999999999999864435666 788899999999999999999999999998755 689999999999887  7788899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.+++.++.|+++++ +++.|+||+++|++...          ..++........   .|.+++.+|+|+|++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~~---~p~~~~~~~~dvA~~  253 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF----------ASKDMKAKWWQL---TPLGREGLTQELVGG  253 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS----------CCHHHHHHHHHH---STTCSCBCGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc----------cChHHHHHHHHh---CCccCCcCHHHHHHH
Confidence            9999999999999999999999 99999999999998631          122222222222   256889999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++|+++...+++|++|.+|||+++
T Consensus       254 ~~~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          254 YLYLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCccCCEEEECCCeec
Confidence            9999999889999999999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-43  Score=294.56  Aligned_cols=235  Identities=25%  Similarity=0.352  Sum_probs=196.6

Q ss_pred             ccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708            9 KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +....++++|++|||||++|||++++++|+++|++|++++|+++..+++   ....++ +|+  .++++++++++    .
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~D~--~~~~~~~~~~~----~   80 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVV-CDL--RKDLDLLFEKV----K   80 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEE-CCT--TTCHHHHHHHS----C
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---CCeEEE-eeH--HHHHHHHHHHh----c
Confidence            3445688999999999999999999999999999999999987544333   134556 999  55677776654    3


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus        81 ~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (249)
T 1o5i_A           81 EVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARM  158 (249)
T ss_dssp             CCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHHHHHH
Confidence            899999999976 446788999999999999999999999999999998765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH-HHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC-KMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +++.|+++++.|++++||++|+|+||+++|++.....          +.... ....   ..|.+|+.+|+|+|++++||
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~~---~~p~~~~~~~~dvA~~i~~l  225 (249)
T 1o5i_A          159 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL----------SEEKKKQVES---QIPMRRMAKPEEIASVVAFL  225 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS----------CHHHHHHHHT---TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc----------hhhHHHHHHh---cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999865321          11111 1211   23668999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++...+++|+++.+|||++.
T Consensus       226 ~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          226 CSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             cCccccCCCCCEEEECCCccc
Confidence            999889999999999999864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=8.4e-43  Score=294.06  Aligned_cols=234  Identities=18%  Similarity=0.243  Sum_probs=194.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+++  ++.++.+|++|.++++++++++.+.+|++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            68999999999999999999999999999999988777776654  3678899999999999999999999999999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||+.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.++...|++||+++++|++
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  159 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHHHHHHHHHH
Confidence            999864346788999999999999999999999999999998755 6899999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          176 STACELGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      +++.|++++||+||+|+||+++ |++....+..       .+........      .....+|||+|++++||+++ ..+
T Consensus       160 ~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~-------~~~~~~~~~~------~~~~~~p~dvA~~v~~l~s~-~~~  225 (248)
T 3asu_A          160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-------DDGKAEKTYQ------NTVALTPEDVSEAVWWVSTL-PAH  225 (248)
T ss_dssp             HHHHHTTTSCCEEEEEEECSBCC-----------------------------------CCBCHHHHHHHHHHHHHS-CTT
T ss_pred             HHHHHhhhcCcEEEEEeccccccCcchhhcccC-------chHHHHHHHh------ccCCCCHHHHHHHHHHHhcC-Ccc
Confidence            9999999999999999999999 9985422100       0000111111      12346999999999999986 578


Q ss_pred             ceeeEEeecCCc
Q 023708          255 ITAHNLVIDGGY  266 (278)
Q Consensus       255 ~tG~~i~~dgG~  266 (278)
                      ++|+.+.++++.
T Consensus       226 ~~g~~i~v~~~~  237 (248)
T 3asu_A          226 VNINTLEMMPVT  237 (248)
T ss_dssp             CCCCEEEECCTT
T ss_pred             ceeeEEEEcccc
Confidence            999999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2e-43  Score=307.92  Aligned_cols=250  Identities=21%  Similarity=0.169  Sum_probs=199.2

Q ss_pred             ccccCCCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecchH-----------HHHHHHhhh--C-----CeEEEe
Q 023708            9 KLSSKRLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILDE-----------LGAALASTI--G-----GRYIHC   68 (278)
Q Consensus         9 ~~~~~~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~~-----------~~~~~~~~~--~-----~~~~~~   68 (278)
                      +|+.++|++|++|||||  ++|||+++|++|+++|++|++++|++.           ..+++. ++  +     ..++.+
T Consensus         1 ~M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   79 (315)
T 2o2s_A            1 SAFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDR-KLPDGSLIEFAGVYPL   79 (315)
T ss_dssp             ---CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHH-BCTTSCBCCCSCEEEC
T ss_pred             CCCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhh-hhhccccccccccccc
Confidence            45667789999999999  899999999999999999999987531           111121 11  0     244444


Q ss_pred             cC------------C--------CHHHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHH
Q 023708           69 DV------------T--------KEEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILH  127 (278)
Q Consensus        69 D~------------~--------~~~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~  127 (278)
                      |+            +        |.++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.++++
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence            43            3        366899999999999999999999999753 24678899999999999999999999


Q ss_pred             HHHHHHHHHHccCCCcEEEEecCchhhcCCCCC-chhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHH
Q 023708          128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAY  205 (278)
Q Consensus       128 l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~  205 (278)
                      ++++++|.|.+   .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|++.....
T Consensus       160 l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          160 LLQHFGPIMNE---GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             HHHHHSTTEEE---EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HHHHHHHHHhc---CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            99999999965   3899999999999888887 58999999999999999999985 8999999999999999865321


Q ss_pred             HhhhccCCCCH-HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          206 RKYLGKADMKP-EEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       206 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          ....... .........  ..|.+|+.+|+|+|++++||+++...++||++|.+|||+++
T Consensus       237 ----~~~~~~~~~~~~~~~~~--~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          237 ----KSGEKSFIDYAIDYSYN--NAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             ----CSSSSCHHHHHHHHHHH--HSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             ----ccccchhHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence                0000011 111111111  13678999999999999999999999999999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3e-42  Score=298.50  Aligned_cols=248  Identities=26%  Similarity=0.339  Sum_probs=209.1

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ...++++|++|||||++|||++++++|+++|++|++++|+.+...+..+++      ++.++.+|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999987766554432      36788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.++.+.++||++||..+..+.++...|+
T Consensus       100 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            9999999999999976 346778899999999999999999999999999998444468999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.+++.++.+++++||++++|+||.+.|+......    ..   ..........   ..|.+++++|+|+|+++
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~----~~---~~~~~~~~~~---~~p~~~~~~~~dva~~~  248 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL----DP---TGTFEKEMIG---RIPCGRLGTVEELANLA  248 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C----CT---TSHHHHHHHT---TCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc----cc---chhhHHHHHh---cCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999998322111    00   0111112222   23668899999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++|+++...+++|+.+++|||..+.
T Consensus       249 ~~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          249 AFLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHcCCcccccCCCEEEECCCeeec
Confidence            9999988889999999999998754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-42  Score=287.90  Aligned_cols=240  Identities=28%  Similarity=0.352  Sum_probs=206.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++. +..++.+|++|.++++++++    .++++|
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id   78 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVD   78 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCS
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH----HcCCCC
Confidence            4578999999999999999999999999999999999987776665543 46778999999999988876    568899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..+..+.++...|++||++++
T Consensus        79 ~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  157 (244)
T 1cyd_A           79 LLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT  157 (244)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            9999999763 457788999999999999999999999999999987543589999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      .+++.++.+++++||+++.|+||.+.|++.....        ..+.........   .|.+++.+|+|+|+++++++++.
T Consensus       158 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          158 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS--------ADPEFARKLKER---HPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT--------CCHHHHHHHHHH---STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCcccCccccccc--------cCHHHHHHHHhc---CCccCCCCHHHHHHHHHHHhCch
Confidence            9999999999989999999999999999865321        012222222222   25588999999999999999988


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ..+++|+.+.+|||+..
T Consensus       227 ~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          227 SASTSGGGILVDAGYLA  243 (244)
T ss_dssp             GTTCCSSEEEESTTGGG
T ss_pred             hhcccCCEEEECCCccC
Confidence            89999999999999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-43  Score=297.46  Aligned_cols=241  Identities=22%  Similarity=0.233  Sum_probs=194.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh-c
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW-K   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~-~   87 (278)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468899999999999999999999999999999999987776655443     3567899999999999999999886 8


Q ss_pred             CCccEEEECCc--cC----CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           88 GQLDIMFNNAG--IS----GSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        88 g~id~li~nag--~~----~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      |++|+||||||  +.    ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+. +..
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC-SSH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC-CCC
Confidence            99999999995  32    1235678888999999999999999999999999998755 6899999999987654 357


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++........      .. ........ ...|.+|..+|||+|
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~------~~-~~~~~~~~-~~~~~~~~~~pe~va  231 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE------EV-LQDPVLKQ-FKSAFSSAETTELSG  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------------------------CHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc------cc-cchhHHHH-HHhhhccCCCHHHHH
Confidence            89999999999999999999999999999999999999865432100      00 00000000 011345667999999


Q ss_pred             HHHHHhccCCC-CCceeeEEeecC
Q 023708          242 QAALFLASEEA-GFITAHNLVIDG  264 (278)
Q Consensus       242 ~~~~~l~s~~~-~~~tG~~i~~dg  264 (278)
                      ++++||+++.. .++||++|.+|+
T Consensus       232 ~~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          232 KCVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHHHHhcCcccccccceeechhh
Confidence            99999999876 489999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.2e-42  Score=290.55  Aligned_cols=227  Identities=22%  Similarity=0.216  Sum_probs=198.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999987776655432      3678899999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.++  .+++|+++|..+..+.++...|++||++
T Consensus        81 id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccc-cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCCCcchHHHHHHH
Confidence            99999999986 45688899999999999999999999999999999543  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +++|+++++.  ..+||++++|+||+++|++.....       ...              ...++.+|||+|++++||++
T Consensus       158 ~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~-------~~~--------------~~~~~~~p~dva~~v~~l~~  214 (235)
T 3l77_A          158 ARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKP-------GKP--------------KEKGYLKPDEIAEAVRCLLK  214 (235)
T ss_dssp             HHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCS-------CCC--------------GGGTCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhh--cCCCeEEEEEeCCccccccccccC-------Ccc--------------cccCCCCHHHHHHHHHHHHc
Confidence            9999999944  467999999999999999864321       000              11367899999999999999


Q ss_pred             CCCCCceeeEEeecCCccc
Q 023708          250 EEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++..+.+|+.+..|+|+..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~  233 (235)
T 3l77_A          215 LPKDVRVEELMLRSVYQRP  233 (235)
T ss_dssp             SCTTCCCCEEEECCTTSCC
T ss_pred             CCCCCccceEEEeecccCC
Confidence            9999999999999999854

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=298.47  Aligned_cols=248  Identities=27%  Similarity=0.351  Sum_probs=208.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----------CCeEEEecCCCHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----------GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~D~~~~~~i~~~~   80 (278)
                      +...|++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++          ++.++.+|++|.+++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            345789999999999999999999999999999999999987766554432          3678899999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      +++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.+.+++ .++||++||.. ..+.+..
T Consensus        92 ~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~  168 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFPLA  168 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCCcc
Confidence            99999999999999999975 445778899999999999999999999999999665533 58999999998 7788888


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      ..|+++|++++.+++.++.+++++||++++|+||.+.|++........      .+......   ....|.+++.+|+|+
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~---~~~~p~~~~~~~~dv  239 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSW------GQSFFEGS---FQKIPAKRIGVPEEV  239 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGG------GGGGGTTG---GGGSTTSSCBCTHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhcccc------chHHHHHH---HhcCcccCCCCHHHH
Confidence            999999999999999999999999999999999999999532111000      00101111   112366889999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccCc
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      |+++++|+++...+++|++|.+|||.++..
T Consensus       240 A~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          240 SSVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            999999999888999999999999987643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.2e-41  Score=285.83  Aligned_cols=236  Identities=32%  Similarity=0.453  Sum_probs=204.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh-----CCeE-EEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTI-----GGRY-IHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~-----~~~~-~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++     ++.+ +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 88877666554432     3556 889999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++
T Consensus        81 ~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            99999999986 345778899999999999999999999999999998755 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      ++.+++.++.|+.++||+++.|+||.+.|++....          .+.........   .|.+++.+|+|+|++++++++
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~~  225 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL----------PQEVKEAYLKQ---IPAGRFGRPEEVAEAVAFLVS  225 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----------CHHHHHHHHHT---CTTCSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc----------CHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999986431          22222222222   256889999999999999999


Q ss_pred             CCCCCceeeEEeecCCcc
Q 023708          250 EEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~  267 (278)
                      ++..+++|+.+.+|||++
T Consensus       226 ~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          226 EKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GGGTTCCSCEEEESTTCS
T ss_pred             cccccccCCEEEECCCCC
Confidence            888899999999999975

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.4e-42  Score=293.58  Aligned_cols=241  Identities=25%  Similarity=0.351  Sum_probs=206.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|++|||||++|||++++++|+++|++|++++|+ .+..+++.+++     ++.++.+|++|.++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999998 65555544332     36788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC----CCcEEEEecCchhhc-CCCCCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ----RKGSIICTSSSAAIM-GGLASHA  162 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~vsS~~~~~-~~~~~~~  162 (278)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++    ..++||++||..+.. +.++...
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  163 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGL  163 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHH
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchH
Confidence            99999999999743556788899999999999999999999999999997532    127999999999988 8888899


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |++||++++.+++.++.+++++||+++.|+||.+.|++....          .+........   ..|.+++.+|+|+|+
T Consensus       164 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~dva~  230 (258)
T 3afn_B          164 YGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK----------TQDVRDRISN---GIPMGRFGTAEEMAP  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC----------CHHHHHHHHT---TCTTCSCBCGGGTHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc----------CHHHHHHHhc---cCCCCcCCCHHHHHH
Confidence            999999999999999999999999999999999999986421          1222222222   235688999999999


Q ss_pred             HHHHhccCCCC-CceeeEEeecCCcc
Q 023708          243 AALFLASEEAG-FITAHNLVIDGGYT  267 (278)
Q Consensus       243 ~~~~l~s~~~~-~~tG~~i~~dgG~~  267 (278)
                      ++++++++... +++|+++++|||++
T Consensus       231 ~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          231 AFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHHHhCcchhccccCCEEeECCCcc
Confidence            99999987766 89999999999985

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.6e-43  Score=307.70  Aligned_cols=252  Identities=21%  Similarity=0.201  Sum_probs=171.5

Q ss_pred             cccCCCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecch-----------HHHHH-----------HHhhhC---
Q 023708           10 LSSKRLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILD-----------ELGAA-----------LASTIG---   62 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~-----------~~~~~-----------~~~~~~---   62 (278)
                      |+.++|++|++|||||  ++|||+++|++|+++|++|++++|++           +.+++           +.+++.   
T Consensus         2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred             CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence            3455789999999999  89999999999999999999998753           11111           111110   


Q ss_pred             -----CeEEEecC------------CC--------HHHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHH
Q 023708           63 -----GRYIHCDV------------TK--------EEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKF  116 (278)
Q Consensus        63 -----~~~~~~D~------------~~--------~~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~  116 (278)
                           ..++.+|+            +|        .++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~  161 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA  161 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence                 24444442            22        45899999999999999999999999753 346788999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC-chhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCC
Q 023708          117 LLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAYSLSKEAIIGLARSTACELGK-HGIRVNCISPH  194 (278)
Q Consensus       117 ~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG  194 (278)
                      .+++|+.++++++++++|.|.+   .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||
T Consensus       162 ~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          162 AVSSSSYSFVSLLQHFLPLMKE---GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHhHhhHHHHHHHHHHHHHHhc---CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            9999999999999999999965   3899999999999888887 68999999999999999999985 89999999999


Q ss_pred             CCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       195 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++|++........  .... .+......  ....|.+|+.+|||+|++++||+++...++||++|.+|||+++.
T Consensus       239 ~v~T~~~~~~~~~~--~~~~-~~~~~~~~--~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          239 PLKSRAASAIGKAG--DKTF-IDLAIDYS--EANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             CCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             CccChhhhhccccc--chhh-HHHHHHHH--hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            99999865421000  0000 00000111  11236789999999999999999999999999999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.9e-42  Score=324.68  Aligned_cols=231  Identities=29%  Similarity=0.413  Sum_probs=196.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch---------HHHHHHHhhh---CCeEEEecCCCHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD---------ELGAALASTI---GGRYIHCDVTKEEDVES   78 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~---------~~~~~~~~~~---~~~~~~~D~~~~~~i~~   78 (278)
                      +..++++|++|||||++|||+++|++|+++|++|++++|..         +..+++.+++   +.. ..+|++|.+++++
T Consensus         2 ~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~   80 (604)
T 2et6_A            2 SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDK   80 (604)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHH
Confidence            34568899999999999999999999999999999987653         3344433332   222 3479999888999


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC
Q 023708           79 AVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL  158 (278)
Q Consensus        79 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~  158 (278)
                      +++++.+.||+||+||||||+. ...++.+.+.++|++.|++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence            9999999999999999999986 446789999999999999999999999999999998865 69999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (278)
                      +...|++||+|+.+|+++++.|++++||+||+|+|| +.|+|.....         +++ .            .+..+||
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~---------~~~-~------------~~~~~pe  215 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM---------PPP-M------------LEKLGPE  215 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS---------CHH-H------------HTTCSHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC---------Chh-h------------hccCCHH
Confidence            999999999999999999999999999999999998 6888754211         111 0            1135899


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|..++||+++. .++||++|.+|||+..
T Consensus       216 ~vA~~v~~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          216 KVAPLVLYLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHHHHHHHHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHHHHHHHHhCCc-ccCCCCEEEECCCeEE
Confidence            9999999999988 9999999999999753

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=289.93  Aligned_cols=250  Identities=29%  Similarity=0.385  Sum_probs=208.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++     ++.++.+|++|.++++++++++.+
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999998 666555544332     356789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~  164 (278)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++++++++++.|.+   .++||++||..+. .+.++...|+
T Consensus        96 ~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~Y~  171 (274)
T 1ja9_A           96 HFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYA  171 (274)
T ss_dssp             HHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCSCCSCHHHH
T ss_pred             HcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhccCCCCCCchHH
Confidence            999999999999986 3457788999999999999999999999999999873   3899999999998 7888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccC--CCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA--DMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      +||++++.+++.++.+++++||+++.++||.+.|++............  ....++.......  ..|.+++++|+|+|+
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~  249 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN--MNPLKRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH--TSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh--cCCCCCccCHHHHHH
Confidence            999999999999999999999999999999999998765332211100  1221222222221  125688999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++|+++...+++|+.+++|||+.
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCcccccccCcEEEecCCcC
Confidence            9999999888899999999999963

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.1e-42  Score=293.76  Aligned_cols=226  Identities=17%  Similarity=0.176  Sum_probs=197.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..+..+|++|||||++|||+++|++|+++|++|++++|+.+..       ....+.+|++|.++++++++++.+.+|++|
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD   89 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------ADHSFTIKDSGEEEIKSVIEKINSKSIKVD   89 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------SSEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------cccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence            3455689999999999999999999999999999999986532       224678999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++...|++||++++
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTSGMIAYGATKAATH  166 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence            99999998755444778889999999999999999999999999865   479999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      .|++.++.|++  ++||++++|+||+++|++......                     ..+.+++.+|+|+|+++++|++
T Consensus       167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~---------------------~~~~~~~~~~~dva~~i~~l~~  225 (251)
T 3orf_A          167 HIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS---------------------DANFDDWTPLSEVAEKLFEWST  225 (251)
T ss_dssp             HHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT---------------------TSCGGGSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc---------------------cccccccCCHHHHHHHHHHHhc
Confidence            99999999987  889999999999999998754321                     1134678899999999999999


Q ss_pred             C-CCCCceeeEEeecCCccc
Q 023708          250 E-EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       250 ~-~~~~~tG~~i~~dgG~~~  268 (278)
                      + ...+++|+++.+++|...
T Consensus       226 ~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          226 NSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             CGGGCCCTTCEEEEEEETTE
T ss_pred             CccccCCcceEEEEecCCcc
Confidence            8 889999999999988653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.2e-41  Score=283.64  Aligned_cols=222  Identities=21%  Similarity=0.256  Sum_probs=185.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      |++|||||++|||++++++|+++|++|++++|+++..+++.+.+  ++.++.+|+++.++++++++++.+.   .|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI---PSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCEEEE
Confidence            68999999999999999999999999999999998888877664  3678999999999999998876543   499999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      |||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++  ++||++||..+..+.++...|++||++++.|++
T Consensus        79 ~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           79 SAGSG-YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCC-CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             eCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCCCCCCchhHHHHHHHHHHHH
Confidence            99986 456888999999999999999999999999999998754  499999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc-CCCCC
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS-EEAGF  254 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s-~~~~~  254 (278)
                      .++.|++++||+||+|+||+++|++......                     ..+.+++.+|+|+|++++++++ +...+
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------------------~~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMATEFWETSGK---------------------SLDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC-------------------------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHhcCeEEEEEECCcccChHHHhcCC---------------------CCCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            9999999999999999999999998654321                     0134788999999999999987 77889


Q ss_pred             ceeeEEeecCCc
Q 023708          255 ITAHNLVIDGGY  266 (278)
Q Consensus       255 ~tG~~i~~dgG~  266 (278)
                      +||+++..+...
T Consensus       215 itg~~~~~~~~~  226 (230)
T 3guy_A          215 VSDITVNREGHH  226 (230)
T ss_dssp             EEEEEEEC----
T ss_pred             ccceeecCCCCC
Confidence            999999988653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=4.9e-42  Score=296.69  Aligned_cols=243  Identities=23%  Similarity=0.193  Sum_probs=196.3

Q ss_pred             cCCCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHH-----------HHHHhhhC-------CeEEEec--
Q 023708           12 SKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELG-----------AALASTIG-------GRYIHCD--   69 (278)
Q Consensus        12 ~~~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~-----------~~~~~~~~-------~~~~~~D--   69 (278)
                      .++|++|++|||||+  +|||+++|++|+++|++|++++|++...           +++ +++.       ...+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            346889999999999  9999999999999999999998753211           111 1110       1233343  


Q ss_pred             ------CC----C--------HHHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHH
Q 023708           70 ------VT----K--------EEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIK  130 (278)
Q Consensus        70 ------~~----~--------~~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  130 (278)
                            ++    |        +++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.+++++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  32    2        66899999999999999999999999753 24678899999999999999999999999


Q ss_pred             HHHHHHHccCCCcEEEEecCchhhcCCCCC-chhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHHHHhh
Q 023708          131 HAAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNAYRKY  208 (278)
Q Consensus       131 ~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~  208 (278)
                      +++|.|.+   .|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|++.....   
T Consensus       162 ~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~---  235 (297)
T 1d7o_A          162 HFLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG---  235 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS---
T ss_pred             HHHHHhcc---CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc---
Confidence            99999965   4799999999999988887 69999999999999999999985 7999999999999999854210   


Q ss_pred             hccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                           ..++........   .|.+|+.+|+|+|++++||+++...++||++|.+|||+++.
T Consensus       236 -----~~~~~~~~~~~~---~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          236 -----FIDTMIEYSYNN---APIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             -----HHHHHHHHHHHH---SSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             -----ccHHHHHHhhcc---CCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence                 001111111122   26689999999999999999998999999999999998864

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.8e-41  Score=291.06  Aligned_cols=235  Identities=26%  Similarity=0.401  Sum_probs=193.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.+|
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            588999999999999999999999999999999999988877765543     367889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++...|++||+
T Consensus       108 ~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  186 (301)
T 3tjr_A          108 GVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY  186 (301)
T ss_dssp             SCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence            999999999987 4468889999999999999999999999999999988654689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.|+++++.|+++.||+|++|+||+++|++.....................+ ...  ....+..+|+|+|+.++.++
T Consensus       187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~pedvA~~i~~~l  263 (301)
T 3tjr_A          187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAF-GPL--PTQDESVSADDVARLTADAI  263 (301)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhc-ccc--ccccCCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999998764321110000000000000 000  01245789999999999998


Q ss_pred             cCCC
Q 023708          249 SEEA  252 (278)
Q Consensus       249 s~~~  252 (278)
                      ....
T Consensus       264 ~~~~  267 (301)
T 3tjr_A          264 LANR  267 (301)
T ss_dssp             HHTC
T ss_pred             hcCC
Confidence            6553

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-40  Score=279.29  Aligned_cols=229  Identities=22%  Similarity=0.244  Sum_probs=203.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-------HIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+..+.+.+++     ++.++.+|++|.++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            368999999999999999999999999       9999999987776665443     2568899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchh
Confidence            99999999999999986 446788899999999999999999999999999998755 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||++++.+++.++.+++++||+++.|+||.+.|++....          ....            ..++.+|+|+|++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~------------~~~~~~~~dva~~  216 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----------DDEM------------QALMMMPEDIAAP  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----------CSTT------------GGGSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc----------cccc------------cccCCCHHHHHHH
Confidence            99999999999999999999999999999999999985321          0000            0257899999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++++++..+++|+.+..|||+.+
T Consensus       217 ~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          217 VVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHhCCccccchheEEecccccc
Confidence            9999999999999999999999876

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.2e-42  Score=290.21  Aligned_cols=223  Identities=13%  Similarity=0.120  Sum_probs=195.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~   92 (278)
                      .++|++|||||++|||++++++|+++|++|++++|+.+...   .  ...++.+|++|.++++++++++.+.+  |++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---S--ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---S--EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---C--CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            46899999999999999999999999999999999865422   1  23567899999999999999999999  79999


Q ss_pred             EEECCccCCCCCCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSI-TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ||||||+.. ..++ .+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++...|++||++++
T Consensus        80 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  155 (241)
T 1dhr_A           80 ILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  155 (241)
T ss_dssp             EEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCCCchHHHHHHHHHH
Confidence            999999864 3566 78888999999999999999999999999965   479999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      .|+++++.|++  ++||++|+|+||+++|++......         ..            ...+..+|+|+|+.++++++
T Consensus       156 ~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~------------~~~~~~~~~~vA~~v~~l~~  214 (241)
T 1dhr_A          156 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP---------EA------------DFSSWTPLEFLVETFHDWIT  214 (241)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST---------TS------------CGGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc---------ch------------hhccCCCHHHHHHHHHHHhc
Confidence            99999999999  899999999999999998654210         00            01234679999999999999


Q ss_pred             CCCCCceeeEEeecCCcc
Q 023708          250 EEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~  267 (278)
                      +...+++|+.+.+|||..
T Consensus       215 ~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          215 GNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTTCCCTTCEEEEEEETT
T ss_pred             CCCcCccceEEEEeCCCC
Confidence            999999999999999876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5e-41  Score=315.15  Aligned_cols=227  Identities=30%  Similarity=0.456  Sum_probs=190.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--HHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD--ELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+|++|++|||||++|||+++|++|+++|++|+++++..  +..+++.+ .+  +..+.+|++  ++.+++++++.+++|
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G  394 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-AGGEAWPDQHDVA--KDSEAIIKNVIDKYG  394 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCEEEEECCCHH--HHHHHHHHHHHHHHS
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-cCCeEEEEEcChH--HHHHHHHHHHHHhcC
Confidence            368899999999999999999999999999999988532  22233322 22  344556763  556788999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      +||+||||||+. ...++.+++.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++||+
T Consensus       395 ~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          395 TIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             CCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHHHH
Confidence            999999999986 346789999999999999999999999999999998765 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      |+.+|+++++.|++++||+||+|+||. .|+|.....          +++            ..+..+|+|+|+.++||+
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~----------~~~------------~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIM----------REQ------------DKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------------------CCSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccC----------chh------------hccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999995 999864321          000            023469999999999999


Q ss_pred             cCCCCCceeeEEeecCCccc
Q 023708          249 SEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++.+. +||++|.+|||+..
T Consensus       530 s~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          530 TDDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             STTCC-CCSCEEEEETTEEE
T ss_pred             CCccC-CCCcEEEECCCeeE
Confidence            99888 99999999999864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-42  Score=287.55  Aligned_cols=223  Identities=17%  Similarity=0.171  Sum_probs=193.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~   92 (278)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...   +  ...++.+|++|.++++++++++.+.+  +++|+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---D--SNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---S--EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---c--ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            46799999999999999999999999999999999865422   1  23567899999999999999999998  79999


Q ss_pred             EEECCccCCCCCCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSI-TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ||||||+.. ..++ .+.+.++|++.+++|+.+++.++++++|.|.+   .++||++||..+..+.++...|++||++++
T Consensus        76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  151 (236)
T 1ooe_A           76 VFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH  151 (236)
T ss_dssp             EEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence            999999864 3566 77888999999999999999999999999965   479999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH-Hhc
Q 023708          172 GLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL-FLA  248 (278)
Q Consensus       172 ~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~-~l~  248 (278)
                      +|+++++.|++  ++||++++|+||+++|++......         ..            ...+..+|+|+|++++ +|+
T Consensus       152 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~------------~~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          152 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP---------NA------------DHSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST---------TC------------CGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC---------Cc------------cccccCCHHHHHHHHHHHHc
Confidence            99999999998  899999999999999998654210         00            1134568999999998 555


Q ss_pred             cCCCCCceeeEEeecCCcc
Q 023708          249 SEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++...+++|+.|.+|||..
T Consensus       211 s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             CGGGCCCTTCEEEEEEETT
T ss_pred             CCCcccccccEEEEecCCC
Confidence            8889999999999999975

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.8e-41  Score=288.84  Aligned_cols=244  Identities=21%  Similarity=0.241  Sum_probs=195.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++|++|||||++|||++++++|+++|++|++++|+.+...++.+..  ++.++.+|++|.++++++++++.+.+|++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            56899999999999999999999999999999999987777766553  3678899999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||++++.
T Consensus        83 lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (281)
T 3m1a_A           83 LVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQ  160 (281)
T ss_dssp             EEECCCCE-EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHHHHHHH
Confidence            99999986 345788999999999999999999999999999998765 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC-HHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK-PEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++.++.|++++||++++|+||+++|++....... ....... ..............+.+++.+|+|+|++++++++++
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          161 LSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAY-FSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEE-ECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhhccCcEEEEEecCccccccccccccc-cCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999986421100 0000000 011111111111235678999999999999999765


Q ss_pred             CCCceeeEEeecC
Q 023708          252 AGFITAHNLVIDG  264 (278)
Q Consensus       252 ~~~~tG~~i~~dg  264 (278)
                      .   .+..+.+.+
T Consensus       240 ~---~~~~~~l~s  249 (281)
T 3m1a_A          240 K---TPLRLALGG  249 (281)
T ss_dssp             S---CCSEEEESH
T ss_pred             C---CCeEEecCc
Confidence            3   334444433

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=4.5e-40  Score=274.72  Aligned_cols=226  Identities=29%  Similarity=0.365  Sum_probs=190.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+|++|||||++|||++++++|+++|++|++++|+.+..+++.+++ ++.++.+|++|.++++++++++.+.++++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999999988777766554 477899999999999999999999999999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|++++.++
T Consensus        84 ~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  161 (234)
T 2ehd_A           84 NNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLA  161 (234)
T ss_dssp             ECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHHHHHHHHH
Confidence            999986 446788899999999999999999999999999998755 689999999999999899999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      +.++.|++++||+++.|+||+++|++....           +..    .         ...+|+|+|++++++++++..+
T Consensus       162 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~----~---------~~~~~~dvA~~~~~l~~~~~~~  217 (234)
T 2ehd_A          162 GAAMLDLREANVRVVNVLPGSVDTGFAGNT-----------PGQ----A---------WKLKPEDVAQAVLFALEMPGHA  217 (234)
T ss_dssp             HHHHHHHGGGTEEEEEEECC----------------------------------------CCHHHHHHHHHHHHHSCCSS
T ss_pred             HHHHHHHhhcCcEEEEEEeCCCcCCccccc-----------ccc----c---------CCCCHHHHHHHHHHHhCCCccc
Confidence            999999999999999999999999875421           000    0         0359999999999999999999


Q ss_pred             ceeeEEeecCCcc
Q 023708          255 ITAHNLVIDGGYT  267 (278)
Q Consensus       255 ~tG~~i~~dgG~~  267 (278)
                      ++|+.+..++...
T Consensus       218 ~~g~~~~~~~~~~  230 (234)
T 2ehd_A          218 MVSEIELRPTRPT  230 (234)
T ss_dssp             CCCEEECCC----
T ss_pred             ccceEEEeecCCC
Confidence            9999887766543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.7e-41  Score=293.14  Aligned_cols=230  Identities=29%  Similarity=0.387  Sum_probs=195.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe---------cchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD---------ILDELGAALASTIG--GRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~---------r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~   81 (278)
                      ++|++|++|||||++|||++++++|+++|++|++++         |+.+..+++.+++.  .....+|+++.++++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            468899999999999999999999999999999964         45555555444331  1234689999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           82 LAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|+..+++|+.++++++++++|.|++++ .++||++||..+..+.++..
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~~~~  162 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQA  162 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCCH
Confidence            99999999999999999863 35678899999999999999999999999999998765 68999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      .|++||++++.|++.++.|++++||++|+|+||.+ |++.....         + ....            +..+|+|+|
T Consensus       163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~---------~-~~~~------------~~~~p~dvA  219 (319)
T 1gz6_A          163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM---------P-EDLV------------EALKPEYVA  219 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS---------C-HHHH------------HHSCGGGTH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC---------C-hhhh------------ccCCHHHHH
Confidence            99999999999999999999999999999999998 77643211         1 1110            134899999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCccc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.++||+++ ..+++|+.|.+|||+..
T Consensus       220 ~~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          220 PLVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHHHHhCc-hhhcCCCEEEECCCeEE
Confidence            999999987 45899999999999764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.3e-41  Score=293.17  Aligned_cols=229  Identities=22%  Similarity=0.193  Sum_probs=187.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++++  +.++.+|++|.++++++++++    ++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~   86 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SG   86 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CC
Confidence            457899999999999999999999999999999999999988888776654  678899999999999998865    78


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-------------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-------------  156 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------  156 (278)
                      +|+||||||+..   +..+.+.++|++.+++|+.++++++++++|.|.+     +||++||..+..+             
T Consensus        87 iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~~~~~~~~~  158 (291)
T 3rd5_A           87 ADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLEDLNWRSRR  158 (291)
T ss_dssp             EEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSSCTTCSSSC
T ss_pred             CCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCcccccccccC
Confidence            999999999863   3356788999999999999999999999999853     8999999998765             


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCC--cEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHG--IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                      .++...|++||++++.|++.++.|++++|  |++++|+||+++|++.....           +.......   ..+.++.
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~-----------~~~~~~~~---~~~~~~~  224 (291)
T 3rd5_A          159 YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-----------RKLGDALM---SAATRVV  224 (291)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------------------
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc-----------hHHHHHHH---HHHHHHH
Confidence            34456899999999999999999998877  99999999999999876532           11111111   1244556


Q ss_pred             CC-HHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          235 AS-IEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~-~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .. |+|+|++++||+++  ++++|+.|.+|||+.-
T Consensus       225 ~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          225 ATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             hCCHHHHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence            65 99999999999987  4899999999999874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-40  Score=279.87  Aligned_cols=239  Identities=26%  Similarity=0.312  Sum_probs=198.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++       .+.++.+|++|.++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987766654432       256788999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCC-CcEEEEecCchhh--cCCCCCch
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQR-KGSIICTSSSAAI--MGGLASHA  162 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~--~~~~~~~~  162 (278)
                      .++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+. .++||++||..+.  .+.++...
T Consensus       108 ~~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          108 QHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             HHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            999999999999986 3457788899999999999999999999999999987542 3899999999988  56677789


Q ss_pred             hhhhHHHHHHHHHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          163 YSLSKEAIIGLARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      |+++|++++.|++.++.|++  +.+|+++.|+||++.|++......       ..++....   ..   +..++.+|+|+
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~---~~---~~~~~~~~~dv  253 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-------KDPEKAAA---TY---EQMKCLKPEDV  253 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-------TCHHHHHH---HH---C---CBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-------cChhHHhh---hc---ccccCCCHHHH
Confidence            99999999999999999998  889999999999999998643321       01222111   11   23568899999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCC
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      |++++++++++..+.+|+....++|
T Consensus       254 A~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          254 AEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHhcCCcceEeeeEEEccCC
Confidence            9999999998888888865555544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-40  Score=275.65  Aligned_cols=229  Identities=29%  Similarity=0.390  Sum_probs=194.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .      .++.++.+|++|.++++++++++ +.++++|+||||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEc
Confidence            689999999999999999999999999999999865 1      13478999999999999999999 888999999999


Q ss_pred             CccCCCCCCcccC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-----CCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           97 AGISGSGGSITSL----NMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-----RKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        97 ag~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      ||.... .++.+.    +.++|++.+++|+.+++.+++++++.|.+++     ..++||++||..+..+.++...|++||
T Consensus        74 ag~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (242)
T 1uay_A           74 AGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASK  152 (242)
T ss_dssp             CCCCCC-CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccCc-ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHH
Confidence            997643 344443    4559999999999999999999999998743     135999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC-CCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edva~~~~~  246 (278)
                      ++++.+++.++.|++++||+++.|+||.+.|++....          .+ ........  ..|. +++.+|+|+|+++++
T Consensus       153 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~-~~~~~~~~--~~~~~~~~~~~~dva~~~~~  219 (242)
T 1uay_A          153 GGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL----------PE-KAKASLAA--QVPFPPRLGRPEEYAALVLH  219 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS----------CH-HHHHHHHT--TCCSSCSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc----------ch-hHHHHHHh--hCCCcccCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999986531          11 11112221  2355 789999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++++  .+++|++|.+|||+++.
T Consensus       220 l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          220 ILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHC--TTCCSCEEEESTTCCCC
T ss_pred             HhcC--CCCCCcEEEEcCCeecC
Confidence            9986  78999999999999754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=4.8e-40  Score=286.92  Aligned_cols=239  Identities=23%  Similarity=0.288  Sum_probs=187.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+       .+.++.+|++|.++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988777665443       46788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecCchhhcCCCC
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~~  159 (278)
                      +.+|++|+||||||+. ...++.+.+.++|++.+++|+.|+++++++++|.|.++     .+.|+||++||..+..+.++
T Consensus        83 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHTCCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            9999999999999986 45688999999999999999999999999999999864     23689999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|++||+|+++|++.++.|+.++||++++|+||+++|++............................ ......+|+|
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pe~  240 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAG-VHEFGMEPDV  240 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CC-GGGSSBCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHH-hhhcCCCHHH
Confidence            999999999999999999999999999999999999999987643210000000000000000111110 0112269999


Q ss_pred             HHHHHHHhccCCC
Q 023708          240 VAQAALFLASEEA  252 (278)
Q Consensus       240 va~~~~~l~s~~~  252 (278)
                      +|+.++.++....
T Consensus       241 vA~~~~~al~~~~  253 (319)
T 3ioy_A          241 IGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999986553

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=283.39  Aligned_cols=241  Identities=27%  Similarity=0.358  Sum_probs=194.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++|++|||||++|||++++++|+++|++|++++|+.+...+..+.+       ++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999877665544332       25678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchhhh
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      |++|+||||||...         .++|++.+++|+.+++.+++.++|.|.+++  +.++||++||..+..+.++...|++
T Consensus        85 g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence            99999999999752         257899999999999999999999997642  2589999999999999999999999


Q ss_pred             hHHHHHHHHHHH--HHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          166 SKEAIIGLARST--ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       166 sK~a~~~l~~~l--~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ||++++.+++++  +.|++++||++|+|+||+++|++.......... .  ...........  +.+..++++|+|+|++
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~~~dvA~~  230 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENM-G--QYIEYKDHIKD--MIKYYGILDPPLIANG  230 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHH-G--GGGGGHHHHHH--HHHHHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccccccc-c--hhhhHHHHHHH--HhccccCCCHHHHHHH
Confidence            999999999995  688999999999999999999986532100000 0  00000000000  0122357799999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      ++||++++  +++|++|.+|||......
T Consensus       231 v~~l~s~~--~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          231 LITLIEDD--ALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             HHHHHHCT--TCSSCEEEEETTTEEEEC
T ss_pred             HHHHhcCc--CCCCcEEEecCCCccccc
Confidence            99999865  599999999999865433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=4.2e-41  Score=316.65  Aligned_cols=234  Identities=28%  Similarity=0.372  Sum_probs=183.2

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec---------chHHHHHHHhhhC--CeEEEecCCCHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI---------LDELGAALASTIG--GRYIHCDVTKEEDVES   78 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~   78 (278)
                      ....+++||++|||||++|||+++|++|+++|++|++++|         +.+..+.+.+++.  .....+|++|.+++++
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~   91 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAK   91 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence            3456889999999999999999999999999999999887         4444444443321  1234589999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC
Q 023708           79 AVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL  158 (278)
Q Consensus        79 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~  158 (278)
                      +++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.++..+.+
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHC----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence            9999999999999999999987 446788999999999999999999999999999999865 79999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIE  238 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  238 (278)
                      +...|++||+|+++|+++++.|++++||+||+|+||.+ |++....          .+...            .+..+|+
T Consensus       170 ~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~----------~~~~~------------~~~~~pe  226 (613)
T 3oml_A          170 GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI----------LPDIL------------FNELKPK  226 (613)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC----------CCHHH------------HTTCCGG
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc----------cchhh------------hhcCCHH
Confidence            99999999999999999999999999999999999974 4443221          11111            2245899


Q ss_pred             HHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          239 DVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       239 dva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+|++++||+++. .++||++|.+|||++..
T Consensus       227 dvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          227 LIAPVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             GTHHHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence            9999999999988 89999999999998854

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-40  Score=276.36  Aligned_cols=224  Identities=20%  Similarity=0.205  Sum_probs=190.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcC--
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALAST--IGGRYIHCDVTKEEDVESAVRLAVSWKG--   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g--   88 (278)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+.  .++.++.+|++|.++++++++++.+.+|  
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            467999999999999999999999999  9999999987766555432  2467889999999999999999999998  


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc------CC----CcEEEEecCchhhcCC-
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG------QR----KGSIICTSSSAAIMGG-  157 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~----~~~iv~vsS~~~~~~~-  157 (278)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.++      +.    .++||++||..+..+. 
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            999999999987535678889999999999999999999999999999764      21    5799999999988776 


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          158 ------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       158 ------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                            ++...|++||++++.+++.++.+++++||+++.|+||.++|++...                            
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------------  212 (250)
T 1yo6_A          161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------------  212 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred             ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------------
Confidence                  5778999999999999999999999999999999999999997531                            


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      .+..+|+|+|+.+++++++...+++|+.+.+|||.
T Consensus       213 ~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          213 NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ------HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            12568999999999999988888999999999985

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=6.7e-41  Score=294.78  Aligned_cols=240  Identities=12%  Similarity=-0.014  Sum_probs=195.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHH---------------HHHHHhhh--CCeEEEecCCCHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDEL---------------GAALASTI--GGRYIHCDVTKEEDV   76 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~---------------~~~~~~~~--~~~~~~~D~~~~~~i   76 (278)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+.               ..+..+..  .+..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3589999999999999999999999 99999998875322               12122222  356789999999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCC------------CCCCc---------------------ccCCHHHHHHHHHHHhH
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISG------------SGGSI---------------------TSLNMEDVKFLLSVNLN  123 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~------------~~~~~---------------------~~~~~~~~~~~~~~N~~  123 (278)
                      +++++++.+.+|++|+||||||...            ..+++                     .+.+.++|++.+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            9999999999999999999999741            22444                     77899999999999999


Q ss_pred             HHH-HHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC--chhhhhHHHHHHHHHHHHHHHCCC-CcEEEEecCCCCCCh
Q 023708          124 GIL-HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS--HAYSLSKEAIIGLARSTACELGKH-GIRVNCISPHGVPSE  199 (278)
Q Consensus       124 ~~~-~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~l~~~l~~e~~~~-~i~v~~v~pG~v~t~  199 (278)
                      +.| .+++++.+.+...+ .|+||++||+.+..+.+..  ..|++||+++++|+++++.||+++ |||||+|+||.+.|+
T Consensus       205 ~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 78888876533333 5899999999999998877  899999999999999999999999 999999999999999


Q ss_pred             hhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          200 MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      +.....         ...........    +++|.++||||++++.||+++   +++|+.+.+|++..+-..
T Consensus       284 ~s~~ip---------~~p~y~~~l~~----~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d  339 (405)
T 3zu3_A          284 ASSAIP---------MMPLYLSLLFK----VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRAD  339 (405)
T ss_dssp             HHHTST---------THHHHHHHHHH----HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECC
T ss_pred             hhhcCC---------CCcHHHHHHHH----HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCc
Confidence            865321         11112222222    458899999999999999987   688999999998775443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=6e-40  Score=277.39  Aligned_cols=232  Identities=18%  Similarity=0.205  Sum_probs=190.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecch--HHHHHHHhhh---CCeEEEecCCCH-HHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAH-IVIADILD--ELGAALASTI---GGRYIHCDVTKE-EDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~--~~~~~~~~~~---~~~~~~~D~~~~-~~i~~~~~~~~~~   86 (278)
                      +|++|++|||||++|||++++++|+++|++ |++++|+.  +..+++.+..   ++.++.+|++|. ++++++++++.+.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            578999999999999999999999999997 99999875  3444444432   356789999998 9999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      ++++|+||||||+.         +.++|++.+++|+.++++++++++|.|.+++  ..++||++||..+..+.++...|+
T Consensus        82 ~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  152 (254)
T 1sby_A           82 LKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             cCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHH
Confidence            99999999999974         2367899999999999999999999997642  148999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||++++.|+++++.+++++||++++|+||+++|++...... .. .  .. +........      ....+|||+|+.+
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~--~~-~~~~~~~~~------~~~~~~~dvA~~i  221 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WL-D--VE-PRVAELLLS------HPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GG-G--SC-TTHHHHHTT------SCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccch-hh-h--hh-HHHHHHHhc------CCCCCHHHHHHHH
Confidence            999999999999999998789999999999999998653110 00 0  01 111222211      1244899999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++   .+.+|+.+.+|||+..
T Consensus       222 ~~~~~---~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          222 VKAIE---ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HHHHH---HCCTTCEEEEETTEEE
T ss_pred             HHHHH---cCCCCCEEEEeCCcee
Confidence            99996   4689999999999753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-39  Score=273.93  Aligned_cols=229  Identities=20%  Similarity=0.172  Sum_probs=195.5

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcC---CeEEEEecchHHHHHH---Hhh-hCCeEEEecCCCHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENG---AHIVIADILDELGAAL---AST-IGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g---~~Vi~~~r~~~~~~~~---~~~-~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ....++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+   .+. .++.++.+|++|.+++++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence            33557889999999999999999999999999   9999999986543332   221 2467889999999999999999


Q ss_pred             HHhhcC--CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc------CC----CcEEEEecC
Q 023708           83 AVSWKG--QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG------QR----KGSIICTSS  150 (278)
Q Consensus        83 ~~~~~g--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~----~~~iv~vsS  150 (278)
                      +.+.++  ++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.++      +.    .++||++||
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence            999998  899999999987535678899999999999999999999999999999864      21    479999999


Q ss_pred             chhhcCCC---CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC
Q 023708          151 SAAIMGGL---ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG  227 (278)
Q Consensus       151 ~~~~~~~~---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                      ..+..+.+   +...|++||++++.|++.++.+++++||++++|+||+++|++...                        
T Consensus       174 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  229 (267)
T 1sny_A          174 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------  229 (267)
T ss_dssp             GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------
Confidence            99887653   677899999999999999999999999999999999999997521                        


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          228 SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       228 ~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                          .+..+|+++|+.++++++....+.+|+.+.+|||.
T Consensus       230 ----~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          230 ----SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             ----TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             ----CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence                13568999999999999988889999999999985

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.1e-40  Score=282.17  Aligned_cols=221  Identities=26%  Similarity=0.330  Sum_probs=173.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |++|||||++|||++++++|+++|++|++++|+++..+.       . +.+|++|.++++++++++   ++++|+|||||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~~A   70 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKC---SKGMDGLVLCA   70 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHh---CCCCCEEEECC
Confidence            689999999999999999999999999999998643211       1 568999999988887632   38999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-----------------------
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-----------------------  154 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----------------------  154 (278)
                      |+....        +.|++.+++|+.++++++++++|.|.+++ .++||++||..+.                       
T Consensus        71 g~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           71 GLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            975312        23899999999999999999999998755 6899999999988                       


Q ss_pred             -----cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC
Q 023708          155 -----MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL  229 (278)
Q Consensus       155 -----~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (278)
                           .+.++...|++||++++.+++.++.|++++||++++|+||.++|++......         ........... ..
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~-~~  211 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ---------DPRYGESIAKF-VP  211 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------------C-CC
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc---------chhHHHHHHhc-cc
Confidence                 3444677899999999999999999999999999999999999998754311         00011111111 23


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |.+++.+|+|+|+++++|++++..+++|+.+.+|||++.
T Consensus       212 ~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             ccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            668899999999999999998889999999999999864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.1e-40  Score=296.05  Aligned_cols=238  Identities=15%  Similarity=0.040  Sum_probs=191.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHH---------------HHHHhhh--CCeEEEecCCCHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELG---------------AALASTI--GGRYIHCDVTKEEDVE   77 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~---------------~~~~~~~--~~~~~~~D~~~~~~i~   77 (278)
                      .+|++||||||+|||+++|+.|++ .|++|++++|+.+..               .+..+..  .+..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 999999998764321               1222222  2567899999999999


Q ss_pred             HHHHHHHhhc-CCccEEEECCccC------------CCCCCc---------------------ccCCHHHHHHHHHHHhH
Q 023708           78 SAVRLAVSWK-GQLDIMFNNAGIS------------GSGGSI---------------------TSLNMEDVKFLLSVNLN  123 (278)
Q Consensus        78 ~~~~~~~~~~-g~id~li~nag~~------------~~~~~~---------------------~~~~~~~~~~~~~~N~~  123 (278)
                      ++++++.+.+ |+||+||||||..            ...+++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972            122344                     36799999999999999


Q ss_pred             HHH-HHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC--chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChh
Q 023708          124 GIL-HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS--HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM  200 (278)
Q Consensus       124 ~~~-~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~  200 (278)
                      +.| .+++++.+.+...+ .|+||++||..+..+.+..  ..|++||+++.+|+++|+.|++++|||||+|+||.+.|++
T Consensus       220 ~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD-GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            987 88888876543333 5899999999998887765  8999999999999999999999999999999999999998


Q ss_pred             hHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCce-eeEEeecCCccc
Q 023708          201 LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFIT-AHNLVIDGGYTT  268 (278)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~t-G~~i~~dgG~~~  268 (278)
                      .....         ...........    |++|.++||||++++.||+++.- |.+ |+...+|++..+
T Consensus       299 ~~~ip---------~~~~~~~~~~~----~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          299 SAAIP---------VMPLYISMVYK----IMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             GGGST---------HHHHHHHHHHH----HHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             hhcCC---------CChHHHHHHHh----hhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            75421         01111111111    56889999999999999998753 765 777768988764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.4e-40  Score=276.27  Aligned_cols=217  Identities=23%  Similarity=0.215  Sum_probs=160.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|++|||||++|||+++|++|++ |++|++++|+.+..+++.+..++.++.+|+++.++ .+.+.+..+.++++|+|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEE
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHHHHHhcCCCCEE
Confidence            57899999999999999999999988 99999999998888877765567788999998876 45555556678899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.++  .|+||++||..+..+.++...|++||++++.|
T Consensus        80 v~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  156 (245)
T 3e9n_A           80 VHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPGNTIYAASKHALRGL  156 (245)
T ss_dssp             EECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC----------CHHHHHHHHHHHHH
T ss_pred             EECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCcccccCCCCchHHHHHHHHHHHH
Confidence            99999863 4577888999999999999999999999999999774  38999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++++.|++++||++++|+||++.|++........           ..      ..+.+++.+|+|+|++++||++...
T Consensus       157 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----------~~------~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          157 ADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ-----------GT------NFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCC---------------------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh-----------hc------ccccccCCCHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999876543110           00      1133678899999999999997664

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.4e-38  Score=274.36  Aligned_cols=232  Identities=23%  Similarity=0.227  Sum_probs=179.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-----hHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-----DELGAALAST-----IGGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-----~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      +|++|++|||||++|||+++|++|+++|++|++++|+     .+..+++.+.     .++.++.+|++|.++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999987764     4444444332     23678899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCCCCch
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLASHA  162 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~  162 (278)
                      .+++|++|+||||||+. ..+++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+.. +.++...
T Consensus        82 ~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHSCCSEEEECCCCC-BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcchh
Confidence            99999999999999986 456889999999999999999999999999999998866 79999999999884 4566788


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHH----------hhhc-cCCCCHHHHHHHHhhcCCCCC
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYR----------KYLG-KADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~  231 (278)
                      |++||+++++++++++.|++++||+|++|+||.+.|++......          .+.. .....++++.......    .
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~  235 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAI----V  235 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHT----S
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHh----c
Confidence            99999999999999999999999999999999998776432110          0000 0011122222222221    1


Q ss_pred             CCCCCHHHHHHHHHHhccCC
Q 023708          232 GRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~  251 (278)
                      ....+|+++|++++.++..+
T Consensus       236 ~~~~~p~~vA~aiv~~~~~~  255 (324)
T 3u9l_A          236 PPDADVSLVADAIVRVVGTA  255 (324)
T ss_dssp             CTTCCTHHHHHHHHHHHTSC
T ss_pred             CCCCCHHHHHHHHHHHhcCC
Confidence            23468899999999988655

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-38  Score=271.89  Aligned_cols=218  Identities=24%  Similarity=0.261  Sum_probs=183.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCH-HHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKE-EDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~-~~i~~~~~~~~~~   86 (278)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++      ++.++.+|++|. ++++++++++.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999987776655443      367889999998 9999999999999


Q ss_pred             cCCccEEEECCccCCC-----------------------------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 023708           87 KGQLDIMFNNAGISGS-----------------------------GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI  137 (278)
Q Consensus        87 ~g~id~li~nag~~~~-----------------------------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  137 (278)
                      ++++|+||||||+...                             ..++.+.+.++|++.+++|+.+++.++++++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            9999999999998632                             12456778999999999999999999999999998


Q ss_pred             ccCCCcEEEEecCchhhcCC-------------------------------------------CCCchhhhhHHHHHHHH
Q 023708          138 EGQRKGSIICTSSSAAIMGG-------------------------------------------LASHAYSLSKEAIIGLA  174 (278)
Q Consensus       138 ~~~~~~~iv~vsS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~  174 (278)
                      +++ .++||++||..+..+.                                           ++...|++||++++.|+
T Consensus       169 ~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             cCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            755 6899999999886543                                           34568999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      +.++.++.  +|+||+|+||++.|++....                            ...+|++.++.++.++..+...
T Consensus       248 ~~la~e~~--~i~v~~v~PG~v~T~~~~~~----------------------------~~~~~~~~a~~~~~~~~~~~~~  297 (311)
T 3o26_A          248 RVLANKIP--KFQVNCVCPGLVKTEMNYGI----------------------------GNYTAEEGAEHVVRIALFPDDG  297 (311)
T ss_dssp             HHHHHHCT--TSEEEEECCCSBCSGGGTTC----------------------------CSBCHHHHHHHHHHHHTCCSSC
T ss_pred             HHHHhhcC--CceEEEecCCceecCCcCCC----------------------------CCCCHHHHHHHHHHHHhCCCCC
Confidence            99999996  49999999999999986421                            1248999999999998766555


Q ss_pred             ceeeEEee
Q 023708          255 ITAHNLVI  262 (278)
Q Consensus       255 ~tG~~i~~  262 (278)
                      .+|..+..
T Consensus       298 ~~g~~~~~  305 (311)
T 3o26_A          298 PSGFFYDC  305 (311)
T ss_dssp             CCSCEETC
T ss_pred             CCceEecc
Confidence            66655543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-38  Score=268.08  Aligned_cols=217  Identities=24%  Similarity=0.300  Sum_probs=188.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     ++.++.+|++|.++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999987766655433     3678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++|
T Consensus       106 ~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  183 (272)
T 1yb1_A          106 IGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSS  183 (272)
T ss_dssp             TCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             CCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhHHHH
Confidence            999999999999863 45677888999999999999999999999999998755 6899999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHC---CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLARSTACELG---KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |++++.+++.++.|++   +.||++++|+||.++|++...           ..      .      +.+++.+|+|+|++
T Consensus       184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----------~~------~------~~~~~~~~~dva~~  240 (272)
T 1yb1_A          184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------PS------T------SLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------TH------H------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----------cc------c------cccCCCCHHHHHHH
Confidence            9999999999999996   679999999999999987421           00      0      22568899999999


Q ss_pred             HHHhccCCCC
Q 023708          244 ALFLASEEAG  253 (278)
Q Consensus       244 ~~~l~s~~~~  253 (278)
                      +++++.....
T Consensus       241 i~~~~~~~~~  250 (272)
T 1yb1_A          241 LMHGILTEQK  250 (272)
T ss_dssp             HHHHHHTTCS
T ss_pred             HHHHHHcCCC
Confidence            9999976543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.3e-39  Score=281.82  Aligned_cols=240  Identities=21%  Similarity=0.214  Sum_probs=181.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH---HHHHHhh--------hCCeEEEecCCCHHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL---GAALAST--------IGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~---~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+|++|||||++|||++++++|+++|++|+++.|+...   .....+.        .++.++.+|++|.++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            37899999999999999999999999998887664322   1111111        24678899999999999999987 


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                       .+|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+....|+
T Consensus        80 -~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             -TTSCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             -hcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHHH
Confidence             358999999999976 346788899999999999999999999999999998755 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhh-ccCCCCHHHH---HHHHhhcCCCCCCCC-CCHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL-GKADMKPEEV---CKMVRDSGSLLRGRS-ASIED  239 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~ed  239 (278)
                      +||++++.|++.++.|++++||+|++|+||+++|++......... ......+...   ........ .+.++. .+|+|
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ped  235 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK-QVFREAAQNPEE  235 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH-HHHHHHCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHH-HhhhhcCCCHHH
Confidence            999999999999999999999999999999999998754321000 0000011111   11111000 011333 48999


Q ss_pred             HHHHHHHhccC---CCCCceeeEE
Q 023708          240 VAQAALFLASE---EAGFITAHNL  260 (278)
Q Consensus       240 va~~~~~l~s~---~~~~~tG~~i  260 (278)
                      +|++++++++.   ...|++|+.+
T Consensus       236 vA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          236 VAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHcCCCCCeEEEeCchH
Confidence            99999999874   3567787654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=8.4e-38  Score=279.45  Aligned_cols=242  Identities=13%  Similarity=0.061  Sum_probs=194.8

Q ss_pred             CCCcEEEEeCCCChhHHH--HHHHHHHcCCeEEEEecch---------------HHHHHHHhhhC--CeEEEecCCCHHH
Q 023708           15 LTGKVAVITGGARGIGAA--TAKLFAENGAHIVIADILD---------------ELGAALASTIG--GRYIHCDVTKEED   75 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~--ia~~L~~~g~~Vi~~~r~~---------------~~~~~~~~~~~--~~~~~~D~~~~~~   75 (278)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+.               +...+..+..+  +.++.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            578999999999999999  9999999999999998753               22233333323  5678999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccC------------CCCCCc---------------------ccCCHHHHHHHHHHHh
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGIS------------GSGGSI---------------------TSLNMEDVKFLLSVNL  122 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~------------~~~~~~---------------------~~~~~~~~~~~~~~N~  122 (278)
                      ++++++++.+.+|+||+||||||..            ...+++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974            122233                     4679999999999999


Q ss_pred             HHHH-HHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC--chhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCC
Q 023708          123 NGIL-HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS--HAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPS  198 (278)
Q Consensus       123 ~~~~-~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t  198 (278)
                      .+.+ .+++++.+.+...+ .|+||++||..+..+.+..  ..|++||+|+++|+++|+.|+++ +|||||+|+||.+.|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            9998 78888877654433 5899999999999998887  99999999999999999999999 999999999999999


Q ss_pred             hhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcCc
Q 023708          199 EMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSS  272 (278)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~  272 (278)
                      ++....-        ..|........     ++++.++|||+++.+.+|+++  ...+|+.+.+|||..+....
T Consensus       297 ~~s~~ip--------~~p~y~~~~~~-----~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~  355 (418)
T 4eue_A          297 KASAYIP--------TFPLYAAILYK-----VMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDD  355 (418)
T ss_dssp             HHHHTST--------THHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCT
T ss_pred             hhhhcCC--------CCcHHHHHHHH-----HHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCCh
Confidence            9875421        01111111111     346788999999999999976  46789999999877654333

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=6.8e-37  Score=260.77  Aligned_cols=216  Identities=22%  Similarity=0.255  Sum_probs=183.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++|++|||||++|||++++++|++ +|++|++++|+.+...+..+.+     ++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999 9999999999877666554433     4778999999999999999999999999


Q ss_pred             ccEEEECCccCCCCCCcccCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------------
Q 023708           90 LDIMFNNAGISGSGGSITSLN-MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------  156 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------  156 (278)
                      +|+||||||+....  ..+.+ .+++++.+++|+.+++++++++++.|.+   .++||++||..+..+            
T Consensus        83 id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~  157 (276)
T 1wma_A           83 LDVLVNNAGIAFKV--ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKF  157 (276)
T ss_dssp             EEEEEECCCCCCCT--TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CCEEEECCcccccC--CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHhhc
Confidence            99999999976332  23444 5899999999999999999999998865   479999999887642            


Q ss_pred             -----------------------------CCCCchhhhhHHHHHHHHHHHHHHHCC----CCcEEEEecCCCCCChhhHH
Q 023708          157 -----------------------------GLASHAYSLSKEAIIGLARSTACELGK----HGIRVNCISPHGVPSEMLVN  203 (278)
Q Consensus       157 -----------------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~----~~i~v~~v~pG~v~t~~~~~  203 (278)
                                                   ......|++||++++.|++.++.++++    .||++++|+||++.|++...
T Consensus       158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                         012368999999999999999999987    79999999999999997521


Q ss_pred             HHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC--CCCceeeEEeecCC
Q 023708          204 AYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE--AGFITAHNLVIDGG  265 (278)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~--~~~~tG~~i~~dgG  265 (278)
                                                  .+..+|+|+|+.+++|++.+  ..+++|+.|. +|+
T Consensus       238 ----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 ----------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             ----------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ----------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                                        23679999999999999854  3699999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.1e-36  Score=257.60  Aligned_cols=216  Identities=23%  Similarity=0.214  Sum_probs=184.6

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ....+++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++      ++.++.+|++|.++++++++++.
T Consensus        22 ~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  101 (286)
T 1xu9_A           22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG  101 (286)
T ss_dssp             CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999987776655432      35688999999999999999999


Q ss_pred             hhcCCccEEEEC-CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           85 SWKGQLDIMFNN-AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        85 ~~~g~id~li~n-ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +.+|++|+|||| +|.. . .++.+.+.+++++.+++|+.+++.++++++|.|.++  .++||++||..+..+.++...|
T Consensus       102 ~~~g~iD~li~naag~~-~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  177 (286)
T 1xu9_A          102 KLMGGLDMLILNHITNT-S-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAY  177 (286)
T ss_dssp             HHHTSCSEEEECCCCCC-C-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCccCC-C-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCCCccHH
Confidence            999999999999 5654 2 245567899999999999999999999999998764  4899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHH--CCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          164 SLSKEAIIGLARSTACEL--GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      ++||++++.++++++.|+  ...+|+++.|+||+++|++......         .        .    ......+|+|+|
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---------~--------~----~~~~~~~~~~vA  236 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS---------G--------I----VHMQAAPKEECA  236 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC---------G--------G----GGGGCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc---------c--------c----ccCCCCCHHHHH
Confidence            999999999999999999  5789999999999999998754210         0        0    002356899999


Q ss_pred             HHHHHhccCC
Q 023708          242 QAALFLASEE  251 (278)
Q Consensus       242 ~~~~~l~s~~  251 (278)
                      +.++..+...
T Consensus       237 ~~i~~~~~~~  246 (286)
T 1xu9_A          237 LEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHhcC
Confidence            9999988644

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.1e-35  Score=250.53  Aligned_cols=222  Identities=28%  Similarity=0.340  Sum_probs=181.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |++|||||++|||++++++|+++|++|++++|+.+....        .+.+|+++.++++++++++   .+++|+|||||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~A   70 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRC---GGVLDGLVCCA   70 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHH---TTCCSEEEECC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHc---CCCccEEEECC
Confidence            689999999999999999999999999999997643211        1568999999999888754   36899999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--------------------
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--------------------  157 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------------  157 (278)
                      |.....        +++++.+++|+.+++++++++.+.|.+.+ .+++|++||..++.+.                    
T Consensus        71 g~~~~~--------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           71 GVGVTA--------ANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             CCCTTS--------SCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             CCCCcc--------hhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            975321        34789999999999999999999998754 6899999999987654                    


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          158 ------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       158 ------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                            ++...|++||++++.+++.++.+++++|++++.++||.+.|++........     ..    ......... +.
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~-----~~----~~~~~~~~~-~~  211 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP-----RY----GESTRRFVA-PL  211 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT-----TT----HHHHHSCCC-TT
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch-----hh----HHHHHHHHH-Hh
Confidence                  456689999999999999999999888999999999999999876543110     01    111111111 45


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++.+|+|+|++++++++++..+++|+.+++|||..+.
T Consensus       212 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          212 GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            78999999999999999988788999999999998754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=6.4e-35  Score=238.02  Aligned_cols=198  Identities=18%  Similarity=0.214  Sum_probs=174.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||++|||++++++|+ +|++|++++|+.+            ++.+|+++.++++++++++    +++|+||||||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQV----GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHH----CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHh----CCCCEEEECCC
Confidence            69999999999999999999 9999999999864            4789999999999998764    78999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      .. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+   .++||++||..+..+.++...|+++|++++.+++.++
T Consensus        68 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~  143 (202)
T 3d7l_A           68 SA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAA  143 (202)
T ss_dssp             CC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred             CC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHH
Confidence            76 3457788999999999999999999999999998854   3799999999999999999999999999999999999


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAH  258 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~  258 (278)
                      .|+ ++||+++.|+||.+.|++...                   ..   ..+.+++.+|+|+|++++++++   .+.+|+
T Consensus       144 ~e~-~~gi~v~~v~pg~v~~~~~~~-------------------~~---~~~~~~~~~~~dva~~~~~~~~---~~~~G~  197 (202)
T 3d7l_A          144 IEM-PRGIRINTVSPNVLEESWDKL-------------------EP---FFEGFLPVPAAKVARAFEKSVF---GAQTGE  197 (202)
T ss_dssp             TSC-STTCEEEEEEECCBGGGHHHH-------------------GG---GSTTCCCBCHHHHHHHHHHHHH---SCCCSC
T ss_pred             HHc-cCCeEEEEEecCccCCchhhh-------------------hh---hccccCCCCHHHHHHHHHHhhh---ccccCc
Confidence            999 789999999999999987421                   00   0134678899999999998883   468999


Q ss_pred             EEeec
Q 023708          259 NLVID  263 (278)
Q Consensus       259 ~i~~d  263 (278)
                      .|++|
T Consensus       198 ~~~vd  202 (202)
T 3d7l_A          198 SYQVY  202 (202)
T ss_dssp             EEEEC
T ss_pred             eEecC
Confidence            99987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.7e-35  Score=298.43  Aligned_cols=238  Identities=18%  Similarity=0.216  Sum_probs=192.4

Q ss_pred             CCCCCcEEEEeCCCCh-hHHHHHHHHHHcCCeEEEE-ecchHHHHHHHh----hh-----CCeEEEecCCCHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARG-IGAATAKLFAENGAHIVIA-DILDELGAALAS----TI-----GGRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        13 ~~l~~k~vlVtGas~g-iG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~----~~-----~~~~~~~D~~~~~~i~~~~~   81 (278)
                      +++++|++|||||++| ||+++|+.|+++|++|+++ .|+.+...+..+    ..     .+.++.+|++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3688999999999998 9999999999999999998 576555544332    22     25678999999999999999


Q ss_pred             HHHhh-----cC-CccEEEECCccCCCCCCcccCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHccCCCcEEEEecCc
Q 023708           82 LAVSW-----KG-QLDIMFNNAGISGSGGSITSLN--MEDVKFLLSVNLNGILHGIKHA--AKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        82 ~~~~~-----~g-~id~li~nag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~~~~iv~vsS~  151 (278)
                      ++.+.     +| ++|+||||||+.....++.+.+  .++|++.|++|+.+++.+++.+  +|.|.+++ .|+||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEEcCh
Confidence            99988     66 9999999999864322788888  8999999999999999999988  67776543 5899999999


Q ss_pred             hhhcCCCCCchhhhhHHHHHHH-HHHHHHHHCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC
Q 023708          152 AAIMGGLASHAYSLSKEAIIGL-ARSTACELGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL  229 (278)
Q Consensus       152 ~~~~~~~~~~~Y~~sK~a~~~l-~~~l~~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (278)
                      .+..+  +...|++||+++++| ++.++.++++. |+||+|+||+++ |++...        .  .  ........   .
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~--------~--~--~~~~~~~~---~  891 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSA--------N--N--IIAEGIEK---M  891 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-------------C--C--TTHHHHHT---T
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEeccccccccccc--------c--h--hHHHHHHh---c
Confidence            98877  567899999999999 99999999887 999999999999 787542        0  0  01111111   1


Q ss_pred             CCCCCCCHHHHHHHHHHhccCC-CCCceeeEEeec--CCcccCc
Q 023708          230 LRGRSASIEDVAQAALFLASEE-AGFITAHNLVID--GGYTTGT  270 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~-~~~~tG~~i~~d--gG~~~~~  270 (278)
                      +. |..+|+|+|++++||+++. ..++||+.|.+|  ||++...
T Consensus       892 pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          892 GV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             SC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             CC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence            32 5679999999999999987 789999999875  9987543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.3e-36  Score=294.30  Aligned_cols=239  Identities=18%  Similarity=0.218  Sum_probs=193.3

Q ss_pred             cCCCCCcEEEEeCCCCh-hHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARG-IGAATAKLFAENGAHIVIA-DILDELGAALASTI---------GGRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~g-iG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~   80 (278)
                      .+++++|++|||||++| ||+++|++|+++|++|+++ +|+.+...+..+++         ++.++.+|++|.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 56554433333222         2567899999999999999


Q ss_pred             HHHHhh-----cC-CccEEEECCccCCCCCCcccCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHccCCCcEEEEecC
Q 023708           81 RLAVSW-----KG-QLDIMFNNAGISGSGGSITSLN--MEDVKFLLSVNLNGILHGIKHA--AKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        81 ~~~~~~-----~g-~id~li~nag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~~~~iv~vsS  150 (278)
                      +++.+.     +| ++|+||||||+.....++.+.+  .++|++.+++|+.+++.+++.+  +|.|.+++ .++||++||
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVnISS  629 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSP  629 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCCCCS
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEEEEC
Confidence            999988     77 9999999999864322778888  8999999999999999999998  77776643 589999999


Q ss_pred             chhhcCCCCCchhhhhHHHHHHH-HHHHHHHHCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHhhcCC
Q 023708          151 SAAIMGGLASHAYSLSKEAIIGL-ARSTACELGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVRDSGS  228 (278)
Q Consensus       151 ~~~~~~~~~~~~Y~~sK~a~~~l-~~~l~~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                      ..+..+  +...|++||+++++| ++.++.++++. |+||+|+||+++ |++....  ..          ....   ...
T Consensus       630 iAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~--e~----------~~~~---l~~  691 (1688)
T 2pff_A          630 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--NI----------IAEG---IEK  691 (1688)
T ss_dssp             CTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT--TT----------CSTT---TSS
T ss_pred             hHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc--hH----------HHHH---HHh
Confidence            998877  567899999999999 78888888876 999999999999 7764320  00          0000   111


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCC-CCCceeeEEeec--CCcccCc
Q 023708          229 LLRGRSASIEDVAQAALFLASEE-AGFITAHNLVID--GGYTTGT  270 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~-~~~~tG~~i~~d--gG~~~~~  270 (278)
                      .+. |..+|+|+|++++||+++. ..++||+.+.+|  ||+....
T Consensus       692 ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          692 MGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             SSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             CCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            232 5669999999999999988 689999999876  9987544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=6.4e-34  Score=232.77  Aligned_cols=200  Identities=19%  Similarity=0.213  Sum_probs=170.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |++|||||++|||++++++|+++  +|++++|+.+..+.+.+.++..++.+|++|.+++++++++    ++++|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE----AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH----HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh----cCCCCEEEECC
Confidence            57999999999999999999998  9999999988777776655447888999999999999886    68999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST  177 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  177 (278)
                      |.. ...++.+.+.++|++.+++|+.+++.+++++    .+.+ .++||++||..++.+.++...|+++|++++.+++.+
T Consensus        75 g~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  148 (207)
T 2yut_A           75 GKA-GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAA  148 (207)
T ss_dssp             CCC-CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHH
T ss_pred             CcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHH
Confidence            976 4467778889999999999999999999988    2322 589999999999999999999999999999999999


Q ss_pred             HHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       178 ~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +.+++++||+++.++||.+.|++....                       ..+.+++.+|+|+|++++++++.+.
T Consensus       149 ~~~~~~~gi~v~~v~pg~v~t~~~~~~-----------------------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          149 RKELLREGVHLVLVRLPAVATGLWAPL-----------------------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHTTTCEEEEECCCCBCSGGGGGG-----------------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHhhhCCEEEEEecCcccCCCcccc-----------------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999973210                       0134778999999999999997654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.4e-34  Score=289.62  Aligned_cols=237  Identities=21%  Similarity=0.216  Sum_probs=191.8

Q ss_pred             CCCCCcEEEEeCCCCh-hHHHHHHHHHHcCCeEEEEe-cchHHHHH----HHhhh-----CCeEEEecCCCHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARG-IGAATAKLFAENGAHIVIAD-ILDELGAA----LASTI-----GGRYIHCDVTKEEDVESAVR   81 (278)
Q Consensus        13 ~~l~~k~vlVtGas~g-iG~~ia~~L~~~g~~Vi~~~-r~~~~~~~----~~~~~-----~~~~~~~D~~~~~~i~~~~~   81 (278)
                      +++++|++|||||++| ||+++|++|+++|++|++++ |+.+...+    +.+++     .+.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999 99999999999999999985 55444433    22222     25678999999999999999


Q ss_pred             HHHhh---cC-CccEEEECCccCCCCCCcccCC--HHHHHHHHHHHhHHHHHHHHH--HHHHHHccCCCcEEEEecCchh
Q 023708           82 LAVSW---KG-QLDIMFNNAGISGSGGSITSLN--MEDVKFLLSVNLNGILHGIKH--AAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        82 ~~~~~---~g-~id~li~nag~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ++.+.   +| +||+||||||+.....++.+.+  .++|++.+++|+.+++.+++.  +++.|.+++ .|+||++||..+
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS~ag  806 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSPNHG  806 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECSCSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcchhh
Confidence            99998   89 9999999999864322788888  899999999999999999987  677776543 589999999998


Q ss_pred             hcCCCCCchhhhhHHHHHHHHHHHHH-HHCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          154 IMGGLASHAYSLSKEAIIGLARSTAC-ELGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       154 ~~~~~~~~~Y~~sK~a~~~l~~~l~~-e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                      ..+  +...|++||+++++|++.+.. ++++. |+||+|+||+++ |++....            +........   .+.
T Consensus       807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~------------~~~~~~~~~---~pl  868 (1878)
T 2uv9_A          807 TFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN------------NLVAEGVEK---LGV  868 (1878)
T ss_dssp             SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH------------HHTHHHHHT---TTC
T ss_pred             ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc------------hhhHHHHHh---cCC
Confidence            877  466899999999999987655 57766 999999999999 9986431            011111121   132


Q ss_pred             CCCCCHHHHHHHHHHhccCCC-CCceeeEEee--cCCcccC
Q 023708          232 GRSASIEDVAQAALFLASEEA-GFITAHNLVI--DGGYTTG  269 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~-~~~tG~~i~~--dgG~~~~  269 (278)
                       |..+|+|+|++++||+++.. .++||+.+.+  |||++..
T Consensus       869 -r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          869 -RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             -CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             -CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence             56699999999999999886 8999999987  5998765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=1.8e-31  Score=246.63  Aligned_cols=217  Identities=16%  Similarity=0.159  Sum_probs=174.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEE-ecch-------------HHHHHHHhhh-----CCeEEEecCCCHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIA-DILD-------------ELGAALASTI-----GGRYIHCDVTKEED   75 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~-~r~~-------------~~~~~~~~~~-----~~~~~~~D~~~~~~   75 (278)
                      .++++|||||++|||+++|++|+++|++ |+++ +|+.             +..+++.+++     ++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            6899999999999999999999999997 6777 8873             2233333222     26788999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ++++++++. .+++||+||||||+.. ..++.+.+.++|++.+++|+.+++++.+.+.+.+.+++..++||++||.++..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999988 7899999999999874 46889999999999999999999999999999987654358999999999999


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA  235 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
                      +.++...|+++|+++++|+    .+++..||++++|+||+++|+|..+.            . ....+...    .-+..
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~------------~-~~~~~~~~----g~~~l  466 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG------------A-TGERLRRL----GLRPL  466 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS------------H-HHHHHHHT----TBCCB
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch------------h-hHHHHHhc----CCCCC
Confidence            9999999999999999875    56777899999999999999987321            0 11111111    12357


Q ss_pred             CHHHHHHHHHHhccCCCCCc
Q 023708          236 SIEDVAQAALFLASEEAGFI  255 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~  255 (278)
                      +|+|+++++.++++.....+
T Consensus       467 ~pee~a~~l~~~l~~~~~~v  486 (525)
T 3qp9_A          467 APATALTALDTALGHGDTAV  486 (525)
T ss_dssp             CHHHHHHHHHHHHHHTCSEE
T ss_pred             CHHHHHHHHHHHHhCCCCeE
Confidence            99999999999997665443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=9.1e-31  Score=275.16  Aligned_cols=240  Identities=15%  Similarity=0.140  Sum_probs=177.4

Q ss_pred             CCCCcEEEEeCCCCh-hHHHHHHHHHHcCCeEEEEecchHH-----HHHHHhhhC-----CeEEEecCCCHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARG-IGAATAKLFAENGAHIVIADILDEL-----GAALASTIG-----GRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        14 ~l~~k~vlVtGas~g-iG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~   82 (278)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     .+++.+++.     +..+.+|++|.+++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999987655     445544442     45788999999999999999


Q ss_pred             HHh----hcCCccEEEECCcc----CCCCCCcccCCHHH----HHHHHHHHhHHHHHHHHHHHHHHHccCCC---cEEEE
Q 023708           83 AVS----WKGQLDIMFNNAGI----SGSGGSITSLNMED----VKFLLSVNLNGILHGIKHAAKAMIEGQRK---GSIIC  147 (278)
Q Consensus        83 ~~~----~~g~id~li~nag~----~~~~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~~~~~---~~iv~  147 (278)
                      +.+    .+|++|+||||||+    ........+.+.++    ++..+++|+.+++.+++.+.+.|..++..   +.++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    89999999999997    21112222333333    45559999999999999999999875421   12333


Q ss_pred             ecCchhhcCCCCCchhhhhHHHHHHHHHHHHHH--HCCCCcEEEEecCCCCC-ChhhHHHHHhhhccCCCCHHHHHHHHh
Q 023708          148 TSSSAAIMGGLASHAYSLSKEAIIGLARSTACE--LGKHGIRVNCISPHGVP-SEMLVNAYRKYLGKADMKPEEVCKMVR  224 (278)
Q Consensus       148 vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e--~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                      .++..+.  .++...|++||+|+.+|+++++.|  +++ +|+||.++||++. |++....            ........
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~------------~~~~~~~~ 2357 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN------------DAIVSAVE 2357 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT------------TTTHHHHG
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc------------hhHHHHHH
Confidence            3333332  334568999999999999999999  664 6999999999998 6654210            01111122


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHhccCCCCCc-eeeEEeec--CCcccCcCc
Q 023708          225 DSGSLLRGRSASIEDVAQAALFLASEEAGFI-TAHNLVID--GGYTTGTSS  272 (278)
Q Consensus       225 ~~~~~~~~~~~~~edva~~~~~l~s~~~~~~-tG~~i~~d--gG~~~~~~~  272 (278)
                      ..   + .|..+|+|||.+++||+|+...++ +|+.+.+|  ||+....+.
T Consensus      2358 ~~---~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~ 2404 (3089)
T 3zen_D         2358 EA---G-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKID 2404 (3089)
T ss_dssp             GG---S-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCC
T ss_pred             hc---C-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCC
Confidence            11   2 234499999999999999886665 55666666  999653333

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.4e-29  Score=231.65  Aligned_cols=219  Identities=19%  Similarity=0.249  Sum_probs=169.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchH---HHHHHHhh---h--CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDE---LGAALAST---I--GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~---~~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ...++.++   .  ++.++.||++|.+++.++++++.+.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            359999999999999999999999999 7888888632   22333222   2  3678899999999999999998777


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       +++|+||||||+.....++.+.+.++|++.+++|+.+++++.+.+.+.    . .++||++||..+..+.++...|+++
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~g~~g~~~YaAa  391 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVWGSGGQPGYAAA  391 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHTTCTTCHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcCCCCCcHHHHHH
Confidence             789999999998745578899999999999999999999998876654    2 5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.|++.++    ..||++++|+||.+.++.....           ......+...-     -...+|++.++.+.+
T Consensus       392 Ka~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~-----------~~~~~~l~~~g-----~~~l~pe~~~~~l~~  451 (496)
T 3mje_A          392 NAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATD-----------PEVHDRLVRQG-----VLAMEPEHALGALDQ  451 (496)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECEESSSCC-----------------CHHHHHTT-----EEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCcccCCccccC-----------hHHHHHHHhcC-----CCCCCHHHHHHHHHH
Confidence            999999887544    5699999999998876543211           01111111110     123589999999999


Q ss_pred             hccCCCCCceeeEE
Q 023708          247 LASEEAGFITAHNL  260 (278)
Q Consensus       247 l~s~~~~~~tG~~i  260 (278)
                      ++..+........+
T Consensus       452 ~l~~~~~~~~v~~l  465 (496)
T 3mje_A          452 MLENDDTAAAITLM  465 (496)
T ss_dssp             HHHHTCSEEEECEE
T ss_pred             HHcCCCceEEEEEc
Confidence            99766544443333

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.5e-28  Score=236.95  Aligned_cols=221  Identities=16%  Similarity=0.210  Sum_probs=170.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHH-HcCC-eEEEEecch---HHHHHHHhhh---C--CeEEEecCCCHHHHHHHHHHHHh
Q 023708           16 TGKVAVITGGARGIGAATAKLFA-ENGA-HIVIADILD---ELGAALASTI---G--GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~-~~g~-~Vi~~~r~~---~~~~~~~~~~---~--~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++|+.   +..+++.+++   +  +.++.||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 7999 599999972   2333333322   2  67889999999999999999887


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      .+ +||+||||||+.. ..++.+++.++|++.+++|+.|++++.+++.|.|       +||++||.++..+.+++..|++
T Consensus       609 ~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 9999999999874 4688999999999999999999999999986655       7999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|+    |+++++.++++.||++|+|+||++.|++......          +.....+...   .. ....++|....+.
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~----------~~~~~~~~~~---g~-~~l~~~e~~~~~~  741 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR----------EAEQDRLARS---GL-LPISTEEGLSQFD  741 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH----------HHHHHHHHHT---TB-CCCCHHHHHHHHH
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc----------HHHHHHHHhc---CC-CCCCHHHHHHHHH
Confidence            996    5566667777789999999999999886554321          1111122211   11 2357777777777


Q ss_pred             HhccCCCCCceeeEEeec
Q 023708          246 FLASEEAGFITAHNLVID  263 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~d  263 (278)
                      .++..+...+....+.+.
T Consensus       742 ~~l~~~~~~~~~~~~d~~  759 (795)
T 3slk_A          742 AACGGAHTVVAPVRFSRL  759 (795)
T ss_dssp             HHHTSSCSSCCCCCBCCC
T ss_pred             HHHhCCCcEEEEEecCHH
Confidence            666555444444334333

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=6.5e-29  Score=207.25  Aligned_cols=206  Identities=15%  Similarity=0.138  Sum_probs=158.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC-eEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ...++++|++|||||+|+||++++++|+++|++|++++|+.+...++... ++ .++.+|++         +.+.+.+++
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-~~~~~~~~Dl~---------~~~~~~~~~   84 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-GASDIVVANLE---------EDFSHAFAS   84 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-TCSEEEECCTT---------SCCGGGGTT
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-CCceEEEcccH---------HHHHHHHcC
Confidence            34678999999999999999999999999999999999998877666543 67 89999998         233445568


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---CCCchhhhh
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---LASHAYSLS  166 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~Y~~s  166 (278)
                      +|+||||||....         +++++.+++|+.++.++++++...    + .++||++||..+..+.   +....|+.+
T Consensus        85 ~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~s  150 (236)
T 3e8x_A           85 IDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEKR----G-IKRFIMVSSVGTVDPDQGPMNMRHYLVA  150 (236)
T ss_dssp             CSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHHH----T-CCEEEEECCTTCSCGGGSCGGGHHHHHH
T ss_pred             CCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHHc----C-CCEEEEEecCCCCCCCCChhhhhhHHHH
Confidence            9999999997522         457899999999999999988543    2 5799999997776554   456789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |++++.+++       ..|++++.++||.+.++.....+.   ...            .  ......+++++|+|+++++
T Consensus       151 K~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~---~~~------------~--~~~~~~~i~~~Dva~~~~~  206 (236)
T 3e8x_A          151 KRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVT---VSP------------H--FSEITRSITRHDVAKVIAE  206 (236)
T ss_dssp             HHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEE---EES------------S--CSCCCCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEE---ecc------------C--CCcccCcEeHHHHHHHHHH
Confidence            999999876       458999999999998875322110   000            0  0012568899999999999


Q ss_pred             hccCCCCCceeeEEeecCCc
Q 023708          247 LASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +++.+.  .+|+.+++++|.
T Consensus       207 ~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          207 LVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HTTCGG--GTTEEEEEEECS
T ss_pred             HhcCcc--ccCCeEEEeCCC
Confidence            997654  789999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=1.1e-26  Score=213.01  Aligned_cols=209  Identities=17%  Similarity=0.190  Sum_probs=163.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchH---HHHHHHhh---h--CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDE---LGAALAST---I--GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~---~~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|||||++|||++++++|+++|++ |++++|+.+   ...++.++   .  ++.++.||++|.+++.++++++ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5799999999999999999999999995 999999763   22222221   1  3678899999999999999988 56


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++++|+||||||+.. ..++.+.+.+++++.+++|+.+++++.+.+.+.     ..++||++||..+..+.++...|+++
T Consensus       304 ~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-----~~~~~V~~SS~a~~~g~~g~~~Yaaa  377 (486)
T 2fr1_A          304 DVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAPGLGGYAPG  377 (486)
T ss_dssp             TSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-----CCCEEEEEcChHhcCCCCCCHHHHHH
Confidence            789999999999874 467889999999999999999999998876442     26899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh-hhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSE-MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      |++++.|++.++    ..|+++++|+||.+.++ |.....              ......    ..-...+|+|+++++.
T Consensus       378 ka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~--------------~~~~~~----~g~~~i~~e~~a~~l~  435 (486)
T 2fr1_A          378 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV--------------ADRFRR----HGVIEMPPETACRALQ  435 (486)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC--------------------------CTT----TTEECBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH--------------HHHHHh----cCCCCCCHHHHHHHHH
Confidence            999999876543    45999999999999876 322110              000000    0013579999999999


Q ss_pred             HhccCCCC
Q 023708          246 FLASEEAG  253 (278)
Q Consensus       246 ~l~s~~~~  253 (278)
                      .++.....
T Consensus       436 ~~l~~~~~  443 (486)
T 2fr1_A          436 NALDRAEV  443 (486)
T ss_dssp             HHHHTTCS
T ss_pred             HHHhCCCC
Confidence            99875543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=1.5e-26  Score=196.61  Aligned_cols=184  Identities=19%  Similarity=0.156  Sum_probs=148.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |++|++|||||+||||++++++|+++|++|++++|++....    ..++.++.+|++|.+++.++++       ++|+||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi   69 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVA-------GCDGIV   69 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHc-------CCCEEE
Confidence            35689999999999999999999999999999999864322    2346789999999999999886       799999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh------------cCCCCCch
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI------------MGGLASHA  162 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~------------~~~~~~~~  162 (278)
                      ||||...         .++|++.+++|+.+++++++++.+.    + .++||++||..++            .+.+....
T Consensus        70 ~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~  135 (267)
T 3rft_A           70 HLGGISV---------EKPFEQILQGNIIGLYNLYEAARAH----G-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGL  135 (267)
T ss_dssp             ECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSH
T ss_pred             ECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCCh
Confidence            9999731         1457899999999999999998442    3 6799999999887            33455678


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+.||++.+.+++.++.++   +++++.|+||.+.++....             ...            ..+.+++|+++
T Consensus       136 Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~-------------~~~------------~~~~~~~d~a~  187 (267)
T 3rft_A          136 YGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY-------------RML------------STWFSHDDFVS  187 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST-------------THH------------HHBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC-------------Cce------------eeEEcHHHHHH
Confidence            9999999999999999887   7888889888887663211             000            12468999999


Q ss_pred             HHHHhccCC
Q 023708          243 AALFLASEE  251 (278)
Q Consensus       243 ~~~~l~s~~  251 (278)
                      .+..++.++
T Consensus       188 ~~~~~~~~~  196 (267)
T 3rft_A          188 LIEAVFRAP  196 (267)
T ss_dssp             HHHHHHHCS
T ss_pred             HHHHHHhCC
Confidence            999888654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=8.9e-26  Score=198.69  Aligned_cols=220  Identities=15%  Similarity=0.088  Sum_probs=168.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHc-CC-eEEEEecchHHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAEN-GA-HIVIADILDELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~-g~-~Vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..+++|++|||||+|+||++++++|+++ |+ +|++++|++.....+.+.+   ++.++.+|++|.+++.++++      
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE------   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh------
Confidence            4578999999999999999999999999 98 9999999987766665443   47789999999998888765      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                       ++|+||||||....  +   ....++.+.+++|+.++.++++++.+.    + .+++|++||..+..|   ...|+.||
T Consensus        91 -~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~p---~~~Y~~sK  156 (344)
T 2gn4_A           91 -GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAANP---INLYGATK  156 (344)
T ss_dssp             -TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSSC---CSHHHHHH
T ss_pred             -cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCCC---ccHHHHHH
Confidence             69999999997521  1   112345789999999999999999875    2 579999999876544   46899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc------CCCCCCCCCCHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS------GSLLRGRSASIEDVA  241 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~edva  241 (278)
                      ++++.+++.++.++++.|+++++++||.+.++... ..          +.-........      .....+.+.+++|+|
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i----------~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a  225 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VV----------PFFKKLVQNKASEIPITDIRMTRFWITLDEGV  225 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HH----------HHHHHHHHHTCCCEEESCTTCEEEEECHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HH----------HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHH
Confidence            99999999999988888999999999999876421 10          00011111110      000113468999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCCc
Q 023708          242 QAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +++++++...   ..|+.++++++.
T Consensus       226 ~~v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          226 SFVLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHHHHC---CSSCEEEECCCE
T ss_pred             HHHHHHHhhc---cCCCEEecCCCc
Confidence            9999998754   357888887763

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=9.1e-26  Score=207.70  Aligned_cols=205  Identities=20%  Similarity=0.215  Sum_probs=162.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchH---HHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDE---LGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~---~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ...++.+++     ++.++.||++|.+++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            579999999999999999999999999 5889998753   222222221     267889999999999999886    


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       +++|+||||||+.. ..++.+.+.+++++.+++|+.+++++.+.+.+.    ...++||++||..+..+.++...|+++
T Consensus       334 -~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 -YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             -CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence             68999999999863 467889999999999999999999988865432    125799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCC-CChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGV-PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      |++++.|++.++    ..|+++++|+||++ .|+|.....             ........     -...+|+|+++++.
T Consensus       408 Ka~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~-------------~~~~~~~g-----~~~l~~e~~a~~l~  465 (511)
T 2z5l_A          408 NAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAG-------------EESLSRRG-----LRAMDPDAAVDALL  465 (511)
T ss_dssp             HHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHH-------------HHHHHHHT-----BCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HcCCcEEEEECCcccCCccccccc-------------HHHHHhcC-----CCCCCHHHHHHHHH
Confidence            999999998653    56999999999999 677653211             01111110     13579999999999


Q ss_pred             HhccCCC
Q 023708          246 FLASEEA  252 (278)
Q Consensus       246 ~l~s~~~  252 (278)
                      .++....
T Consensus       466 ~al~~~~  472 (511)
T 2z5l_A          466 GAMGRND  472 (511)
T ss_dssp             HHHHHTC
T ss_pred             HHHhCCC
Confidence            9986553

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=6.6e-26  Score=187.14  Aligned_cols=193  Identities=15%  Similarity=0.076  Sum_probs=146.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHH-HcCCeEEEEecchH-HHHHHH-hhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           17 GKVAVITGGARGIGAATAKLFA-ENGAHIVIADILDE-LGAALA-STIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~-~~g~~Vi~~~r~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|++|||||+|+||++++++|+ ++|++|++++|+.+ ..+++. ...++.++.+|++|.++++++++       ++|+|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   77 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NAEVV   77 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc-------CCCEE
Confidence            3789999999999999999999 89999999999987 665553 23357789999999999988875       68999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc----------hh
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH----------AY  163 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~----------~Y  163 (278)
                      |||||..                    |+.     ++.+++.+.+.+ .++||++||..++.+.+...          .|
T Consensus        78 v~~ag~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y  131 (221)
T 3r6d_A           78 FVGAMES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISY  131 (221)
T ss_dssp             EESCCCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHH
T ss_pred             EEcCCCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHH
Confidence            9999842                    222     778888887755 68999999999887665544          89


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +.+|.+++.+++.       .+++++.|+||.+.++.....+   ...             .......++.++++|+|++
T Consensus       132 ~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~dvA~~  188 (221)
T 3r6d_A          132 VQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDY---ELI-------------PEGAQFNDAQVSREAVVKA  188 (221)
T ss_dssp             HHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCC---EEE-------------CTTSCCCCCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcce---eec-------------cCCccCCCceeeHHHHHHH
Confidence            9999999988763       5899999999999776221100   000             0000122447899999999


Q ss_pred             HHHhc--cCCCCCceeeEEeecCC
Q 023708          244 ALFLA--SEEAGFITAHNLVIDGG  265 (278)
Q Consensus       244 ~~~l~--s~~~~~~tG~~i~~dgG  265 (278)
                      +++++  +++..++++.....+.+
T Consensus       189 ~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          189 IFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             HHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             HHHHHHhcChhhhhcceeeecCCC
Confidence            99999  87776666544444443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=7.8e-26  Score=197.77  Aligned_cols=225  Identities=16%  Similarity=0.120  Sum_probs=162.3

Q ss_pred             CccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708            8 NKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-IGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         8 ~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++.+.+++++++|||||+|+||++++++|+++|++|++++|+.+...+..+. .++.++.+|++|.+++.++++++   
T Consensus        11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---
Confidence            34456688999999999999999999999999999999999864322111111 24678899999999999988765   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----C---
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----L---  158 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~---  158 (278)
                        ++|+||||||.....      +.++++  +++|+.++.++++++...    + .+++|++||...+...     +   
T Consensus        88 --~~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~~~~~~E  152 (330)
T 2pzm_A           88 --KPTHVVHSAAAYKDP------DDWAED--AATNVQGSINVAKAASKA----G-VKRLLNFQTALCYGRPATVPIPIDS  152 (330)
T ss_dssp             --CCSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHHH----T-CSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred             --CCCEEEECCccCCCc------cccChh--HHHHHHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCccCCCCcCC
Confidence              799999999975321      335666  999999999999998853    2 5799999999876543     2   


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHHHHCCCCcE-EEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          159 ---ASHAYSLSKEAIIGLARSTACELGKHGIR-VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       159 ---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                         ....|+.+|++++.+++.+  ++....+| ++.+.||. .+.+............ .       ... . .. ..++
T Consensus       153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~-~-------~~~-~-~~-~~~~  218 (330)
T 2pzm_A          153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ-K-------CFC-S-DT-VRDF  218 (330)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC-C-------CCE-E-SC-EECE
T ss_pred             CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC-E-------EeC-C-CC-Eecc
Confidence               5568999999999999887  44444566 66777875 4555443322111000 0       000 0 00 2567


Q ss_pred             CCHHHHHH-HHHHhccCCCCCceeeEEeecCCccc
Q 023708          235 ASIEDVAQ-AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~~edva~-~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++|+|+ +++++++...    |+.++++||...
T Consensus       219 i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          219 LDMSDFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             EEHHHHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             eeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            89999999 9999997642    899999998754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=2.1e-27  Score=198.56  Aligned_cols=201  Identities=17%  Similarity=0.101  Sum_probs=148.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|++|++|||||+|+||++++++|+++|+  +|++++|+.+...... ..++.++.+|++|.++++++++       ++|
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------~~d   86 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQ-------GHD   86 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGS-------SCS
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhc-------CCC
Confidence            36789999999999999999999999999  9999999764332221 1246788999999988877664       799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||....        ..++++.+++|+.++..+++++.+    .+ .++||++||..++.+  ....|+.+|++++
T Consensus        87 ~vi~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e  151 (242)
T 2bka_A           87 VGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGADKS--SNFLYLQVKGEVE  151 (242)
T ss_dssp             EEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             EEEECCCcccc--------cCCcccceeeeHHHHHHHHHHHHH----CC-CCEEEEEccCcCCCC--CcchHHHHHHHHH
Confidence            99999996411        145788999999999988886543    23 579999999887653  3458999999999


Q ss_pred             HHHHHHHHHHCCCCc-EEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-CCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELGKHGI-RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-LLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~edva~~~~~l~s  249 (278)
                      .+++.+       ++ +++.|+||.+.|+.......         ...........+. ...+++++|+|+|++++++++
T Consensus       152 ~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  215 (242)
T 2bka_A          152 AKVEEL-------KFDRYSVFRPGVLLCDRQESRPG---------EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV  215 (242)
T ss_dssp             HHHHTT-------CCSEEEEEECCEEECTTGGGSHH---------HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             HHHHhc-------CCCCeEEEcCceecCCCCCCcHH---------HHHHHHhhcccCccccCCcccCHHHHHHHHHHHHh
Confidence            998764       45 79999999999986432110         0001111111110 013578899999999999998


Q ss_pred             CCCC
Q 023708          250 EEAG  253 (278)
Q Consensus       250 ~~~~  253 (278)
                      ++..
T Consensus       216 ~~~~  219 (242)
T 2bka_A          216 RPRD  219 (242)
T ss_dssp             SCCC
T ss_pred             Cccc
Confidence            7654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=6.6e-26  Score=197.10  Aligned_cols=219  Identities=18%  Similarity=0.098  Sum_probs=164.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|||||+|+||++++++|+++|++|++++|..+. ..    +++.++.+|++|.+++.++++.     +++|+||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vi   79 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISD-----IKPDYIF   79 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHH-----HCCSEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHh-----cCCCEEE
Confidence            356899999999999999999999999999999997643 21    2567889999999999998875     3799999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------------CCCc
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------------LASH  161 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------~~~~  161 (278)
                      ||||....     +.+.+++++.+++|+.++.++++++ +.+.  + .+++|++||...+...             +...
T Consensus        80 h~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~  150 (321)
T 2pk3_A           80 HLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSEENQLRPMS  150 (321)
T ss_dssp             ECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCS
T ss_pred             EcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCC
Confidence            99996521     1222467899999999999999998 5552  2 5799999999766432             3456


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHh---h--cC------C
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVR---D--SG------S  228 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~---~--~~------~  228 (278)
                      .|+.+|++.+.+++.++.++   |++++.++||.+.++....  ..          +.-......   .  ..      .
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~  217 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVT----------QDFAKQIVDIEMEKQEPIIKVGNL  217 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHH----------HHHHHHHHHHHTTSSCSEEEESCS
T ss_pred             ccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchH----------HHHHHHHHHHhcCCCCCeEEeCCC
Confidence            89999999999999999875   8999999999988775321  00          000111111   1  00      0


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+..++++++|+|++++++++..   .+|+.+++++|...
T Consensus       218 ~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          218 EAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             SCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             CcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            12345789999999999999754   46899999998654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=3e-25  Score=194.32  Aligned_cols=222  Identities=13%  Similarity=0.041  Sum_probs=162.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh------hCCeEE-EecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST------IGGRYI-HCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~------~~~~~~-~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++++|||||+|+||++++++|+++|++|++++|+.+....+.+.      .++.++ .+|++|.++++++++    
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT----
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc----
Confidence            346789999999999999999999999999999999987665544332      245677 799999988777664    


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCC------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGL------  158 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~------  158 (278)
                         ++|+||||||.....        +++++.+++|+.++.++++++.+.    .+.+++|++||..++. +.+      
T Consensus        83 ---~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~  147 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             ---TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             ---CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhC----CCCcEEEEeccHHHhcCCCCCCCCcc
Confidence               799999999975321        246789999999999999988752    2257999999988763 211      


Q ss_pred             ------------------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH---------HH
Q 023708          159 ------------------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN---------AY  205 (278)
Q Consensus       159 ------------------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~---------~~  205 (278)
                                              +...|+.||++.+.+++.++.++.. +++++.++||.+.++....         ..
T Consensus       148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~  226 (342)
T 1y1p_A          148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence                                    1247999999999999999999876 8999999999988775321         11


Q ss_pred             HhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          206 RKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      .....  +....    .....   +.+.+++++|+|++++.++...  ..+|+.+..+|+
T Consensus       227 ~~~~~--~~~~~----~~~~~---~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~  275 (342)
T 1y1p_A          227 MSLFN--GEVSP----ALALM---PPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             HHHHT--TCCCH----HHHTC---CSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             HHHHc--CCCcc----ccccC---CcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCC
Confidence            11000  00000    01110   2356789999999999998643  456766666664

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=1.3e-25  Score=196.39  Aligned_cols=221  Identities=15%  Similarity=0.099  Sum_probs=162.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecch-----HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG--AHIVIADILD-----ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +++++|||||+|+||++++++|+++|  ++|++++|..     +...++....++.++.+|++|.+++++++.       
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR-------   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh-------
Confidence            34679999999999999999999997  8999998753     111111111246788999999999888873       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------CC
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------GG  157 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~  157 (278)
                      ++|+||||||...     .+.+.+++++.+++|+.++.++++++.+.  . . .+++|++||...+.           +.
T Consensus        75 ~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~-~~~iv~~SS~~vyg~~~~~~~~E~~~~  145 (336)
T 2hun_A           75 KVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE--N-P-EVRFVHVSTDEVYGDILKGSFTENDRL  145 (336)
T ss_dssp             TCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T-TSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred             CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C-CcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence            7999999999642     12234567889999999999999999886  1 1 46999999987543           23


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHhhcC-C-----C
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSG-S-----L  229 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-----~  229 (278)
                      .....|+.+|++.+.+++.++.++   +++++.++||.+.++....  ..          +........... +     .
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~  212 (336)
T 2hun_A          146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLI----------PKTIIRASLGLKIPIYGTGK  212 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHH----------HHHHHHHHTTCCEEEETC--
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchH----------HHHHHHHHcCCCceEeCCCC
Confidence            445689999999999999999886   7999999999998875321  10          111111111100 0     0


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ...++++++|+|+++++++++.   .+|+.++++||...
T Consensus       213 ~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          213 NVRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             -CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             ceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            1245788999999999998653   47899999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=7.3e-25  Score=192.05  Aligned_cols=224  Identities=20%  Similarity=0.151  Sum_probs=160.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH--HHHhh---hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA--ALAST---IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~--~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+...  .+...   .++.++.+|++|.+++.++++.+     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            45789999999999999999999999999999998754321  12111   24677889999999999998765     6


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-----------cCCC
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-----------MGGL  158 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~~~~  158 (278)
                      +|+||||||...     .+.+.+++++.+++|+.++.++++++.+.    +..+++|++||...+           .+..
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           76 PDEVYNLAAQSF-----VGVSFEQPILTAEVDAIGVLRILEALRTV----KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             CSEEEECCCCCC-----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCcc-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            999999999642     12223568899999999999999998853    113799999998754           2334


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHC---CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc------CCC
Q 023708          159 ASHAYSLSKEAIIGLARSTACELG---KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS------GSL  229 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  229 (278)
                      +...|+.+|++.+.+++.++.++.   ..++.++.+.||...+.+......           .........      ...
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  215 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITY-----------SLARIKYGLQDKLVLGNL  215 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHH-----------HHHHHHTTSCSCEEESCT
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHH-----------HHHHHHcCCCCeeeeCCC
Confidence            556899999999999999999875   334567778899887765432210           000000000      000


Q ss_pred             C-CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          230 L-RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       230 ~-~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      . ...+++++|+|++++++++...    +..+++.+|..
T Consensus       216 ~~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          216 NAKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             TCEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             CceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCC
Confidence            1 1248899999999999997553    25677766654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=7.8e-25  Score=192.12  Aligned_cols=226  Identities=17%  Similarity=0.140  Sum_probs=164.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--H---HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILD--E---LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |++|||||+|+||++++++|+++|++|++++|..  .   ....+....++.++.+|++|.++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999998731  1   1222222224778999999999999988752     6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------------  156 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------  156 (278)
                      ||||||...     .+.+.+++++.+++|+.++.++++++.+...    .+++|++||...+..                
T Consensus        77 vih~A~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVA-----MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            999999642     1223467889999999999999999988642    369999999876431                


Q ss_pred             -----------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhh
Q 023708          157 -----------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD  225 (278)
Q Consensus       157 -----------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                                 ......|+.+|++.+.+++.++.++   |++++.++||.+.++......     ....-+.........
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~  219 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATY-----DQGWVGWFCQKAVEI  219 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBT-----TBCHHHHHHHHHHHH
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCC-----cCcHHHHHHHHHHhC
Confidence                       2345689999999999999999886   799999999999887532100     000000111111111


Q ss_pred             cC----CC-------CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          226 SG----SL-------LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       226 ~~----~~-------~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ..    +.       ....++.++|+|+++++++.. ....+|+.++++||.
T Consensus       220 ~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          220 KNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             cccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            10    10       012367999999999999863 235689999999986

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=6.2e-26  Score=189.31  Aligned_cols=206  Identities=14%  Similarity=0.055  Sum_probs=138.6

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++....+..|++|||||+|+||++++++|+++| ++|++++|+.+...++.. .++.++.+|++|.++++++++    
T Consensus        13 ~~~~~~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~----   87 (236)
T 3qvo_A           13 GRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQ----   87 (236)
T ss_dssp             ---------CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHT----
T ss_pred             cccceeecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhc----
Confidence            34445556667999999999999999999999999 899999998765433222 246788999999999998876    


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch---
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA---  162 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~---  162 (278)
                         ++|+||||+|..    .                   ....++.+++.+.+.+ .++||++||..++.+.+....   
T Consensus        88 ---~~D~vv~~a~~~----~-------------------~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~  140 (236)
T 3qvo_A           88 ---GQDIVYANLTGE----D-------------------LDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWN  140 (236)
T ss_dssp             ---TCSEEEEECCST----T-------------------HHHHHHHHHHHHHHTT-CCEEEEECCCCC------------
T ss_pred             ---CCCEEEEcCCCC----c-------------------hhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccch
Confidence               689999999842    0                   0123567888887755 689999999888765543211   


Q ss_pred             ------hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCC
Q 023708          163 ------YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS  236 (278)
Q Consensus       163 ------Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
                            +...+...       ...+.+.|++++.|+||.+.++.....    ..            . .....+.+++++
T Consensus       141 ~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~----~~------------~-~~~~~~~~~~i~  196 (236)
T 3qvo_A          141 NAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDY----EL------------T-SRNEPFKGTIVS  196 (236)
T ss_dssp             ----CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCC----EE------------E-CTTSCCSCSEEE
T ss_pred             hhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcce----EE------------e-ccCCCCCCcEEC
Confidence                  11222222       122346799999999999977643210    00            0 000112367889


Q ss_pred             HHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          237 IEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+|+|++++++++++..+. |+.+.++++.+..
T Consensus       197 ~~DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          197 RKSVAALITDIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHHHHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHHHHHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence            9999999999999876666 8999999988765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=3e-25  Score=194.55  Aligned_cols=234  Identities=16%  Similarity=0.091  Sum_probs=162.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH----HHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA----LAST--IGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~----~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++++|||||+|+||++++++|+++|++|++++|..+...+    +...  .++.++.+|++|.+++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            35799999999999999999999999999999886433222    2221  2577899999999999999875     47


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CC
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GL  158 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~  158 (278)
                      +|+||||||....     ....++..+.+++|+.++.++++++.    +.+ .+++|++||...+..           ..
T Consensus        79 ~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVMR----ERA-VKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHHH----hCC-CCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999997522     11234556789999999998877654    333 579999999876522           22


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCC--CCH-HHHHHHHhh-cCC------
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD--MKP-EEVCKMVRD-SGS------  228 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~-~~~~~~~~~-~~~------  228 (278)
                      ....|+.+|++.+.+++.++.++.  +++++.++|+.+.++.....+...  ...  ... ..+...... ...      
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGED--PAGIPNNLMPYVAQVAVGKLEKLRVFGS  224 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCC--CSSSCSSHHHHHHHHHHTSSSCEEEECS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCC--cccCccchHHHHHHHHhcCCCceEEeCC
Confidence            345899999999999999998874  699999999877655321000000  000  000 011111111 000      


Q ss_pred             -------CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 -------LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 -------~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                             .....+++++|+|+++++++........|+.+++.+|..+
T Consensus       225 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          225 DYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             CSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             ccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                   0123477899999999999865323456899999988754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=4.2e-25  Score=195.06  Aligned_cols=224  Identities=18%  Similarity=0.112  Sum_probs=165.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchH--HHHHHH---hhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAEN-GAHIVIADILDE--LGAALA---STIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~--~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|||||+|+||++++++|++. |++|++++|...  ..+.+.   ...++.++.+|++|.+++.+++++.     ++|+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCE
Confidence            4999999999999999999998 799999987531  111111   1124678899999999999988752     7999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC----CCcEEEEecCchhhc-------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ----RKGSIICTSSSAAIM-------------  155 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~vsS~~~~~-------------  155 (278)
                      ||||||...     .+.+.+++++.+++|+.++.++++++.+.|..-+    ..++||++||...+.             
T Consensus        77 vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  151 (361)
T 1kew_A           77 VMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccccc
Confidence            999999642     1233467788999999999999999999875311    124999999976542             


Q ss_pred             --------CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHhh
Q 023708          156 --------GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRD  225 (278)
Q Consensus       156 --------~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~  225 (278)
                              +......|+.+|++.+.+++.++.++   +++++.++||.+.++....  ..          +.........
T Consensus       152 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~----------~~~~~~~~~~  218 (361)
T 1kew_A          152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLI----------PLVILNALEG  218 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHH----------HHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHH----------HHHHHHHHcC
Confidence                    12345689999999999999999887   7999999999998876421  11          1111111111


Q ss_pred             cC-C-----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          226 SG-S-----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       226 ~~-~-----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .. .     ....++++++|+|+++++++++.   .+|+.++++||..+
T Consensus       219 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          219 KPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence            10 0     01245788999999999999654   47899999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.3e-24  Score=189.17  Aligned_cols=227  Identities=15%  Similarity=0.085  Sum_probs=166.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS----TIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+....+.+    ..++.++.+|++|.+++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            567899999999999999999999999999999987543332222    125778999999999999988764     69


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------CCC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------GGL  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~  158 (278)
                      |+||||||..     ..+.+.+++++.+++|+.++.++++++.+.    +..+++|++||...+.            +..
T Consensus        82 d~vih~A~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQP-----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCC-----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCc-----ccccchhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            9999999852     123345678899999999999999998763    1257999999987542            223


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHC------CCCcEEEEecCCCCCChhhH---HHHHhhhccCCCCHHHHHHHHhhcCC-
Q 023708          159 ASHAYSLSKEAIIGLARSTACELG------KHGIRVNCISPHGVPSEMLV---NAYRKYLGKADMKPEEVCKMVRDSGS-  228 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~------~~~i~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-  228 (278)
                      ....|+.+|++.+.+++.++.++.      +.|++++.++||.+.++...   ..+          +.-.......... 
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~----------~~~~~~~~~g~~~~  222 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIV----------PDILRAFEQSQPVI  222 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHH----------HHHHHHHHTTCCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHH----------HHHHHHHhcCCCEE
Confidence            456899999999999999999885      45899999999999876431   011          0111111111100 


Q ss_pred             C----CCCCCCCHHHHHHHHHHhccCC--CCCceeeEEeecCC
Q 023708          229 L----LRGRSASIEDVAQAALFLASEE--AGFITAHNLVIDGG  265 (278)
Q Consensus       229 ~----~~~~~~~~edva~~~~~l~s~~--~~~~tG~~i~~dgG  265 (278)
                      +    ....++.++|+|++++.++...  .....|+.+++.+|
T Consensus       223 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          223 IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            0    1235789999999999988531  11234678888764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=9e-24  Score=186.12  Aligned_cols=230  Identities=19%  Similarity=0.116  Sum_probs=167.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----HHHHHHHh------hhCCeEEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD----ELGAALAS------TIGGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      +++++++|||||+|+||++++++|+++|++|++++|..    +....+.+      ..++.++.+|++|.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            36778999999999999999999999999999999854    23333322      1356789999999998888775  


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----  158 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----  158 (278)
                           ++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.    + .+++|++||...+.+.+     
T Consensus       102 -----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             -----TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCCCC
Confidence                 799999999964211     134678899999999999999988753    2 57999999988765432     


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-C--
Q 023708          159 ------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-L--  229 (278)
Q Consensus       159 ------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--  229 (278)
                            ....|+.+|++.+.+++.++.++   +++++.++||.+.++......    ......+............ +  
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g  239 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNG----AYAAVIPKWTSSMIQGDDVYING  239 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCS----TTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCc----chhhHHHHHHHHHHCCCCcEEeC
Confidence                  35689999999999999999886   799999999999877532100    0000001111112211110 0  


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 ---LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ---~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                         ....++.++|+|+++++++... ....|+.+++.+|...
T Consensus       240 ~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          240 DGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence               1135789999999999988642 2457899999988653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=5.8e-24  Score=172.95  Aligned_cols=198  Identities=14%  Similarity=0.068  Sum_probs=148.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++++||||+|+||++++++|+++|++|++++|+.+...... ..++.++.+|++|.+++.++++       ++|+||||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   74 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-------GQDAVIVL   74 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-------TCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHc-------CCCEEEEC
Confidence            478999999999999999999999999999999875432211 2257789999999998888775       58999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----CCchhhhhHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----ASHAYSLSKEAIIG  172 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~Y~~sK~a~~~  172 (278)
                      ||.....    +.        .++|+.++..+++++.+.    + .+++|++||...+...+    ....|+.+|++++.
T Consensus        75 a~~~~~~----~~--------~~~n~~~~~~~~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~  137 (206)
T 1hdo_A           75 LGTRNDL----SP--------TTVMSEGARNIVAAMKAH----G-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHK  137 (206)
T ss_dssp             CCCTTCC----SC--------CCHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHH
T ss_pred             ccCCCCC----Cc--------cchHHHHHHHHHHHHHHh----C-CCeEEEEeeeeeccCcccccccchhHHHHHHHHHH
Confidence            9965321    11        147888888888776653    2 56999999998765544    45689999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCC-CChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGV-PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++.       .+++++.++||.+ +++.....    ..              .....|.+++++++|+|+++++++.++
T Consensus       138 ~~~~-------~~i~~~~lrp~~~~~~~~~~~~----~~--------------~~~~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          138 VLRE-------SGLKYVAVMPPHIGDQPLTGAY----TV--------------TLDGRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             HHHH-------TCSEEEEECCSEEECCCCCSCC----EE--------------ESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             HHHh-------CCCCEEEEeCCcccCCCCCcce----Ee--------------cccCCCCCCccCHHHHHHHHHHHhcCc
Confidence            8843       5899999999998 33321100    00              000112146889999999999999764


Q ss_pred             CCCceeeEEeecCCc
Q 023708          252 AGFITAHNLVIDGGY  266 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~  266 (278)
                        ..+|+.++++||+
T Consensus       193 --~~~g~~~~i~~g~  205 (206)
T 1hdo_A          193 --EYDGHSTYPSHQY  205 (206)
T ss_dssp             --TTTTCEEEEECCC
T ss_pred             --cccccceeeeccc
Confidence              3789999999986

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=7.1e-25  Score=183.84  Aligned_cols=216  Identities=13%  Similarity=0.049  Sum_probs=157.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +++|++|||||+|+||++++++|+++  |++|++++|+.+....+  ..++.++.+|++|.+++.++++       ++|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~-------~~d~   72 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQ-------GIDA   72 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHc-------CCCE
Confidence            35689999999999999999999999  89999999987665544  2246789999999999988875       6999


Q ss_pred             EEECCccCCCCCC--------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch--
Q 023708           93 MFNNAGISGSGGS--------ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA--  162 (278)
Q Consensus        93 li~nag~~~~~~~--------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~--  162 (278)
                      ||||||.......        ..+...+++.+.+++|+.++..+++++.+.    + .+++|++||..+..+......  
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~  147 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGTNPDHPLNKLG  147 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTTCTTCGGGGGG
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCccCCCCCCcccccc
Confidence            9999997532110        112223455678899999999988877653    2 569999999987654443333  


Q ss_pred             ---hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          163 ---YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       163 ---Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                         |+.+|++++.+++.       .|++++.++||.+.++....  .......  ..    ....     ...++.+++|
T Consensus       148 ~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~--~~~~~~~--~~----~~~~-----~~~~~~~~~D  207 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGV--RELLVGK--DD----ELLQ-----TDTKTVPRAD  207 (253)
T ss_dssp             GCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSS--SCEEEES--TT----GGGG-----SSCCEEEHHH
T ss_pred             chhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcch--hhhhccC--Cc----CCcC-----CCCcEEcHHH
Confidence               55699999988753       58999999999998775311  0000000  00    0000     1245789999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +|+++++++..+.  .+|+.+++++|.
T Consensus       208 va~~~~~~~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          208 VAEVCIQALLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred             HHHHHHHHHcCcc--ccCCEEEecCCC
Confidence            9999999997543  578999999864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.91  E-value=5.7e-25  Score=181.23  Aligned_cols=192  Identities=18%  Similarity=0.174  Sum_probs=152.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++|||||+|+||++++++|+++|++|++++|+.+.....   .++.++.+|++| .+++.++++       ++|+|||||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLH-------GMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTT-------TCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHc-------CCCEEEECC
Confidence            599999999999999999999999999999987654322   357789999999 888887765       699999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC-------CchhhhhHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA-------SHAYSLSKEAI  170 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------~~~Y~~sK~a~  170 (278)
                      |....             +.+++|+.++..+++++..    .+ .+++|++||..+..+.+.       ...|+.+|++.
T Consensus        72 g~~~~-------------~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~  133 (219)
T 3dqp_A           72 GSGGK-------------SLLKVDLYGAVKLMQAAEK----AE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFA  133 (219)
T ss_dssp             CCTTS-------------SCCCCCCHHHHHHHHHHHH----TT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHH
T ss_pred             cCCCC-------------CcEeEeHHHHHHHHHHHHH----hC-CCEEEEECcccccCCCcccccccccccHHHHHHHHH
Confidence            97531             2678899999998887743    22 579999999988776655       67899999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.+++      ...+++++.++||.+.++.....+         ..       .    .....+++++|+|+++++++..
T Consensus       134 e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~---------~~-------~----~~~~~~i~~~Dva~~i~~~l~~  187 (219)
T 3dqp_A          134 DLYLT------KETNLDYTIIQPGALTEEEATGLI---------DI-------N----DEVSASNTIGDVADTIKELVMT  187 (219)
T ss_dssp             HHHHH------HSCCCEEEEEEECSEECSCCCSEE---------EE-------S----SSCCCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHH------hccCCcEEEEeCceEecCCCCCcc---------cc-------C----CCcCCcccHHHHHHHHHHHHhC
Confidence            99886      356899999999999776432111         00       0    1346788999999999999976


Q ss_pred             CCCCceeeEEeecCCc
Q 023708          251 EAGFITAHNLVIDGGY  266 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~  266 (278)
                      +.  ..|+.+++++|.
T Consensus       188 ~~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          188 DH--SIGKVISMHNGK  201 (219)
T ss_dssp             GG--GTTEEEEEEECS
T ss_pred             cc--ccCcEEEeCCCC
Confidence            53  458999998774

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=5.3e-24  Score=186.57  Aligned_cols=212  Identities=16%  Similarity=0.090  Sum_probs=153.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||+|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+++.++++       ++|+|||+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   85 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDHAGLERALR-------GLDGVIFSA   85 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCHHHHHHHTT-------TCSEEEEC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCHHHHHHHHc-------CCCEEEECC
Confidence            47999999999999999999999999999999765433222 2367889999999998888775       699999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC----------------Cc
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA----------------SH  161 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----------------~~  161 (278)
                      |...       ...+++++.+++|+.++.++++++.+.    + .+++|++||...+...+.                ..
T Consensus        86 ~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~  153 (342)
T 2x4g_A           86 GYYP-------SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKS  153 (342)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSC
T ss_pred             ccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccC
Confidence            9642       123677889999999999999998875    2 469999999988755443                66


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh-HHHHHhhhccCCCCHHHHHHHHhhcCC-C--CCCCCCCH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML-VNAYRKYLGKADMKPEEVCKMVRDSGS-L--LRGRSASI  237 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  237 (278)
                      .|+.+|++.+.+++.++.   . |++++.++||.+.++.. ..         . .+............ +  ....++++
T Consensus       154 ~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~i~v  219 (342)
T 2x4g_A          154 SYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGP---------T-TGRVITAIGNGEMTHYVAGQRNVIDA  219 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSC---------S-TTHHHHHHHTTCCCEEECCEEEEEEH
T ss_pred             hHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccc---------c-HHHHHHHHHcCCCccccCCCcceeeH
Confidence            899999999999999876   3 89999999999987643 10         0 01111111111110 0  11236799


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      +|+|+++++++.....   |+.+++.||.
T Consensus       220 ~Dva~~~~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          220 AEAGRGLLMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHHHHHHHHhCCCC---CceEEEcCCc
Confidence            9999999999975532   8899999886

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=5.4e-24  Score=188.29  Aligned_cols=224  Identities=19%  Similarity=0.165  Sum_probs=153.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHH--cCCeEEEEecchHHHH------------HHHhhhCCeEEEecCCCHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAE--NGAHIVIADILDELGA------------ALASTIGGRYIHCDVTKEEDVES   78 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~--~g~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~D~~~~~~i~~   78 (278)
                      ++++++++|||||+|+||++++++|++  +|++|++++|......            ......++.++.+|++|.+++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            567899999999999999999999999  9999999998643100            00111236789999999998888


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC
Q 023708           79 AVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL  158 (278)
Q Consensus        79 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~  158 (278)
                      +      ...++|+||||||....       +.++++..+++|+.++.++++++...      ..++|++||...+....
T Consensus        86 ~------~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~~------~~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIARSK------KAKVIYASSAGVYGNTK  146 (362)
T ss_dssp             H------TTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHHHT------TCEEEEEEEGGGGCSCC
T ss_pred             h------hccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEeCcHHHhCCCC
Confidence            6      23589999999995421       23567899999999999999988432      34599999976653322


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC
Q 023708          159 ----------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS  228 (278)
Q Consensus       159 ----------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                                ....|+.+|++.+.+++.++.+     +++..++|+.+..+.......    .....+............
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~----~~~~~~~~~~~~~~~~~~  217 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEK----TASMVLQLALGAMAFKEV  217 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGG----GSCHHHHHHHHHHTTSEE
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCc----chhHHHHHHHHHHhCCCe
Confidence                      2346999999999999988765     556666666555443211000    000001111111111100


Q ss_pred             ------CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 ------LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ------~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                            .....++.++|+|+++++++..+   .+| .+++.+|...
T Consensus       218 ~~~~~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~~  259 (362)
T 3sxp_A          218 KLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQAR  259 (362)
T ss_dssp             ECSGGGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCEE
T ss_pred             EEECCCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCCc
Confidence                  01235778999999999999765   368 9999988754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=4.3e-23  Score=181.29  Aligned_cols=226  Identities=12%  Similarity=0.069  Sum_probs=157.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..++++|++|||||+|+||++++++|+++|++|++++|..+.       .++.++.+|++|.+++.++++       ++|
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-------GVS   79 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-------TCS
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-------CCC
Confidence            457788999999999999999999999999999999998643       357789999999999888876       799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-------------CC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-------------GL  158 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~  158 (278)
                      +|||+|+....       +.++++..+++|+.++.++++++...    + .+++|++||...+..             ..
T Consensus        80 ~vih~A~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~  147 (347)
T 4id9_A           80 AVLHLGAFMSW-------APADRDRMFAVNVEGTRRLLDAASAA----G-VRRFVFASSGEVYPENRPEFLPVTEDHPLC  147 (347)
T ss_dssp             EEEECCCCCCS-------SGGGHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCC
T ss_pred             EEEECCcccCc-------chhhHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHHhCCCCCCCCCcCCCCCCC
Confidence            99999986522       22455899999999999999987652    2 569999999766533             23


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCC-------------ChhhHHHHH--hhhc-cCCCCHHHHHHH
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVP-------------SEMLVNAYR--KYLG-KADMKPEEVCKM  222 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~-------------t~~~~~~~~--~~~~-~~~~~~~~~~~~  222 (278)
                      ....|+.+|.+.+.+++.++.+.   +++++.++|+.+.             .+.......  .... ....-+.-....
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 4id9_A          148 PNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSR  224 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHH
Confidence            45689999999999999998874   8999999999887             443211000  0000 000000001111


Q ss_pred             HhhcCC------CCCCCC----CCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          223 VRDSGS------LLRGRS----ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       223 ~~~~~~------~~~~~~----~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ......      .....+    +.++|+|++++.++....  ..|+.+++.+|...
T Consensus       225 ~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          225 DIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             CCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             HcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence            111000      012234    789999999999997653  44889999988654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=8.8e-24  Score=183.02  Aligned_cols=221  Identities=18%  Similarity=0.142  Sum_probs=156.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|+++|++|++++|..+....... .++.++.+|++|.+++++++++.     ++|+|||+|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~   75 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAA   75 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhc-----CCCEEEECcc
Confidence            69999999999999999999999999999884321110000 24668899999999999888642     7999999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------------CCCchhhh
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------------LASHAYSL  165 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------~~~~~Y~~  165 (278)
                      ....     ..+.++++..+++|+.+++++++++.+.    + .+++|++||..+..+.             .+...|+.
T Consensus        76 ~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~  145 (311)
T 2p5y_A           76 QASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQY----G-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAA  145 (311)
T ss_dssp             CCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHH
T ss_pred             ccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHH
Confidence            6421     2334678889999999999999987642    2 5799999998332211             23568999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC-----------CCCCCCC
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG-----------SLLRGRS  234 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  234 (278)
                      ||++++.+++.++.++   |++++.++||.+.++......     ....-+...........           ....+.+
T Consensus       146 sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             HHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            9999999999998886   799999999988876421000     00000000111111110           0012457


Q ss_pred             CCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ++++|+|+++++++...     |+.+++.+|..+
T Consensus       218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             EEHHHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            78999999999998653     789999988754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=2.3e-23  Score=183.06  Aligned_cols=217  Identities=16%  Similarity=0.127  Sum_probs=160.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHH--HHHHHh--hhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAEN--GAHIVIADILDEL--GAALAS--TIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~--~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++|||||+|+||++++++|+++  |++|++++|....  ...+.+  ..++.++.+|++|.+++.++++       ++|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            68999999999999999999999  8999999885321  111111  1246788999999998888875       579


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc----------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM----------------  155 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------  155 (278)
                      +|||+||...     .+.+.++++..+++|+.++.++++++.+.    +  .++|++||...+.                
T Consensus        78 ~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           78 AIVHYAAESH-----NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             EEEECCSCCC-----HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             EEEECCcccC-----ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccccccccC
Confidence            9999999642     12234567889999999999999999876    2  3999999987542                


Q ss_pred             -------CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHhhc
Q 023708          156 -------GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVRDS  226 (278)
Q Consensus       156 -------~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
                             +......|+.+|++.+.+++.++.++   |++++.++||.+.++...  ...          +..........
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~----------~~~~~~~~~~~  213 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFI----------PRQITNILAGI  213 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHH----------HHHHHHHHHTC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchH----------HHHHHHHHcCC
Confidence                   22345689999999999999999887   799999999999877542  111          11111111111


Q ss_pred             C------CCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          227 G------SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       227 ~------~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .      ......+++++|+|+++++++++.   .+|+.+++++|...
T Consensus       214 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          214 KPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             CceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            0      012246789999999999999654   47899999998643

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=1.7e-23  Score=183.19  Aligned_cols=215  Identities=16%  Similarity=0.084  Sum_probs=150.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-hCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-IGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..++++++|||||+|+||++++++|+++|++|++++|......+.... .++.++.+|++|.++++++++.     +++|
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~D   91 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD-----LQPD   91 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH-----HCCS
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc-----cCCc
Confidence            356778999999999999999999999999999999864321111111 2467889999999999988875     2699


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc----C---------CC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM----G---------GL  158 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----~---------~~  158 (278)
                      +||||||.....      +.++++  +++|+.++.++++++.+.    + .+++|++||...+.    .         .+
T Consensus        92 ~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p  158 (333)
T 2q1w_A           92 AVVHTAASYKDP------DDWYND--TLTNCVGGSNVVQAAKKN----N-VGRFVYFQTALCYGVKPIQQPVRLDHPRNP  158 (333)
T ss_dssp             EEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGCSCCCSSSBCTTSCCCC
T ss_pred             EEEECceecCCC------ccCChH--HHHHHHHHHHHHHHHHHh----C-CCEEEEECcHHHhCCCcccCCCCcCCCCCC
Confidence            999999975321      224555  999999999999998762    2 57999999987764    2         22


Q ss_pred             CCchhhhhHHHHHHHHHH-HHHHHCCCCcEEEEecCCCCCChh-----hHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          159 ASHAYSLSKEAIIGLARS-TACELGKHGIRVNCISPHGVPSEM-----LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~-l~~e~~~~~i~v~~v~pG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      ....|+.+|++.+.+++. ++        ++..++|+.+..+.     .......... ..       ....   ..+..
T Consensus       159 ~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~-~~-------~~~~---~~~~~  219 (333)
T 2q1w_A          159 ANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSE-GK-------KCFV---TKARR  219 (333)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHT-TC-------CCEE---EECEE
T ss_pred             CCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHc-CC-------eeeC---CCceE
Confidence            226899999999999987 54        45556665544432     1111111100 00       0000   11235


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++.++|+|++++++++...    |+.+++++|..+
T Consensus       220 ~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          220 DFVFVKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             CEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             eeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            67899999999999997653    899999998754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.90  E-value=3.3e-23  Score=182.30  Aligned_cols=231  Identities=16%  Similarity=0.099  Sum_probs=166.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----HHHHHHHhh------hCCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD----ELGAALAST------IGGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +.++++++|||||+|+||++++++|+++|++|++++|..    +....+...      .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            446789999999999999999999999999999999843    333333322      357889999999998888776 


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----  158 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----  158 (278)
                            ++|+|||+||....     ....+++...+++|+.++.++++++...    + .+++|++||...+...+    
T Consensus       100 ------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~  163 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYGDHPALPK  163 (351)
T ss_dssp             ------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcCCCCCCCC
Confidence                  79999999996422     2234667889999999999999887653    2 56999999988764332    


Q ss_pred             -------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          159 -------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       159 -------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                             ....|+.+|.+.+.+++.++.++   |++++.++|+.+.++......    .....-+............   
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  236 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNG----AYAAVIPKWTAAMLKGDDVYIN  236 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCS----TTCCHHHHHHHHHHHTCCCEEE
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCc----chhhHHHHHHHHHHcCCCcEEe
Confidence                   24589999999999999999886   799999999988776421100    0000001111122221110   


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 ---LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ---~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                         .....++.++|+|++++.++... ....|+.+++.+|...
T Consensus       237 g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          237 GDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             SSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence               01235788999999999988652 2467899999888654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=5.5e-23  Score=182.99  Aligned_cols=223  Identities=14%  Similarity=0.055  Sum_probs=157.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHHhh-----h-CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALAST-----I-GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~-----~-~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      |++|||||+|+||++++++|+++|++|++++|..+.     ...+...     . ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999987542     1111111     1 4668899999999999988765   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc----------C
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM----------G  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----------~  156 (278)
                        ++|+||||||....     ..+.++++..+++|+.++.++++++.+...++++.+++|++||...+.          +
T Consensus       106 --~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              69999999996422     223467889999999999999999999876533357999999987653          2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEE------EecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC--
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVN------CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS--  228 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~------~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (278)
                      ......|+.+|++.+.+++.++.++   ++.+.      .+.||...+.... .+.          ............  
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~-~~~----------~~~~~~~~g~~~~~  244 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTR-KIT----------RALGRIKVGLQTKL  244 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHH-HHH----------HHHHHHHHTSCCCE
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhH-HHH----------HHHHHHHcCCCCeE
Confidence            3345689999999999999999887   34333      3345543322111 000          001111111000  


Q ss_pred             -----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 -----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 -----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                           .....++.++|+|+++++++....    ++.+++.+|..+
T Consensus       245 ~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          245 FLGNLQASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             EESCTTCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             EeCCCCceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence                 122457899999999999997543    467888888643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=6.1e-23  Score=180.22  Aligned_cols=225  Identities=14%  Similarity=0.066  Sum_probs=157.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchH--HHHHH---HhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENG--AHIVIADILDE--LGAAL---ASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~--~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +.++++++|||||+|+||++++++|+++|  ++|++.+|...  ....+   ....++.++.+|++|.+++.++++..  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER--   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc--
Confidence            34678999999999999999999999999  67777766431  11111   11125678999999999999998753  


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-------  158 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-------  158 (278)
                         ++|+|||+||.....     ...++++..+++|+.++..+++++.+.    + .+++|++||...+...+       
T Consensus        98 ---~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~~~~~~~~~~E  164 (346)
T 4egb_A           98 ---DVQVIVNFAAESHVD-----RSIENPIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYGSLGKTGRFTE  164 (346)
T ss_dssp             ---TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred             ---CCCEEEECCcccchh-----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhCCCCcCCCcCC
Confidence               699999999975322     234677889999999999999887653    2 56899999987654331       


Q ss_pred             -----CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          159 -----ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       159 -----~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                           ....|+.+|.+.+.+++.++.++   +++++.++||.+.++...  ...          +............   
T Consensus       165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~  231 (346)
T 4egb_A          165 ETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLI----------PLMVTNALEGKKLPLY  231 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHH----------HHHHHHHHTTCCCEEE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchH----------HHHHHHHHcCCCceee
Confidence                 23689999999999999998886   799999999988766431  010          0111111111100   


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 ---LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ---~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                         .....++.++|+|+++++++....   .|+.+++.+|..+
T Consensus       232 ~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          232 GDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             TTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence               011345779999999999997653   7899999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=5.5e-24  Score=188.78  Aligned_cols=233  Identities=16%  Similarity=0.158  Sum_probs=164.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCC-CHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVT-KEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~i   90 (278)
                      ..|+++++|||||+|+||++++++|+++ |++|++++|..+....+....++.++.+|++ |.+++.++++       ++
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-------~~   92 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-------KC   92 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-------cC
Confidence            3467899999999999999999999998 9999999998765554444446789999999 9999988886       59


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------------
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------------  157 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------  157 (278)
                      |+|||+||.....     ...++..+.+++|+.++.++++++...    +  +++|++||...+...             
T Consensus        93 d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~  161 (372)
T 3slg_A           93 DVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCADEQFDPDASALT  161 (372)
T ss_dssp             SEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCCSSBCTTTCCEE
T ss_pred             CEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCCCCCCccccccc
Confidence            9999999975321     123566788999999999998887654    2  599999997665321             


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC----
Q 023708          158 -----LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS----  228 (278)
Q Consensus       158 -----~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  228 (278)
                           .....|+.+|.+.+.+++.++.+    ++++..++|+.+.++.....+.........-+.-..........    
T Consensus       162 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (372)
T 3slg_A          162 YGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVD  237 (372)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGG
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeC
Confidence                 12237999999999999988765    79999999999876642110000000000000011111111100    


Q ss_pred             --CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecC-Ccc
Q 023708          229 --LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDG-GYT  267 (278)
Q Consensus       229 --~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dg-G~~  267 (278)
                        .....++.++|+|++++.++........|+.+++.+ |..
T Consensus       238 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          238 GGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             CCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence              012357899999999999997665556789999998 444

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=4e-24  Score=185.07  Aligned_cols=219  Identities=17%  Similarity=0.140  Sum_probs=159.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||+|+||++++++|+++|++|++++|..+...... ..++.++.+|++|.+ +.++++       . |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIK-------G-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCC-------C-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcC-------C-CEEEECC
Confidence            46999999999999999999999999999998654322221 235778999999987 655543       3 9999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~s  166 (278)
                      |...     ...+.++++..+++|+.++.++++++...    + .+++|++||...+..           ..+...|+.+
T Consensus        71 ~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~s  140 (312)
T 3ko8_A           71 ANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT----G-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAA  140 (312)
T ss_dssp             SSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             CCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHH
Confidence            9532     23344667889999999999999988543    2 569999999887632           2345689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-------CCCCCCCCHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-------LLRGRSASIED  239 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ed  239 (278)
                      |++.+.+++.++.++   |++++.++||.+.++......         .+............       .....+++++|
T Consensus       141 K~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  208 (312)
T 3ko8_A          141 KAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV---------IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRD  208 (312)
T ss_dssp             HHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH---------HHHHHHHHHHCTTEEEEC----CEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh---------HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHH
Confidence            999999999999987   899999999999887532100         00111111111000       01235678999


Q ss_pred             HHHHHHHhccC-CCCCceeeEEeecCCccc
Q 023708          240 VAQAALFLASE-EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       240 va~~~~~l~s~-~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+++++++.. ......|+.+++.+|...
T Consensus       209 va~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          209 AVEATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence            99999999975 223467899999988654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.90  E-value=1.7e-23  Score=186.24  Aligned_cols=224  Identities=17%  Similarity=0.119  Sum_probs=159.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHH-HHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAA-LASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ...++++++|||||+|+||++++++|+++| ++|++++|..+...+ +....++.++.+|++|.++++++++       +
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~-------~   99 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD-------E   99 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh-------C
Confidence            345788999999999999999999999999 999999987543211 1112246788999999988777654       7


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------------  155 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------------  155 (278)
                      +|+|||+||....     ..+.+++++.+++|+.++.++++++..    ....+++|++||...+.              
T Consensus       100 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  170 (377)
T 2q1s_A          100 YDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATEETD  170 (377)
T ss_dssp             CSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------CCCC
T ss_pred             CCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCcccccc
Confidence            9999999986421     123356788999999999998887742    21256999999976431              


Q ss_pred             --CC-CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh---------H------HHHHhhhccCCCCHH
Q 023708          156 --GG-LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML---------V------NAYRKYLGKADMKPE  217 (278)
Q Consensus       156 --~~-~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~---------~------~~~~~~~~~~~~~~~  217 (278)
                        +. .....|+.+|++.+.+++.++.++   +++++.++||.+.++..         .      ...          +.
T Consensus       171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~----------~~  237 (377)
T 2q1s_A          171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVT----------PT  237 (377)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHH----------HH
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHH----------HH
Confidence              21 345689999999999999998876   79999999999877653         1      111          01


Q ss_pred             HHHHHHhhcCC-C-----CCCCCCCHHHHHHH-HHHhccCCCCCceeeEEeecCCccc
Q 023708          218 EVCKMVRDSGS-L-----LRGRSASIEDVAQA-ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       218 ~~~~~~~~~~~-~-----~~~~~~~~edva~~-~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ........... .     ....++.++|+|++ ++.++..+.   +| .+++.+|...
T Consensus       238 ~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          238 FIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             HHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             HHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence            11111111110 0     12356789999999 999987643   68 9999988653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=9.8e-23  Score=181.42  Aligned_cols=226  Identities=15%  Similarity=0.103  Sum_probs=161.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+++++|||||+|+||++++++|+++|++|++++|..+..... ...++.++.+|++|.+++.++++       ++|+||
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~Vi   98 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTE-------GVDHVF   98 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHT-------TCSEEE
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhC-------CCCEEE
Confidence            3568999999999999999999999999999999875432211 12257789999999998888774       799999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------------C
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------------G  156 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------~  156 (278)
                      |+||....    .....+++++.+++|+.++.++++++.+.    + .+++|++||...+.                  +
T Consensus        99 h~A~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~  169 (379)
T 2c5a_A           99 NLAADMGG----MGFIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETTNVSLKESDAWP  169 (379)
T ss_dssp             ECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS
T ss_pred             ECceecCc----ccccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeehheeCCCCCCCccCCCcCcccCCC
Confidence            99996522    11112457889999999999999988642    2 56999999987643                  2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC--C-----C
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG--S-----L  229 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~  229 (278)
                      ......|+.+|++.+.+++.++.++   |++++.++||.+.++......    ......+...........  .     .
T Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (379)
T 2c5a_A          170 AEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKG----GREKAPAAFCRKAQTSTDRFEMWGDGL  242 (379)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSS----SCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCccc----ccccHHHHHHHHHHhCCCceEEeCCCC
Confidence            2335689999999999999998876   799999999999877421100    000000011111111110  0     0


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       230 ~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ....+++++|+|+++++++..+    .|+.+++.+|..+
T Consensus       243 ~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          243 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             eeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            1235788999999999999654    4678899887653

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.90  E-value=4.3e-23  Score=180.84  Aligned_cols=228  Identities=15%  Similarity=0.097  Sum_probs=157.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++|||||+|+||++++++|+++ |++|++++|+.+....+....++.++.+|++| .+.++++++       ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-------HCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-------CCCEEEE
Confidence            46999999999999999999998 89999999986554333233356789999998 456766665       5899999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC----------------
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA----------------  159 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----------------  159 (278)
                      +||.....     ...+++++.+++|+.++.++++++.+.      .+++|++||...+...+.                
T Consensus        74 ~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~  142 (345)
T 2bll_A           74 LVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN  142 (345)
T ss_dssp             CBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT
T ss_pred             cccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHHh------CCeEEEEecHHHcCCCCCCCcCCcccccccCccc
Confidence            99964221     112467789999999999988887642      269999999876532211                


Q ss_pred             --CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------CCC
Q 023708          160 --SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------LLR  231 (278)
Q Consensus       160 --~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  231 (278)
                        ...|+.+|++.+.+++.++.++   +++++.++||.+.++...............-+............      ...
T Consensus       143 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  219 (345)
T 2bll_A          143 KPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  219 (345)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE
T ss_pred             CcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEE
Confidence              1279999999999999998876   79999999999876642100000000000000111111111110      011


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ..++.++|+|++++.++.......+|+.+++.+|.
T Consensus       220 ~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          220 RCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            34789999999999999765444678999999884

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=1.5e-23  Score=183.61  Aligned_cols=219  Identities=16%  Similarity=0.128  Sum_probs=149.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH---HHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---AALAS----TIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~---~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++|++|||||+|+||++++++|+++|++|+++.|+.+..   ..+.+    ..++.++.+|++|.++++++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            3678999999999999999999999999999988875422   22211    1135678999999998888775      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC---------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL---------  158 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------  158 (278)
                       ++|+|||+|+.. .   ....  +..++.+++|+.++.++++++.+..    ..+++|++||..+..+.+         
T Consensus        77 -~~d~Vih~A~~~-~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 -GCTGVFHVATPM-D---FESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             -TCSEEEECCCCC-C---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             -CCCEEEEecccc-C---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcccCCCCCcccCcc
Confidence             689999999854 1   1111  2335789999999999999988752    146999999988543211         


Q ss_pred             -------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH----HHHhhhc-cCCCCHHHHH
Q 023708          159 -------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN----AYRKYLG-KADMKPEEVC  220 (278)
Q Consensus       159 -------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~----~~~~~~~-~~~~~~~~~~  220 (278)
                                   ....|+.||.+.+.+++.++.++   |++++.++||.+.++....    ....... ..+ .+..  
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g-~~~~--  219 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMPPSLITALSPITG-NEAH--  219 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHT-CGGG--
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC-CCcc--
Confidence                         22369999999999998877654   8999999999988775321    0000000 000 0000  


Q ss_pred             HHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeec
Q 023708          221 KMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVID  263 (278)
Q Consensus       221 ~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~d  263 (278)
                        ....   +..++++++|+|+++++++...  ...|..+..+
T Consensus       220 --~~~~---~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~  255 (337)
T 2c29_D          220 --YSII---RQGQFVHLDDLCNAHIYLFENP--KAEGRYICSS  255 (337)
T ss_dssp             --HHHH---TEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECC
T ss_pred             --cccc---CCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeC
Confidence              0000   1245889999999999998643  3456554333

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=8.3e-22  Score=176.47  Aligned_cols=234  Identities=14%  Similarity=0.028  Sum_probs=159.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH--------------------HHHHh--hhCCeEEEecCCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG--------------------AALAS--TIGGRYIHCDVTK   72 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~--------------------~~~~~--~~~~~~~~~D~~~   72 (278)
                      .++.++|||||+|+||++++++|+++|++|++++|.....                    .....  ..++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            4678899999999999999999999999999998754321                    11111  1247789999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           73 EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        73 ~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .+++.++++..     ++|+||||||....  .....+.+++...+++|+.++.++++++.+.    +..+++|++||..
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~  157 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence            99999988754     69999999996522  1122356778889999999999999988764    2124999999987


Q ss_pred             hhc------------------------CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHh-
Q 023708          153 AIM------------------------GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRK-  207 (278)
Q Consensus       153 ~~~------------------------~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-  207 (278)
                      .+.                        +......|+.||++.+.+++.++.++   |++++.++||.+.++........ 
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            653                        22335689999999999999998887   89999999999877643100000 


Q ss_pred             -h---hc-c---CCCCHHHHHHHHhhcCC-C-----CCCCCCCHHHHHHHHHHhccCCCCCcee--eEEeecC
Q 023708          208 -Y---LG-K---ADMKPEEVCKMVRDSGS-L-----LRGRSASIEDVAQAALFLASEEAGFITA--HNLVIDG  264 (278)
Q Consensus       208 -~---~~-~---~~~~~~~~~~~~~~~~~-~-----~~~~~~~~edva~~~~~l~s~~~~~~tG--~~i~~dg  264 (278)
                       .   .. .   ...-+.-.......... +     ....++.++|+|++++.++....  ..|  +.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence             0   00 0   00001111111111110 0     11346789999999999986442  234  6777754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=3.6e-23  Score=179.32  Aligned_cols=216  Identities=17%  Similarity=0.149  Sum_probs=154.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |++|||||+|+||++++++|+++|+.|++..+.......+  ...+.++.+|+++ +++.++++       ++|+|||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a   71 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV--NEAARLVKADLAA-DDIKDYLK-------GAEEVWHIA   71 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS--CTTEEEECCCTTT-SCCHHHHT-------TCSEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc--CCCcEEEECcCCh-HHHHHHhc-------CCCEEEECC
Confidence            5799999999999999999999995555544443221111  1246788999999 87887765       799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------CCCCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------GGLASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~Y~~s  166 (278)
                      +...     .+.+.+++++.+++|+.++.++++++...    + .+++|++||...+.           +..+...|+.+
T Consensus        72 ~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s  141 (313)
T 3ehe_A           72 ANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRKA----G-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGAS  141 (313)
T ss_dssp             CCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             CCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHH
Confidence            8532     23344678899999999999999886543    2 57999999988763           33345689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-------CCCCCCCCHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-------LLRGRSASIED  239 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ed  239 (278)
                      |++.+.+++.++.++   +++++.++|+.+.++......         -+............       .....++.++|
T Consensus       142 K~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  209 (313)
T 3ehe_A          142 KLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGV---------IYDFIMKLKRNPEELEILGNGEQNKSYIYISD  209 (313)
T ss_dssp             HHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSH---------HHHHHHHHHHCTTEEEESTTSCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcCh---------HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHH
Confidence            999999999999886   899999999999776422100         00111111111000       01245789999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+++++++.+   ...|+.+++.+|...
T Consensus       210 va~a~~~~~~~---~~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          210 CVDAMLFGLRG---DERVNIFNIGSEDQI  235 (313)
T ss_dssp             HHHHHHHHTTC---CSSEEEEECCCSCCE
T ss_pred             HHHHHHHHhcc---CCCCceEEECCCCCe
Confidence            99999999973   356889999988653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=1.9e-23  Score=182.82  Aligned_cols=217  Identities=16%  Similarity=0.142  Sum_probs=158.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc---C---CeEEEEecchH-----HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAEN---G---AHIVIADILDE-----LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~---g---~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++|||||+|+||++++++|+++   |   ++|++++|...     ....+....++.++.+|++|.+++++++       
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------
Confidence            5999999999999999999997   8   99999988531     1111111124678899999999888776       


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------C
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------G  156 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~  156 (278)
                      +++|+|||+||....     +.+.+++++.+++|+.++.++++++.+..     .+++|++||...+.           +
T Consensus        75 ~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-----~~~~v~~SS~~vyg~~~~~~~~E~~~  144 (337)
T 1r6d_A           75 RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG-----VGRVVHVSTNQVYGSIDSGSWTESSP  144 (337)
T ss_dssp             TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT-----CCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEecchHHhCCCCCCCCCCCCC
Confidence            379999999986421     12335677899999999999999888752     46999999987653           2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHhhcC-C-----
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSG-S-----  228 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-----  228 (278)
                      ......|+.+|++.+.+++.++.++   +++++.++||.+.++....  ..          +........... .     
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  211 (337)
T 1r6d_A          145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLI----------PLFVTNLLDGGTLPLYGDG  211 (337)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHH----------HHHHHHHHTTCCEEEETTS
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChH----------HHHHHHHhcCCCcEEeCCC
Confidence            2345689999999999999998886   7999999999887765311  11          011111111110 0     


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .....++.++|+|+++++++...   .+|+.+++.+|...
T Consensus       212 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          212 ANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            01235678999999999998654   36899999998753

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=4.4e-23  Score=174.95  Aligned_cols=193  Identities=19%  Similarity=0.154  Sum_probs=146.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .|++|||||+|+||++++++|+++|++|++++|+.+...    ..++.++.+|++|.+++.++++       ++|+||||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVK-------DCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHT-------TCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHc-------CCCEEEEC
Confidence            368999999999999999999999999999998754210    1245678899999998888875       69999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC------------CCchhh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL------------ASHAYS  164 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~Y~  164 (278)
                      ||...         .+++++.+++|+.++.++++++.+.    + .+++|++||...+...+            ....|+
T Consensus        71 a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~  136 (267)
T 3ay3_A           71 GGVSV---------ERPWNDILQANIIGAYNLYEAARNL----G-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYG  136 (267)
T ss_dssp             CSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT----T-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHH
T ss_pred             CcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHH
Confidence            99641         1346789999999999999988652    2 57999999988764332            246899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCC-CChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGV-PSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      .+|++++.+++.++.+   .+++++.++||.+ .++..              ...    .        ..+.+++|+|++
T Consensus       137 ~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~--------------~~~----~--------~~~~~~~dva~~  187 (267)
T 3ay3_A          137 LSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD--------------ARM----M--------ATWLSVDDFMRL  187 (267)
T ss_dssp             HHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS--------------HHH----H--------HHBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC--------------CCe----e--------eccccHHHHHHH
Confidence            9999999999988653   4899999999998 33321              100    0        225799999999


Q ss_pred             HHHhccCCCCCceeeEEeecCC
Q 023708          244 ALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      ++.++..+.  ..+..+.+.++
T Consensus       188 ~~~~~~~~~--~~~~~~~~~~~  207 (267)
T 3ay3_A          188 MKRAFVAPK--LGCTVVYGASA  207 (267)
T ss_dssp             HHHHHHSSC--CCEEEEEECCS
T ss_pred             HHHHHhCCC--CCceeEecCCC
Confidence            999986542  22344444443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=4e-23  Score=179.08  Aligned_cols=216  Identities=14%  Similarity=0.083  Sum_probs=127.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.     .  +  ++.+|++|.+++.++++..     ++|+||||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~vih~   67 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P--K--FEQVNLLDSNAVHHIIHDF-----QPHVIVHC   67 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHH-----CCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C--C--eEEecCCCHHHHHHHHHhh-----CCCEEEEC
Confidence            5789999999999999999999999999999986543     1  1  6789999999998888754     69999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------CCCCchhhhh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------GLASHAYSLS  166 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------~~~~~~Y~~s  166 (278)
                      ||....     ..+.+++++.+++|+.++.++++++.+.      .+++|++||...+.+          ..+...|+.+
T Consensus        68 A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~s  136 (315)
T 2ydy_A           68 AAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKT  136 (315)
T ss_dssp             C------------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHH
T ss_pred             CcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHH
Confidence            996532     2245778899999999999999998863      249999999987644          3345689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh---hhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSE---MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |++.+.+++.++.++  ..+|.+.|. |+..++   +........... +...       . ....+..++++++|+|++
T Consensus       137 K~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~-~~~~-------~-~~~~~~~~~i~v~Dva~a  204 (315)
T 2ydy_A          137 KLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFS-NKSA-------N-MDHWQQRFPTHVKDVATV  204 (315)
T ss_dssp             HHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCC-SSCE-------E-EECSSBBCCEEHHHHHHH
T ss_pred             HHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhc-CCCe-------e-eccCceECcEEHHHHHHH
Confidence            999999999875332  234555544 444431   111111110000 0000       0 001133578899999999


Q ss_pred             HHHhccCC-CCCceeeEEeecCCcccC
Q 023708          244 ALFLASEE-AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~~-~~~~tG~~i~~dgG~~~~  269 (278)
                      +++++... .....|+.+++.+|..+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          205 CRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             HHHHHHhhccccCCCCeEEEcCCCccc
Confidence            99998643 223568899999987543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.89  E-value=7.4e-23  Score=185.00  Aligned_cols=224  Identities=13%  Similarity=0.064  Sum_probs=153.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH---HHHHHh--------------hhCCeEEEecCCCHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL---GAALAS--------------TIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~---~~~~~~--------------~~~~~~~~~D~~~~~~i   76 (278)
                      ...++++|||||+|+||++++++|++.|++|++++|+.+.   ...+.+              ..++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            3457899999999999999999999999999999997652   222111              13578899999998877


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh--h
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--I  154 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~--~  154 (278)
                      .        ..+++|+||||||....        .++++..+++|+.++.++++++.+   .   .+++|++||..+  .
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~--------~~~~~~~~~~Nv~g~~~l~~aa~~---~---~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ---H---HARLIYVSTISVGTY  203 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---T---TCEEEEEEEGGGGSE
T ss_pred             C--------CcCCCCEEEECCcccCC--------CCCHHHHHHHHHHHHHHHHHHHHh---c---CCcEEEECchHhCCC
Confidence            7        45689999999997522        256788999999999999999877   2   469999999887  0


Q ss_pred             ----------------cCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHH
Q 023708          155 ----------------MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEE  218 (278)
Q Consensus       155 ----------------~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  218 (278)
                                      .+......|+.+|++.+.+++.++.    .|++++.++||.+.++.....+..... ...-+..
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~-~~~~~~~  278 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIK-TNRFSMV  278 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGG-GCHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcc-hHHHHHH
Confidence                            0122566899999999999998753    589999999999876643211000000 0000001


Q ss_pred             HHHHHhhcCCC------CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          219 VCKMVRDSGSL------LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       219 ~~~~~~~~~~~------~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ...... ...+      ....+.+++|+|++++.++....   .|+.+++++|..+
T Consensus       279 ~~~~~~-~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          279 MNDLLQ-LDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHHHHH-SSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HHHHHh-cCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            111111 0000      12457889999999999997654   7899999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=8.4e-23  Score=179.07  Aligned_cols=224  Identities=18%  Similarity=0.122  Sum_probs=155.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcC-------CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENG-------AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..++++++|||||+|+||++++++|+++|       ++|++++|..+.... ....++.++.+|++|.++++++++    
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVE----   84 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHh----
Confidence            35788999999999999999999999999       899999987532111 011235678999999999888875    


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-C------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-L------  158 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~------  158 (278)
                        +++|+||||||...      ..+.+++++.+++|+.++.++++++.+...+.+..+++|++||...+.+. +      
T Consensus        85 --~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  156 (342)
T 2hrz_A           85 --ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE  156 (342)
T ss_dssp             --TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred             --cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence              37999999999642      12346788999999999999999988764332124699999999776442 1      


Q ss_pred             ----CCchhhhhHHHHHHHHHHHHHHHC--CCCcEEEEec--CCCCCChh---hHHHHHhhhccCCCCHHHHHHHHhhcC
Q 023708          159 ----ASHAYSLSKEAIIGLARSTACELG--KHGIRVNCIS--PHGVPSEM---LVNAYRKYLGKADMKPEEVCKMVRDSG  227 (278)
Q Consensus       159 ----~~~~Y~~sK~a~~~l~~~l~~e~~--~~~i~v~~v~--pG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                          +...|+.+|++.+.+++.++.++.  ...+|++.+.  ||...++.   ......              .......
T Consensus       157 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~--------------~~~~~~~  222 (342)
T 2hrz_A          157 FHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILR--------------EPLVGQE  222 (342)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHH--------------HHHTTCC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHH--------------HHhcCCC
Confidence                456899999999999999887641  1235666666  88765432   111111              1111110


Q ss_pred             -CCCCC-----CCCCHHHHHHHHHHhccCCCC-CceeeEEeec
Q 023708          228 -SLLRG-----RSASIEDVAQAALFLASEEAG-FITAHNLVID  263 (278)
Q Consensus       228 -~~~~~-----~~~~~edva~~~~~l~s~~~~-~~tG~~i~~d  263 (278)
                       .++.+     .+.+++|+|++++.++..... ...+..+++.
T Consensus       223 ~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          223 AVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             EEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             eeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence             01111     256899999999998864321 1135678874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=2.2e-23  Score=183.99  Aligned_cols=222  Identities=16%  Similarity=0.161  Sum_probs=155.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++++++|||||+|+||++++++|+++| ++|++++|...... .....++. +.+|+++.+.++++++.  ..++++|
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~--~~~~~~d  117 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLN-IADYMDKEDFLIQIMAG--EEFGDVE  117 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSC-CSEEEEHHHHHHHHHTT--CCCSSCC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCce-EeeecCcHHHHHHHHhh--cccCCCC
Confidence            34678899999999999999999999999 99999988653311 11111233 67899998888887753  2356899


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------CC
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------AS  160 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~  160 (278)
                      +|||+||....       +.+++++.+++|+.++.++++++.+.    + . ++|++||...+...+           ..
T Consensus       118 ~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~  184 (357)
T 2x6t_A          118 AIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYEKPL  184 (357)
T ss_dssp             EEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCS
T ss_pred             EEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEcchHHhCCCCCCCcCCcCCCCCC
Confidence            99999997532       12456789999999999999998873    2 4 899999988764332           25


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH------HHHHhhhccCCCCHHHHHHHHhhcCC------
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV------NAYRKYLGKADMKPEEVCKMVRDSGS------  228 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------  228 (278)
                      ..|+.+|++.+.+++.++.++   |++++.++||.+.++...      ..+.          ............      
T Consensus       185 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  251 (357)
T 2x6t_A          185 NVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAF----------HLNTQLNNGESPKLFEGS  251 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHH----------HHHHHHHTTCCCEEETTG
T ss_pred             ChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHH----------HHHHHHHcCCCcEEeCCC
Confidence            589999999999999988764   799999999988766421      1110          001111111000      


Q ss_pred             CC-CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 LL-RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ~~-~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .. ...++.++|+|+++++++....    |+.+++.+|...
T Consensus       252 ~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          252 ENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             GGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             CcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            01 2357899999999999997553    789999888653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=5e-22  Score=174.43  Aligned_cols=235  Identities=14%  Similarity=0.086  Sum_probs=158.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----------HHHHHHHh--hhCCeEEEecCCCHHHHHHHHHHHH
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD----------ELGAALAS--TIGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----------~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +|++|||||+|+||++++++|+++|++|++++|..          +..+.+.+  ..++.++.+|++|.+++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            57899999999999999999999999999988742          23333332  124678999999999998888752 


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--------
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--------  156 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------  156 (278)
                          ++|+||||||.....     ...+++++.+++|+.++.++++++..    .+ .+++|++||...+..        
T Consensus        81 ----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~~~~E  146 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG-----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYLPLDE  146 (348)
T ss_dssp             ----CEEEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCCCcCcc-----chhhchHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCCCCCcCC
Confidence                799999999964221     13456788999999999999886543    22 579999999877532        


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCH-HHHHHHHh-hcCC--
Q 023708          157 ----GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKP-EEVCKMVR-DSGS--  228 (278)
Q Consensus       157 ----~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~--  228 (278)
                          .+....|+.+|++++.+++.++.+  ..++++..++|+.+..+.....+........... ..+..... ....  
T Consensus       147 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (348)
T 1ek6_A          147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (348)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeE
Confidence                122568999999999999999887  3469999999877654421000000000000000 00111111 0000  


Q ss_pred             -----------CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 -----------LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 -----------~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                                 .....++.++|+|++++.++........++.+++.+|...
T Consensus       225 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence                       0113568899999999999864322223488999877643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=7.1e-23  Score=177.89  Aligned_cols=215  Identities=16%  Similarity=0.157  Sum_probs=144.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHH---HHHHHh----hhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDEL---GAALAS----TIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~---~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +|++|||||+|+||++++++|+++|++|+++.| +.+.   ...+.+    ..++.++.+|++|.++++++++       
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence            588999999999999999999999999999888 5422   111111    0124577899999998888775       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC--------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMED-VKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA--------  159 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------  159 (278)
                      ++|+|||+|+..       +...++ +++.+++|+.+++++++++.+..   + .+++|++||..+..+.+.        
T Consensus        74 ~~d~vih~A~~~-------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~~~~~e~  142 (322)
T 2p4h_X           74 GCVGIFHTASPI-------DFAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDKDVLDES  142 (322)
T ss_dssp             TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCCSEECTT
T ss_pred             CCCEEEEcCCcc-------cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCCeecCCc
Confidence            589999999632       111122 45689999999999999887541   2 579999999886532211        


Q ss_pred             --------------CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHH--HHHHHH
Q 023708          160 --------------SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPE--EVCKMV  223 (278)
Q Consensus       160 --------------~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~  223 (278)
                                    ...|+.||++.+.+++.++.+   .|++++.++||.+.++.....         ....  ......
T Consensus       143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~---------~~~~~~~~~~~~  210 (322)
T 2p4h_X          143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPK---------LPDSIEKALVLV  210 (322)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSS---------CCHHHHHHTHHH
T ss_pred             cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCC---------CCchHHHHHHHH
Confidence                          116999999988888776654   489999999999988753210         0100  000011


Q ss_pred             hhc-CCCCCC--CCCCHHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          224 RDS-GSLLRG--RSASIEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       224 ~~~-~~~~~~--~~~~~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ... ...+.+  .+++++|+|++++++++..  ..+|+ +++.+
T Consensus       211 ~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~~  251 (322)
T 2p4h_X          211 LGKKEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCSP  251 (322)
T ss_dssp             HSCGGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECCC
T ss_pred             hCCCccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEcC
Confidence            110 001111  4789999999999999653  25676 44443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=2.3e-23  Score=172.35  Aligned_cols=205  Identities=13%  Similarity=-0.009  Sum_probs=152.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||+|+||++++++|+++|++|++++|+.+....+.  .++.++.+|++|.+++.++++       ++|+|||||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a   75 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-------GADAVISAF   75 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-------TCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-------CCCEEEEeC
Confidence            68999999999999999999999999999999876543221  346788999999999988876       699999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------CCchhhhhH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------ASHAYSLSK  167 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~~sK  167 (278)
                      |....           ..+.+++|+.++.++++++.+.    + .+++|++||..+..+.+          ....|+.+|
T Consensus        76 ~~~~~-----------~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK  139 (227)
T 3dhn_A           76 NPGWN-----------NPDIYDETIKVYLTIIDGVKKA----G-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVK  139 (227)
T ss_dssp             CC-----------------CCSHHHHHHHHHHHHHHHT----T-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHH
T ss_pred             cCCCC-----------ChhHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHH
Confidence            85411           1137889999999888877543    2 56999999988765433          356899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC---CCCCCCCHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL---LRGRSASIEDVAQAA  244 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~edva~~~  244 (278)
                      ++.+.+.+.++.+   .+++++.++||.+.++.....   ....            ......   ....++.++|+|+++
T Consensus       140 ~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~---~~~~------------~~~~~~~~~~~~~~i~~~Dva~ai  201 (227)
T 3dhn_A          140 ALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTG---RYRL------------GKDDMIVDIVGNSHISVEDYAAAM  201 (227)
T ss_dssp             HHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCC---CCEE------------ESSBCCCCTTSCCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHhhc---cCccEEEEeCCcccCCCcccc---ceee------------cCCCcccCCCCCcEEeHHHHHHHH
Confidence            9999999888763   489999999999876642110   0000            000000   013467899999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +.++..+  ...|+.+.+.+...
T Consensus       202 ~~~l~~~--~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          202 IDELEHP--KHHQERFTIGYLEH  222 (227)
T ss_dssp             HHHHHSC--CCCSEEEEEECCSC
T ss_pred             HHHHhCc--cccCcEEEEEeehh
Confidence            9999655  36789999887654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=5.5e-22  Score=177.30  Aligned_cols=166  Identities=20%  Similarity=0.217  Sum_probs=130.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHH-HcCCeEEEEecchHH---------HHHHH---hh-------hC---CeEEEecCCCH
Q 023708           17 GKVAVITGGARGIGAATAKLFA-ENGAHIVIADILDEL---------GAALA---ST-------IG---GRYIHCDVTKE   73 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~-~~g~~Vi~~~r~~~~---------~~~~~---~~-------~~---~~~~~~D~~~~   73 (278)
                      ++++|||||+|+||++++++|+ ++|++|++++|....         ...+.   +.       .+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999886432         22221   11       13   67899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           74 EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        74 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +++.+++++    ++++|+||||||.....     .+.+++++.+++|+.++.++++++...    + .+++|++||...
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLLH----K-CDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC-----cchhhHHHHHHHHhHHHHHHHHHHHHh----C-CCEEEEECCHHH
Confidence            998887763    45699999999965221     134677899999999999999976432    2 579999999766


Q ss_pred             hcCCC------------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          154 IMGGL------------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       154 ~~~~~------------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      +....                  ....|+.+|++.+.+++.++.++   +++++.++|+.+.++
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~  208 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA  208 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCC
Confidence            53222                  25689999999999999999887   799999999888655

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=2.5e-21  Score=171.51  Aligned_cols=222  Identities=15%  Similarity=0.102  Sum_probs=150.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHHh-----hhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALAS-----TIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.     ...+.+     ..++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            3789999999999999999999999999999987543     112211     124567889999999999988765   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---------  157 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------  157 (278)
                        ++|+||||||.....     .+.++++..+++|+.++.++++++.+...+ + .+++|++||...+...         
T Consensus        78 --~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCccC
Confidence              699999999975322     233567889999999999999999876432 1 3799999998765432         


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh-----HHHHHhhhccCCCCHHHHHHHHhhcCC--
Q 023708          158 --LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML-----VNAYRKYLGKADMKPEEVCKMVRDSGS--  228 (278)
Q Consensus       158 --~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (278)
                        .....|+.+|++.+.+++.++.++   ++.+..+.|..+..+..     ...+.          ............  
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~----------~~~~~~~~g~~~~~  215 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKIT----------RAIANIAQGLESCL  215 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHH----------HHHHHHHTTSCCCE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHH----------HHHHHHHcCCCCce
Confidence              235689999999999999999886   45555555443322210     01110          001111111000  


Q ss_pred             -----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          229 -----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       229 -----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                           .....+++++|+|++++.++....    ++.+++.+|..
T Consensus       216 ~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          216 YLGNMDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             eecCCCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence                 011357899999999999986542    35677776654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=1.5e-21  Score=170.55  Aligned_cols=226  Identities=17%  Similarity=0.067  Sum_probs=154.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      -.++++|||||+|+||++++++|+++|++|++++|..+.     ...+....++.++.+|++|.+++.++++..     +
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            356889999999999999999999999999999986532     221111224678899999999999988764     6


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------  158 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------  158 (278)
                      +|+|||+||....     ..+.++++..+++|+.++.++++++.+.    +..+++|++||...+....           
T Consensus        87 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           87 PQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             CSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999999996421     1112456789999999999999988764    2126999999987654322           


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHH-HHhhhccCCCCHHHHHHHHhhcCC-C------C
Q 023708          159 ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNA-YRKYLGKADMKPEEVCKMVRDSGS-L------L  230 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~------~  230 (278)
                      ....|+.+|++.+.+++.++.++   ++++..+.|+.+..+..... ....      -+............ .      .
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~------~~~~~~~~~~g~~~~~~~g~g~~  228 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRK------VTDAVARIKLGKQQELRLGNVDA  228 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHH------HHHHHHHHHTTSCSCEEESCTTC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHH------HHHHHHHHHcCCCceEEeCCCcc
Confidence            24579999999999999998876   67788888876654421100 0000      00001111111100 0      1


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       231 ~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ...++.++|+|++++.++....    ++.+++.+|..
T Consensus       229 ~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          229 KRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             EEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             eeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence            1246789999999999986543    35777877654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.88  E-value=2.5e-22  Score=191.00  Aligned_cols=231  Identities=14%  Similarity=0.101  Sum_probs=161.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHH-HHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEED-VESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~g~id~   92 (278)
                      ++++++|||||+|+||++++++|+++ |++|++++|+.+....+....++.++.+|++|.++ ++++++       ++|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-------~~D~  385 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDV  385 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH-------HCSE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc-------CCCE
Confidence            46789999999999999999999998 89999999976543333222356788999998765 555554       5899


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC--------------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL--------------  158 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--------------  158 (278)
                      ||||||.....     ...+++++.+++|+.++.++++++.+.      .+++|++||...+....              
T Consensus       386 Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~~------~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T 1z7e_A          386 VLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  454 (660)
T ss_dssp             EEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCSSSBCTTTCCEEEC
T ss_pred             EEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHHh------CCEEEEEecHHHcCCCCCcccCCCccccccC
Confidence            99999965321     113567789999999999988887652      26999999987753221              


Q ss_pred             ----CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------
Q 023708          159 ----ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------  228 (278)
Q Consensus       159 ----~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  228 (278)
                          ....|+.||.+.+.+++.++.++   |++++.++||.+.++................+.-..........      
T Consensus       455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g  531 (660)
T 1z7e_A          455 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  531 (660)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGG
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCC
Confidence                12369999999999999998876   79999999999987653210000000000001111111111110      


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      .....+++++|+|+++++++.......+|+.+++++|.
T Consensus       532 ~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            01134778999999999999766555678999999885

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=9.2e-23  Score=215.29  Aligned_cols=172  Identities=17%  Similarity=0.137  Sum_probs=131.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHH---HHHHHhh---h--CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDEL---GAALAST---I--GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~---~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+|++|||||++|||+++|++|+++|++ |++++|+...   ..+..++   .  ++.++.||++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            6899999999999999999999999997 7788886422   1222221   1  256778999999999999999874 


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|+||+||||||+.. ..++.+++.++|++.+++|+.|++++.+.+.+.|.+   .++||++||.++..+.++...|+++
T Consensus      1962 ~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCCcHHHHHH
Confidence            799999999999863 467889999999999999999999999999998854   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCC
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGV  196 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v  196 (278)
                      |+++++|++.++.+    |.+..++..|.+
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            99999999976654    566666666554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=3.6e-22  Score=174.08  Aligned_cols=231  Identities=15%  Similarity=0.129  Sum_probs=157.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|||||+|+||++++++|+++|++|++++|......+... .++.++.+|++|.+++.+++++     +++|+|||+|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a   75 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFA   75 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-TTSEEEECCTTCHHHHHHHHHH-----SCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC-CCcEEEECCCCCHHHHHHHHhh-----cCCCEEEECC
Confidence            579999999999999999999999999999886432111111 1567899999999999888865     3799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~s  166 (278)
                      |....     ..+.+++++.+++|+.++.++++++...    + .+++|++||...+...           .....|+.+
T Consensus        76 ~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~s  145 (330)
T 2c20_A           76 ADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMDEF----K-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGET  145 (330)
T ss_dssp             CCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHH
T ss_pred             cccCc-----cccccCHHHHHHHHhHHHHHHHHHHHHc----C-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHH
Confidence            96422     1134677889999999999999876532    2 5799999998765421           235689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCH-HHHHH-HHhhcCCC-------------CC
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKP-EEVCK-MVRDSGSL-------------LR  231 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-------------~~  231 (278)
                      |++.+.+++.++.++   +++++.++||.+.++.....+... ....... ..... .......+             ..
T Consensus       146 K~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          146 KLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGED-HRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCC-CSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccc-cccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            999999999998765   899999999877655311000000 0000000 00111 11010000             11


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..++.++|+|++++.++........++.+++.+|..+
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence            2467899999999998864322234678888877644

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=8.8e-22  Score=168.83  Aligned_cols=196  Identities=14%  Similarity=0.096  Sum_probs=146.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ..+++|||||+|+||++++++|+++|++|++++|.                .+|++|.+++.++++..     ++|+|||
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~-----~~d~vih   69 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEK-----KPNVVIN   69 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            46889999999999999999999999999999986                27999999999888754     7999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------CCchhh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------ASHAYS  164 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~  164 (278)
                      |||....     +...+++++.+++|+.++.++++++.+.    + . ++|++||...+.+..           ....|+
T Consensus        70 ~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~  138 (292)
T 1vl0_A           70 CAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYG  138 (292)
T ss_dssp             CCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred             CCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHH
Confidence            9996421     2234678899999999999999998763    2 3 999999987654322           345899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh---hhHHHHHhhhccCCCCHHHHHHHHhhcC----CCCCCCCCCH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE---MLVNAYRKYLGKADMKPEEVCKMVRDSG----SLLRGRSASI  237 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  237 (278)
                      .+|++.+.+++.++.       .+..++|+.+.++   .......              .......    ......++.+
T Consensus       139 ~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~v  197 (292)
T 1vl0_A          139 KTKLEGENFVKALNP-------KYYIVRTAWLYGDGNNFVKTMIN--------------LGKTHDELKVVHDQVGTPTST  197 (292)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEESSSSCHHHHHHH--------------HHHHCSEEEEESSCEECCEEH
T ss_pred             HHHHHHHHHHHhhCC-------CeEEEeeeeeeCCCcChHHHHHH--------------HHhcCCcEEeecCeeeCCccH
Confidence            999999999988643       3666777766543   2111111              1111000    0022567889


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+|++++++++..    +|+.+++.+|...
T Consensus       198 ~Dva~~~~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          198 VDLARVVLKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHHHHHHHHHHHT----CCEEEECCCBSCE
T ss_pred             HHHHHHHHHHHhcC----CCcEEEecCCCCc
Confidence            99999999999754    6889999988653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=2.4e-21  Score=171.96  Aligned_cols=221  Identities=13%  Similarity=0.032  Sum_probs=154.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHHHH------hhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAALA------STIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~~~------~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      |++|||||+|+||++++++|+++|++|++++|..+.     ...+.      ...++.++.+|++|.+++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999886432     11110      1124678899999999999988765   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------  156 (278)
                        ++|+||||||....     ..+.+++++.+++|+.++.++++++.+...+ + .+++|++||...+..          
T Consensus       102 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-cceEEEecchhhhCCCCCCCCCccC
Confidence              69999999996421     1234678899999999999999998876431 1 379999999887642          


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh-----HHHHHhhhccCCCCHHHHHHHHhhcCC--
Q 023708          157 -GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML-----VNAYRKYLGKADMKPEEVCKMVRDSGS--  228 (278)
Q Consensus       157 -~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (278)
                       ......|+.+|++.+.+++.++.++   ++.+..+.|+.+..+..     ...+.          ..+.........  
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~----------~~~~~~~~g~~~~~  239 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKIS----------RSVAKIYLGQLECF  239 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH----------HHHHHHHHTSCSCE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHH----------HHHHHHHcCCCcee
Confidence             2235689999999999999999886   67777777655443311     01000          001111111100  


Q ss_pred             -----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          229 -----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       229 -----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                           .....++.++|+|++++.++....    +..+++.+|..
T Consensus       240 ~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          240 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             EeCCCCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence                 011347889999999999986543    25677766653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=1.9e-21  Score=168.39  Aligned_cols=210  Identities=16%  Similarity=0.107  Sum_probs=154.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++++|||||+|+||++++++|+++|++|++++|...... +.   ++.++.+|++ .+++.++++       ++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLN-------DVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTT-------TCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhc-------CCCEEEEc
Confidence            378999999999999999999999999999999844333 22   6789999999 888888775       79999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSL  165 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~  165 (278)
                      |+.....         ++.+.+++|+.++.++++++...    + .+++|++||...+..           ......|+.
T Consensus        70 a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~----~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~  135 (311)
T 3m2p_A           70 AATRGSQ---------GKISEFHDNEILTQNLYDACYEN----N-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGV  135 (311)
T ss_dssp             CCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHH
T ss_pred             cccCCCC---------ChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHH
Confidence            9975332         34567889999999988887543    2 568999999776532           123458999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHhhcC------CCCCCCCCCH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSG------SLLRGRSASI  237 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  237 (278)
                      +|.+.+.+++.++.+   .+++++.++|+.+.++....  ..          +.-.........      ......++.+
T Consensus       136 sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~v~v  202 (311)
T 3m2p_A          136 SKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMI----------NRFFRQAFHGEQLTLHANSVAKREFLYA  202 (311)
T ss_dssp             HHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHH----------HHHHHHHHTCCCEEESSBCCCCEEEEEH
T ss_pred             HHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHH----------HHHHHHHHcCCCeEEecCCCeEEceEEH
Confidence            999999999998876   38999999999887664321  11          011111111110      0012356789


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +|+|++++.++....   .|+.+++.+|...
T Consensus       203 ~Dva~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          203 KDAAKSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHHHHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHHHHHHHHhcCC---CCCeEEeCCCCcc
Confidence            999999999997653   7889999888654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=9.7e-22  Score=171.56  Aligned_cols=184  Identities=14%  Similarity=-0.001  Sum_probs=139.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHH-HcCCeEEEEecchHH---------------HHHHHhhhC--CeEEEecCCCHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFA-ENGAHIVIADILDEL---------------GAALASTIG--GRYIHCDVTKEED   75 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~-~~g~~Vi~~~r~~~~---------------~~~~~~~~~--~~~~~~D~~~~~~   75 (278)
                      .+.+|++||||||+|||++++..|+ +.|+.|+++.+..+.               ..+..+..+  ...+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 789999988764321               112222223  5678999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCC------------CC---------------------cccCCHHHHHHHHH---
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSG------------GS---------------------ITSLNMEDVKFLLS---  119 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~------------~~---------------------~~~~~~~~~~~~~~---  119 (278)
                      ++++++++.+.+|+||+||||++.....            +|                     +...+.++++....   
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            9999999999999999999999964210            11                     12234555555444   


Q ss_pred             HHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC--CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCC
Q 023708          120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL--ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVP  197 (278)
Q Consensus       120 ~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~  197 (278)
                      ....+.+...+...+.|.+   .+++|.+|++.+....|  ....+|++|++|+..++.|+.+++  +++++++.||.+.
T Consensus       207 ~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~v  281 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLV  281 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCC
T ss_pred             hhHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccc
Confidence            4555556666655566644   68999999998876554  445899999999999999999997  4899999999999


Q ss_pred             ChhhH
Q 023708          198 SEMLV  202 (278)
Q Consensus       198 t~~~~  202 (278)
                      |....
T Consensus       282 T~Ass  286 (401)
T 4ggo_A          282 TRASA  286 (401)
T ss_dssp             CTTGG
T ss_pred             cchhh
Confidence            88654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=7.6e-21  Score=156.18  Aligned_cols=202  Identities=12%  Similarity=0.057  Sum_probs=133.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|+++|++|++++|+.+....+.  .++.++.+|++|.++  +       .++++|+||||||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~-------~~~~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--S-------DLSDQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--H-------HHTTCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--h-------hhcCCCEEEECCc
Confidence            5999999999999999999999999999999987766554  467899999999887  2       2247999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC------------CCchhhhh
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL------------ASHAYSLS  166 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~Y~~s  166 (278)
                      ....              ..++|+.+    ++.+++.+.+.+ .+++|++||..+..+.+            ....|+.+
T Consensus        71 ~~~~--------------~~~~~~~~----~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~  131 (221)
T 3ew7_A           71 ISPD--------------EAEKHVTS----LDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA  131 (221)
T ss_dssp             SSTT--------------TTTSHHHH----HHHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCH
T ss_pred             CCcc--------------ccchHHHH----HHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHH
Confidence            7421              12334444    455556665543 68999999988765433            23469999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |.+.+.+. .+..  ...+++++.++||.+.++.....  .+..    .....  ....    ....+++++|+|++++.
T Consensus       132 k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~--~~~~----~~~~~--~~~~----~~~~~i~~~Dva~~~~~  196 (221)
T 3ew7_A          132 RAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG--DYQI----GKDHL--LFGS----DGNSFISMEDYAIAVLD  196 (221)
T ss_dssp             HHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC--ceEe----ccccc--eecC----CCCceEeHHHHHHHHHH
Confidence            99998873 3322  14689999999999987621110  0000    00000  0000    11347899999999999


Q ss_pred             hccCCCCCceeeEEeecCCcc
Q 023708          247 LASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++..+.  ..|+.|++-|-..
T Consensus       197 ~l~~~~--~~g~~~~~~~~~~  215 (221)
T 3ew7_A          197 EIERPN--HLNEHFTVAGKLE  215 (221)
T ss_dssp             HHHSCS--CTTSEEECCC---
T ss_pred             HHhCcc--ccCCEEEECCCCc
Confidence            997553  5688888877554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.86  E-value=4.7e-21  Score=157.96  Aligned_cols=200  Identities=12%  Similarity=-0.002  Sum_probs=140.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.++  +       .++++|+||||||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~-------~~~~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--A-------DLDSVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--H-------HHTTCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--h-------hcccCCEEEECCc
Confidence            49999999999999999999999999999999877665533 368899999999887  2       2347999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC--------------Cchhh
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA--------------SHAYS  164 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~~~Y~  164 (278)
                      ....  +  +        ..++|+.++..+    ++.+.+.+  +++|++||..+..+.+.              ...|+
T Consensus        72 ~~~~--~--~--------~~~~n~~~~~~l----~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~  133 (224)
T 3h2s_A           72 VPWG--S--G--------RGYLHLDFATHL----VSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYD  133 (224)
T ss_dssp             CCTT--S--S--------CTHHHHHHHHHH----HHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHH
T ss_pred             cCCC--c--c--------hhhHHHHHHHHH----HHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhH
Confidence            7511  1  0        124577666554    44444433  79999999887665443              56899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      .+|++.+.+ +   ......+++++.++||.+.++.....+  ........           .......+++++|+|+++
T Consensus       134 ~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~-----------~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          134 GALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSY--VAGKDTLL-----------VGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             HHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCE--EEESSBCC-----------CCTTSCCBCCHHHHHHHH
T ss_pred             HHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCc--eecccccc-----------cCCCCCceEeHHHHHHHH
Confidence            999999854 2   222356899999999999876221100  00000000           000124678999999999


Q ss_pred             HHhccCCCCCceeeEEeecCC
Q 023708          245 LFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      +.++..+.  ..|+.+++.|=
T Consensus       197 ~~~l~~~~--~~g~~~~~~~~  215 (224)
T 3h2s_A          197 LDQLEHPT--AIRDRIVVRDA  215 (224)
T ss_dssp             HHHHHSCC--CTTSEEEEEEC
T ss_pred             HHHhcCcc--ccCCEEEEecC
Confidence            99997553  55788887653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=3.7e-21  Score=168.76  Aligned_cols=222  Identities=13%  Similarity=0.072  Sum_probs=148.9

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH----HHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL----GAALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +...++++++|||||+|+||++++++|+++|++|++++|....    ...+....++.++.+|+.+..            
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------
Confidence            3456788999999999999999999999999999999885321    111111124678889998752            


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------  155 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------  155 (278)
                      +.++|+|||+||......  .   .+++++.+++|+.++.++++++.+.    +  .++|++||...+.           
T Consensus        89 ~~~~d~vih~A~~~~~~~--~---~~~~~~~~~~n~~~~~~l~~a~~~~----~--~~~v~~SS~~v~g~~~~~~~~E~~  157 (343)
T 2b69_A           89 YIEVDQIYHLASPASPPN--Y---MYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQSEDY  157 (343)
T ss_dssp             CCCCSEEEECCSCCSHHH--H---TTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             hcCCCEEEECccccCchh--h---hhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEECcHHHhCCCCCCCCcccc
Confidence            357999999999642210  0   1345678999999999999988753    2  4899999987652           


Q ss_pred             -----CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC--
Q 023708          156 -----GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS--  228 (278)
Q Consensus       156 -----~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (278)
                           +......|+.+|++.+.+++.++.++   +++++.++||.+.++.....      ....-+............  
T Consensus       158 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~  228 (343)
T 2b69_A          158 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMN------DGRVVSNFILQALQGEPLTV  228 (343)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTT------CCCHHHHHHHHHHHTCCEEE
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCC------cccHHHHHHHHHHcCCCceE
Confidence                 22234579999999999999998775   79999999998877642100      000000111111111100  


Q ss_pred             ----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 ----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          .....++.++|+|++++.++....    +..+++.+|..+
T Consensus       229 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  268 (343)
T 2b69_A          229 YGSGSQTRAFQYVSDLVNGLVALMNSNV----SSPVNLGNPEEH  268 (343)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTSSC----CSCEEESCCCEE
T ss_pred             cCCCCeEEeeEeHHHHHHHHHHHHhcCC----CCeEEecCCCCC
Confidence                012346799999999999986542    567888887643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=4.9e-22  Score=173.89  Aligned_cols=222  Identities=19%  Similarity=0.165  Sum_probs=142.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH------HHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG------AALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~------~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..      ..+....++.++.+|++|.+++.++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            68899999999999999999999999999888764321      122111246788999999988887765       68


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------------
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------------  157 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------  157 (278)
                      |+|||+|+...    ..  ..+..++.+++|+.++.++++++.+..    ..++||++||.++..+.             
T Consensus        82 D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           82 DFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             SEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            99999998541    11  112234589999999999999887642    14699999998743210             


Q ss_pred             --------C---CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHH----HHHhhhc-cCCCCHHHHHH
Q 023708          158 --------L---ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVN----AYRKYLG-KADMKPEEVCK  221 (278)
Q Consensus       158 --------~---~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~----~~~~~~~-~~~~~~~~~~~  221 (278)
                              +   ....|+.||++.+.+++.++.++   |++++.++||.+.++....    ....... ..+ .+.....
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g-~~~~~~~  227 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITG-NEFLING  227 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHT-CHHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC-Ccccccc
Confidence                    0   01159999999999998887654   7999999999988774321    1100000 000 0110100


Q ss_pred             HHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEe
Q 023708          222 MVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLV  261 (278)
Q Consensus       222 ~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~  261 (278)
                      ............+++++|+|++++++++..  ...|..+.
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~  265 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYIC  265 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEE
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEE
Confidence            000000000013789999999999998643  24565443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=9.1e-22  Score=170.13  Aligned_cols=222  Identities=16%  Similarity=0.156  Sum_probs=154.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++++|||||+|+||++++++|+++  |++|++++|+..... +.  .++.++.+|++|.+++.+++++.     ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~-----~~d~vi   73 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--NSGPFEVVNALDFNQIEHLVEVH-----KITDIY   73 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--HSSCEEECCTTCHHHHHHHHHHT-----TCCEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--CCCceEEecCCCHHHHHHHHhhc-----CCCEEE
Confidence            467999999999999999999999  899999988754321 21  24678999999999998888653     699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------CCCch
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------LASHA  162 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~~  162 (278)
                      |+||....      ...+++++.+++|+.++.++++++.+.    + .+++|++||...+.+.            .....
T Consensus        74 h~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~  142 (312)
T 2yy7_A           74 LMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKAK----K-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTV  142 (312)
T ss_dssp             ECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHTT----S-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSH
T ss_pred             ECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHHhCCCCCCCCccccCcCCCCch
Confidence            99986421      123567889999999999999887642    2 5699999998775432            22558


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCC-----CCCCCCCC
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGS-----LLRGRSAS  236 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~  236 (278)
                      |+.+|++.+.+++.++.++   +++++.++||.+.++......    .........+.... .....     .....++.
T Consensus       143 Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          143 YGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGG----GTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCS----CTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCC----chhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            9999999999999998876   799999999887653210000    00000000011111 11000     01234578


Q ss_pred             HHHHHHHHHHhccCCCCCc-eeeEEeecC
Q 023708          237 IEDVAQAALFLASEEAGFI-TAHNLVIDG  264 (278)
Q Consensus       237 ~edva~~~~~l~s~~~~~~-tG~~i~~dg  264 (278)
                      ++|+|++++.++....... .|+.+++.|
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            8999999999986543322 247788864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=2.7e-20  Score=162.85  Aligned_cols=161  Identities=18%  Similarity=0.212  Sum_probs=121.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHHHhh--hCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAALAST--IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|||||+|+||++++++|+++|++|++++|.    .+....+.+.  .++.++.+|++|.++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            69999999999999999999999999998753    2222222221  24678899999999998888641     6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------C-CCC
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------G-LAS  160 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~-~~~  160 (278)
                      ||||||.....     ...+++.+.+++|+.++.++++++...    + .+++|++||...+..           . +..
T Consensus        77 vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  146 (338)
T 1udb_A           77 VIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCccCccc-----cchhcHHHHHHHHHHHHHHHHHHHHhc----C-CCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence            99999964211     123456788999999999998865432    2 579999999876521           1 235


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCC
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGV  196 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v  196 (278)
                      ..|+.||++++.+++.++.++  .++++..++|+.+
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v  180 (338)
T 1udb_A          147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP  180 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEE
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeecee
Confidence            689999999999999998885  3788888876433

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.85  E-value=7.2e-21  Score=161.40  Aligned_cols=198  Identities=18%  Similarity=0.140  Sum_probs=140.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|++ |++|++++|+.+..      .+   +.+|++|.+++.++++..     ++|+||||||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~   66 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKK-----RPDVIINAAA   66 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhc-----CCCEEEECCc
Confidence            599999999999999999995 89999999976321      12   789999999999988764     6999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------CCchhhhhHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------ASHAYSLSKE  168 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~~sK~  168 (278)
                      ....     +.+.+++++.+++|+.++.++++++.+.      .+++|++||..++.+.+          ....|+.+|+
T Consensus        67 ~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~  135 (273)
T 2ggs_A           67 MTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKVI------DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKL  135 (273)
T ss_dssp             CCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT------TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHH
T ss_pred             ccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHHh------CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHH
Confidence            6421     2234678899999999999999988652      35999999998865433          2568999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+++.    +....+|++.|. |  ++.+............  ..       ....  ...++++++|+|+++++++
T Consensus       136 ~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~--~~-------~~~~--~~~~~~~~~dva~~i~~~~  197 (273)
T 2ggs_A          136 LGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGK--TV-------FAFK--GYYSPISARKLASAILELL  197 (273)
T ss_dssp             HHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTC--CE-------EEES--CEECCCBHHHHHHHHHHHH
T ss_pred             HHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCC--CE-------Eeec--CCCCceEHHHHHHHHHHHH
Confidence            99999987    222234444444 3  2333222211100000  00       0000  0356889999999999999


Q ss_pred             cCCCCCceeeEEeecC
Q 023708          249 SEEAGFITAHNLVIDG  264 (278)
Q Consensus       249 s~~~~~~tG~~i~~dg  264 (278)
                      +...   +| .++++|
T Consensus       198 ~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          198 ELRK---TG-IIHVAG  209 (273)
T ss_dssp             HHTC---CE-EEECCC
T ss_pred             hcCc---CC-eEEECC
Confidence            7542   55 788887

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.85  E-value=1.5e-20  Score=163.26  Aligned_cols=210  Identities=14%  Similarity=0.118  Sum_probs=151.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++++|||||+|+||++++++|+++|++|+++.|..               .+|++|.+++.+++++.     ++|+|||
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~-----~~d~vih   61 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASE-----RIDQVYL   61 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhc-----CCCEEEE
Confidence            457899999999999999999999999999988753               27999999998888754     6999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------------CC---
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------------LA---  159 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------~~---  159 (278)
                      +||....    .....+++.+.+++|+.++.++++++.+.    + .+++|++||...+...             +.   
T Consensus        62 ~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~  132 (321)
T 1e6u_A           62 AAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT  132 (321)
T ss_dssp             CCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG
T ss_pred             cCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCC
Confidence            9986421    11223566788999999999999887652    2 4699999998765321             11   


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH------HHHHhhhccCCCCHHHHHHHHh----h--cC
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV------NAYRKYLGKADMKPEEVCKMVR----D--SG  227 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~----~--~~  227 (278)
                      ...|+.+|.+.+.+++.++.++   +++++.++||.+.++...      ..+          +.-......    .  ..
T Consensus       133 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~  199 (321)
T 1e6u_A          133 NEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVI----------PALLRRFHEATAQKAPDV  199 (321)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHH----------HHHHHHHHHHHHHTCSEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccH----------HHHHHHHHHhhhcCCCce
Confidence            2489999999999999998776   799999999988766432      111          011111111    0  00


Q ss_pred             C-----CCCCCCCCHHHHHHHHHHhccCCCCC------ceeeEEeecCCcc
Q 023708          228 S-----LLRGRSASIEDVAQAALFLASEEAGF------ITAHNLVIDGGYT  267 (278)
Q Consensus       228 ~-----~~~~~~~~~edva~~~~~l~s~~~~~------~tG~~i~~dgG~~  267 (278)
                      .     .....++.++|+|++++.++......      ..|+.+++.+|..
T Consensus       200 ~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          200 VVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             EEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             EEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            0     01234679999999999998654211      2367888877654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=1.5e-22  Score=165.85  Aligned_cols=201  Identities=13%  Similarity=0.016  Sum_probs=145.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++++||||+|+||++++++|+++|+  +|++++|+.+.     ...++.++.+|++|.+++.+++         +|+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~---------~d~v   69 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS---------IDTA   69 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC---------CSEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh---------hcEE
Confidence            467899999999999999999999998  99999997653     1224567788988877665543         8999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||....       +.+++++.+++|+.++..+++++.+.    + .+++|++||...+.+  ....|+.+|++++.+
T Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~  135 (215)
T 2a35_A           70 FCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM----G-ARHYLVVSALGADAK--SSIFYNRVKGELEQA  135 (215)
T ss_dssp             EECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCCTT--CSSHHHHHHHHHHHH
T ss_pred             EECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc----C-CCEEEEECCcccCCC--CccHHHHHHHHHHHH
Confidence            999996421       13467889999999999999887653    2 568999999887643  345899999999998


Q ss_pred             HHHHHHHHCCCCcE-EEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          174 ARSTACELGKHGIR-VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       174 ~~~l~~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      ++.       .+++ ++.++||.+.++.....+...... ...+.  .   ..     ...+.+++|+|++++.++..+.
T Consensus       136 ~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~-~~~~~--~---~~-----~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          136 LQE-------QGWPQLTIARPSLLFGPREEFRLAEILAA-PIARI--L---PG-----KYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTC-CCC---------C-----HHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHH-hhhhc--c---CC-----CcCcEeHHHHHHHHHHHHhcCC
Confidence            865       3898 999999999877532111001100 00110  0   00     0235689999999999997653


Q ss_pred             CCceeeEEeecCCc
Q 023708          253 GFITAHNLVIDGGY  266 (278)
Q Consensus       253 ~~~tG~~i~~dgG~  266 (278)
                          +..+++.++.
T Consensus       198 ----~~~~~i~~~~  207 (215)
T 2a35_A          198 ----KGVRFVESDE  207 (215)
T ss_dssp             ----SEEEEEEHHH
T ss_pred             ----CCceEEcHHH
Confidence                6677777654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=6.6e-21  Score=164.50  Aligned_cols=216  Identities=18%  Similarity=0.174  Sum_probs=151.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHH--HHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           19 VAVITGGARGIGAATAKLFAENG-AHIVIADILDELG--AALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++|||||+|+||++++++|+++| ++|++++|.....  ..+.   ++. +.+|+++.+.++++++..  .++++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~-~~~d~~~~~~~~~~~~~~--~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DLN-IADYMDKEDFLIQIMAGE--EFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH---TSC-CSEEEEHHHHHHHHHTTC--CCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC---cce-eccccccHHHHHHHHhcc--ccCCCcEEEE
Confidence            38999999999999999999999 9999998865321  1221   233 678999888887776511  0236999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------CCchhh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------ASHAYS  164 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~  164 (278)
                      +||....       ..+++++.+++|+.++.++++++.+.    + . ++|++||...+...+           ....|+
T Consensus        75 ~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~  141 (310)
T 1eq2_A           75 EGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYG  141 (310)
T ss_dssp             CCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred             CcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH
Confidence            9996532       12456788999999999999988764    2 4 899999987653322           245799


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH----------HHHHhhhccCCCCHHHHHHHHhhcCCCC-CCC
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV----------NAYRKYLGKADMKPEEVCKMVRDSGSLL-RGR  233 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  233 (278)
                      .+|.+.+.+++.++.+   .|++++.++||.+.++...          .........  ....    ....  ... ...
T Consensus       142 ~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~--g~~~~~~  210 (310)
T 1eq2_A          142 YSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG--ESPK----LFEG--SENFKRD  210 (310)
T ss_dssp             HHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---------------------CBC
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcC--CCcE----EecC--CCcceEc
Confidence            9999999999998765   3899999999998766432          111110000  0000    0000  001 235


Q ss_pred             CCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       234 ~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++|+|++++.++....    |+.+++.+|...
T Consensus       211 ~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          211 FVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            6889999999999997553    789999887654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=1.3e-20  Score=161.02  Aligned_cols=201  Identities=14%  Similarity=0.041  Sum_probs=146.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      |++|||||+|+||++++++|+++  |++|++++|+.+....+.. .++.++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFA-------GVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHh-------cCCEEEE
Confidence            46999999999999999999999  9999999998765544432 357889999999998888765       6899999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHH
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLAR  175 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~  175 (278)
                      +|+.. .    .    +      ++|+.++.++++++..    .+ .+++|++||.....   ....|+.+|.+.+.+++
T Consensus        73 ~a~~~-~----~----~------~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~~~  129 (287)
T 2jl1_A           73 ISGPH-Y----D----N------TLLIVQHANVVKAARD----AG-VKHIAYTGYAFAEE---SIIPLAHVHLATEYAIR  129 (287)
T ss_dssp             CCCCC-S----C----H------HHHHHHHHHHHHHHHH----TT-CSEEEEEEETTGGG---CCSTHHHHHHHHHHHHH
T ss_pred             cCCCC-c----C----c------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCCC---CCCchHHHHHHHHHHHH
Confidence            99852 1    1    1      5788888888887753    22 56999999987752   23479999999999886


Q ss_pred             HHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC-CCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG-SLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       176 ~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      .       .+++++.++||.+.++.....+...          ......... ......+++++|+|++++.++..+.  
T Consensus       130 ~-------~~~~~~ilrp~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  190 (287)
T 2jl1_A          130 T-------TNIPYTFLRNALYTDFFVNEGLRAS----------TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--  190 (287)
T ss_dssp             H-------TTCCEEEEEECCBHHHHSSGGGHHH----------HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--
T ss_pred             H-------cCCCeEEEECCEeccccchhhHHHH----------hhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--
Confidence            3       4899999999988665411111000          000000000 0112468899999999999997543  


Q ss_pred             ceeeEEeecCCccc
Q 023708          255 ITAHNLVIDGGYTT  268 (278)
Q Consensus       255 ~tG~~i~~dgG~~~  268 (278)
                      .+|+.+++.||..+
T Consensus       191 ~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          191 HENKTYNLVSNQPW  204 (287)
T ss_dssp             CTTEEEEECCSSCB
T ss_pred             CCCcEEEecCCCcC
Confidence            47899999998654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.84  E-value=8.3e-21  Score=162.36  Aligned_cols=197  Identities=12%  Similarity=0.049  Sum_probs=144.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|+++|++|++++|.                .+|++|.+++.++++..     ++|+|||+||
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~-----~~d~vi~~a~   65 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEI-----RPHIIIHCAA   65 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhc-----CCCEEEECCc
Confidence            79999999999999999999999999999982                38999999999988765     7999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~sK  167 (278)
                      ....     +...++++..+++|+.++.++++++.+.      ..++|++||...+.+.           .+...|+.+|
T Consensus        66 ~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK  134 (287)
T 3sc6_A           66 YTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASK  134 (287)
T ss_dssp             CCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHH
T ss_pred             ccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHH
Confidence            7532     1112467889999999999999988654      2479999998765332           2345899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhc-C---CCCCCCCCCHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS-G---SLLRGRSASIEDVAQA  243 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~edva~~  243 (278)
                      .+.+.+++.++.       ++..++|+.+.++........          ......... .   ......++.++|+|++
T Consensus       135 ~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  197 (287)
T 3sc6_A          135 YAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKT----------MIRLGKEREEISVVADQIGSPTYVADLNVM  197 (287)
T ss_dssp             HHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHH----------HHHHHTTCSEEEEECSCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHH----------HHHHHHcCCCeEeecCcccCceEHHHHHHH
Confidence            999999987643       457888888766532211110          001111000 0   0012456789999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCccc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++++....    +..+++.+|...
T Consensus       198 ~~~~~~~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          198 INKLIHTSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             HHHHHTSCC----CEEEECCCBSCE
T ss_pred             HHHHHhCCC----CCeEEEcCCCcc
Confidence            999997654    568888887643

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=6.5e-21  Score=165.20  Aligned_cols=214  Identities=18%  Similarity=0.232  Sum_probs=149.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           19 VAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++|||||+|+||++++++|+++  |++|++++|..+...      ++.++.+|++|.+++.+++++     .++|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEK-----YSIDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHH-----TTCCEEEEC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhh-----cCCcEEEEC
Confidence            3899999999999999999998  899999988643221      456889999999999888874     279999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC------------CCchhh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL------------ASHAYS  164 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~Y~  164 (278)
                      ||....      ...++++..+++|+.++.++++++.+.    + .+++|++||...+.+..            ....|+
T Consensus        70 a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~  138 (317)
T 3ajr_A           70 AGILSA------KGEKDPALAYKVNMNGTYNILEAAKQH----R-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFG  138 (317)
T ss_dssp             CCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHH
T ss_pred             CcccCC------ccccChHHHhhhhhHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHH
Confidence            986421      123567889999999999999987652    2 56999999988764321            356899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChh----------hHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM----------LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                      .+|++.+.+++.++.++   |++++.++|+.+..+.          ....+..........        ..........+
T Consensus       139 ~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  207 (317)
T 3ajr_A          139 VTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYK--------CYLAPNRALPM  207 (317)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEE--------ECSCTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCce--------eecCccceeee
Confidence            99999999999988765   7999999854443211          111110000000000        00000011235


Q ss_pred             CCHHHHHHHHHHhccCCC-CCceeeEEeecCC
Q 023708          235 ASIEDVAQAALFLASEEA-GFITAHNLVIDGG  265 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~-~~~tG~~i~~dgG  265 (278)
                      +.++|+|++++.++..+. ...+|+.+++.|+
T Consensus       208 i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          208 MYMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             eEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence            678999999998886443 2335688888763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.83  E-value=6.9e-21  Score=163.72  Aligned_cols=204  Identities=14%  Similarity=0.043  Sum_probs=146.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++|||||+|+||++++++|+ +|++|++++|...            ++.+|++|.+++.++++..     ++|+|||+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~   63 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKL-----RPDVIVNAAA   63 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhc-----CCCEEEECcc
Confidence            69999999999999999999 8999999998751            4578999999998888753     6999999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-----------CCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-----------ASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~~sK  167 (278)
                      .....     ...+++++.+++|+.++.++++++.+.      ..++|++||...+.+..           ....|+.+|
T Consensus        64 ~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK  132 (299)
T 1n2s_A           64 HTAVD-----KAESEPELAQLLNATSVEAIAKAANET------GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTK  132 (299)
T ss_dssp             CCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTTT------TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHH
T ss_pred             cCCHh-----hhhcCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHH
Confidence            64211     112456788999999999999877432      24899999987654322           245899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC----CCCCCCCCHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS----LLRGRSASIEDVAQA  243 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~edva~~  243 (278)
                      .+.+.+++.++.       +++.++|+.+.++.......          ............    .....+..++|+|++
T Consensus       133 ~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  195 (299)
T 1n2s_A          133 LAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAK----------TMLRLAKERQTLSVINDQYGAPTGAELLADC  195 (299)
T ss_dssp             HHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH----------HHHHHHHHCSEEEEECSCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHH----------HHHHHHhcCCCEEeecCcccCCeeHHHHHHH
Confidence            999999987642       78899999987764221110          001111111000    012346679999999


Q ss_pred             HHHhccCCCCCc-eeeEEeecCCccc
Q 023708          244 ALFLASEEAGFI-TAHNLVIDGGYTT  268 (278)
Q Consensus       244 ~~~l~s~~~~~~-tG~~i~~dgG~~~  268 (278)
                      +++++....... .|+.+++.+|...
T Consensus       196 ~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          196 TAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             HHHHHHHhccccccCceEEEeCCCCC
Confidence            999996542223 5788999887643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=6.3e-20  Score=175.55  Aligned_cols=170  Identities=19%  Similarity=0.185  Sum_probs=126.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH----HHHHHHh--hhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE----LGAALAS--TIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~----~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..+++|++|||||+|+||++++++|+++|++|++++|...    ....+..  ..++.++.+|++|.+++++++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            4567899999999999999999999999999999987532    1222211  235778999999999998888642   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------  156 (278)
                        ++|+||||||.....     ...++..+.+++|+.++.++++++...    + .+++|++||...+..          
T Consensus        84 --~~D~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           84 --KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQY----N-VSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             --CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             --CCCEEEECCcccCcC-----ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECcHHHhCCCccccccCCc
Confidence              799999999964211     112344678999999999988766542    2 579999999876421          


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCC
Q 023708          157 -----GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPS  198 (278)
Q Consensus       157 -----~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t  198 (278)
                           ......|+.+|++++.+++.++.++ ..++++..++|+.+..
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG  197 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG  197 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccC
Confidence                 1134589999999999999998875 3589999998866543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.1e-19  Score=166.63  Aligned_cols=221  Identities=11%  Similarity=0.010  Sum_probs=153.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHc---CCeEEEEecchHHHHHHH---h-----------------hhCCeEEEec
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAEN---GAHIVIADILDELGAALA---S-----------------TIGGRYIHCD   69 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~---g~~Vi~~~r~~~~~~~~~---~-----------------~~~~~~~~~D   69 (278)
                      ...++|+||||||+|+||++++++|+++   |++|++++|.++......   +                 ..++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4567899999999999999999999999   999999999754332211   1                 1257788999


Q ss_pred             CC------CHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCc
Q 023708           70 VT------KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKG  143 (278)
Q Consensus        70 ~~------~~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~  143 (278)
                      ++      +.+++.++++       ++|+||||||....         +.+++.+++|+.++.++++++..    .+ .+
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~  207 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT----TK-LK  207 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS----SS-CC
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh----CC-CC
Confidence            98      5566776665       59999999997532         23346789999999998887653    22 46


Q ss_pred             EEEEecCchhhcCCCC----------------------CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh
Q 023708          144 SIICTSSSAAIMGGLA----------------------SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML  201 (278)
Q Consensus       144 ~iv~vsS~~~~~~~~~----------------------~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~  201 (278)
                      ++|++||...+.....                      ...|+.||.+.+.+++.++.+.   |++++.++||.+.++..
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSS
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCc
Confidence            8999999776432111                      1349999999999999998875   79999999998865421


Q ss_pred             -------HHHHHhhhccCCCCHHHHHHHHh-hc-CCC------------CCCCCCCHHHHHHHHHHhccCC--CCCceee
Q 023708          202 -------VNAYRKYLGKADMKPEEVCKMVR-DS-GSL------------LRGRSASIEDVAQAALFLASEE--AGFITAH  258 (278)
Q Consensus       202 -------~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~------------~~~~~~~~edva~~~~~l~s~~--~~~~tG~  258 (278)
                             ..++.          ........ .. +..            ....++.++|+|++++.++...  .....|+
T Consensus       285 ~~g~~~~~~~~~----------~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~  354 (478)
T 4dqv_A          285 YAGQLNMSDWVT----------RMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFA  354 (478)
T ss_dssp             SSSCCCTTBHHH----------HHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEE
T ss_pred             cCCcCCHHHHHH----------HHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCc
Confidence                   01110          00111111 11 100            0124578999999999987541  1234578


Q ss_pred             EEeecCCcc
Q 023708          259 NLVIDGGYT  267 (278)
Q Consensus       259 ~i~~dgG~~  267 (278)
                      .+++-++..
T Consensus       355 ~ynv~~~~~  363 (478)
T 4dqv_A          355 TYHVMNPHD  363 (478)
T ss_dssp             EEEESCCCC
T ss_pred             eEEecCCCC
Confidence            899987764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.82  E-value=1.4e-19  Score=154.53  Aligned_cols=198  Identities=18%  Similarity=0.063  Sum_probs=138.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           19 VAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++|||||+|+||++++++|+++  |++|++++|+.+....+.. .++.++.+|++|.+++.++++       ++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQ-------GVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTT-------TCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHh-------CCCEEEEe
Confidence            3899999999999999999998  9999999998665444432 357889999999998888765       68999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHH
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARS  176 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~  176 (278)
                      ||.. .         +       .|+.++.++++++...    + .+++|++||..++   +....|+.+|.+.+.+++.
T Consensus        73 a~~~-~---------~-------~~~~~~~~l~~a~~~~----~-~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A           73 SSSE-V---------G-------QRAPQHRNVINAAKAA----G-VKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD  127 (286)
T ss_dssp             C-------------------------CHHHHHHHHHHHH----T-CCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH
T ss_pred             CCCC-c---------h-------HHHHHHHHHHHHHHHc----C-CCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH
Confidence            9842 1         0       2566666666655432    3 5799999998875   2234799999999998864


Q ss_pred             HHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCce
Q 023708          177 TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFIT  256 (278)
Q Consensus       177 l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~t  256 (278)
                             .+++++.++||.+.++...... ....         ..............+++++|+|+++++++..+.  .+
T Consensus       128 -------~~~~~~ilrp~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  188 (286)
T 2zcu_A          128 -------SGIVYTLLRNGWYSENYLASAP-AALE---------HGVFIGAAGDGKIASATRADYAAAAARVISEAG--HE  188 (286)
T ss_dssp             -------HCSEEEEEEECCBHHHHHTTHH-HHHH---------HTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CT
T ss_pred             -------cCCCeEEEeChHHhhhhHHHhH-Hhhc---------CCceeccCCCCccccccHHHHHHHHHHHhcCCC--CC
Confidence                   3899999999988665421110 0000         000000000122467899999999999997543  47


Q ss_pred             eeEEeecCCccc
Q 023708          257 AHNLVIDGGYTT  268 (278)
Q Consensus       257 G~~i~~dgG~~~  268 (278)
                      |+.+++.||..+
T Consensus       189 g~~~~i~~~~~~  200 (286)
T 2zcu_A          189 GKVYELAGDSAW  200 (286)
T ss_dssp             TCEEEECCSSCB
T ss_pred             CceEEEeCCCcC
Confidence            899999998654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.82  E-value=3.6e-20  Score=159.96  Aligned_cols=221  Identities=15%  Similarity=0.090  Sum_probs=149.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++++|||||+|+||++++++|+++|+      +...      ....+.++.+|++|.+++.++++..     ++|+|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~V   65 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------DWVFVSSKDADLTDTAQTRALFEKV-----QPTHV   65 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------EEEECCTTTCCTTSHHHHHHHHHHS-----CCSEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------cccccCceecccCCHHHHHHHHhhc-----CCCEE
Confidence            45778999999999999999999999998      1100      0112334578999999999888752     69999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------------C
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------------G  157 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~  157 (278)
                      ||+|+....    .....+++.+.+++|+.++.++++++...    + .+++|++||...+..                .
T Consensus        66 ih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  136 (319)
T 4b8w_A           66 IHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPH  136 (319)
T ss_dssp             EECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCC
T ss_pred             EECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEEcchhhcCCCCCCCccccccccCCCC
Confidence            999997421    11122456778999999999998887543    2 469999999876522                1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH----HHhhcCC-----
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK----MVRDSGS-----  228 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----  228 (278)
                      +....|+.+|.+.+.+++.++.+.   ++++..++|+.+.++......    .....-+.-...    .......     
T Consensus       137 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          137 NSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNI----EDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCT----TTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCC----ccccccHHHHHHHHHHhccCCceEEeCC
Confidence            222369999999999999998876   799999999988766421000    000000011111    1111100     


Q ss_pred             -CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 -LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 -~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                       .....++.++|+|++++.++.... ...|+.+++.+|...
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEV  249 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCE
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCce
Confidence             011345799999999999986532 245778888776543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.82  E-value=9.2e-21  Score=162.13  Aligned_cols=206  Identities=11%  Similarity=0.065  Sum_probs=148.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++++|||| +|+||++++++|+++|++|++++|+.+..     ..++.++.+|++|.+++.++++      +++|+|||
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih   69 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVH------LRPEILVY   69 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGG------GCCSEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhc------CCCCEEEE
Confidence            457899999 59999999999999999999999986542     2357789999999998887765      36999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYS  164 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~  164 (278)
                      +||..          ..++...+++|+.++.++++++.    +.+ .+++|++||...+...           .....|+
T Consensus        70 ~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  134 (286)
T 3gpi_A           70 CVAAS----------EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG  134 (286)
T ss_dssp             CHHHH----------HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH
T ss_pred             eCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh
Confidence            99852          14457788999999999888775    222 5799999998765322           2355899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      .+|.+.+.+ +..        ++++.++|+.+.++........... .   +      .. ........++.++|+|+++
T Consensus       135 ~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~-~---~------~~-~~~~~~~~~i~v~Dva~~~  194 (286)
T 3gpi_A          135 KRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT-P---E------QW-PARNAWTNRIHRDDGAAFI  194 (286)
T ss_dssp             HHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC-G---G------GS-CSSBCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh-c---c------cC-CCcCceeEEEEHHHHHHHH
Confidence            999999988 542        7899999998877754433322211 0   0      00 0011224578899999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +.++..+.....|+.+++.+|...
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          195 AYLIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             HHHHHHHTTSCCCSEEEECCSCCE
T ss_pred             HHHHhhhccCCCCceEEEeCCCCC
Confidence            999976433456889999887653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.81  E-value=1.3e-20  Score=163.29  Aligned_cols=210  Identities=15%  Similarity=0.106  Sum_probs=141.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH----HHHHHHh---hhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE----LGAALAS---TIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~----~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +++++++|||||+|+||++++++|+++|++|++++|...    ....+..   ..++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            356789999999999999999999999999999998754    1111111   011233444443               


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC---------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG---------  157 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------  157 (278)
                        ++|+|||+||........     ++....++ |+.++.++++++...    + .+++|++||...+...         
T Consensus        69 --~~d~vi~~a~~~~~~~~~-----~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E~~  135 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRSF-----KQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPEDS  135 (321)
T ss_dssp             --TEEEEEECCCCCCHHHHT-----TSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             --cCCEEEECCccCChHHHH-----hCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCCCC
Confidence              699999999975321111     12234556 999999998888654    2 4699999998875432         


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHHHHCCCCc-EEEEecCCCCCChhhHH--HHHhhhccCCCCHHHHHHHHhhcC-C---
Q 023708          158 --LASHAYSLSKEAIIGLARSTACELGKHGI-RVNCISPHGVPSEMLVN--AYRKYLGKADMKPEEVCKMVRDSG-S---  228 (278)
Q Consensus       158 --~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i-~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~---  228 (278)
                        .....|+.+|.+.+.+++.++.+.   ++ +++.++|+.+.++....  ..          +........... .   
T Consensus       136 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~  202 (321)
T 3vps_A          136 PLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPDALV----------PRLCANLLTRNELPVEG  202 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTTSHH----------HHHHHHHHHHSEEEEET
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCCCCChH----------HHHHHHHHcCCCeEEeC
Confidence              224689999999999999988763   78 99999999887664221  00          011111111110 0   


Q ss_pred             --CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 --LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 --~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                        .....+++++|+|++++.++.....   | .+++.+|...
T Consensus       203 ~~~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          203 DGEQRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             TSCCEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             CCCceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence              0123567899999999999976643   7 9999988753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.80  E-value=1.8e-19  Score=166.27  Aligned_cols=218  Identities=14%  Similarity=0.076  Sum_probs=150.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH---HHHHh--------------hhCCeEEEecCCCHHHHHHH
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG---AALAS--------------TIGGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~---~~~~~--------------~~~~~~~~~D~~~~~~i~~~   79 (278)
                      .++||||||+|+||++++++|.+.|++|+++.|.....   ..+.+              ..++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            48999999999999999999999999999999876522   11111              125788999999977776  


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh--hcC-
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA--IMG-  156 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~--~~~-  156 (278)
                            ...++|+|||||+....        ..++...+++|+.++.++++++.+     + .+++|++||...  ... 
T Consensus       228 ------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEECT
T ss_pred             ------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCCcc
Confidence                  34589999999996522        145677889999999999998765     1 569999999877  100 


Q ss_pred             ---------------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHH
Q 023708          157 ---------------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCK  221 (278)
Q Consensus       157 ---------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
                                     ......|+.+|.+.+.+++.++.    .|++++.++||.+.++.....+.     .......+..
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~  358 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHM-----RNIKTNRFSM  358 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCC-----TTCTTCHHHH
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCccc-----CCcchHHHHH
Confidence                           11356899999999999988653    48999999999887664221100     0000000111


Q ss_pred             HHhh---cCCCC------CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          222 MVRD---SGSLL------RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       222 ~~~~---~~~~~------~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+..   ....+      ...+++++|+|++++.++....   .|+.+++.+|..+
T Consensus       359 ~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          359 VMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             HHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            1111   00011      1246789999999999997654   7889999988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=8.5e-19  Score=150.81  Aligned_cols=209  Identities=12%  Similarity=0.032  Sum_probs=137.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHH-HHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGA-ALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +|++|||||+|+||++++++|+++| ++|++++|+.+... ......++.++.+|++|.+++.++++       ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN-------GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh-------cCCEEE
Confidence            4789999999999999999999999 99999999864432 11123367889999999999888775       699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--CCCCchhhhhHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAIIG  172 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sK~a~~~  172 (278)
                      ||+|.....             ..+.|+.+...++    +.+.+.+ .+++|++|+......  ......|+.+|.+++.
T Consensus        78 ~~a~~~~~~-------------~~~~~~~~~~~~~----~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           78 IVTNYWESC-------------SQEQEVKQGKLLA----DLARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEE  139 (299)
T ss_dssp             ECCCHHHHT-------------CHHHHHHHHHHHH----HHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHH
T ss_pred             EeCCCCccc-------------cchHHHHHHHHHH----HHHHHcC-CCEEEEEcCccccccCCCcccCchhhHHHHHHH
Confidence            999853110             1234444444444    4444433 578999766554321  1224579999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++.       .|++++.++||.+.++........... .+... ..  ... . ......+++++|+|++++.++..+.
T Consensus       140 ~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~-~g~~~-~~--~~~-~-~~~~~~~i~~~Dva~~~~~~l~~~~  206 (299)
T 2wm3_A          140 YFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAP-DGKSY-LL--SLP-T-GDVPMDGMSVSDLGPVVLSLLKMPE  206 (299)
T ss_dssp             HHHH-------HTCCEEEEECCEEGGGGGTTTCCEECT-TSSSE-EE--CCC-C-TTSCEEEECGGGHHHHHHHHHHSHH
T ss_pred             HHHH-------CCCCEEEEeecHHhhhchhhcCCcccC-CCCEE-EE--Eec-C-CCCccceecHHHHHHHHHHHHcChh
Confidence            8864       279999999999988754311100000 00000 00  000 0 0011246799999999999996532


Q ss_pred             CCceeeEEeecC
Q 023708          253 GFITAHNLVIDG  264 (278)
Q Consensus       253 ~~~tG~~i~~dg  264 (278)
                       ...|+.+++.|
T Consensus       207 -~~~g~~~~~~g  217 (299)
T 2wm3_A          207 -KYVGQNIGLST  217 (299)
T ss_dssp             -HHTTCEEECCS
T ss_pred             -hhCCeEEEeee
Confidence             23678888876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.77  E-value=7.8e-18  Score=144.03  Aligned_cols=197  Identities=13%  Similarity=0.058  Sum_probs=132.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++|||||+|+||++++++|.+. |++|++++|+.+....+. ..++.++.+|++|.+++.++++       ++|+|||+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQESMVEAFK-------GMDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCHHHHHHHTT-------TCSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCHHHHHHHHh-------CCCEEEEeC
Confidence            4999999999999999999998 999999999876544332 2367899999999998888775       799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST  177 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  177 (278)
                      |.....               ..|+.+...    +++.+.+.+ .+++|++||.......    .|..++...  +.+  
T Consensus        74 ~~~~~~---------------~~~~~~~~~----l~~aa~~~g-v~~iv~~Ss~~~~~~~----~~~~~~~~~--~~e--  125 (289)
T 3e48_A           74 SIIHPS---------------FKRIPEVEN----LVYAAKQSG-VAHIIFIGYYADQHNN----PFHMSPYFG--YAS--  125 (289)
T ss_dssp             CCCCSH---------------HHHHHHHHH----HHHHHHHTT-CCEEEEEEESCCSTTC----CSTTHHHHH--HHH--
T ss_pred             CCCccc---------------hhhHHHHHH----HHHHHHHcC-CCEEEEEcccCCCCCC----CCccchhHH--HHH--
Confidence            864210               124445444    444444433 5799999996543222    233333211  222  


Q ss_pred             HHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCC----CCCHHHHHHHHHHhccCCCC
Q 023708          178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR----SASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       178 ~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~edva~~~~~l~s~~~~  253 (278)
                       ..+...|++++.++||.+.++...... ..           ..  ......+.++    +++++|+|++++.++..+..
T Consensus       126 -~~~~~~g~~~~ilrp~~~~~~~~~~~~-~~-----------~~--~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~  190 (289)
T 3e48_A          126 -RLLSTSGIDYTYVRMAMYMDPLKPYLP-EL-----------MN--MHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT  190 (289)
T ss_dssp             -HHHHHHCCEEEEEEECEESTTHHHHHH-HH-----------HH--HTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG
T ss_pred             -HHHHHcCCCEEEEeccccccccHHHHH-HH-----------HH--CCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc
Confidence             222335899999999999887643211 10           00  1111112222    78999999999999976654


Q ss_pred             CceeeEEeecCCcccC
Q 023708          254 FITAHNLVIDGGYTTG  269 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~~  269 (278)
                      +  |+.+++. |..+.
T Consensus       191 ~--g~~~~~~-~~~~s  203 (289)
T 3e48_A          191 W--GKRYLLS-GYSYD  203 (289)
T ss_dssp             T--TCEEEEC-CEEEE
T ss_pred             C--CceEEeC-CCcCC
Confidence            3  8899998 76543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.76  E-value=2.7e-18  Score=151.33  Aligned_cols=211  Identities=12%  Similarity=0.035  Sum_probs=137.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHH--HHHHhhhCCeEEEec-CCCHHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELG--AALASTIGGRYIHCD-VTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~--~~~~~~~~~~~~~~D-~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+++++||||+|+||++++++|+++|++|++++|+.+..  ..+....++.++.+| ++|.+++.++++       ++|+
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~d~   76 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE-------GAHL   76 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh-------cCCE
Confidence            467899999999999999999999999999999876543  333322356788999 999999888775       6899


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch-hhcCCCCCchhhhhHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA-AIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ||||++...                .+.|..+ .++++++    .+.++.+++|++||.. ...+.+....|+.+|++.+
T Consensus        77 Vi~~a~~~~----------------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E  135 (352)
T 1xgk_A           77 AFINTTSQA----------------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVE  135 (352)
T ss_dssp             EEECCCSTT----------------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHH
T ss_pred             EEEcCCCCC----------------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHHHHH
Confidence            999987431                0224444 4444444    3322146999999986 3444444568999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC--CCCCCCCCCH-HHHHHHHHHhc
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG--SLLRGRSASI-EDVAQAALFLA  248 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-edva~~~~~l~  248 (278)
                      .+++.+       +++++.++||.+-+....... ...........   .......  ......++++ +|+|++++.++
T Consensus       136 ~~~~~~-------gi~~~ivrpg~~g~~~~~~~~-~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l  204 (352)
T 1xgk_A          136 NYVRQL-------GLPSTFVYAGIYNNNFTSLPY-PLFQMELMPDG---TFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  204 (352)
T ss_dssp             HHHHTS-------SSCEEEEEECEEGGGCBSSSC-SSCBEEECTTS---CEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHc-------CCCEEEEecceecCCchhccc-ccccccccCCC---ceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence            998752       799999999976433211000 00000000000   0000000  0001235678 89999999999


Q ss_pred             cCCCCCceeeEEeecCC
Q 023708          249 SEEAGFITAHNLVIDGG  265 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG  265 (278)
                      ........|+.+++.++
T Consensus       205 ~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          205 KDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHCHHHHTTCEEEECSE
T ss_pred             hCCchhhCCeEEEEecC
Confidence            75433456888888864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.74  E-value=7.9e-18  Score=143.69  Aligned_cols=197  Identities=9%  Similarity=-0.044  Sum_probs=136.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++||||| |+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+            ..++|+|||+|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~------------~~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS------------LDGVTHLLIST   71 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC------------CTTCCEEEECC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc------------cCCCCEEEECC
Confidence            67999998 999999999999999999999998876655543 46788999999833            35799999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-CCCcEEEEecCchhhcCC-----------CCCchhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSSSAAIMGG-----------LASHAYSL  165 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~  165 (278)
                      +.....        +.              ..+.++..+.+. .+.+++|++||...+...           .....|+.
T Consensus        72 ~~~~~~--------~~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~  129 (286)
T 3ius_A           72 APDSGG--------DP--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGR  129 (286)
T ss_dssp             CCBTTB--------CH--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHH
T ss_pred             Cccccc--------cH--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHH
Confidence            865321        00              013334444431 125799999998765322           22347999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|.+.+.+++.+      .+++++.++|+.+.++..... .... .. ...       .....-....++.++|+|++++
T Consensus       130 sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~-~~~~-~~-~~~-------~~~~~~~~~~~i~v~Dva~a~~  193 (286)
T 3ius_A          130 WRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPF-SKLG-KG-GIR-------RIIKPGQVFSRIHVEDIAQVLA  193 (286)
T ss_dssp             HHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSS-TTSS-SS-CCC-------EEECTTCCBCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhh------cCCCEEEEeccceECCCchHH-HHHh-cC-Ccc-------ccCCCCcccceEEHHHHHHHHH
Confidence            999999999876      589999999999877643211 0000 00 000       0000001235678899999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      .++....   .|+.+++.+|....
T Consensus       194 ~~~~~~~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          194 ASMARPD---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             HHHHSCC---TTCEEEECCSCCBC
T ss_pred             HHHhCCC---CCCEEEEeCCCCcc
Confidence            9997654   68899999887543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.73  E-value=8.1e-18  Score=149.00  Aligned_cols=196  Identities=20%  Similarity=0.156  Sum_probs=138.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++|||||+|+||++++++|+++|+ +|+..+|.                    .|.++++++++       ++|+|||+|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~-------~~d~Vih~a   54 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALL-------KADFIVHLA   54 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHH-------HCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhc-------cCCEEEECC
Confidence            699999999999999999999998 77765553                    78888888876       499999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHH
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST  177 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  177 (278)
                      |....         +++...+++|+.++.++++++.    +.+...++|++||...+.    ...|+.+|.+.+.+++.+
T Consensus        55 ~~~~~---------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           55 GVNRP---------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             CSBCT---------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHH
T ss_pred             cCCCC---------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHH
Confidence            97532         2334567889999988888764    223224899999988765    568999999999999999


Q ss_pred             HHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCC-----CCCCCCCHHHHHHHHHHhccCCC
Q 023708          178 ACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL-----LRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       178 ~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      +++.   ++++..++|+.+.++.....+..      .-+.-...........     ....++.++|+|++++.++....
T Consensus       118 ~~~~---g~~~~i~R~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          118 AEEY---GNTVYIYRWPNLFGKWCKPNYNS------VIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHH---CCCEEEEEECEEECTTCCTTSSC------HHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHh---CCCEEEEECCceeCCCCCCCcch------HHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            8886   68899999988876532210000      0000011111111000     11246779999999999997553


Q ss_pred             CCceeeEEeecCCccc
Q 023708          253 GFITAHNLVIDGGYTT  268 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~  268 (278)
                      . ..|+.+++.+|...
T Consensus       189 ~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          189 T-IENGVPTVPNVFKV  203 (369)
T ss_dssp             C-EETTEECCSCCEEE
T ss_pred             c-cCCceEEeCCCCce
Confidence            2 24788888887554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.71  E-value=4.2e-17  Score=140.51  Aligned_cols=201  Identities=15%  Similarity=0.130  Sum_probs=129.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-------HHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD-------ELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-------~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++...+.  ...++.++.+|++|.+++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh------
Confidence            46799999999999999999999999999999975       4443332  22467899999999998888775      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----CCCCCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----GGLASHA  162 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----~~~~~~~  162 (278)
                       ++|+|||++|...                    +.+...+++++.    +.+..+++|. |+.....     ..+....
T Consensus        76 -~~d~vi~~a~~~~--------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  129 (307)
T 2gas_A           76 -QVDIVICAAGRLL--------------------IEDQVKIIKAIK----EAGNVKKFFP-SEFGLDVDRHDAVEPVRQV  129 (307)
T ss_dssp             -TCSEEEECSSSSC--------------------GGGHHHHHHHHH----HHCCCSEEEC-SCCSSCTTSCCCCTTHHHH
T ss_pred             -CCCEEEECCcccc--------------------cccHHHHHHHHH----hcCCceEEee-cccccCcccccCCCcchhH
Confidence             6999999998642                    234444555443    3221357763 3322111     1222457


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      | .+|++++.+.+.       .+++++.++||.+.+.+...........  ...... .... . ......+++++|+|+
T Consensus       130 y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~-~-~~~~~~~i~~~Dva~  196 (307)
T 2gas_A          130 F-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATD--PPRDKV-VILG-D-GNVKGAYVTEADVGT  196 (307)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSS--CCSSEE-EEET-T-SCSEEEEECHHHHHH
T ss_pred             H-HHHHHHHHHHHH-------cCCCeEEEEcceeecccccccccccccc--CCCCeE-EEec-C-CCcceEEeeHHHHHH
Confidence            8 999999988763       2789999999998876543211000000  000000 0000 0 001234679999999


Q ss_pred             HHHHhccCCCCCceeeEEeecC
Q 023708          243 AALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      +++.++.++.  ..|+.+.+.|
T Consensus       197 ~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          197 FTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHcCcc--ccCceEEEeC
Confidence            9999997543  2367777765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.69  E-value=6.6e-17  Score=142.49  Aligned_cols=218  Identities=9%  Similarity=0.019  Sum_probs=140.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-----CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG-----AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g-----~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|||||+|+||++++++|+++|     ++|++++|......  ....++.++.+|++|.+++.++++.    .+++|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSP----LTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTT----CTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhc----CCCCC
Confidence            4789999999999999999999999     99999998754321  1123577899999999988877652    22499


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEE-------EecCchhhcCC-------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSII-------CTSSSAAIMGG-------  157 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv-------~vsS~~~~~~~-------  157 (278)
                      +|||+||...          +++...+++|+.++.++++++.+...   +..++|       ++||...+...       
T Consensus        75 ~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~  141 (364)
T 2v6g_A           75 HVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQTGRKHYMGPFESYGKIESHDPPY  141 (364)
T ss_dssp             EEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEECCTHHHHCCGGGTTTSCCCCSSB
T ss_pred             EEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEeccCceEEEechhhccccccCCCCC
Confidence            9999999641          24577899999999999998876421   145676       68887654221       


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHHHHCCCC-cEEEEecCCCCCChhhHHHHHhhhccCCCCHH-HHHHHH--hhc
Q 023708          158 -------LASHAYSLSKEAIIGLARSTACELGKHG-IRVNCISPHGVPSEMLVNAYRKYLGKADMKPE-EVCKMV--RDS  226 (278)
Q Consensus       158 -------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~-i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~  226 (278)
                             +....|    .+.+.+++.++.+   .+ +++..++|+.+..+.........      .+. -.....  ...
T Consensus       142 ~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~g~  208 (364)
T 2v6g_A          142 TEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNIFGFSPYSMMNLV------GTLCVYAAICKHEGK  208 (364)
T ss_dssp             CTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSEECCCTTCSSCHH------HHHHHHHHHHHHHTC
T ss_pred             CccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCceeCCCCCcccchH------HHHHHHHHHHHhcCC
Confidence                   112345    2345555554432   45 99999999988765321100000      000 001110  111


Q ss_pred             C-CCC--------CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          227 G-SLL--------RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       227 ~-~~~--------~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      . .++        .-...+++|+|++++.++....  ..|+.+++.+|..+
T Consensus       209 ~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          209 VLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVF  257 (364)
T ss_dssp             CBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCB
T ss_pred             ceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcC
Confidence            0 001        0134556999999999986442  36889999888643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=1.4e-16  Score=139.80  Aligned_cols=206  Identities=11%  Similarity=0.044  Sum_probs=135.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch----HHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD----ELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~----~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |..+++|||||+|+||++++++|++.|++|++++|+.    +....+.  ...++.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            3457899999999999999999999999999999965    3333222  2346889999999999999888752     


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc----CCCCCchhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM----GGLASHAYS  164 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~  164 (278)
                      ++|+|||++|..                    |+.+..++++++...    +...++|+ |+.....    +.+....|+
T Consensus        83 ~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~----g~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           83 EIDIVVSTVGGE--------------------SILDQIALVKAMKAV----GTIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH----CCCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             CCCEEEECCchh--------------------hHHHHHHHHHHHHHc----CCceEEee-cccCCCCCccCcCCCcchHH
Confidence            799999999861                    778888888776653    21346665 4433221    123445899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      .+|.+++.+.+.       .|+++..++||.+...................  ..  .+.... .....++.++|+|+++
T Consensus       138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~--~~--~~~g~g-~~~~~~i~~~Dva~~~  205 (346)
T 3i6i_A          138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTD--FF--QIYGDG-NVKAYFVAGTDIGKFT  205 (346)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSS--CE--EEETTS-CCCEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCc--eE--EEccCC-CceEEecCHHHHHHHH
Confidence            999999888865       47999999999886643221110000000000  00  000000 0123478999999999


Q ss_pred             HHhccCCCCCceeeEEeecC
Q 023708          245 LFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dg  264 (278)
                      +.++..+.  ..|+.+.+-|
T Consensus       206 ~~~l~~~~--~~~~~~~i~g  223 (346)
T 3i6i_A          206 MKTVDDVR--TLNKSVHFRP  223 (346)
T ss_dssp             HHHTTCGG--GTTEEEECCC
T ss_pred             HHHHhCcc--ccCeEEEEeC
Confidence            99997652  2356666653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=1.3e-16  Score=138.41  Aligned_cols=201  Identities=11%  Similarity=0.063  Sum_probs=127.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch------HHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD------ELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .++++||||+|+||++++++|+++|++|++++|+.      +....+.  ...++.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            35799999999999999999999999999999975      2322221  23468899999999999888876       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--C---CCCchh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--G---LASHAY  163 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~---~~~~~Y  163 (278)
                      ++|+|||+++...                    +.+...+++++.    +.+..+++| .|+......  .   +....|
T Consensus        77 ~~d~vi~~a~~~~--------------------~~~~~~l~~aa~----~~g~v~~~v-~S~~g~~~~~~~~~~p~~~~y  131 (321)
T 3c1o_A           77 QVDIVISALPFPM--------------------ISSQIHIINAIK----AAGNIKRFL-PSDFGCEEDRIKPLPPFESVL  131 (321)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHH----HHCCCCEEE-CSCCSSCGGGCCCCHHHHHHH
T ss_pred             CCCEEEECCCccc--------------------hhhHHHHHHHHH----HhCCccEEe-ccccccCccccccCCCcchHH
Confidence            5999999998531                    333444444443    322135776 333221110  1   113478


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                       .+|++++.+++.       .+++++.++||.+.+........ .. .......... ... . ......+++++|+|++
T Consensus       132 -~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~-~~-~~~~~~~~~~-~~~-~-~~~~~~~i~~~Dva~~  198 (321)
T 3c1o_A          132 -EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLH-PS-PHPNRNDDIV-IYG-T-GETKFVLNYEEDIAKY  198 (321)
T ss_dssp             -HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHC-CC-SSCCTTSCEE-EET-T-SCCEEEEECHHHHHHH
T ss_pred             -HHHHHHHHHHHH-------cCCCeEEEEeceecccccccccc-cc-ccccccCceE-Eec-C-CCcceeEeeHHHHHHH
Confidence             999999988863       26888899999886654432211 00 0000000000 000 0 0012346899999999


Q ss_pred             HHHhccCCCCCceeeEEeecC
Q 023708          244 ALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ++.++..+.  ..|+.+.+.|
T Consensus       199 ~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          199 TIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHhCcc--ccCeEEEEeC
Confidence            999997553  2377788875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.66  E-value=9.3e-17  Score=139.22  Aligned_cols=198  Identities=12%  Similarity=0.090  Sum_probs=125.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+++|||||+|+||++++++|+++|++|++++|+.+ ....+.  ...++.++.+|++|.+++.++++       ++|+|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            367999999999999999999999999999999753 222221  23467899999999999888875       69999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--C---CCCchhhhhHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--G---LASHAYSLSKE  168 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~---~~~~~Y~~sK~  168 (278)
                      ||+++...                    +.+...+++++    .+.+..+++|+ |+......  .   +....| .+|.
T Consensus        84 i~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           84 ISALAFPQ--------------------ILDQFKILEAI----KVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             EECCCGGG--------------------STTHHHHHHHH----HHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             EECCchhh--------------------hHHHHHHHHHH----HhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHH
Confidence            99998531                    22333444443    33221357764 43321111  1   113468 9999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      +++.+.+.       .++++..++||.+................  .   .  ..... ......+++++|+|++++.++
T Consensus       138 ~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~--~---~--~~~~~-~~~~~~~i~~~Dva~~~~~~l  202 (318)
T 2r6j_A          138 MIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKD--E---I--TVYGT-GEAKFAMNYEQDIGLYTIKVA  202 (318)
T ss_dssp             HHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCS--E---E--EEETT-SCCEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCC--c---e--EEecC-CCceeeEeeHHHHHHHHHHHh
Confidence            99888764       47889999999876554332221100000  0   0  00000 001234678999999999999


Q ss_pred             cCCCCCceeeEEeecC
Q 023708          249 SEEAGFITAHNLVIDG  264 (278)
Q Consensus       249 s~~~~~~tG~~i~~dg  264 (278)
                      ..+..  .|+.+.+.|
T Consensus       203 ~~~~~--~~~~~~~~g  216 (318)
T 2r6j_A          203 TDPRA--LNRVVIYRP  216 (318)
T ss_dssp             TCGGG--TTEEEECCC
T ss_pred             cCccc--cCeEEEecC
Confidence            75532  256677654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=1.9e-16  Score=136.71  Aligned_cols=206  Identities=13%  Similarity=0.101  Sum_probs=130.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-----hHHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL-----DELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-----~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++++||||+|+||++++++|+++|++|++++|+     .+....+.  ...++.++.+|++|.+++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            3679999999999999999999999999999997     33333322  22357889999999999888775       6


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------CCCCchh
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------GLASHAY  163 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------~~~~~~Y  163 (278)
                      +|+|||++|.....                .|+.+...+++++.    +.++.+++|+ |+......      .+....|
T Consensus        77 ~d~vi~~a~~~~~~----------------~~~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y  135 (313)
T 1qyd_A           77 VDVVISALAGGVLS----------------HHILEQLKLVEAIK----EAGNIKRFLP-SEFGMDPDIMEHALQPGSITF  135 (313)
T ss_dssp             CSEEEECCCCSSSS----------------TTTTTHHHHHHHHH----HSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH
T ss_pred             CCEEEECCccccch----------------hhHHHHHHHHHHHH----hcCCCceEEe-cCCcCCccccccCCCCCcchH
Confidence            99999999865221                25666666665553    3222457774 43332111      2335578


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                       .+|.+++.+.+.       .+++++.++||.+.+.......... .......... . ..... .....+++++|+|++
T Consensus       136 -~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~g-~~~~~~i~~~Dva~~  203 (313)
T 1qyd_A          136 -IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLD-GHMMPPRDKV-L-IYGDG-NVKGIWVDEDDVGTY  203 (313)
T ss_dssp             -HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTT-CCSSCCSSEE-C-CBTTS-CSEEEEECHHHHHHH
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEeceecccccccccccc-ccccCCCCeE-E-EeCCC-CceEEEEEHHHHHHH
Confidence             999999988753       4788999999988654322110000 0000000000 0 00000 011346789999999


Q ss_pred             HHHhccCCCCCceeeEEeecC
Q 023708          244 ALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ++.++..+.  ..|+.+.+.|
T Consensus       204 ~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          204 TIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHhCcc--cCCceEEEeC
Confidence            999997553  2366677765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.64  E-value=1.7e-15  Score=139.97  Aligned_cols=212  Identities=11%  Similarity=-0.040  Sum_probs=138.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++||||||+|+||+++++.|+++|++|++++|+....         ..+.+|+.+..         .+.+.++|+|||+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~~~---------~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLNPA---------SDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTSCC---------TTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccchh---------HHhcCCCCEEEEC
Confidence            57899999999999999999999999999999986431         23677886431         2233579999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSL  165 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~  165 (278)
                      ||....    ...+.+.....+++|+.++.++++++..   + .+.+++|++||...+..           ......|+.
T Consensus       209 A~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~  280 (516)
T 3oh8_A          209 AGEPIF----GRFNDSHKEAIRESRVLPTKFLAELVAE---S-TQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAE  280 (516)
T ss_dssp             CCC---------CCGGGHHHHHHHTHHHHHHHHHHHHH---C-SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHH
T ss_pred             CCCccc----cccchhHHHHHHHHHHHHHHHHHHHHHh---c-CCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHH
Confidence            996422    1344567788999999999999997442   2 22579999999876531           113446888


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|...+.+.+.    ....|++++.++||.+.++.. ..+.......  .... ......  ......++.++|+|++++
T Consensus       281 ~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~-~~~~~~~~~~--~~g~-~~~~g~--g~~~~~~i~v~Dva~ai~  350 (516)
T 3oh8_A          281 VCRDWEHATAP----ASDAGKRVAFIRTGVALSGRG-GMLPLLKTLF--STGL-GGKFGD--GTSWFSWIAIDDLTDIYY  350 (516)
T ss_dssp             HHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTB-SHHHHHHHTT--C----CCCCTT--SCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCC-ChHHHHHHHH--HhCC-CcccCC--CCceEceEeHHHHHHHHH
Confidence            88877766543    234589999999999987642 1111000000  0000 000000  001135678999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcc
Q 023708          246 FLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .++....  ..| .+++-+|..
T Consensus       351 ~~l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          351 RAIVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             HHHHCTT--CCE-EEEESCSCC
T ss_pred             HHHhCcc--cCC-cEEEECCCC
Confidence            9996543  345 566666543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.62  E-value=3.7e-16  Score=134.63  Aligned_cols=201  Identities=14%  Similarity=0.122  Sum_probs=125.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch------HHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD------ELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .++++||||+|+||++++++|+++|++|++++|+.      +....+.  ...++.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            36799999999999999999999999999999863      2222221  22367889999999999988876       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----CCCCchh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----GLASHAY  163 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~Y  163 (278)
                      ++|+|||+++...                    +.+...+++++.    +.+..+++|+ |+......     .+....|
T Consensus        77 ~~d~vi~~a~~~~--------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y  131 (308)
T 1qyc_A           77 NVDVVISTVGSLQ--------------------IESQVNIIKAIK----EVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF  131 (308)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHH----HHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH
T ss_pred             CCCEEEECCcchh--------------------hhhHHHHHHHHH----hcCCCceEee-cccccCccccccCCcchhHH
Confidence            6999999998531                    233344444443    3222457763 44332211     1223468


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                       .+|.+++.+.+.       .+++++.++||.+.+........ .. .........  ..... ......+.+++|+|++
T Consensus       132 -~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~~--~~~~~-~~~~~~~i~~~Dva~~  198 (308)
T 1qyc_A          132 -EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQ-AG-LTAPPRDKV--VILGD-GNARVVFVKEEDIGTF  198 (308)
T ss_dssp             -HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTC-TT-CSSCCSSEE--EEETT-SCCEEEEECHHHHHHH
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEeceecccccccccc-cc-ccCCCCCce--EEecC-CCceEEEecHHHHHHH
Confidence             999999888764       26888899999876543221110 00 000000000  00000 0011346789999999


Q ss_pred             HHHhccCCCCCceeeEEeecC
Q 023708          244 ALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dg  264 (278)
                      ++.++..+.  ..|+.+.+.|
T Consensus       199 ~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          199 TIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHhCcc--ccCeEEEEeC
Confidence            999997543  2366777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.46  E-value=4.3e-13  Score=115.04  Aligned_cols=208  Identities=16%  Similarity=0.001  Sum_probs=127.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      +||||||+|.||++++++|.++|++|+++.|+...          ..+..|     .   +.   .+...++|.+||.||
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~----------~~~~~~-----~---~~---~~~l~~~d~vihla~   60 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP----------GRITWD-----E---LA---ASGLPSCDAAVNLAG   60 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT----------TEEEHH-----H---HH---HHCCCSCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc----------Ceeecc-----h---hh---HhhccCCCEEEEecc
Confidence            49999999999999999999999999999986431          012222     1   11   123357999999998


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~sK  167 (278)
                      .. ...+....+.......++.|+.++-.+.+.+...   ..+...+|+.||...+.+.           .....|+..|
T Consensus        61 ~~-i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~  136 (298)
T 4b4o_A           61 EN-ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLV  136 (298)
T ss_dssp             CC-SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHH
T ss_pred             Cc-ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHH
Confidence            53 2223445667777888999999988777655443   1223457777777665322           1223345444


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH---HHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV---NAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ...+..     ......++++..+.||.+..+...   ..............        ... .....++.++|+++++
T Consensus       137 ~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~--------g~g-~~~~~~ihv~Dva~a~  202 (298)
T 4b4o_A          137 TKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPI--------GSG-HQFFPWIHIGDLAGIL  202 (298)
T ss_dssp             HHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCB--------TTS-CSBCCEEEHHHHHHHH
T ss_pred             HHHHHH-----HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCccee--------ccc-CceeecCcHHHHHHHH
Confidence            444322     223456899999999988766321   11100000000000        000 0123457899999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+++..+.  ..| .+++-++...
T Consensus       203 ~~~~~~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          203 THALEANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             HHHHHCTT--CCE-EEEESCSCCC
T ss_pred             HHHHhCCC--CCC-eEEEECCCcc
Confidence            99986543  445 7777776654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.43  E-value=3.4e-14  Score=121.56  Aligned_cols=106  Identities=19%  Similarity=0.248  Sum_probs=82.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++|++|||||++|+|+++++.|+++|++|++++|+.++.+++.+++    ++.++.+|+++.++++++++       .
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~  188 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------G  188 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------T
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------h
Confidence            478999999999999999999999999999999999987776665433    45678899999998877765       5


Q ss_pred             ccEEEECCccCCCCCCcccCCH-HHHHHHHHHHhHHHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNM-EDVKFLLSVNLNGIL  126 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~-~~~~~~~~~N~~~~~  126 (278)
                      +|+||||+|......++.+.+. ++++..+++|+.+++
T Consensus       189 ~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          189 AHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            8999999986422223323332 455567788887776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.28  E-value=1.2e-11  Score=107.72  Aligned_cols=146  Identities=12%  Similarity=0.082  Sum_probs=101.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecch--HHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADILD--ELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ++++||||+|+||.+++..|+++|+       .|++.++.+  +........+   ...++ .|+.+.+++.+.++    
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~----   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK----   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC----
Confidence            4699999999999999999999996       799998864  2222111111   12233 57765544444442    


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh---h----c--C
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA---I----M--G  156 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~---~----~--~  156 (278)
                         +.|+|||.||....+    .   ++..+.+++|+.++..+++++...-   +...+++++|+...   .    .  +
T Consensus        80 ---~~D~Vih~Ag~~~~~----~---~~~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           80 ---DADYALLVGAAPRKA----G---MERRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             ---TCSEEEECCCCCCCT----T---CCHHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             ---CCCEEEECCCcCCCC----C---CCHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHHHHHHHcCC
Confidence               699999999975321    1   2235678999999999988887652   11458888887652   1    1  2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHH
Q 023708          157 GLASHAYSLSKEAIIGLARSTACEL  181 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~  181 (278)
                      .+....|+.+|...+.+...++..+
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~  171 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT  171 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             CChhheeccchHHHHHHHHHHHHHh
Confidence            3445579999999999999988876

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.16  E-value=9.2e-11  Score=95.82  Aligned_cols=153  Identities=14%  Similarity=0.055  Sum_probs=92.2

Q ss_pred             CCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHH
Q 023708           14 RLTGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE   77 (278)
Q Consensus        14 ~l~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~   77 (278)
                      +|+||++|||||                |||||+++|++|+++|++|+++++... +.     .....-.+|+++.+   
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~~g~~~~dv~~~~---   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TPPFVKRVDVMTAL---   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CCTTEEEEECCSHH---
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cCCCCeEEccCcHH---
Confidence            689999999999                689999999999999999999877542 10     01112356887754   


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL--LSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM  155 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~  155 (278)
                      ++++.+.+.++++|++|||||+... .+. +...+.+.+.  -+.++.-.+.....+++.+.+....+.+++        
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d~-~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~V--------  145 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVADY-RAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVV--------  145 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCSE-EES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEE--------
T ss_pred             HHHHHHHHhcCCCCEEEECCcccCC-CCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEE--------
Confidence            4566677788999999999997632 232 2222222220  122344444555666777765321233321        


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH  194 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG  194 (278)
                      +++   .+.      +.+.+....++.++|+.+...+|-
T Consensus       146 GFa---aEt------~~l~e~A~~kL~~k~~d~ivaN~~  175 (226)
T 1u7z_A          146 GFA---AET------NNVEEYARQKRIRKNLDLICANDV  175 (226)
T ss_dssp             EEE---EES------SSHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             Ecc---hhh------chHHHHHHHHHHhcCCCEEEEeec
Confidence            111   111      235556666666667666666554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=2.7e-09  Score=77.99  Aligned_cols=73  Identities=21%  Similarity=0.208  Sum_probs=63.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++++|+|+ |++|+++++.|.+.| ++|++++|+++..+.+. ..++.++.+|+++.+++.++++       ++|++|+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   75 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALG-------GFDAVIS   75 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHc-------CCCEEEE
Confidence            578999999 999999999999999 89999999988777665 3467788999999888777664       7999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +++
T Consensus        76 ~~~   78 (118)
T 3ic5_A           76 AAP   78 (118)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            986

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.97  E-value=1.1e-10  Score=95.61  Aligned_cols=93  Identities=10%  Similarity=0.154  Sum_probs=64.7

Q ss_pred             CCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHH
Q 023708           16 TGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA   79 (278)
Q Consensus        16 ~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   79 (278)
                      +||++|||||                ||++|.++|++|+++|++|++++|.....    ..........|+.   ++.++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~----~~~~~~~~~~~v~---s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK----PEPHPNLSIREIT---NTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC----CCCCTTEEEEECC---SHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCCCeEEEEHh---HHHHH
Confidence            5899999999                78899999999999999999999864311    0001112234444   46666


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHH
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF  116 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~  116 (278)
                      ++.+.+.++++|++|+|||+... .+....+.+++.+
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD~-~p~~~~~~e~~~~  110 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSDY-TPVYMTGLEEVQA  110 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCSE-EEEEEEEHHHHHH
T ss_pred             HHHHHHhcCCCCEEEEcCccccc-cchhhcchhhhhc
Confidence            67777778899999999998633 4444444555443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.72  E-value=3.4e-08  Score=89.36  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=64.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++|+++||| +|++|+++++.|++.|++|++++|+.++.+++.+.++ +..+.+|+++.+++.++++       ++|+||
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-------~~DvVI   73 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHDLVI   73 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-------TSSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-------CCcEEE
Confidence            468899998 7999999999999999999999999887776655443 5577899999988877764       699999


Q ss_pred             ECCccC
Q 023708           95 NNAGIS  100 (278)
Q Consensus        95 ~nag~~  100 (278)
                      ||++..
T Consensus        74 n~a~~~   79 (450)
T 1ff9_A           74 SLIPYT   79 (450)
T ss_dssp             ECCC--
T ss_pred             ECCccc
Confidence            999853

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.70  E-value=1e-07  Score=85.13  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=66.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC---CeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           18 KVAVITGGARGIGAATAKLFAENG---AHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g---~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+|| |+||+++++.|++.|   ..|++++|+.++.+++.+.+      ++.++.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57899999 899999999999998   48999999998888777654      3678899999999999998865     


Q ss_pred             CccEEEECCcc
Q 023708           89 QLDIMFNNAGI   99 (278)
Q Consensus        89 ~id~li~nag~   99 (278)
                      ++|+||||+|.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999974

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.70  E-value=3.2e-08  Score=87.34  Aligned_cols=107  Identities=21%  Similarity=0.294  Sum_probs=77.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.+++++|+|+ |+||+++++.|...|++|++++|+.++.+.+.+..+.. +.+|.++.++++++++       +.|++
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~-------~~DvV  233 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQ-------HADLL  233 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHH-------HCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHh-------CCCEE
Confidence            578899999999 99999999999999999999999988777665544443 5678888887777664       58999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |++++.....                    .+..+.+..++.|++   .+.+|++++..
T Consensus       234 i~~~g~~~~~--------------------~~~li~~~~l~~mk~---gg~iV~v~~~~  269 (369)
T 2eez_A          234 IGAVLVPGAK--------------------APKLVTRDMLSLMKE---GAVIVDVAVDQ  269 (369)
T ss_dssp             EECCC---------------------------CCSCHHHHTTSCT---TCEEEECC---
T ss_pred             EECCCCCccc--------------------cchhHHHHHHHhhcC---CCEEEEEecCC
Confidence            9999864211                    112345666666643   57999998764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.70  E-value=4.6e-08  Score=78.47  Aligned_cols=103  Identities=19%  Similarity=0.260  Sum_probs=72.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++|||||++|||.++++.+...|++|++++|++++.+.+.+ .+... .+|.++.+..+.+.+...  .+++|++|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~~~-~~d~~~~~~~~~~~~~~~--~~~~D~vi~  113 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEY-VGDSRSVDFADEILELTD--GYGVDVVLN  113 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCCSE-EEETTCSTHHHHHHHHTT--TCCEEEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE-EeeCCcHHHHHHHHHHhC--CCCCeEEEE
Confidence            57899999999999999999999999999999998877655543 34332 357777654444433221  136999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |+|.            +               ..+.+++.++.   .|++|++++..
T Consensus       114 ~~g~------------~---------------~~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          114 SLAG------------E---------------AIQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             CCCT------------H---------------HHHHHHHTEEE---EEEEEECSCGG
T ss_pred             CCch------------H---------------HHHHHHHHhcc---CCEEEEEcCCC
Confidence            9862            1               12345555544   58999998765

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.69  E-value=3.8e-08  Score=85.55  Aligned_cols=79  Identities=24%  Similarity=0.323  Sum_probs=61.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++|||||++|||.++++.+...|++|+++++++++.+.+ ++++.. ..+|.++.+++.+.+.++..  +++|++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~-~~~d~~~~~~~~~~~~~~~~--~~~d~vi~  220 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD-AAFNYKTVNSLEEALKKASP--DGYDCYFD  220 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS-EEEETTSCSCHHHHHHHHCT--TCEEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc-EEEecCCHHHHHHHHHHHhC--CCCeEEEE
Confidence            579999999999999999999999999999999988777666 444543 34587774445555554433  57999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      |+|
T Consensus       221 ~~g  223 (333)
T 1v3u_A          221 NVG  223 (333)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            998

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.69  E-value=3.2e-09  Score=97.95  Aligned_cols=101  Identities=23%  Similarity=0.298  Sum_probs=68.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++.+++.+.++...+.  +.+   +.++      ..+.+|+|
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~--~~d---l~~~------~~~~~Dil  428 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALS--LTD---LDNY------HPEDGMVL  428 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CEE--TTT---TTTC--------CCSEEE
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceee--HHH---hhhc------cccCceEE
Confidence            567899999999 59999999999999999999999988888887766433322  222   1100      11358999


Q ss_pred             EECCccCCCC----CCcccCCHHHHHHHHHHHhHHHH
Q 023708           94 FNNAGISGSG----GSITSLNMEDVKFLLSVNLNGIL  126 (278)
Q Consensus        94 i~nag~~~~~----~~~~~~~~~~~~~~~~~N~~~~~  126 (278)
                      |||+|+....    .++.+.+.++|...+++|+.+..
T Consensus       429 VN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          429 ANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             EECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             EECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            9999974321    35566667778889999997653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.63  E-value=1.5e-07  Score=85.33  Aligned_cols=80  Identities=20%  Similarity=0.251  Sum_probs=65.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .++++++++|+|+ |++|++++..|++. |++|++++|+.++.+++.+..++.++.+|+.+.+++.++++       ++|
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-------~~D   90 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-------DND   90 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-------TSS
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-------CCC
Confidence            3567889999998 99999999999998 78999999998888877665456677899999888877765       699


Q ss_pred             EEEECCccC
Q 023708           92 IMFNNAGIS  100 (278)
Q Consensus        92 ~li~nag~~  100 (278)
                      +|||+++..
T Consensus        91 vVIn~tp~~   99 (467)
T 2axq_A           91 VVISLIPYT   99 (467)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCchh
Confidence            999999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.63  E-value=3.1e-08  Score=76.67  Aligned_cols=74  Identities=23%  Similarity=0.254  Sum_probs=58.1

Q ss_pred             CChhHHHHHHHHHHcCCeEEEEecchHHH------HHHHhhhC--CeEEEecCCCH--HHHHHHHHHHHhhcCCccEEEE
Q 023708           26 ARGIGAATAKLFAENGAHIVIADILDELG------AALASTIG--GRYIHCDVTKE--EDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        26 s~giG~~ia~~L~~~g~~Vi~~~r~~~~~------~~~~~~~~--~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++-++.++++.|++.|++|+++.|.++..      .+..+..+  ...+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            34578999999999999999987754321      22333334  34567899999  9999999999998999 99999


Q ss_pred             CCccC
Q 023708           96 NAGIS  100 (278)
Q Consensus        96 nag~~  100 (278)
                      |||..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.53  E-value=2.2e-10  Score=103.28  Aligned_cols=44  Identities=25%  Similarity=0.429  Sum_probs=38.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA   58 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~   58 (278)
                      .+.||+++|||++ +||+++|+.|...|++|+++++++....+..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5789999999987 9999999999999999999999876655443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.47  E-value=3.7e-07  Score=79.01  Aligned_cols=104  Identities=12%  Similarity=0.196  Sum_probs=73.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++|||||++|||.++++.+...|++|+++++++++.+.+.+ ++.. ..+|.++.+..+++.+...  .+++|++|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~--~~~~D~vi~  215 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW-QVINYREEDLVERLKEITG--GKKVRVVYD  215 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS-EEEETTTSCHHHHHHHHTT--TCCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC-EEEECCCccHHHHHHHHhC--CCCceEEEE
Confidence            57999999999999999999999999999999998877666544 4433 2357766654444443321  136999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      |+| . .                         ..+.+++.++.   .|++|.+++...
T Consensus       216 ~~g-~-~-------------------------~~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          216 SVG-R-D-------------------------TWERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             CSC-G-G-------------------------GHHHHHHTEEE---EEEEEECCCTTC
T ss_pred             CCc-h-H-------------------------HHHHHHHHhcC---CCEEEEEecCCC
Confidence            998 2 1                         02444555543   589999987643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.47  E-value=4.4e-07  Score=79.25  Aligned_cols=104  Identities=22%  Similarity=0.281  Sum_probs=75.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+|++++||.++++.+...|++|++++|++++.+.+. +++.. ...|.++.+++.+.+.++.+.  ++|++|+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~-~~~d~~~~~~~~~~~~~~~~~--~~D~vi~  244 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGE-VFIDFTKEKDIVGAVLKATDG--GAHGVIN  244 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCC-EEEETTTCSCHHHHHHHHHTS--CEEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCc-eEEecCccHhHHHHHHHHhCC--CCCEEEE
Confidence            5789999999999999999999999999999998877765443 34543 235877655666666655433  7999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |+|..           +               .++.+++.++.   .|++|.+++..
T Consensus       245 ~~g~~-----------~---------------~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          245 VSVSE-----------A---------------AIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             CSSCH-----------H---------------HHHHHTTSEEE---EEEEEECCCCT
T ss_pred             CCCcH-----------H---------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence            99731           0               23445555543   58999988754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.47  E-value=3e-07  Score=80.15  Aligned_cols=80  Identities=20%  Similarity=0.293  Sum_probs=61.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+.++++... ..|.++.+++.+.++++..  +++|++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~--~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFP--NGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCT--TCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhC--CCCcEEEE
Confidence            57899999999999999999999999999999999887776654455432 3476654445455544432  47999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      |+|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            987

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.46  E-value=2.8e-07  Score=78.48  Aligned_cols=75  Identities=28%  Similarity=0.246  Sum_probs=57.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC-----eEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+.++.     ..+.+|+.+.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 999999998877776554321     0112444441          34567


Q ss_pred             CccEEEECCccC
Q 023708           89 QLDIMFNNAGIS  100 (278)
Q Consensus        89 ~id~li~nag~~  100 (278)
                      ++|+||||+|..
T Consensus       193 ~~DilVn~ag~~  204 (287)
T 1nvt_A          193 GVDIIINATPIG  204 (287)
T ss_dssp             TCCEEEECSCTT
T ss_pred             CCCEEEECCCCC
Confidence            899999999975

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.45  E-value=1.2e-06  Score=66.06  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=61.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++.++|+|+ |.+|.++++.|.++|++|++++++++..+.+.+. +..++.+|.++++.++++      ...+.|.+|.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~------~~~~~d~vi~   76 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSL------DLEGVSAVLI   76 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHS------CCTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhC------CcccCCEEEE
Confidence            3467999998 7799999999999999999999999887776553 577889999998876654      1236899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.+
T Consensus        77 ~~~   79 (141)
T 3llv_A           77 TGS   79 (141)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            765

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.44  E-value=3.2e-07  Score=69.14  Aligned_cols=76  Identities=20%  Similarity=0.234  Sum_probs=58.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++++.++|+|+ |++|..+++.|.+.|++|++++++++..+.+.+ ....++.+|.++.+.+.++      ..++.|++|
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~------~~~~~d~vi   75 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSL------GIRNFEYVI   75 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTT------TGGGCSEEE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhc------CCCCCCEEE
Confidence            45678999998 999999999999999999999998776655433 2456678899887655443      123699999


Q ss_pred             ECCc
Q 023708           95 NNAG   98 (278)
Q Consensus        95 ~nag   98 (278)
                      ++++
T Consensus        76 ~~~~   79 (144)
T 2hmt_A           76 VAIG   79 (144)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9986

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.43  E-value=7.7e-07  Score=77.22  Aligned_cols=80  Identities=15%  Similarity=0.242  Sum_probs=59.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++|||||++|||.++++.+...|++|+++++++++.+.+.+ ++.. ..+|.++.+..+++.+...  ..++|++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~-~~~d~~~~~~~~~i~~~~~--~~~~d~vi~  220 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCH-HTINYSTQDFAEVVREITG--GKGVDVVYD  220 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCS-EEEETTTSCHHHHHHHHHT--TCCEEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCC-EEEECCCHHHHHHHHHHhC--CCCCeEEEE
Confidence            57899999999999999999999999999999999877666543 4433 2357766554444433221  136999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      |+|.
T Consensus       221 ~~g~  224 (333)
T 1wly_A          221 SIGK  224 (333)
T ss_dssp             CSCT
T ss_pred             CCcH
Confidence            9983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.43  E-value=5.8e-07  Score=78.77  Aligned_cols=102  Identities=22%  Similarity=0.226  Sum_probs=72.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++|||||++|||.++++.+...|+ +|+++++++++.+.+.+.++.. ..+|.++.+..+. +.+...  +++|++|+|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~-~~~~~~--~~~d~vi~~  237 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQ-LRESCP--AGVDVYFDN  237 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHH-HHHHCT--TCEEEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHH-HHHhcC--CCCCEEEEC
Confidence            8999999999999999999999999 9999999887777666545543 2357766443333 222221  269999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +|.            +               .++.+++.++.   .|++|.++....
T Consensus       238 ~G~------------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  264 (357)
T 2zb4_A          238 VGG------------N---------------ISDTVISQMNE---NSHIILCGQISQ  264 (357)
T ss_dssp             CCH------------H---------------HHHHHHHTEEE---EEEEEECCCGGG
T ss_pred             CCH------------H---------------HHHHHHHHhcc---CcEEEEECCccc
Confidence            982            1               12344555543   589999887654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.42  E-value=2e-06  Score=73.88  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=62.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc---hHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL---DELGAALASTIG----GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~---~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+++.    +.+...++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            4678999999998 7999999999999998 89999999   777777665432    3344567777666665544   


Q ss_pred             hhcCCccEEEECCcc
Q 023708           85 SWKGQLDIMFNNAGI   99 (278)
Q Consensus        85 ~~~g~id~li~nag~   99 (278)
                          ..|+|||+...
T Consensus       226 ----~aDiIINaTp~  236 (315)
T 3tnl_A          226 ----ESVIFTNATGV  236 (315)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----CCCEEEECccC
Confidence                68999998764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.41  E-value=8e-07  Score=77.87  Aligned_cols=80  Identities=18%  Similarity=0.283  Sum_probs=59.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||++|||.++++.+...|++|+++++++++.+.+ ++++.. ..+|..+.+..+++.+...  .+++|++|+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vi~  237 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA-AGFNYKKEDFSEATLKFTK--GAGVNLILD  237 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS-EEEETTTSCHHHHHHHHTT--TSCEEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc-EEEecCChHHHHHHHHHhc--CCCceEEEE
Confidence            578999999999999999999999999999999988777666 444543 2356666554444333211  136999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      |+|.
T Consensus       238 ~~G~  241 (354)
T 2j8z_A          238 CIGG  241 (354)
T ss_dssp             SSCG
T ss_pred             CCCc
Confidence            9983

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.40  E-value=8e-07  Score=74.95  Aligned_cols=74  Identities=11%  Similarity=0.145  Sum_probs=56.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC--eEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++.  .....|+   +++       .+  +++|
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~-------~~--~~~D  182 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DEL-------EG--HEFD  182 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGG-------TT--CCCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHh-------cc--CCCC
Confidence            568899999998 7999999999999999999999998888777665432  1222332   221       11  5899


Q ss_pred             EEEECCccC
Q 023708           92 IMFNNAGIS  100 (278)
Q Consensus        92 ~li~nag~~  100 (278)
                      +||+|++..
T Consensus       183 ivVn~t~~~  191 (271)
T 1nyt_A          183 LIINATSSG  191 (271)
T ss_dssp             EEEECCSCG
T ss_pred             EEEECCCCC
Confidence            999999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.40  E-value=9.1e-07  Score=76.83  Aligned_cols=104  Identities=20%  Similarity=0.240  Sum_probs=74.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||+++||.++++.+...|++|+++++++++.+.+.++++... ..|..+.+..+.+.+. .  .+++|++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~-~--~~~~d~vi~  224 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRE-C--PKGIDVFFD  224 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHH-C--TTCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHh-c--CCCceEEEE
Confidence            58999999999999999999999999999999999888777745555432 3466665433333322 1  247999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      |+|.            +               .++.+++.++.   .|++|.++....
T Consensus       225 ~~g~------------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  252 (336)
T 4b7c_A          225 NVGG------------E---------------ILDTVLTRIAF---KARIVLCGAISQ  252 (336)
T ss_dssp             SSCH------------H---------------HHHHHHTTEEE---EEEEEECCCGGG
T ss_pred             CCCc------------c---------------hHHHHHHHHhh---CCEEEEEeeccc
Confidence            9973            1               12334444443   689999987664

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.39  E-value=1.1e-06  Score=76.89  Aligned_cols=79  Identities=14%  Similarity=0.232  Sum_probs=58.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||++|+|.++++.+...|++|+++++++++.+.+ ++++.. ..+|..+.+..+++.+.. . .+++|++|+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~-~~~d~~~~~~~~~~~~~~-~-~~~~D~vi~  245 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAH-EVFNHREVNYIDKIKKYV-G-EKGIDIIIE  245 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS-EEEETTSTTHHHHHHHHH-C-TTCEEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcCCC-EEEeCCCchHHHHHHHHc-C-CCCcEEEEE
Confidence            578999999999999999999999999999999988777644 344543 235766655444433322 1 126999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      |+|
T Consensus       246 ~~G  248 (351)
T 1yb5_A          246 MLA  248 (351)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            997

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.35  E-value=1.8e-06  Score=74.83  Aligned_cols=147  Identities=14%  Similarity=0.043  Sum_probs=95.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecc----hHHHHHHHhhh-C--CeEEEecCCCHHHHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADIL----DELGAALASTI-G--GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~----~~~~~~~~~~~-~--~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      .+++||||+|.+|.+++..|+..|.       .|++.+++    +++.+.....+ .  ..+ ..|+....+..+.+   
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al---   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAF---   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHT---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHh---
Confidence            5799999999999999999999885       79999888    54343321111 1  111 23444333344433   


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-------c-
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-------M-  155 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-------~-  155 (278)
                          ...|++||.||.....    ..+.   .+.+..|+.....+++.+...-   +.++++|++|.....       . 
T Consensus        82 ----~~aD~Vi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t~~~~~~~  147 (329)
T 1b8p_A           82 ----KDADVALLVGARPRGP----GMER---KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNAYIAMKSA  147 (329)
T ss_dssp             ----TTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             ----CCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHHHHHHHHc
Confidence                3799999999964321    1222   3467888888777777666542   125789999885521       1 


Q ss_pred             -CCCCCchhhhhHHHHHHHHHHHHHHHC
Q 023708          156 -GGLASHAYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       156 -~~~~~~~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                       ++|....|+.++.--..+...++..+.
T Consensus       148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          148 PSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             334444688887766777778887774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.28  E-value=5.3e-06  Score=62.06  Aligned_cols=75  Identities=28%  Similarity=0.359  Sum_probs=59.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+..+..++..|.++.+.+.+.      ...+.|++|++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~------~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA------GIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT------TTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHc------CcccCCEEEEe
Confidence            357899987 99999999999999999999999988777776555666778898887654331      12368999998


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .+
T Consensus        77 ~~   78 (140)
T 1lss_A           77 TG   78 (140)
T ss_dssp             CS
T ss_pred             eC
Confidence            64

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.27  E-value=1.7e-06  Score=76.03  Aligned_cols=100  Identities=15%  Similarity=0.222  Sum_probs=70.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch---HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD---ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++++++||+|+ |++|..+++.+...|++|+++++++   ++.+.+ ++++...+  | .+ + +.+.+.+ ..  +++
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~ga~~v--~-~~-~-~~~~~~~-~~--~~~  247 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETKTNYY--N-SS-N-GYDKLKD-SV--GKF  247 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHTCEEE--E-CT-T-CSHHHHH-HH--CCE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhCCcee--c-hH-H-HHHHHHH-hC--CCC
Confidence            456999999999 9999999999999999999999987   665443 45566555  6 55 2 2222222 22  579


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHH-HHHHHHHHccCCCcEEEEecCch
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI-KHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |++|+++|...                          .+ +.+++.++.   .|++|+++...
T Consensus       248 d~vid~~g~~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~~  281 (366)
T 2cdc_A          248 DVIIDATGADV--------------------------NILGNVIPLLGR---NGVLGLFGFST  281 (366)
T ss_dssp             EEEEECCCCCT--------------------------HHHHHHGGGEEE---EEEEEECSCCC
T ss_pred             CEEEECCCChH--------------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence            99999998421                          12 445555543   57999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.22  E-value=4.3e-06  Score=72.92  Aligned_cols=80  Identities=18%  Similarity=0.286  Sum_probs=57.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .++++||||++++||..+++.+... |++|+++++++++.+.+. +++... ..|..+.+..+++ .++... +++|++|
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~-~~~~~~-~~~d~vi  245 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADY-VINASMQDPLAEI-RRITES-KGVDAVI  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSE-EEETTTSCHHHHH-HHHTTT-SCEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCE-EecCCCccHHHHH-HHHhcC-CCceEEE
Confidence            5789999999999999999999999 999999999887766554 344332 2466654433332 222211 5799999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      +|+|.
T Consensus       246 ~~~g~  250 (347)
T 1jvb_A          246 DLNNS  250 (347)
T ss_dssp             ESCCC
T ss_pred             ECCCC
Confidence            99983

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.19  E-value=1.1e-05  Score=72.86  Aligned_cols=82  Identities=24%  Similarity=0.379  Sum_probs=60.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCe-EEE---ecCC---------CHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-YIH---CDVT---------KEEDVESAVRL   82 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~---~D~~---------~~~~i~~~~~~   82 (278)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+. +++.. ++.   .|+.         +.++++++.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            5799999999999999999999999999999998887776653 44532 222   1221         12445556666


Q ss_pred             HHhhcC-CccEEEECCc
Q 023708           83 AVSWKG-QLDIMFNNAG   98 (278)
Q Consensus        83 ~~~~~g-~id~li~nag   98 (278)
                      +.+..+ ++|++|+++|
T Consensus       299 v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHSSCCSEEEECSC
T ss_pred             HHHHhCCCceEEEECCC
Confidence            666555 6999999987

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.18  E-value=1.3e-05  Score=61.22  Aligned_cols=76  Identities=11%  Similarity=0.117  Sum_probs=58.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++.++|+|+ |.+|+.+++.|.+.|++|++++++ ++..+.+.+..  ++.++..|.++++.+++.      ...+.|.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            4567889986 999999999999999999999997 45555554433  577889999998876654      1136899


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.+.+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            987764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.17  E-value=6.6e-06  Score=71.62  Aligned_cols=104  Identities=15%  Similarity=0.203  Sum_probs=72.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+|+++++|..+++.+...|++|+++++++++.+.+. +++... .+|.++.+ +.+.+.+... .+++|++|+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~-~~d~~~~~-~~~~~~~~~~-~~~~d~vi~  241 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADE-TVNYTHPD-WPKEVRRLTG-GKGADKVVD  241 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE-EEETTSTT-HHHHHHHHTT-TTCEEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE-EEcCCccc-HHHHHHHHhC-CCCceEEEE
Confidence            5789999999999999999999999999999999887776654 345432 25776654 2222222211 136999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ++| . .                         ..+.+++.++.   .|++|.+++...
T Consensus       242 ~~g-~-~-------------------------~~~~~~~~l~~---~G~~v~~g~~~~  269 (343)
T 2eih_A          242 HTG-A-L-------------------------YFEGVIKATAN---GGRIAIAGASSG  269 (343)
T ss_dssp             SSC-S-S-------------------------SHHHHHHHEEE---EEEEEESSCCCS
T ss_pred             CCC-H-H-------------------------HHHHHHHhhcc---CCEEEEEecCCC
Confidence            998 3 1                         12444555544   579999887654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.16  E-value=8.6e-06  Score=71.22  Aligned_cols=79  Identities=20%  Similarity=0.287  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+.+ ++... ..|..+.+..+.+.+ ..  .+++|++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~-~~~~~~~~~~~~~~~-~~--~~g~Dvvid  241 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKR-GINYRSEDFAAVIKA-ET--GQGVDIILD  241 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE-EEETTTSCHHHHHHH-HH--SSCEEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCE-EEeCCchHHHHHHHH-Hh--CCCceEEEE
Confidence            57899999999999999999999999999999998887765544 44332 245555543333333 22  347999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      |+|.
T Consensus       242 ~~g~  245 (353)
T 4dup_A          242 MIGA  245 (353)
T ss_dssp             SCCG
T ss_pred             CCCH
Confidence            9983

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.08  E-value=2.4e-05  Score=67.05  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=59.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc---hHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL---DELGAALASTIG----GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~---~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.++++    ......++.+.+.+.+.+.   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---
Confidence            3578999999998 8999999999999998 79999999   777777665442    3334456666433333333   


Q ss_pred             hhcCCccEEEECCccC
Q 023708           85 SWKGQLDIMFNNAGIS  100 (278)
Q Consensus        85 ~~~g~id~li~nag~~  100 (278)
                          ..|+|||+....
T Consensus       220 ----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ----SADILTNGTKVG  231 (312)
T ss_dssp             ----HCSEEEECSSTT
T ss_pred             ----CceEEEECCcCC
Confidence                489999987653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.08  E-value=9.3e-06  Score=70.36  Aligned_cols=104  Identities=19%  Similarity=0.344  Sum_probs=71.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||++++|..+++.+...|++|+++++++++.+.+ ++++... ..|..+.+..+++.+.. . ..++|++|+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~-~~~~~~~~~~~~~~~~~-~-~~g~D~vid  223 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYGAEY-LINASKEDILRQVLKFT-N-GKGVDASFD  223 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSE-EEETTTSCHHHHHHHHT-T-TSCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcE-EEeCCCchHHHHHHHHh-C-CCCceEEEE
Confidence            578999999999999999999999999999999988777644 3445332 24555544333332221 1 126999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      |+|..                           ..+.+++.++.   .|++|.++....
T Consensus       224 ~~g~~---------------------------~~~~~~~~l~~---~G~iv~~G~~~~  251 (334)
T 3qwb_A          224 SVGKD---------------------------TFEISLAALKR---KGVFVSFGNASG  251 (334)
T ss_dssp             CCGGG---------------------------GHHHHHHHEEE---EEEEEECCCTTC
T ss_pred             CCChH---------------------------HHHHHHHHhcc---CCEEEEEcCCCC
Confidence            99841                           12344555544   689999876543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.07  E-value=9.7e-06  Score=69.99  Aligned_cols=80  Identities=16%  Similarity=0.280  Sum_probs=57.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+. +++... ..|.++.+..+++.+...  ..++|++|+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~-~~~~~~~~~~~~~~~~~~--~~g~Dvvid  215 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWE-TIDYSHEDVAKRVLELTD--GKKCPVVYD  215 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE-EEETTTSCHHHHHHHHTT--TCCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE-EEeCCCccHHHHHHHHhC--CCCceEEEE
Confidence            5789999999999999999999999999999999888776554 344332 245555443333322211  126999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      |+|.
T Consensus       216 ~~g~  219 (325)
T 3jyn_A          216 GVGQ  219 (325)
T ss_dssp             SSCG
T ss_pred             CCCh
Confidence            9984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.06  E-value=6.1e-06  Score=63.35  Aligned_cols=79  Identities=23%  Similarity=0.264  Sum_probs=58.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+..++.++|.|+ |.+|..+++.|.+.|++|++++|+++..+.+....+..++..|..+.+.+.+.      ...+.|+
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~------~~~~ad~   87 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKEC------GMEKADM   87 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTT------TGGGCSE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHc------CcccCCE
Confidence            3456788999996 99999999999999999999999887665543233556777888876544321      1236899


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.+.+
T Consensus        88 Vi~~~~   93 (155)
T 2g1u_A           88 VFAFTN   93 (155)
T ss_dssp             EEECSS
T ss_pred             EEEEeC
Confidence            998875

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.05  E-value=8e-06  Score=68.84  Aligned_cols=74  Identities=14%  Similarity=0.144  Sum_probs=55.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC--eEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.++.  .....|+   +++.       +  ++.|
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~-------~--~~~D  182 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP-------L--QTYD  182 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC-------C--SCCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc-------c--CCCC
Confidence            568899999998 7999999999999999999999998888877765432  1212332   1110       1  4799


Q ss_pred             EEEECCccC
Q 023708           92 IMFNNAGIS  100 (278)
Q Consensus        92 ~li~nag~~  100 (278)
                      +||++++..
T Consensus       183 ivIn~t~~~  191 (272)
T 1p77_A          183 LVINATSAG  191 (272)
T ss_dssp             EEEECCCC-
T ss_pred             EEEECCCCC
Confidence            999999864

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.05  E-value=2.5e-05  Score=66.06  Aligned_cols=75  Identities=23%  Similarity=0.314  Sum_probs=56.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+.     +.+...++.+   +.+.++      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            678999999998 7999999999999998 69999999888877765543     2333444433   333333      


Q ss_pred             CCccEEEECCcc
Q 023708           88 GQLDIMFNNAGI   99 (278)
Q Consensus        88 g~id~li~nag~   99 (278)
                       ..|+|||+...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             48999998864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.01  E-value=1.2e-05  Score=69.87  Aligned_cols=80  Identities=16%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+||++++|..+++.+...|++|+++++++++.+.+.+ ++... ..|..+.+..+++.+.. . ..++|++|+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~-~~~~~~~~~~~~~~~~~-~-~~g~Dvvid  219 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAY-VIDTSTAPLYETVMELT-N-GIGADAAID  219 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSE-EEETTTSCHHHHHHHHT-T-TSCEEEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcE-EEeCCcccHHHHHHHHh-C-CCCCcEEEE
Confidence            57899999999999999999988899999999988777665544 44332 23555544333332211 1 126999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      |+|.
T Consensus       220 ~~g~  223 (340)
T 3gms_A          220 SIGG  223 (340)
T ss_dssp             SSCH
T ss_pred             CCCC
Confidence            9984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.00  E-value=3.5e-05  Score=67.03  Aligned_cols=77  Identities=19%  Similarity=0.320  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~l   93 (278)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.+ ++...+ .|..  +++.   +++.+..+  ++|++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~v-~~~~--~~~~---~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGADIV-LPLE--EGWA---KAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEE-EESS--TTHH---HHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEE-ecCc--hhHH---HHHHHHhCCCCceEE
Confidence            57899999999999999999999999999999998777655544 443322 2333  2222   33333332  59999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |+|+|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999983

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.00  E-value=0.0001  Score=63.71  Aligned_cols=144  Identities=17%  Similarity=0.185  Sum_probs=86.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHH--HHHhhhCCe-EEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGA--ALASTIGGR-YIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~--~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+++||||+|.+|..++..|+++|  ..|++.+++++...  ++... ... -+.. +.+..++.+.++       ..|+
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~-~~~~~v~~-~~~t~d~~~al~-------gaDv   79 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHM-DTGAVVRG-FLGQQQLEAALT-------GMDL   79 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTS-CSSCEEEE-EESHHHHHHHHT-------TCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcc-cccceEEE-EeCCCCHHHHcC-------CCCE
Confidence            469999999999999999999998  78999887665211  12221 111 1111 223344444443       7999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh------------cCCCCC
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI------------MGGLAS  160 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~------------~~~~~~  160 (278)
                      +|+.||....++    .+.   .+.+..|+.....+++.+.+.-    .++.++++|-....            .++|..
T Consensus        80 Vi~~ag~~~~~g----~~r---~dl~~~N~~~~~~i~~~i~~~~----p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~  148 (326)
T 1smk_A           80 IIVPAGVPRKPG----MTR---DDLFKINAGIVKTLCEGIAKCC----PRAIVNLISNPVNSTVPIAAEVFKKAGTYDPK  148 (326)
T ss_dssp             EEECCCCCCCSS----CCC---SHHHHHHHHHHHHHHHHHHHHC----TTSEEEECCSSHHHHHHHHHHHHHHHTCCCTT
T ss_pred             EEEcCCcCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEECCchHHHHHHHHHHHHHccCCCcc
Confidence            999999643221    111   2447788888888777776642    24556665444433            134444


Q ss_pred             chhhhhHHHHHHHHHHHHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACEL  181 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~  181 (278)
                      ...+.+-.--..+-..++..+
T Consensus       149 rviG~~~Ld~~r~~~~la~~l  169 (326)
T 1smk_A          149 RLLGVTMLDVVRANTFVAEVL  169 (326)
T ss_dssp             SEEECCHHHHHHHHHHHHHHH
T ss_pred             cEEEEeehHHHHHHHHHHHHh
Confidence            455654333445555666665

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.97  E-value=5e-05  Score=65.29  Aligned_cols=145  Identities=14%  Similarity=0.144  Sum_probs=90.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEec--chHHHHH----HHhhhCCeEEEecCCCHH-HHHHHHHHHHhhcCC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADI--LDELGAA----LASTIGGRYIHCDVTKEE-DVESAVRLAVSWKGQ   89 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r--~~~~~~~----~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~   89 (278)
                      +++||||+|++|.+++..|+..|.  .+++.++  ++++.+.    +..........+++.+.+ ++.+.       +.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~a-------l~g   74 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI-------IDE   74 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG-------GTT
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHH-------hCC
Confidence            589999999999999999998884  5888888  6543332    221111110112332211 12222       337


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh--------cCCCCCc
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--------MGGLASH  161 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~~~~  161 (278)
                      .|++||.||....+    ..+.   .+.++.|+.....+++++...    . ++.++++|.....        .+.|...
T Consensus        75 aD~Vi~~Ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv~~~t~~~~k~~~~p~~r  142 (313)
T 1hye_A           75 SDVVIITSGVPRKE----GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPVDVMTYKALVDSKFERNQ  142 (313)
T ss_dssp             CSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSHHHHHHHHHHHHCCCTTS
T ss_pred             CCEEEECCCCCCCC----CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcHHHHHHHHHHhhCcChhc
Confidence            99999999964322    1222   345888998888887777765    3 4566666665432        2355556


Q ss_pred             hhhh-hHHHHHHHHHHHHHHHC
Q 023708          162 AYSL-SKEAIIGLARSTACELG  182 (278)
Q Consensus       162 ~Y~~-sK~a~~~l~~~l~~e~~  182 (278)
                      .++. +..-...+...++..+.
T Consensus       143 viG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          143 VFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHT
T ss_pred             EEEeCccHHHHHHHHHHHHHhC
Confidence            7787 67667777777777774

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.96  E-value=3.1e-05  Score=66.02  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=57.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.++...-  ++.+.+++       .+...+.|+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~~~~~~~-------~~~~~~aDi  207 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AYFSLAEA-------ETRLAEYDI  207 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CEECHHHH-------HHTGGGCSE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--ceeeHHHH-------HhhhccCCE
Confidence            578899999998 7999999999999998 899999999888888776543100  11122222       223347999


Q ss_pred             EEECCccC
Q 023708           93 MFNNAGIS  100 (278)
Q Consensus        93 li~nag~~  100 (278)
                      ||++.+..
T Consensus       208 vIn~t~~~  215 (297)
T 2egg_A          208 IINTTSVG  215 (297)
T ss_dssp             EEECSCTT
T ss_pred             EEECCCCC
Confidence            99999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.93  E-value=2.4e-05  Score=68.71  Aligned_cols=75  Identities=17%  Similarity=0.244  Sum_probs=56.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.++... ..|..+.+.+.+       ..+++|++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~-------~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQA-------AAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHH-------TTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHH-------hhCCCCEEEE
Confidence            6889999996 999999999998999999999988877766654555432 246666543322       2357999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9985

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.92  E-value=9.2e-05  Score=55.65  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=58.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +.++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+ .+..++..|.++++.++++      ...+.|.+|.+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLA------HLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHT------TGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhc------CcccCCEEEEEC
Confidence            45778886 889999999999999999999999988877765 4677889999998866553      112588888776


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      +
T Consensus        80 ~   80 (140)
T 3fwz_A           80 P   80 (140)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.90  E-value=6e-05  Score=65.38  Aligned_cols=101  Identities=18%  Similarity=0.211  Sum_probs=70.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+|+ +++|..+++.+...|++|+++++++++.+.+. +++... ..|.++.+ +.+.+.+.   .+++|++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-~~d~~~~~-~~~~~~~~---~~~~d~vid  236 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADL-VVNPLKED-AAKFMKEK---VGGVHAAVV  236 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSE-EECTTTSC-HHHHHHHH---HSSEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCE-EecCCCcc-HHHHHHHH---hCCCCEEEE
Confidence            5789999999 88999999999999999999999887776554 455432 35766543 22222222   257999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ++|..           +               .++.+++.++.   .|+++.+++..
T Consensus       237 ~~g~~-----------~---------------~~~~~~~~l~~---~G~~v~~g~~~  264 (339)
T 1rjw_A          237 TAVSK-----------P---------------AFQSAYNSIRR---GGACVLVGLPP  264 (339)
T ss_dssp             SSCCH-----------H---------------HHHHHHHHEEE---EEEEEECCCCS
T ss_pred             CCCCH-----------H---------------HHHHHHHHhhc---CCEEEEecccC
Confidence            98731           1               23445555544   57999987654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.89  E-value=5.4e-05  Score=65.97  Aligned_cols=79  Identities=20%  Similarity=0.133  Sum_probs=56.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++++||+||++++|..+++.+...|++|+++++++++.+.+. +++... ..|..+.+-.+++.+....  .++|++|.+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~-~~~~~~~~~~~~v~~~~~~--~g~D~vid~  240 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAH-VLNEKAPDFEATLREVMKA--EQPRIFLDA  240 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSE-EEETTSTTHHHHHHHHHHH--HCCCEEEES
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE-EEECCcHHHHHHHHHHhcC--CCCcEEEEC
Confidence            389999999999999999999899999999998887766554 345432 2455554433333332221  279999999


Q ss_pred             Ccc
Q 023708           97 AGI   99 (278)
Q Consensus        97 ag~   99 (278)
                      +|.
T Consensus       241 ~g~  243 (349)
T 3pi7_A          241 VTG  243 (349)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            873

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.89  E-value=3.5e-05  Score=60.63  Aligned_cols=78  Identities=18%  Similarity=0.142  Sum_probs=60.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.++.++|.| .|.+|..+++.|.+. |++|++++++++..+.+.+ .+..++.+|.++.+.+.++     ....+.|.
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~-----~~~~~ad~  108 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERI-----LDTGHVKL  108 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTB-----CSCCCCCE
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhc-----cCCCCCCE
Confidence            45677788998 599999999999999 9999999999888777654 3667788899987755432     01236899


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.89  E-value=3.6e-05  Score=67.61  Aligned_cols=72  Identities=14%  Similarity=0.172  Sum_probs=59.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .++|+|.|| |++|+.+++.|.+ .++|.+++++.+.++.+.+  ....+.+|++|.+++.++++       +.|+||++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~-------~~DvVi~~   84 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMK-------EFELVIGA   84 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHT-------TCSEEEEC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHh-------CCCEEEEe
Confidence            346999998 9999999998865 5899999999887776644  34578899999999888875       68999999


Q ss_pred             Ccc
Q 023708           97 AGI   99 (278)
Q Consensus        97 ag~   99 (278)
                      ++.
T Consensus        85 ~p~   87 (365)
T 3abi_A           85 LPG   87 (365)
T ss_dssp             CCG
T ss_pred             cCC
Confidence            864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.88  E-value=5.9e-05  Score=66.54  Aligned_cols=78  Identities=21%  Similarity=0.292  Sum_probs=60.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.+++++|+|+ |+||+.+++.+...|++|++.+|+.++.+.+.+..+..+ .++..+.+++.+++.       +.|++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~-------~aDvV  235 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVK-------RADLV  235 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHH-------HCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHc-------CCCEE
Confidence            578999999999 999999999999999999999999887776655444332 234455565655543       58999


Q ss_pred             EECCccC
Q 023708           94 FNNAGIS  100 (278)
Q Consensus        94 i~nag~~  100 (278)
                      |++++..
T Consensus       236 i~~~~~p  242 (377)
T 2vhw_A          236 IGAVLVP  242 (377)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9998753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.87  E-value=8.8e-05  Score=67.09  Aligned_cols=82  Identities=17%  Similarity=0.295  Sum_probs=61.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeE-EEe---c--------CCCHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY-IHC---D--------VTKEEDVESAVRLA   83 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~---D--------~~~~~~i~~~~~~~   83 (278)
                      .|+++||+||+|++|...++.+...|++|+++++++++.+.+ ++++... +..   |        ..+.++++++.+.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            578999999999999999998888999999998888776655 4455432 221   1        23456667777777


Q ss_pred             HhhcC--CccEEEECCc
Q 023708           84 VSWKG--QLDIMFNNAG   98 (278)
Q Consensus        84 ~~~~g--~id~li~nag   98 (278)
                      .+..+  ++|++|.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            77553  6999999987

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.87  E-value=6.8e-05  Score=65.74  Aligned_cols=78  Identities=26%  Similarity=0.346  Sum_probs=57.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+++++++|+|+ |++|+++++.+...|++|++++|+.++.+.+.+..... +.++..+.+++.+.+.       +.|++
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~DvV  234 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR-VELLYSNSAEIETAVA-------EADLL  234 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG-SEEEECCHHHHHHHHH-------TCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce-eEeeeCCHHHHHHHHc-------CCCEE
Confidence            467799999999 99999999999999999999999988877665443211 1122234444444332       69999


Q ss_pred             EECCccC
Q 023708           94 FNNAGIS  100 (278)
Q Consensus        94 i~nag~~  100 (278)
                      |++++..
T Consensus       235 I~~~~~~  241 (361)
T 1pjc_A          235 IGAVLVP  241 (361)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9999863

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.86  E-value=5.3e-05  Score=61.43  Aligned_cols=73  Identities=21%  Similarity=0.189  Sum_probs=61.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      .++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+..+..++..|.++.+.+++.      ...+.|.+|.+.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~   74 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDA------EVSKNDVVVILTP   74 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHH------TCCTTCEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhc------CcccCCEEEEecC
Confidence            4899996 89999999999999999999999999888877666788899999998876654      1236899987654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.85  E-value=5.7e-05  Score=65.66  Aligned_cols=76  Identities=18%  Similarity=0.340  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||+|++|..+++.+...|++|+++ +++++.+.+ ++++...  .| .+.+ +.+.+.+... ..++|++|.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lGa~~--i~-~~~~-~~~~~~~~~~-~~g~D~vid  222 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLGATP--ID-ASRE-PEDYAAEHTA-GQGFDLVYD  222 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHTSEE--EE-TTSC-HHHHHHHHHT-TSCEEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcCCCE--ec-cCCC-HHHHHHHHhc-CCCceEEEE
Confidence            57899999999999999999999999999998 666665544 4556554  55 4333 3333332221 126999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       223 ~~g  225 (343)
T 3gaz_A          223 TLG  225 (343)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            987

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.85  E-value=9.1e-05  Score=64.89  Aligned_cols=104  Identities=22%  Similarity=0.295  Sum_probs=71.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.+ ++... ..|..+.+ +.+.+.+..  .+++|++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~-~~~~~~~~-~~~~~~~~~--~~g~D~vid  237 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDR-PINYKTEP-VGTVLKQEY--PEGVDVVYE  237 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSE-EEETTTSC-HHHHHHHHC--TTCEEEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCcE-EEecCChh-HHHHHHHhc--CCCCCEEEE
Confidence            57899999999999999999999999999999998877665543 45432 23544432 333333221  136999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      ++|.            +               .++.+++.++.   .|++|.+++....
T Consensus       238 ~~g~------------~---------------~~~~~~~~l~~---~G~iv~~g~~~~~  266 (362)
T 2c0c_A          238 SVGG------------A---------------MFDLAVDALAT---KGRLIVIGFISGY  266 (362)
T ss_dssp             CSCT------------H---------------HHHHHHHHEEE---EEEEEECCCGGGT
T ss_pred             CCCH------------H---------------HHHHHHHHHhc---CCEEEEEeCCCCc
Confidence            9872            1               12344555544   5899999886543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.84  E-value=9.1e-05  Score=64.48  Aligned_cols=101  Identities=18%  Similarity=0.336  Sum_probs=69.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-C-CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-G-QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g-~id~   92 (278)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +++...+ .|..+.+ +.   +++.+.. + ++|+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~-~~~~~~~-~~---~~v~~~~~g~g~D~  239 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYV-INPFEED-VV---KEVMDITDGNGVDV  239 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEE-ECTTTSC-HH---HHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEE-ECCCCcC-HH---HHHHHHcCCCCCCE
Confidence            6889999999 9999999999888999 9999999887766554 4454322 4554433 22   2233322 2 6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      +|.++|..                          ..++.+++.++.   .|++|.+++..
T Consensus       240 vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~~  270 (348)
T 2d8a_A          240 FLEFSGAP--------------------------KALEQGLQAVTP---AGRVSLLGLYP  270 (348)
T ss_dssp             EEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             EEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEccCC
Confidence            99998731                          123445555544   57999998754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.80  E-value=1.2e-05  Score=68.65  Aligned_cols=89  Identities=18%  Similarity=0.202  Sum_probs=59.8

Q ss_pred             CCCCcE-EEEeCCCC-----------------h-hHHHHHHHHHHcCCeEEEEecchHHHH--------HHHhh------
Q 023708           14 RLTGKV-AVITGGAR-----------------G-IGAATAKLFAENGAHIVIADILDELGA--------ALAST------   60 (278)
Q Consensus        14 ~l~~k~-vlVtGas~-----------------g-iG~~ia~~L~~~g~~Vi~~~r~~~~~~--------~~~~~------   60 (278)
                      ++.||. ||||+|.+                 | .|.++|++++++|+.|+++.+......        ...+.      
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            467887 99998855                 5 999999999999999999876422100        00010      


Q ss_pred             --hCCeEEEecCCCHHHHHHHHHHH------------------------------HhhcCCccEEEECCccCCC
Q 023708           61 --IGGRYIHCDVTKEEDVESAVRLA------------------------------VSWKGQLDIMFNNAGISGS  102 (278)
Q Consensus        61 --~~~~~~~~D~~~~~~i~~~~~~~------------------------------~~~~g~id~li~nag~~~~  102 (278)
                        .++..+..|+.+.+++.+.+.+.                              .+.+++.|++|.+|++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence              11224556666666666665443                              2345789999999998744

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.77  E-value=0.00012  Score=63.78  Aligned_cols=78  Identities=15%  Similarity=0.250  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.+ ++...+ .|..+  ++.+.+.+.  ..+++|+++.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v-i~~~~--~~~~~~~~~--~~~g~Dvv~d  223 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGADIV-LNHKE--SLLNQFKTQ--GIELVDYVFC  223 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCSEE-ECTTS--CHHHHHHHH--TCCCEEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEE-EECCc--cHHHHHHHh--CCCCccEEEE
Confidence            58999999999999999999998999999999998877665554 454322 34332  222333332  2236999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       224 ~~g~  227 (346)
T 3fbg_A          224 TFNT  227 (346)
T ss_dssp             SSCH
T ss_pred             CCCc
Confidence            9873

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.74  E-value=5.7e-05  Score=64.40  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+|++|++|..+++.+...|++|+++++++++.+.+. +++...+ .|..+.+++   .+.+    +++|++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~-~~~~~~~~~---~~~~----~~~d~vid  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEA-ATYAEVPER---AKAW----GGLDLVLE  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEE-EEGGGHHHH---HHHT----TSEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEE-EECCcchhH---HHHh----cCceEEEE
Confidence            4789999999999999999999999999999999877665553 3454322 354441222   2222    57999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                       +|.
T Consensus       196 -~g~  198 (302)
T 1iz0_A          196 -VRG  198 (302)
T ss_dssp             -CSC
T ss_pred             -CCH
Confidence             873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.71  E-value=4.7e-05  Score=64.05  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=55.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCC-eEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.++. .....++.+   +.       .  ...|
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~-------~--~~~D  183 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LE-------G--QSFD  183 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GT-------T--CCCS
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hc-------c--cCCC
Confidence            578999999998 6999999999999996 899999999988888777552 111122222   11       1  3689


Q ss_pred             EEEECCcc
Q 023708           92 IMFNNAGI   99 (278)
Q Consensus        92 ~li~nag~   99 (278)
                      +|||+...
T Consensus       184 ivInaTp~  191 (272)
T 3pwz_A          184 IVVNATSA  191 (272)
T ss_dssp             EEEECSSG
T ss_pred             EEEECCCC
Confidence            99998754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.62  E-value=4.4e-05  Score=57.66  Aligned_cols=71  Identities=14%  Similarity=0.236  Sum_probs=55.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.+.+.+..+....  +..+   +.+.++       ..|++|++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~---~~~~~~-------~~Divi~a   87 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIND---IDSLIK-------NNDVIITA   87 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSC---HHHHHH-------TCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eecC---HHHHhc-------CCCEEEEe
Confidence            789999996 9999999999999999998999999888887777664432  2233   233333       68999998


Q ss_pred             CccC
Q 023708           97 AGIS  100 (278)
Q Consensus        97 ag~~  100 (278)
                      .+..
T Consensus        88 t~~~   91 (144)
T 3oj0_A           88 TSSK   91 (144)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            8753

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.61  E-value=0.00017  Score=62.59  Aligned_cols=100  Identities=21%  Similarity=0.246  Sum_probs=67.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ + .. ...|..+.+ +.+.+.++.  .+++|++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~-~v~~~~~~~-~~~~~~~~~--~~g~D~vi  236 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-AD-RLVNPLEED-LLEVVRRVT--GSGVEVLL  236 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CS-EEECTTTSC-HHHHHHHHH--SSCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HH-hccCcCccC-HHHHHHHhc--CCCCCEEE
Confidence            6789999999 9999999998888999 99999998776654433 2 22 224554432 333333332  23699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      .++|..                          ..++.+++.++.   .|++|.++..
T Consensus       237 d~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~  264 (343)
T 2dq4_A          237 EFSGNE--------------------------AAIHQGLMALIP---GGEARILGIP  264 (343)
T ss_dssp             ECSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCC
T ss_pred             ECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEecC
Confidence            998730                          123445555544   5799998764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.00072  Score=58.81  Aligned_cols=81  Identities=16%  Similarity=0.147  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHh-hcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVS-WKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~-~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|++|+++++++++.+.+. +++... ..|..+ .+..+++.+...+ .-+++|++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~v  244 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVT  244 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEE
Confidence            5789999997 89999999888889999999998887766554 445432 234443 3322333222110 01369999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       245 id~~g~  250 (352)
T 1e3j_A          245 IDCSGN  250 (352)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999873

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.57  E-value=0.001  Score=58.01  Aligned_cols=79  Identities=19%  Similarity=0.144  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhc--CCc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWK--GQL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~--g~i   90 (278)
                      .|+++||+|+ |++|...++.+...|++ |+++++++++.+.+.+. .  +..+..|-.+.+++.+.+   .+..  .++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v---~~~t~g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKI---VESFGGIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHH---HHHTSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHH---HHHhCCCCC
Confidence            4789999998 99999999888889997 88888888777665544 3  222334444445444433   3333  269


Q ss_pred             cEEEECCcc
Q 023708           91 DIMFNNAGI   99 (278)
Q Consensus        91 d~li~nag~   99 (278)
                      |++|.++|.
T Consensus       254 Dvvid~~g~  262 (363)
T 3m6i_A          254 AVALECTGV  262 (363)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.52  E-value=0.00035  Score=62.10  Aligned_cols=73  Identities=19%  Similarity=0.390  Sum_probs=56.5

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.+++++|.|+ |++|+.+++.|...|+ +|++++|+.++..++.+.++...  .+.   +++.+.+.       ..|+
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~--~~~---~~l~~~l~-------~aDv  230 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--VRF---DELVDHLA-------RSDV  230 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--CCG---GGHHHHHH-------TCSE
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce--ecH---HhHHHHhc-------CCCE
Confidence            478999999998 9999999999999998 89999999888767766666442  222   23333332       6899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      ||.+.+.
T Consensus       231 Vi~at~~  237 (404)
T 1gpj_A          231 VVSATAA  237 (404)
T ss_dssp             EEECCSS
T ss_pred             EEEccCC
Confidence            9999764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.51  E-value=0.00031  Score=61.75  Aligned_cols=76  Identities=21%  Similarity=0.295  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+||+|++|..+++.+...|++|+++++ +++.+.+ ++++... ..|..+.+-.+    ++.+ .+++|++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~lGa~~-v~~~~~~~~~~----~~~~-~~g~D~vid  254 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKLGADD-VIDYKSGSVEE----QLKS-LKPFDFILD  254 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHTTCSE-EEETTSSCHHH----HHHT-SCCBSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHcCCCE-EEECCchHHHH----HHhh-cCCCCEEEE
Confidence            5789999999999999999988889999998875 3444433 4555432 23555433222    2222 257999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       255 ~~g~  258 (375)
T 2vn8_A          255 NVGG  258 (375)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9983

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.47  E-value=0.011  Score=49.64  Aligned_cols=41  Identities=20%  Similarity=0.105  Sum_probs=34.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      +++.|.|+ |.+|..+|..|++.|++|++.+++++..+...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            56777775 789999999999999999999999877665544

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.41  E-value=0.00026  Score=57.93  Aligned_cols=72  Identities=18%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.  .++.++.+|.++.+.++++      ...+.|.+|.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKA------NVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHT------TCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhc------CcchhcEEEEc
Confidence            456889997 8999999999999999 999999988777665  4678899999998866654      11368998876


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .+
T Consensus        79 ~~   80 (234)
T 2aef_A           79 LE   80 (234)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.40  E-value=0.0014  Score=54.81  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=52.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. +.++...  ++.+.              ...|+|||+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~l--------------~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPPK--------------SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCCS--------------SCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHHh--------------ccCCEEEEc
Confidence            899999997 99999999999999999999999988888877 6664433  32221              168999998


Q ss_pred             CccC
Q 023708           97 AGIS  100 (278)
Q Consensus        97 ag~~  100 (278)
                      ....
T Consensus       180 Tp~G  183 (269)
T 3phh_A          180 TSAS  183 (269)
T ss_dssp             CTTC
T ss_pred             ccCC
Confidence            7653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.40  E-value=0.0012  Score=56.28  Aligned_cols=139  Identities=14%  Similarity=0.054  Sum_probs=81.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEec--chHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADI--LDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r--~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +++||||+|.+|..++..|+..|.  .+++.++  ++++.+....++        .+.+ ..+  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v-~~~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRV-RQG--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEE-EEC--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEE-EeC--CH-----------HH
Confidence            589999999999999999998885  5888888  665443221111        0111 111  11           12


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh--------cCCC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--------MGGL  158 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~  158 (278)
                      +...|++||.||....+    ..+.+   +.+..|+.....+++.+...    ..++.++++|-....        .+.|
T Consensus        68 ~~~aDvVi~~ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i~~~----~p~~~viv~SNPv~~~~~~~~~~~~~p  136 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP----GQTRI---DLAGDNAPIMEDIQSSLDEH----NDDYISLTTSNPVDLLNRHLYEAGDRS  136 (303)
T ss_dssp             GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHTT----CSCCEEEECCSSHHHHHHHHHHHSSSC
T ss_pred             hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH----CCCcEEEEeCChHHHHHHHHHHHcCCC
Confidence            34799999999964222    12222   45788888777766665543    324566665544432        1244


Q ss_pred             CCchhhh-hHHHHHHHHHHHHHHHC
Q 023708          159 ASHAYSL-SKEAIIGLARSTACELG  182 (278)
Q Consensus       159 ~~~~Y~~-sK~a~~~l~~~l~~e~~  182 (278)
                      .....|. +-.=...+-..++..+.
T Consensus       137 ~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          137 REQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHHeeecccchhHHHHHHHHHHHhC
Confidence            4445555 33334555666666663

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.37  E-value=0.00086  Score=58.61  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+.+ ++++...+ .| .+.+++.+.+.++... .++|++|.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v-i~-~~~~~~~~~v~~~~~g-~g~D~vid  263 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADHG-IN-RLEEDWVERVYALTGD-RGADHILE  263 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEE-EE-TTTSCHHHHHHHHHTT-CCEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCEE-Ec-CCcccHHHHHHHHhCC-CCceEEEE
Confidence            578999999 89999999998888999999999988777665 44454322 34 4433333333333221 26999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       264 ~~g  266 (363)
T 3uog_A          264 IAG  266 (363)
T ss_dssp             ETT
T ss_pred             CCC
Confidence            998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00017  Score=62.17  Aligned_cols=75  Identities=15%  Similarity=0.202  Sum_probs=49.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++||+||+|++|..+++.+...|++|+++++++++.+.+. +++...+ .|..+.+  .+.++++.  .+++|++|.++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~-i~~~~~~--~~~~~~~~--~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEV-LAREDVM--AERIRPLD--KQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEE-EECC-----------CC--SCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEE-EecCCcH--HHHHHHhc--CCcccEEEECCc
Confidence            7999999999999999988889999999998876665553 3454322 3544432  22222221  236999999987


Q ss_pred             c
Q 023708           99 I   99 (278)
Q Consensus        99 ~   99 (278)
                      .
T Consensus       226 ~  226 (328)
T 1xa0_A          226 G  226 (328)
T ss_dssp             T
T ss_pred             H
Confidence            3

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.35  E-value=0.0023  Score=55.67  Aligned_cols=78  Identities=17%  Similarity=0.290  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++... ..|..  +.++..+.+.+...  +++|+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~-vi~~~~~~~~~~~~~i~~~~~--~g~D~  245 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADL-VLQISKESPQEIARKVEGQLG--CKPEV  245 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSE-EEECSSCCHHHHHHHHHHHHT--SCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCE-EEcCcccccchHHHHHHHHhC--CCCCE
Confidence            4789999996 8999999888888899 8999998887765554 455432 23444  22333222222222  47999


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.++|
T Consensus       246 vid~~g  251 (356)
T 1pl8_A          246 TIECTG  251 (356)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999987

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.35  E-value=0.00055  Score=57.72  Aligned_cols=69  Identities=16%  Similarity=0.237  Sum_probs=52.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++|.++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+.+.  .+  +   .+++       .+ . ..|+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~--~~--~---~~~l-------~~-l-~~Di  181 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK--VI--S---YDEL-------SN-L-KGDV  181 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE--EE--E---HHHH-------TT-C-CCSE
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC--cc--c---HHHH-------Hh-c-cCCE
Confidence            578999999997 6999999999999998 89999999988877765432  11  1   1222       12 2 6899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      |||+...
T Consensus       182 vInaTp~  188 (282)
T 3fbt_A          182 IINCTPK  188 (282)
T ss_dssp             EEECSST
T ss_pred             EEECCcc
Confidence            9998854

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.33  E-value=0.00078  Score=58.42  Aligned_cols=151  Identities=19%  Similarity=0.121  Sum_probs=81.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      -|+++++.|+|++|.+|..++..++.+|.  +|++.+.++++.+....++. ..+...++.-..+..+.+       ...
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al-------~dA   77 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEAL-------TDA   77 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHH-------TTE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHh-------CCC
Confidence            45678899999999999999999999984  79999998776554322211 001001111111222222       369


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcE-EEEecCchhh--------cCCCCCc
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGS-IICTSSSAAI--------MGGLASH  161 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~-iv~vsS~~~~--------~~~~~~~  161 (278)
                      |++|..||....  +  ..+   =.+.++.|+.-...+.+    .+.+...++. ++++|-....        .++|...
T Consensus        78 DvVvitaG~p~k--p--G~~---R~dLl~~N~~I~~~i~~----~i~~~~p~a~~vlvvsNPvd~~t~i~~k~sg~p~~r  146 (343)
T 3fi9_A           78 KYIVSSGGAPRK--E--GMT---REDLLKGNAEIAAQLGK----DIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQ  146 (343)
T ss_dssp             EEEEECCC-----------C---HHHHHHHHHHHHHHHHH----HHHHHCTTCCEEEECSSSHHHHHHHHHHHHTCCGGG
T ss_pred             CEEEEccCCCCC--C--CCC---HHHHHHHHHHHHHHHHH----HHHHhccCcEEEEEecCchHHHHHHHHHHcCCCcce
Confidence            999999986321  1  122   23456666655544444    4444333564 6777654421        1233222


Q ss_pred             hhhhhHHHHHHHHHHHHHHHC
Q 023708          162 AYSLSKEAIIGLARSTACELG  182 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~  182 (278)
                      ..+.+-.=-..+-..++..+.
T Consensus       147 v~g~t~LDs~R~~~~la~~l~  167 (343)
T 3fi9_A          147 VTTLAGLDSTRLQSELAKHFG  167 (343)
T ss_dssp             EEEECCHHHHHHHHHHHHHHT
T ss_pred             EEEecCcHHHHHHHHHHHHhC
Confidence            233332222345556666663

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.0016  Score=57.31  Aligned_cols=78  Identities=18%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhc-C-Cc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWK-G-QL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~-g-~i   90 (278)
                      .|+++||+| +|++|...++.+...| ++|+++++++++.+.+. +++...+ .|..  +.+++.   +++.+.. + ++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~~~~~~~---~~v~~~~~g~g~  268 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLT-LNRRETSVEERR---KAIMDITHGRGA  268 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEE-EETTTSCHHHHH---HHHHHHTTTSCE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcEE-EeccccCcchHH---HHHHHHhCCCCC
Confidence            478999999 8999999998888899 59999999887766554 4554322 3433  133333   3333333 2 69


Q ss_pred             cEEEECCcc
Q 023708           91 DIMFNNAGI   99 (278)
Q Consensus        91 d~li~nag~   99 (278)
                      |++|.++|.
T Consensus       269 Dvvid~~g~  277 (380)
T 1vj0_A          269 DFILEATGD  277 (380)
T ss_dssp             EEEEECSSC
T ss_pred             cEEEECCCC
Confidence            999999874

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.33  E-value=0.00012  Score=58.79  Aligned_cols=71  Identities=23%  Similarity=0.222  Sum_probs=48.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEE-ecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIH-CDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +++|+||+|.+|.++++.|++.|++|++.+|+++..+.+.+..+. ++. .|+. .+++.+.++       ..|++|++.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-------~~D~Vi~~~   72 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAE-------ACDIAVLTI   72 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHH-------HCSEEEECS
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHh-------cCCEEEEeC
Confidence            588999999999999999999999999999988777666543220 000 1121 122333333       489999886


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      .
T Consensus        73 ~   73 (212)
T 1jay_A           73 P   73 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.32  E-value=0.00042  Score=58.50  Aligned_cols=74  Identities=15%  Similarity=0.227  Sum_probs=54.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCC--eEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGG--RYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+++.+.++.  .....++.+   +.          ..
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l~----------~~  187 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---LK----------QS  187 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---CC----------SC
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---hc----------CC
Confidence            3578999999998 7999999999999996 899999999888887766542  111122211   10          36


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|+|||+....
T Consensus       188 aDiIInaTp~g  198 (281)
T 3o8q_A          188 YDVIINSTSAS  198 (281)
T ss_dssp             EEEEEECSCCC
T ss_pred             CCEEEEcCcCC
Confidence            89999987643

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.30  E-value=6.3e-05  Score=63.39  Aligned_cols=71  Identities=15%  Similarity=0.109  Sum_probs=50.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.  ....     ..+++.+.       ....|+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--~~~~-----~~~~~~~~-------~~~aDi  178 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--INKI-----NLSHAESH-------LDEFDI  178 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--CEEE-----CHHHHHHT-------GGGCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--cccc-----cHhhHHHH-------hcCCCE
Confidence            567899999997 7999999999999998 899999998765544322  1111     22233222       235899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      |||+...
T Consensus       179 VInaTp~  185 (277)
T 3don_A          179 IINTTPA  185 (277)
T ss_dssp             EEECCC-
T ss_pred             EEECccC
Confidence            9988754

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.29  E-value=0.0017  Score=56.19  Aligned_cols=76  Identities=17%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++++||+|+ |++|...++.+...|++|+++++++++.+.+ ++++...+ .|..+.+..+.+.    +..+++|.+|.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~-i~~~~~~~~~~~~----~~~g~~d~vid  238 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVA-VNARDTDPAAWLQ----KEIGGAHGVLV  238 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEE-EETTTSCHHHHHH----HHHSSEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCEE-EeCCCcCHHHHHH----HhCCCCCEEEE
Confidence            5789999997 8999999988888999999999988777655 44454322 3555444333322    23468999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      ++|
T Consensus       239 ~~g  241 (340)
T 3s2e_A          239 TAV  241 (340)
T ss_dssp             SSC
T ss_pred             eCC
Confidence            986

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.28  E-value=0.0013  Score=57.62  Aligned_cols=85  Identities=15%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC-----------CHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT-----------KEEDVESAVRL   82 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-----------~~~~i~~~~~~   82 (278)
                      .+.+++++|+|+ |.+|..+++.+...|++|++.+|+.++.+.+.+ .+..++..|+.           ..+....-.+.
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~  258 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQA  258 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHH
Confidence            357889999999 799999999999999999999999887766654 45555443320           01112222334


Q ss_pred             HHhhcCCccEEEECCccC
Q 023708           83 AVSWKGQLDIMFNNAGIS  100 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~  100 (278)
                      +.+.....|++|.++.+.
T Consensus       259 l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          259 LEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHTTCSEEEECCCCT
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            444446899999887543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.00086  Score=58.81  Aligned_cols=79  Identities=16%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...+ .|..+ .+++.+.+.++..  +++|++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~~~~~~~~~~~~~~--~g~D~v  266 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDF-VNPNDHSEPISQVLSKMTN--GGVDFS  266 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEE-ECGGGCSSCHHHHHHHHHT--SCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCceE-EeccccchhHHHHHHHHhC--CCCCEE
Confidence            4789999996 9999999988888999 7999988877766554 4454322 34443 1234444443332  479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       267 id~~g~  272 (374)
T 1cdo_A          267 LECVGN  272 (374)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.0013  Score=57.44  Aligned_cols=77  Identities=18%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC-CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG-QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~l   93 (278)
                      .+.++||+|+ |++|...++.+... |++|+++++++++.+.+. +++...+ .|..+.  +.+.+.++.  .+ ++|++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~--~~~~v~~~~--~g~g~Dvv  258 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHV-VDARRD--PVKQVMELT--RGRGVNVA  258 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEE-EETTSC--HHHHHHHHT--TTCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEE-Eeccch--HHHHHHHHh--CCCCCcEE
Confidence            5789999999 89999998888788 999999999887766554 4554322 355443  333333322  13 69999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       259 id~~G~  264 (359)
T 1h2b_A          259 MDFVGS  264 (359)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.23  E-value=0.00071  Score=59.03  Aligned_cols=75  Identities=15%  Similarity=0.223  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||+|+ |++|...++.+...|++|+++++++++.+.+.++++...+ .|..+.+.+.       +..+++|++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~-------~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMS-------ELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHH-------HSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHH-------HhcCCCCEEEE
Confidence            6789999995 9999999988888899999999988777666645554322 3444543322       22347999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.21  E-value=0.00099  Score=59.12  Aligned_cols=84  Identities=17%  Similarity=0.258  Sum_probs=54.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC-------------CHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT-------------KEEDVESAV   80 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-------------~~~~i~~~~   80 (278)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++.++.+.+ +..+..++..|..             +.+..+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  246 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEM  246 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHH
Confidence            467899999996 8999999999999999999999988776665 3445554433321             111111111


Q ss_pred             HHHHhhcCCccEEEECCcc
Q 023708           81 RLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~   99 (278)
                      +.+.+.....|++|.+++.
T Consensus       247 ~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          247 ELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHhCCCCEEEECCcc
Confidence            1122222358999998765

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.19  E-value=0.0011  Score=56.80  Aligned_cols=143  Identities=15%  Similarity=0.156  Sum_probs=81.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhhCCeEEEecCCC---HHHHHHHHHHHHhhcCCccEE
Q 023708           19 VAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTIGGRYIHCDVTK---EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++.|+||+|.+|..++..|+..|  ..|++.++++..  ....++.-.....++..   ..+.++.+       ...|++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~--~~a~dL~~~~~~~~l~~~~~t~d~~~a~-------~~aDvV   72 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIETRATVKGYLGPEQLPDCL-------KGCDVV   72 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSSSCEEEEEESGGGHHHHH-------TTCSEE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH--HHHHHHhccCcCceEEEecCCCCHHHHh-------CCCCEE
Confidence            58999999999999999999988  689999987621  12112110000112221   12333333       379999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------------CCCCCc
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------------GGLASH  161 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~~~  161 (278)
                      |+.+|.....+    .+..   +.+..|+.....+.+.+.+.    ..++.++++|-.....            .+|...
T Consensus        73 vi~ag~~~~~g----~~r~---dl~~~n~~i~~~i~~~i~~~----~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~r  141 (314)
T 1mld_A           73 VIPAGVPRKPG----MTRD---DLFNTNATIVATLTAACAQH----CPDAMICIISNPVNSTIPITAEVFKKHGVYNPNK  141 (314)
T ss_dssp             EECCSCCCCTT----CCGG---GGHHHHHHHHHHHHHHHHHH----CTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTS
T ss_pred             EECCCcCCCCC----CcHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEECCCcchhHHHHHHHHHHcCCCCcce
Confidence            99999753221    1111   23566666555555555443    2367888876654321            244444


Q ss_pred             hhhhhHHHHHHHHHHHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACEL  181 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~  181 (278)
                      ..+.+-.--..+-..++..+
T Consensus       142 vig~t~Ld~~r~~~~la~~l  161 (314)
T 1mld_A          142 IFGVTTLDIVRANAFVAELK  161 (314)
T ss_dssp             EEECCHHHHHHHHHHHHHHT
T ss_pred             EEEeecccHHHHHHHHHHHh
Confidence            55554433444555566555

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.17  E-value=0.001  Score=58.34  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +++...+ .|..+ .+++.+.+.++..  +++|++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~~~~~~~~~~~~~~--~g~D~v  265 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATEC-VNPQDYKKPIQEVLTEMSN--GGVDFS  265 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEE-ECGGGCSSCHHHHHHHHTT--SCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCceE-ecccccchhHHHHHHHHhC--CCCcEE
Confidence            4789999995 9999999988888999 7999988877766553 4454322 34432 1223333333322  479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       266 id~~g~  271 (374)
T 2jhf_A          266 FEVIGR  271 (374)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0013  Score=57.64  Aligned_cols=74  Identities=20%  Similarity=0.326  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+.+ ++... ..|..+.+.+++    +.   +++|++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~~-vi~~~~~~~~~~----~~---~g~Dvvid  263 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADE-VVNSRNADEMAA----HL---KSFDFILN  263 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSE-EEETTCHHHHHT----TT---TCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcE-EeccccHHHHHH----hh---cCCCEEEE
Confidence            4789999998 899999998888899999999988777665543 45432 245555543322    21   57999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       264 ~~g~  267 (369)
T 1uuf_A          264 TVAA  267 (369)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.14  E-value=0.0014  Score=57.94  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=56.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecC----------------CCHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV----------------TKEEDVE   77 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~----------------~~~~~i~   77 (278)
                      .+.+.+++|+|+ |.+|..+++.+...|++|++.+++.++.+.+.+ .+..++..++                +++. ..
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~-~~  263 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEY-QV  263 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHH-HH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhh-hh
Confidence            356789999999 799999999999999999999999887766654 4555544332                1110 01


Q ss_pred             HHHHHHHhhcCCccEEEECCccC
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGIS  100 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~  100 (278)
                      ...+.+.+.....|++|.++.+.
T Consensus       264 ~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          264 KQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhHhHHHHHhcCCCEEEECCcCC
Confidence            11122222223799999987654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.13  E-value=0.00082  Score=58.58  Aligned_cols=100  Identities=18%  Similarity=0.256  Sum_probs=67.3

Q ss_pred             CCCcEEEEeCCCChhHHHH-HHHH-HHcCCe-EEEEecchH---HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAAT-AKLF-AENGAH-IVIADILDE---LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~i-a~~L-~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++++++||+|+ |++|... ++.+ ...|++ |++++++++   +.+.+ ++++...+  |..+.+ +.+ +.++   .+
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa~~v--~~~~~~-~~~-i~~~---~g  241 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDATYV--DSRQTP-VED-VPDV---YE  241 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTCEEE--ETTTSC-GGG-HHHH---SC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCCccc--CCCccC-HHH-HHHh---CC
Confidence            34489999999 9999988 7666 567997 999998876   65554 45666555  655433 333 4333   24


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ++|++|.++|..           .               .++.++..++.   .|++|.++...
T Consensus       242 g~Dvvid~~g~~-----------~---------------~~~~~~~~l~~---~G~iv~~g~~~  276 (357)
T 2b5w_A          242 QMDFIYEATGFP-----------K---------------HAIQSVQALAP---NGVGALLGVPS  276 (357)
T ss_dssp             CEEEEEECSCCH-----------H---------------HHHHHHHHEEE---EEEEEECCCCC
T ss_pred             CCCEEEECCCCh-----------H---------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence            799999998731           1               23344555544   58999987654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.12  E-value=0.0015  Score=57.36  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...+ .|..+ .+++.+.+.++..  +++|++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v-i~~~~~~~~~~~~v~~~~~--~g~Dvv  269 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATDC-LNPRELDKPVQDVITELTA--GGVDYS  269 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEE-ECGGGCSSCHHHHHHHHHT--SCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCcEE-EccccccchHHHHHHHHhC--CCccEE
Confidence            4789999996 9999999888888999 799998887776655 34554322 34432 1223333333322  479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       270 id~~G~  275 (376)
T 1e3i_A          270 LDCAGT  275 (376)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.11  E-value=0.001  Score=55.01  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=32.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILD   51 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~   51 (278)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++++.
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            366789999996 7999999999999997 788888765

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.11  E-value=0.00062  Score=59.43  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCH-HHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE-EDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~id~li   94 (278)
                      .++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+ ++...+ .|..+. +.    .+++.   +++|++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v-~~~~~~~~~----~~~~~---~~~D~vi  248 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHY-IATLEEGDW----GEKYF---DTFDLIV  248 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEE-EEGGGTSCH----HHHSC---SCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCCEE-EcCcCchHH----HHHhh---cCCCEEE
Confidence            5789999999 999999998888899999999988776655543 453322 343332 21    22221   5799999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .++|.
T Consensus       249 d~~g~  253 (360)
T 1piw_A          249 VCASS  253 (360)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.10  E-value=0.0016  Score=57.36  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=55.3

Q ss_pred             CCcEEEEeC-CCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITG-GARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtG-as~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.++||.| |+|++|...++.+...|++|+++++++++.+.+.+ ++...+ .|..+.+-.+++.+....  .++|++|
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~-~~~~~~~~~~~v~~~t~~--~g~d~v~  245 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QGAVHV-CNAASPTFMQDLTEALVS--TGATIAF  245 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TTCSCE-EETTSTTHHHHHHHHHHH--HCCCEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCcEE-EeCCChHHHHHHHHHhcC--CCceEEE
Confidence            577899997 89999999998888889999999998877765543 453321 344443323333222221  2699999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .+.|.
T Consensus       246 d~~g~  250 (379)
T 3iup_A          246 DATGG  250 (379)
T ss_dssp             ESCEE
T ss_pred             ECCCc
Confidence            99984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.08  E-value=0.0012  Score=57.62  Aligned_cols=77  Identities=16%  Similarity=0.303  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-CCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAE-NGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-GQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id~l   93 (278)
                      .++++||+||+|++|...++.+.. .|++|+++++++++.+.+. +++...+ .|..+  ++   .+++.+.. +++|++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~v-i~~~~--~~---~~~v~~~~~~g~Dvv  243 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHV-IDHSK--PL---AAEVAALGLGAPAFV  243 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEE-ECTTS--CH---HHHHHTTCSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEE-EeCCC--CH---HHHHHHhcCCCceEE
Confidence            578999999999999987766555 5899999999887766554 4554432 34433  22   23333332 379999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      +.++|.
T Consensus       244 id~~g~  249 (363)
T 4dvj_A          244 FSTTHT  249 (363)
T ss_dssp             EECSCH
T ss_pred             EECCCc
Confidence            999873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.06  E-value=0.0028  Score=56.23  Aligned_cols=77  Identities=23%  Similarity=0.436  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-C-CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-G-QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g-~id~   92 (278)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...+ .|..+.+-.    +++.+.. + ++|+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~v-i~~~~~~~~----~~i~~~t~g~g~D~  285 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHV-IDPTKENFV----EAVLDYTNGLGAKL  285 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSEE-ECTTTSCHH----HHHHHHTTTCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCEE-EcCCCCCHH----HHHHHHhCCCCCCE
Confidence            5789999998 8999998888888999 899988888776544 44554322 354444322    3333332 2 5999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.++|.
T Consensus       286 vid~~g~  292 (404)
T 3ip1_A          286 FLEATGV  292 (404)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.06  E-value=0.0015  Score=57.20  Aligned_cols=79  Identities=22%  Similarity=0.253  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...+ .|..+ .+++.+.+.++..  +++|++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~~~~~~~~v~~~~~--~g~D~v  264 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATEC-INPQDFSKPIQEVLIEMTD--GGVDYS  264 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEE-ECGGGCSSCHHHHHHHHTT--SCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceE-eccccccccHHHHHHHHhC--CCCCEE
Confidence            4789999996 9999999988888899 7999988877665554 4454322 34432 1223333333322  479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       265 id~~g~  270 (373)
T 2fzw_A          265 FECIGN  270 (373)
T ss_dssp             EECSCC
T ss_pred             EECCCc
Confidence            999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.05  E-value=0.0047  Score=53.41  Aligned_cols=77  Identities=16%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc--CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN--GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...  |++|+++++++++.+.+. +++...+ .|..+.   ...++++.+ -.++|++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v-i~~~~~---~~~~~~~~~-g~g~D~v  242 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYV-SEMKDA---ESLINKLTD-GLGASIA  242 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEE-ECHHHH---HHHHHHHHT-TCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEE-eccccc---hHHHHHhhc-CCCccEE
Confidence            6889999999 89999998888888  999999998887766554 3453322 232220   122333332 1269999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       243 id~~g~  248 (344)
T 2h6e_A          243 IDLVGT  248 (344)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999873

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.04  E-value=0.0014  Score=56.15  Aligned_cols=73  Identities=19%  Similarity=0.362  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+||+|++|...++.+...|++|+++++.++  .+..++++... ..|..+.+.+.+.       ..++|+++.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~~~~lGa~~-~i~~~~~~~~~~~-------~~g~D~v~d  221 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAFLKALGAEQ-CINYHEEDFLLAI-------STPVDAVID  221 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHHHHHHTCSE-EEETTTSCHHHHC-------CSCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHHHHHcCCCE-EEeCCCcchhhhh-------ccCCCEEEE
Confidence            5789999999999999999998889999998876543  34445556442 2344443322221       247999999


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       222 ~~g  224 (321)
T 3tqh_A          222 LVG  224 (321)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.01  E-value=0.0022  Score=57.10  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=58.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ..++|.|. |.+|..+++.|.+.|+.|++++++++..+.+.+ .+..++.+|.++.+.++++      ...+.|+||.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~a------gi~~A~~viv~~   76 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESA------GAAKAEVLINAI   76 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHT------TTTTCSEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhc------CCCccCEEEECC
Confidence            45889997 789999999999999999999999988877754 4677888999998866654      112578887765


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      +
T Consensus        77 ~   77 (413)
T 3l9w_A           77 D   77 (413)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.99  E-value=0.002  Score=56.21  Aligned_cols=82  Identities=11%  Similarity=0.137  Sum_probs=50.1

Q ss_pred             CC-cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH---HHHHHhhhCCeEEEecCCCH--HHHHHHHHHHHh-hcC
Q 023708           16 TG-KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL---GAALASTIGGRYIHCDVTKE--EDVESAVRLAVS-WKG   88 (278)
Q Consensus        16 ~~-k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~---~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~-~~g   88 (278)
                      .| .++||+||+|++|...++.+...|++|++++++.+.   ..+..++++...+ .|..+.  +++.+.+.++.. ..+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-ITEDQNNSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-EecCccchHHHHHHHHHHhhccCC
Confidence            46 899999999999999888877889999888765432   1223345554322 222110  122222222210 123


Q ss_pred             CccEEEECCc
Q 023708           89 QLDIMFNNAG   98 (278)
Q Consensus        89 ~id~li~nag   98 (278)
                      ++|++|.++|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999987

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.99  E-value=0.0084  Score=51.54  Aligned_cols=142  Identities=17%  Similarity=0.197  Sum_probs=76.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC--------CeEEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG--------GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      +.+++++.|+|+ |.+|.+++..|+..|.  .+++.+++++..+....++.        +... .|  +           
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~-----------   70 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--E-----------   70 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C-----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--c-----------
Confidence            345678999997 9999999999999987  89999998776664332221        1111 11  1           


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------  155 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------  155 (278)
                      .+.+...|++|..||....++       ++=.+.++.|+.-    ++.+.+.+.+...++.++++|-.....        
T Consensus        71 ~~a~~~aDiVvi~ag~~~kpG-------~tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~~  139 (326)
T 3vku_A           71 YSDAKDADLVVITAGAPQKPG-------ETRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLS  139 (326)
T ss_dssp             GGGGTTCSEEEECCCCC-----------------------C----HHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEEECCCCCCCCC-------chHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCchHHHHHHHHHhc
Confidence            122347999999999642211       1223445666544    444455555434467888877654321        


Q ss_pred             CCCCCchhhh-hHHHHHHHHHHHHHHH
Q 023708          156 GGLASHAYSL-SKEAIIGLARSTACEL  181 (278)
Q Consensus       156 ~~~~~~~Y~~-sK~a~~~l~~~l~~e~  181 (278)
                      +.|.....+. +-.=...+-..++..+
T Consensus       140 g~p~~rviG~gt~LD~~R~~~~la~~l  166 (326)
T 3vku_A          140 GFPKNRVVGSGTSLDTARFRQSIAKMV  166 (326)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCCHHHeeeecccCcHHHHHHHHHHHh
Confidence            2333333343 3332344555566665

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.99  E-value=0.00071  Score=56.16  Aligned_cols=70  Identities=17%  Similarity=0.308  Sum_probs=51.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.++++  ..  +.   +++.+.++       ..|+
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~--~~--~~---~~~~~~~~-------~aDi  169 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK--IF--SL---DQLDEVVK-------KAKS  169 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE--EE--EG---GGHHHHHH-------TCSE
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc--cC--CH---HHHHhhhc-------CCCE
Confidence            4577 8999997 8999999999999998 89999999887766654432  11  11   22333332       6899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      ||++...
T Consensus       170 VInatp~  176 (253)
T 3u62_A          170 LFNTTSV  176 (253)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9998754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.98  E-value=0.0016  Score=57.00  Aligned_cols=102  Identities=20%  Similarity=0.323  Sum_probs=67.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh---h-cCCc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS---W-KGQL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~---~-~g~i   90 (278)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+. .++++... ..|.++.+-    .+.+.+   . .+++
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~-vi~~~~~~~----~~~i~~~~~~~~gg~  254 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEVGATA-TVDPSAGDV----VEAIAGPVGLVPGGV  254 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHHTCSE-EECTTSSCH----HHHHHSTTSSSTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCCCE-EECCCCcCH----HHHHHhhhhccCCCC
Confidence            4789999998 8999998888888999 78888888776654 44455432 245554432    223332   2 2479


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      |++|.++|..                          ..++.++..++.   .|+++.++....
T Consensus       255 Dvvid~~G~~--------------------------~~~~~~~~~l~~---~G~vv~~G~~~~  288 (370)
T 4ej6_A          255 DVVIECAGVA--------------------------ETVKQSTRLAKA---GGTVVILGVLPQ  288 (370)
T ss_dssp             EEEEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECSCCCT
T ss_pred             CEEEECCCCH--------------------------HHHHHHHHHhcc---CCEEEEEeccCC
Confidence            9999998731                          123445555544   689999876543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.98  E-value=0.0016  Score=57.26  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... ..|..+ .+++.+.+.++.  .+++|++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-vi~~~~~~~~~~~~i~~~~--~gg~D~v  267 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFGVNE-FVNPKDHDKPIQEVIVDLT--DGGVDYS  267 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTTCCE-EECGGGCSSCHHHHHHHHT--TSCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCcE-EEccccCchhHHHHHHHhc--CCCCCEE
Confidence            4789999998 9999999888888899 799999888777644 4455432 234432 223333333332  2479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       268 id~~g~  273 (378)
T 3uko_A          268 FECIGN  273 (378)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999873

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.97  E-value=0.0005  Score=57.79  Aligned_cols=72  Identities=15%  Similarity=0.278  Sum_probs=53.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++++++|.|+ |++|++++..|.+.|++|.+.+|+.++.+++.+..++..  .+  +   +.+.+       ...|+|
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~---~~~~~-------~~aDiV  190 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--S---PEEVI-------DKVQVI  190 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--C---GGGTG-------GGCSEE
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--h---HHhhh-------cCCCEE
Confidence            567899999996 799999999999999999999999888777766544221  11  2   11222       258999


Q ss_pred             EECCccC
Q 023708           94 FNNAGIS  100 (278)
Q Consensus        94 i~nag~~  100 (278)
                      |++....
T Consensus       191 i~atp~~  197 (275)
T 2hk9_A          191 VNTTSVG  197 (275)
T ss_dssp             EECSSTT
T ss_pred             EEeCCCC
Confidence            9998753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.96  E-value=0.0033  Score=53.38  Aligned_cols=73  Identities=21%  Similarity=0.286  Sum_probs=53.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++.+++++|.|+ |+||+++++.|...|++|++.+|+.++.+.+.+ .+...+.     .+++++++       ...|+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~~-----~~~l~~~l-------~~aDv  218 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFH-----TDELKEHV-------KDIDI  218 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCEEEE-----GGGHHHHS-------TTCSE
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCeEEc-----hhhHHHHh-------hCCCE
Confidence            4688999999996 999999999999999999999998776554433 3433321     12233333       36899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      ||++...
T Consensus       219 Vi~~~p~  225 (300)
T 2rir_A          219 CINTIPS  225 (300)
T ss_dssp             EEECCSS
T ss_pred             EEECCCh
Confidence            9988763

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.96  E-value=0.00053  Score=59.27  Aligned_cols=116  Identities=18%  Similarity=0.167  Sum_probs=67.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--e-----EEEEecch--HHHHHHHhhh---CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--H-----IVIADILD--ELGAALASTI---GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~-----Vi~~~r~~--~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+++||||+|.+|.+++..|+..|.  .     +++.++.+  +..+....++   ...+. .++....+..+       
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~-------   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEI-------   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHH-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHH-------
Confidence            5799999999999999999998875  5     88988864  2332222111   11111 12211111122       


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCc-EEEEecCch
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKG-SIICTSSSA  152 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-~iv~vsS~~  152 (278)
                      .+...|++|+.||....++    .+   -.+.++.|+.....+.+.+.+.    ..++ .++++|-..
T Consensus        76 ~~~daDvVvitAg~prkpG----~t---R~dll~~N~~i~~~i~~~i~~~----~~~~~~vivvsNPv  132 (333)
T 5mdh_A           76 AFKDLDVAILVGSMPRRDG----ME---RKDLLKANVKIFKCQGAALDKY----AKKSVKVIVVGNPA  132 (333)
T ss_dssp             HTTTCSEEEECCSCCCCTT----CC---TTTTHHHHHHHHHHHHHHHHHH----SCTTCEEEECSSSH
T ss_pred             HhCCCCEEEEeCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEcCCch
Confidence            2347999999998642211    11   2345667776665555554443    3245 577777644

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.94  E-value=0.0021  Score=56.36  Aligned_cols=79  Identities=15%  Similarity=0.191  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCC-HHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTK-EEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...+ .|..+ .+++.+.+.++.  .+++|++
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~v-i~~~~~~~~~~~~i~~~t--~gg~Dvv  265 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATEC-LNPKDYDKPIYEVICEKT--NGGVDYA  265 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEE-ECGGGCSSCHHHHHHHHT--TSCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEE-EecccccchHHHHHHHHh--CCCCCEE
Confidence            4789999996 9999998888878899 7999988877665554 4554322 34332 122333333322  2479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       266 id~~g~  271 (373)
T 1p0f_A          266 VECAGR  271 (373)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.93  E-value=0.0012  Score=57.41  Aligned_cols=69  Identities=16%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+.+. +++...+.   ++.+.+.+          ++|++|.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~---~~~~~~~~----------~~D~vid  240 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFY---TDPKQCKE----------ELDFIIS  240 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTCSEEE---SSGGGCCS----------CEEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCeec---CCHHHHhc----------CCCEEEE
Confidence            5889999997 99999998888889999999998877766554 45544333   34432221          7999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      ++|.
T Consensus       241 ~~g~  244 (348)
T 3two_A          241 TIPT  244 (348)
T ss_dssp             CCCS
T ss_pred             CCCc
Confidence            9874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0037  Score=55.22  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...  .|.++.+.+.+.+.++.. -.++|++|
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~--i~~~~~~~~~~~v~~~t~-g~g~Dvvi  259 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEI--ADLSLDTPLHEQIAALLG-EPEVDCAV  259 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCEE--EETTSSSCHHHHHHHHHS-SSCEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCCcE--EccCCcchHHHHHHHHhC-CCCCCEEE
Confidence            5789999995 9999988887777899 688888888776655 4556553  455443322222222211 12699999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .++|.
T Consensus       260 d~~G~  264 (398)
T 1kol_A          260 DAVGF  264 (398)
T ss_dssp             ECCCT
T ss_pred             ECCCC
Confidence            99985

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.88  E-value=0.0018  Score=57.17  Aligned_cols=50  Identities=16%  Similarity=0.260  Sum_probs=40.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY   65 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~   65 (278)
                      .+.+++++|+|+ |++|+.+++.+...|++|++.+++.++.+.+.+ ++..+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~  218 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKF  218 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeE
Confidence            568999999996 899999999999999999999998766655543 55444

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.85  E-value=0.028  Score=48.28  Aligned_cols=139  Identities=12%  Similarity=0.052  Sum_probs=80.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+++.|+|+ |.+|.+++..|+..|.  .|++.++++++.+....++         ++.....|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            467999996 9999999999999997  8999999877665432211         11222111   1           1


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------CC
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------GG  157 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------~~  157 (278)
                      .+...|++|..+|....  +  ..+..   +.++.|+.-...    +.+.+.+...++.++++|-.....        ++
T Consensus        70 a~~~aDvVvi~ag~p~k--p--G~~R~---dL~~~N~~Iv~~----i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g~  138 (326)
T 3pqe_A           70 DCKDADIVCICAGANQK--P--GETRL---ELVEKNLKIFKG----IVSEVMASGFDGIFLVATNPVDILTYATWKFSGL  138 (326)
T ss_dssp             GGTTCSEEEECCSCCCC--T--TCCHH---HHHHHHHHHHHH----HHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEEecccCCC--C--CccHH---HHHHHHHHHHHH----HHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcCC
Confidence            23479999999986422  1  22222   345666544444    444444433367888887654321        23


Q ss_pred             CCCchhhh-hHHHHHHHHHHHHHHH
Q 023708          158 LASHAYSL-SKEAIIGLARSTACEL  181 (278)
Q Consensus       158 ~~~~~Y~~-sK~a~~~l~~~l~~e~  181 (278)
                      |.....+. +-.=-..+-..++..+
T Consensus       139 p~~rviG~gt~LD~~R~~~~la~~l  163 (326)
T 3pqe_A          139 PKERVIGSGTTLDSARFRFMLSEYF  163 (326)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CHHHEEeeccccHHHHHHHHHHHHh
Confidence            33333443 3322234555566665

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.85  E-value=0.005  Score=52.08  Aligned_cols=72  Identities=19%  Similarity=0.277  Sum_probs=52.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .++.+++++|.|+ |+||+++++.|...|++|++.+|+.+..+.+. ..+..++  +   .+++++++       ...|+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~--~---~~~l~~~l-------~~aDv  216 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGMEPF--H---ISKAAQEL-------RDVDV  216 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSEEE--E---GGGHHHHT-------TTCSE
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCeec--C---hhhHHHHh-------cCCCE
Confidence            3688999999995 89999999999999999999999876654443 3344432  1   12233333       36899


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      |+++..
T Consensus       217 Vi~~~p  222 (293)
T 3d4o_A          217 CINTIP  222 (293)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            998874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.85  E-value=0.0044  Score=54.22  Aligned_cols=78  Identities=13%  Similarity=0.114  Sum_probs=53.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh-cCCccEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW-KGQLDIM   93 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~id~l   93 (278)
                      -.++++||+||+|++|...++.+...|++|+.+. ++++.+ +.++++... ..|..+.+ +   .+.+.+. .+++|++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~-vi~~~~~~-~---~~~v~~~t~g~~d~v  235 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEE-VFDYRAPN-L---AQTIRTYTKNNLRYA  235 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSE-EEETTSTT-H---HHHHHHHTTTCCCEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcE-EEECCCch-H---HHHHHHHccCCccEE
Confidence            4688999999999999999998888999999876 444444 445555432 23555443 2   2233332 2469999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.+.|.
T Consensus       236 ~d~~g~  241 (371)
T 3gqv_A          236 LDCITN  241 (371)
T ss_dssp             EESSCS
T ss_pred             EECCCc
Confidence            999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.82  E-value=0.0024  Score=57.71  Aligned_cols=73  Identities=15%  Similarity=0.171  Sum_probs=61.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ..++|.|+ |-+|+.+|+.|.++|++|++++++++.++.+.+.+++.++..|.++++-++++=-      ...|.+|...
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi------~~ad~~ia~t   76 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGA------QDADMLVAVT   76 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTT------TTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCC------CcCCEEEEEc
Confidence            35788887 6899999999999999999999999999999888888999999999997776521      2578887554

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.79  E-value=0.0032  Score=52.39  Aligned_cols=69  Identities=26%  Similarity=0.343  Sum_probs=53.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+..+..   .  .+.+   ++        ...|+|
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~---~--~~~~---~~--------~~~Div  175 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR---A--VPLE---KA--------REARLL  175 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE---E--CCGG---GG--------GGCSEE
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc---h--hhHh---hc--------cCCCEE
Confidence            5778 8999997 77999999999999999999999988877777666543   1  2221   11        268999


Q ss_pred             EECCccC
Q 023708           94 FNNAGIS  100 (278)
Q Consensus        94 i~nag~~  100 (278)
                      |++.+..
T Consensus       176 i~~tp~~  182 (263)
T 2d5c_A          176 VNATRVG  182 (263)
T ss_dssp             EECSSTT
T ss_pred             EEccCCC
Confidence            9998753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.76  E-value=0.0038  Score=55.21  Aligned_cols=78  Identities=18%  Similarity=0.213  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC-CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG-QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~l   93 (278)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++..+  .|..+.+.+.+.+.++.  .+ ++|++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~--i~~~~~~~~~~~~~~~~--~g~g~Dvv  258 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DAGFET--IDLRNSAPLRDQIDQIL--GKPEVDCG  258 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TTTCEE--EETTSSSCHHHHHHHHH--SSSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcE--EcCCCcchHHHHHHHHh--CCCCCCEE
Confidence            5789999997 9999988888777899 8999999887776554 456543  45544332122222221  13 69999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       259 id~~g~  264 (398)
T 2dph_A          259 VDAVGF  264 (398)
T ss_dssp             EECSCT
T ss_pred             EECCCC
Confidence            999984

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.73  E-value=0.00033  Score=60.38  Aligned_cols=74  Identities=16%  Similarity=0.261  Sum_probs=48.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      ++||+||+|++|..+++.+...|++|+++++++++.+.+. +++...+ .|..+.+  .+.++++  ..+++|++|.++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v-~~~~~~~--~~~~~~~--~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEV-ISREDVY--DGTLKAL--SKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEE-EEHHHHC--SSCCCSS--CCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEE-EECCCch--HHHHHHh--hcCCccEEEECCc
Confidence            7999999999999999988889999999998876655543 3453322 2321110  0111111  1136999999987

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0059  Score=53.35  Aligned_cols=76  Identities=16%  Similarity=0.234  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-CCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-GQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id~l   93 (278)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...+ .|..+.+-.    +++.+.. +++|++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~v-i~~~~~~~~----~~~~~~~~gg~D~v  262 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHV-INSKTQDPV----AAIKEITDGGVNFA  262 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEE-EETTTSCHH----HHHHHHTTSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCCEE-ecCCccCHH----HHHHHhcCCCCcEE
Confidence            4789999995 8999999888778899 6888988887766553 4454322 344433222    2222222 379999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      |.++|
T Consensus       263 id~~g  267 (371)
T 1f8f_A          263 LESTG  267 (371)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99987

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.72  E-value=0.0032  Score=54.70  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-C-CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-G-QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g-~id~   92 (278)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... ..|..+.+    +.+++.+.. + ++|+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-vi~~~~~~----~~~~v~~~t~g~g~D~  238 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGATD-IINYKNGD----IVEQILKATDGKGVDK  238 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTCCE-EECGGGSC----HHHHHHHHTTTCCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCce-EEcCCCcC----HHHHHHHHcCCCCCCE
Confidence            4788999996 8999998888888899 799999887766544 4455432 23443333    223333333 2 5999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.++|.
T Consensus       239 v~d~~g~  245 (352)
T 3fpc_A          239 VVIAGGD  245 (352)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.69  E-value=0.068  Score=45.60  Aligned_cols=143  Identities=18%  Similarity=0.154  Sum_probs=81.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc--hHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL--DELGAALASTI---------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~--~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ++.+++.|+|+ |.+|..++..|+..|. +|++.+++  ++..+....++         .......+  +.         
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~---------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY---------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG---------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH---------
Confidence            35678999997 9999999999999999 99999998  44443322111         01111111  11         


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh--------
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--------  154 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~--------  154 (278)
                        +.+...|++|..+|....+    ..+.   .+.++.|+.-...+.+.+.+.    ..++.++++|-....        
T Consensus        74 --~a~~~aDvVIiaag~p~kp----g~~R---~dl~~~N~~i~~~i~~~i~~~----~p~a~vlvvsNPvd~~t~~~~k~  140 (315)
T 3tl2_A           74 --ADTADSDVVVITAGIARKP----GMSR---DDLVATNSKIMKSITRDIAKH----SPNAIIVVLTNPVDAMTYSVFKE  140 (315)
T ss_dssp             --GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHHHHHHHHHHH
T ss_pred             --HHhCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh----CCCeEEEECCChHHHHHHHHHHh
Confidence              2335799999999964222    2233   345566665544444444443    336788888754432        


Q ss_pred             cCCCCCchhhh-hHHHHHHHHHHHHHHHC
Q 023708          155 MGGLASHAYSL-SKEAIIGLARSTACELG  182 (278)
Q Consensus       155 ~~~~~~~~Y~~-sK~a~~~l~~~l~~e~~  182 (278)
                      .+.|.....+. +-.=-..+-..++..+.
T Consensus       141 sg~p~~rviG~gt~LD~~R~~~~la~~lg  169 (315)
T 3tl2_A          141 AGFPKERVIGQSGVLDTARFRTFIAQELN  169 (315)
T ss_dssp             HCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             cCCChHHEEeeccCcHHHHHHHHHHHHhC
Confidence            12333333444 22223445556666653

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.68  E-value=0.0014  Score=56.11  Aligned_cols=73  Identities=21%  Similarity=0.285  Sum_probs=49.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++ +||+||+|++|...++.+...|++|+++++++++.+.+.+ ++...+ .|..+.+.    ++++  ..+++|+++.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v-i~~~~~~~----~~~~--~~~~~d~v~d~  218 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LGANRI-LSRDEFAE----SRPL--EKQLWAGAIDT  218 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTCSEE-EEGGGSSC----CCSS--CCCCEEEEEES
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEE-EecCCHHH----HHhh--cCCCccEEEEC
Confidence            35 9999999999999999888899999999988777665543 453322 23222211    1111  12468999988


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      +|
T Consensus       219 ~g  220 (324)
T 3nx4_A          219 VG  220 (324)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.58  E-value=0.016  Score=50.02  Aligned_cols=101  Identities=19%  Similarity=0.264  Sum_probs=65.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc-C-CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK-G-QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g-~id~   92 (278)
                      .+.++||+|+ |++|...++.+... |++|+++++++++.+.+. +++...+ .|-.+ +..    +++.+.. + ++|+
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~~-i~~~~-~~~----~~v~~~t~g~g~d~  242 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAA-VKSGA-GAA----DAIRELTGGQGATA  242 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSEE-EECST-THH----HHHHHHHGGGCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEE-EcCCC-cHH----HHHHHHhCCCCCeE
Confidence            5789999998 99999888777666 789999999888776554 4454322 23222 222    2222222 2 7999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      ++.+.|..                          ..++.++..++.   .|+++.++....
T Consensus       243 v~d~~G~~--------------------------~~~~~~~~~l~~---~G~iv~~G~~~~  274 (345)
T 3jv7_A          243 VFDFVGAQ--------------------------STIDTAQQVVAV---DGHISVVGIHAG  274 (345)
T ss_dssp             EEESSCCH--------------------------HHHHHHHHHEEE---EEEEEECSCCTT
T ss_pred             EEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEECCCCC
Confidence            99998741                          134445555544   589999876543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.56  E-value=0.0095  Score=50.34  Aligned_cols=38  Identities=21%  Similarity=0.425  Sum_probs=31.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILD   51 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~   51 (278)
                      ..|++++|+|.|+ ||+|.+++..|++.|. ++.+++.+.
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            3567889999986 7999999999999996 677876543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.56  E-value=0.0052  Score=53.62  Aligned_cols=50  Identities=22%  Similarity=0.324  Sum_probs=43.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCe
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR   64 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~   64 (278)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++.++.++.+..
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence            689999999997 88999999999999999999999988887777665543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.55  E-value=0.0073  Score=52.29  Aligned_cols=121  Identities=17%  Similarity=0.168  Sum_probs=66.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecchH--HHHHHHhhh---CC-eEEEecCCCHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGA-------HIVIADILDE--LGAALASTI---GG-RYIHCDVTKEEDVE   77 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~~--~~~~~~~~~---~~-~~~~~D~~~~~~i~   77 (278)
                      .+..++.-+|.|+||+|+||..++..|+....       .+++.+..+.  .++.+..++   .. ........+.  ..
T Consensus        18 ~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~--~~   95 (345)
T 4h7p_A           18 GPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTAD--PR   95 (345)
T ss_dssp             ----CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESC--HH
T ss_pred             CCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCC--hH
Confidence            34556677899999999999999999987643       5888887642  222222111   11 0111111111  11


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-CCCcEEEEecCc
Q 023708           78 SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-QRKGSIICTSSS  151 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~iv~vsS~  151 (278)
                      +       .+...|++|..||....  |  ..+.+|   .++.|..=    ++...+.+.+. .....++++|-.
T Consensus        96 ~-------a~~~advVvi~aG~prk--p--GmtR~D---Ll~~Na~I----~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 V-------AFDGVAIAIMCGAFPRK--A--GMERKD---LLEMNARI----FKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             H-------HTTTCSEEEECCCCCCC--T--TCCHHH---HHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             H-------HhCCCCEEEECCCCCCC--C--CCCHHH---HHHHhHHH----HHHHHHHHHhhccCceEEEEeCCC
Confidence            2       23479999999997422  2  234443   45666543    44455555442 224566666643

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.52  E-value=0.0035  Score=54.09  Aligned_cols=71  Identities=17%  Similarity=0.171  Sum_probs=57.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .+.++|.|+ +.+|+.+++.|.++|. |++++++++..+ +. ..+..++.+|.+|++.++++      ...+.|.+|..
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~~~~~~i~gd~~~~~~L~~a------~i~~a~~vi~~  184 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL-RSGANFVHGDPTRVSDLEKA------NVRGARAVIVD  184 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-HTTCEEEESCTTSHHHHHHT------CSTTEEEEEEC
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-hCCcEEEEeCCCCHHHHHhc------ChhhccEEEEc
Confidence            457999997 8999999999999999 999999988877 44 45678999999999877764      11267888866


Q ss_pred             C
Q 023708           97 A   97 (278)
Q Consensus        97 a   97 (278)
                      .
T Consensus       185 ~  185 (336)
T 1lnq_A          185 L  185 (336)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.52  E-value=0.01  Score=52.02  Aligned_cols=72  Identities=18%  Similarity=0.264  Sum_probs=53.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..-+.+|+++|.|+ |.+|+.+++.+.+.|++|++++......   .......++..|..|.+.+.++++.       +|
T Consensus         7 ~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p---~~~~ad~~~~~~~~d~~~l~~~~~~-------~d   75 (377)
T 3orq_A            7 NKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP---CRYVAHEFIQAKYDDEKALNQLGQK-------CD   75 (377)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT---TGGGSSEEEECCTTCHHHHHHHHHH-------CS
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh---hhhhCCEEEECCCCCHHHHHHHHHh-------CC
Confidence            34567899999985 5799999999999999999988754311   1122235677899999988888753       67


Q ss_pred             EEE
Q 023708           92 IMF   94 (278)
Q Consensus        92 ~li   94 (278)
                      +++
T Consensus        76 vi~   78 (377)
T 3orq_A           76 VIT   78 (377)
T ss_dssp             EEE
T ss_pred             cce
Confidence            764

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.38  E-value=0.012  Score=51.86  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=54.6

Q ss_pred             cCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708            6 DTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus         6 ~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .+++|+.+-+.+|+++|.|++ .+|+.+++.+.+.|++|++++.....-   ........+..|..|.+.+.++++    
T Consensus         3 ~~~~m~~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~---~~~~ad~~~~~~~~d~~~l~~~~~----   74 (389)
T 3q2o_A            3 HMLDMTRIILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSP---CAQVADIEIVASYDDLKAIQHLAE----   74 (389)
T ss_dssp             ----CCCCCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCT---TTTTCSEEEECCTTCHHHHHHHHH----
T ss_pred             ccccccccCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCc---hHHhCCceEecCcCCHHHHHHHHH----
Confidence            456777777889999999876 499999999999999999987654211   011122456678888888877775    


Q ss_pred             hcCCccEEE
Q 023708           86 WKGQLDIMF   94 (278)
Q Consensus        86 ~~g~id~li   94 (278)
                         +.|++.
T Consensus        75 ---~~dvI~   80 (389)
T 3q2o_A           75 ---ISDVVT   80 (389)
T ss_dssp             ---TCSEEE
T ss_pred             ---hCCEee
Confidence               467764

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.36  E-value=0.049  Score=46.00  Aligned_cols=38  Identities=29%  Similarity=0.453  Sum_probs=33.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAA   56 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~   56 (278)
                      +++.|.|+ |.+|..+|..|++.|++|++.+|+++..+.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            67889988 899999999999999999999998776554

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.32  E-value=0.05  Score=46.62  Aligned_cols=114  Identities=17%  Similarity=0.257  Sum_probs=67.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+....++         .......+  |.           
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d~-----------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN--DY-----------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES--SG-----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC--CH-----------
Confidence            45678999998 9999999999999998 9999998876554221111         11222111  11           


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +.+...|++|..+|....++    .+.   .+.+..|+.-..    .+.+.+.+...++.++++|-...
T Consensus        71 ~a~~~aDiVIiaag~p~k~G----~~R---~dl~~~N~~i~~----~i~~~i~~~~p~a~iivvtNPvd  128 (324)
T 3gvi_A           71 AAIEGADVVIVTAGVPRKPG----MSR---DDLLGINLKVME----QVGAGIKKYAPEAFVICITNPLD  128 (324)
T ss_dssp             GGGTTCSEEEECCSCCCC------------CHHHHHHHHHHH----HHHHHHHHHCTTCEEEECCSSHH
T ss_pred             HHHCCCCEEEEccCcCCCCC----CCH---HHHHHhhHHHHH----HHHHHHHHHCCCeEEEecCCCcH
Confidence            12247899999998642211    121   234555554444    44444444333678888876543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.32  E-value=0.0028  Score=55.16  Aligned_cols=80  Identities=13%  Similarity=0.100  Sum_probs=47.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE---LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .|.++||+||+|++|...++.+...|++|+++.+..+   ...+..++++...+ .|..+ ...++ +.++....+++|+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~~~-~~~~~-~~~~~~~~~~~Dv  243 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-ITEEE-LRRPE-MKNFFKDMPQPRL  243 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-EEHHH-HHSGG-GGGTTSSSCCCSE
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-EecCc-chHHH-HHHHHhCCCCceE
Confidence            5789999999999999888877778999887765322   12233445554322 12111 10111 1111111125899


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      +|.+.|
T Consensus       244 vid~~g  249 (357)
T 1zsy_A          244 ALNCVG  249 (357)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999887

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.29  E-value=0.031  Score=46.89  Aligned_cols=80  Identities=11%  Similarity=0.049  Sum_probs=55.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC---eEEEEecchHHHHHHHhhhCCeE-------------EEecCCCHHHHHHHH
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA---HIVIADILDELGAALASTIGGRY-------------IHCDVTKEEDVESAV   80 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~-------------~~~D~~~~~~i~~~~   80 (278)
                      .+++.|.|+ |.+|.+++..|.+.|+   +|++.+|+++..+.+.+..++.+             +-.-+ .++.+.+++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~vl   80 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKMVC   80 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHHHH
Confidence            356778887 8999999999999998   89999999888887766544322             22222 356677777


Q ss_pred             HHHHhh-cCCccEEEECCc
Q 023708           81 RLAVSW-KGQLDIMFNNAG   98 (278)
Q Consensus        81 ~~~~~~-~g~id~li~nag   98 (278)
                      +++... ..+=.++|++++
T Consensus        81 ~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           81 EELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHTTTCEEEECCT
T ss_pred             HHHHhhccCCCeEEEEecC
Confidence            777654 332236676654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.22  E-value=0.064  Score=45.93  Aligned_cols=114  Identities=16%  Similarity=0.199  Sum_probs=68.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+....++         .......+  +.           
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------
Confidence            34567888995 9999999999999987 9999998876654322211         11221111  11           


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +.+...|++|..+|....+    ..+..   +.+..|+.-...+.+    .+.+...++.++++|-...
T Consensus        69 ~a~~~aDvVIi~ag~p~k~----G~~R~---dl~~~N~~i~~~i~~----~i~~~~p~a~vivvtNPvd  126 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKP----GMSRD---DLLGINIKVMQTVGE----GIKHNCPNAFVICITNPLD  126 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCT----TCCHH---HHHHHHHHHHHHHHH----HHHHHCTTCEEEECCSSHH
T ss_pred             HHHCCCCEEEEcCCcCCCC----CCCHH---HHHHHhHHHHHHHHH----HHHHHCCCcEEEEecCchH
Confidence            1234689999999864222    22333   344555554444444    4444333678888765443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.22  E-value=0.0042  Score=53.01  Aligned_cols=68  Identities=10%  Similarity=0.121  Sum_probs=47.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+|+ |++|...++.+...|++|++++ ++++.+.+ ++++...+. |  |   .+++       .+++|+++.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa~~v~-~--d---~~~v-------~~g~Dvv~d  205 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGVRHLY-R--E---PSQV-------TQKYFAIFD  205 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTEEEEE-S--S---GGGC-------CSCEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCCCEEE-c--C---HHHh-------CCCccEEEE
Confidence            5789999999 9999999888888899999988 65555444 445544332 3  2   1221       347999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      +.|.
T Consensus       206 ~~g~  209 (315)
T 3goh_A          206 AVNS  209 (315)
T ss_dssp             C---
T ss_pred             CCCc
Confidence            8874

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.19  E-value=0.013  Score=49.62  Aligned_cols=137  Identities=16%  Similarity=0.164  Sum_probs=80.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHH----Hhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAAL----ASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~----~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+++++..+..    ....     .......  +|.+    .       +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a-------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----L-------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----G-------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH----H-------h
Confidence            5889999 9999999999999997  899999988765421    1111     1111111  1211    1       2


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh--------cCCCC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--------MGGLA  159 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~~  159 (278)
                      ...|++|..+|....+    ..+..   +.++.|+    .+++.+.+.+.+...++.++++|-....        .++|.
T Consensus        68 ~~aDiVViaag~~~kp----G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p~  136 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP----GMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPR  136 (294)
T ss_dssp             TTCSEEEECCCCCCCS----SCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCCT
T ss_pred             CCCCEEEECCCCCCCC----CCcHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCCH
Confidence            3689999999864221    22333   3355554    3455666666664446788888765432        13343


Q ss_pred             Cchhhh-hHHHHHHHHHHHHHHH
Q 023708          160 SHAYSL-SKEAIIGLARSTACEL  181 (278)
Q Consensus       160 ~~~Y~~-sK~a~~~l~~~l~~e~  181 (278)
                      ....+. +-.=-..+-..++ ++
T Consensus       137 ~rviG~gt~LD~~R~~~~la-~l  158 (294)
T 1oju_A          137 NEVFGMGNQLDSQRLKERLY-NA  158 (294)
T ss_dssp             TSEEECSHHHHHHHHHHHHH-HT
T ss_pred             HHEeecccccHHHHHHHHHH-Hh
Confidence            334454 2332334555566 55

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.18  E-value=0.005  Score=55.33  Aligned_cols=87  Identities=17%  Similarity=0.231  Sum_probs=51.5

Q ss_pred             CCCcccCCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcC-C---eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH
Q 023708            1 MEARDDTNKLSSKRLTGKVAVITGGARGIGAATAKLFAENG-A---HIVIADILDELGAALASTIGGRYIHCDVTKEEDV   76 (278)
Q Consensus         1 ~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g-~---~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   76 (278)
                      |.+++.+...   .+++| ++|.| .|++|+.+++.|++.. .   .|++++..... .++.+..++.+...+++.. .+
T Consensus         1 ~~~~~~~~~~---~~~~r-VlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdad-nv   73 (480)
T 2ph5_A            1 MDKNHNTKKI---LFKNR-FVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQ-NY   73 (480)
T ss_dssp             -----CTTCB---CCCSC-EEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTT-TH
T ss_pred             CCccccccee---cCCCC-EEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhHHhhcCCceeEEeccch-hH
Confidence            5556655544   33344 88888 8999999999999874 4   68888765443 2333444666776776543 23


Q ss_pred             HHHHHHHHhhcCCccEEEECC
Q 023708           77 ESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~na   97 (278)
                      ++.++.+.+.  + |+|||.+
T Consensus        74 ~~~l~aLl~~--~-DvVIN~s   91 (480)
T 2ph5_A           74 LEVIGSTLEE--N-DFLIDVS   91 (480)
T ss_dssp             HHHTGGGCCT--T-CEEEECC
T ss_pred             HHHHHHHhcC--C-CEEEECC
Confidence            3334333322  3 9999744

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=96.17  E-value=0.025  Score=49.26  Aligned_cols=54  Identities=20%  Similarity=0.271  Sum_probs=32.1

Q ss_pred             CCcEEEEeCCCChh---HHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEec
Q 023708           16 TGKVAVITGGARGI---GAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCD   69 (278)
Q Consensus        16 ~~k~vlVtGas~gi---G~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D   69 (278)
                      ++|+++.+|||+|-   +.++|++|.++|++|+.++.......++....++.+...+
T Consensus         2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~   58 (365)
T 3s2u_A            2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQ   58 (365)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC
T ss_pred             CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEE
Confidence            44555555556543   6889999999999998766433222334444444444444

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.17  E-value=0.0021  Score=55.86  Aligned_cols=47  Identities=34%  Similarity=0.511  Sum_probs=38.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      ++.||++.|.| .|.+|..+++.|.+.|++|++.+++.++ .+..+..+
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~g  218 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALG  218 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTT
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcC
Confidence            68999999996 5999999999999999999988877654 33444444

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.14  E-value=0.018  Score=47.35  Aligned_cols=77  Identities=10%  Similarity=0.115  Sum_probs=56.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++.|.|++|.+|+.+++.+.+. ++.|+.+....+..+++.. .+.. +..|++.++.+.+.+....+.  ++++||-..
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~VigTT   77 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVGTT   77 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCC-EEEECSCTTTHHHHHHHHHHT--TCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCc-EEEEccChHHHHHHHHHHHHc--CCCEEEcCC
Confidence            5899999999999999999865 8998865433222333332 1223 667999999988888777665  788998776


Q ss_pred             cc
Q 023708           98 GI   99 (278)
Q Consensus        98 g~   99 (278)
                      |.
T Consensus        78 G~   79 (245)
T 1p9l_A           78 GF   79 (245)
T ss_dssp             CC
T ss_pred             CC
Confidence            63

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.13  E-value=0.043  Score=45.37  Aligned_cols=82  Identities=18%  Similarity=0.242  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCe-EEEEecchHHHHHHHhhhCCeE-------------EEecCCCHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAH-IVIADILDELGAALASTIGGRY-------------IHCDVTKEEDVESAVR   81 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~-------------~~~D~~~~~~i~~~~~   81 (278)
                      .+.++.|.|+ |.+|..++..|.+.|++ |.+.+|+++..+.+.+..++..             +-.- .....+.++++
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~~   86 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELLQ   86 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHHH
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHHH
Confidence            3456888887 99999999999999998 8889999888777665533221             1111 23446677777


Q ss_pred             HHHhhcCCccEEEECCcc
Q 023708           82 LAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        82 ~~~~~~g~id~li~nag~   99 (278)
                      ++.....+=.++|++.+.
T Consensus        87 ~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHTTCCTTCEEEECCTT
T ss_pred             HHHhhcCCCcEEEECCCC
Confidence            776543333467777654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.12  E-value=0.067  Score=44.67  Aligned_cols=166  Identities=13%  Similarity=0.099  Sum_probs=93.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHH-cCCeEE-EEecchHHH--H-----------------HHHhhh-CCeEEEecCCCHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAE-NGAHIV-IADILDELG--A-----------------ALASTI-GGRYIHCDVTKEED   75 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~-~g~~Vi-~~~r~~~~~--~-----------------~~~~~~-~~~~~~~D~~~~~~   75 (278)
                      ..++|+|++|.+|+.+++.+.+ .|+.++ ++++..+..  .                 .+.+.+ ++. +..|++.++.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D-vVIDft~p~~   84 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   84 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC-EEEEcCChHH
Confidence            4799999999999999999875 577777 445443210  0                 011111 122 4568999998


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHH-------HHHHhH----HHHHHHHHHHHHHHccCCCcE
Q 023708           76 VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL-------LSVNLN----GILHGIKHAAKAMIEGQRKGS  144 (278)
Q Consensus        76 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~-------~~~N~~----~~~~l~~~~~~~~~~~~~~~~  144 (278)
                      ..+.+....+.  ++.+++-..|.. .      ...+.+.+.       +-.|+-    -.+.+++.+.+.+..   .-.
T Consensus        85 ~~~~~~~a~~~--G~~vVigTtG~~-~------e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~---~~d  152 (273)
T 1dih_A           85 TLNHLAFCRQH--GKGMVIGTTGFD-E------AGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD---YTD  152 (273)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCCC-H------HHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT---TSE
T ss_pred             HHHHHHHHHhC--CCCEEEECCCCC-H------HHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC---CCC
Confidence            88888877765  678887666532 0      001222221       111111    133344444444421   112


Q ss_pred             EEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHH---------------CCCCcEEEEecCCCCCCh
Q 023708          145 IICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACEL---------------GKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       145 iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~---------------~~~~i~v~~v~pG~v~t~  199 (278)
                      +-.+   ..+....--.+||.++...+.+.+.+...+               .+.+|.|.+++-|.+..+
T Consensus       153 ieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          153 IEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             EEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             EEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            2222   222333334568999998888877665432               134789999986655443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.11  E-value=0.0073  Score=50.60  Aligned_cols=38  Identities=32%  Similarity=0.473  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .+++||.++|.|+|+-+|+.++..|.++|++|.++.+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999998764

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.10  E-value=0.019  Score=49.50  Aligned_cols=76  Identities=20%  Similarity=0.237  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~   92 (278)
                      .|.++||+|+ +++|...+..+.+. |++|+++++++++.+...+ .+... ..|-.+.+..++    +.+..+  ++|.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~Ga~~-~i~~~~~~~~~~----v~~~t~g~g~d~  235 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGADV-TINSGDVNPVDE----IKKITGGLGVQS  235 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-TTCSE-EEEC-CCCHHHH----HHHHTTSSCEEE
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-cCCeE-EEeCCCCCHHHH----hhhhcCCCCceE
Confidence            5789999987 67777677766655 7899999998887654443 34322 235555443333    333332  5788


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      ++.+++
T Consensus       236 ~~~~~~  241 (348)
T 4eez_A          236 AIVCAV  241 (348)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            888775

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.07  E-value=0.014  Score=46.89  Aligned_cols=65  Identities=17%  Similarity=0.166  Sum_probs=47.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .+++.|.| .|.+|.++++.|.+.|++|++.+|+.+..+.+.+. ++...     +   ..+++       ...|+||.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~-----~---~~~~~-------~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVT-----F---QEEAV-------SSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEEE-----E---HHHHT-------TSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcee-----c---HHHHH-------hCCCEEEEC
Confidence            35688888 89999999999999999999999998776655433 33321     1   22222       368999988


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      ..
T Consensus        91 v~   92 (215)
T 2vns_A           91 VF   92 (215)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.04  E-value=0.033  Score=47.94  Aligned_cols=115  Identities=11%  Similarity=0.123  Sum_probs=71.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-------C-eEEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-------G-RYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-------~-~~~~~D~~~~~~i~~~~~~~   83 (278)
                      ....+++.|+|+ |.+|.+++..|+..|.  .|++.+++++..+....++.       . ..+..  .|.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH---------
Confidence            345678999998 9999999999999997  89999998776655333221       1 11111  1211         


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                        .....|++|..||....+    ..+.   .+.++.|+.-...+.+.+.++    ..++.++++|-...
T Consensus        84 --~~~~aDiVvi~aG~~~kp----G~tR---~dL~~~N~~I~~~i~~~i~~~----~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQE----GESR---LNLVQRNVNIFKFIIPNVVKY----SPQCKLLIVSNPVD  140 (331)
T ss_dssp             --GGTTEEEEEECCSCCCCT----TCCG---GGGHHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             --HhCCCCEEEEccCCCCCC----CccH---HHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecChHH
Confidence              224799999999964222    1222   235566665444444444443    33678888876543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.00  E-value=0.046  Score=47.01  Aligned_cols=80  Identities=18%  Similarity=0.173  Sum_probs=51.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeE-EEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHI-VIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~V-i~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ..+++++|+|+ |++|...++.+...|+.+ +++++++++.+.+ ++++... ..|.++.+ ..+..+++.+ .+..|++
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~lGa~~-~i~~~~~~-~~~~~~~~~~-~~g~d~v  233 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSFGAMQ-TFNSSEMS-APQMQSVLRE-LRFNQLI  233 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSE-EEETTTSC-HHHHHHHHGG-GCSSEEE
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHcCCeE-EEeCCCCC-HHHHHHhhcc-cCCcccc
Confidence            35889999987 899999998888899875 5667777665444 4455332 23443332 2333333322 2468999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      +.++|.
T Consensus       234 ~d~~G~  239 (346)
T 4a2c_A          234 LETAGV  239 (346)
T ss_dssp             EECSCS
T ss_pred             cccccc
Confidence            988873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.95  E-value=0.034  Score=47.34  Aligned_cols=69  Identities=23%  Similarity=0.340  Sum_probs=50.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ..+.++++.|.|. |.||+.+|+.|...|++|+..+|+.+. . .....++.+     .+   ++++++       ..|+
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~-----~~---l~ell~-------~aDv  199 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNGKF-----VD---LETLLK-------ESDV  199 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTCEE-----CC---HHHHHH-------HCSE
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCccc-----cC---HHHHHh-------hCCE
Confidence            5789999999975 999999999999999999999987654 2 223334322     12   344443       4899


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      |+.+...
T Consensus       200 V~l~~p~  206 (307)
T 1wwk_A          200 VTIHVPL  206 (307)
T ss_dssp             EEECCCC
T ss_pred             EEEecCC
Confidence            9888754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.94  E-value=0.0044  Score=52.98  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC--e-EEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--R-YIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~--~-~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++.++.++|.|++.-+|+.+|+.|+..|++|.++.|+..+..+..+.+..  + ......++++++.+.+.       ..
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~A  246 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DS  246 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cC
Confidence            78999999999999999999999999999999998763221111111111  1 11111134466777665       58


Q ss_pred             cEEEECCcc
Q 023708           91 DIMFNNAGI   99 (278)
Q Consensus        91 d~li~nag~   99 (278)
                      |+||...|.
T Consensus       247 DIVIsAtg~  255 (320)
T 1edz_A          247 DVVITGVPS  255 (320)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.90  E-value=0.014  Score=48.23  Aligned_cols=35  Identities=31%  Similarity=0.481  Sum_probs=29.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEec
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADI   49 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r   49 (278)
                      .+++++|+|.|+ ||+|.+++..|+..|. ++.++++
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~   60 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADD   60 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECC
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence            467889999998 7799999999999997 6667643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.90  E-value=0.069  Score=46.46  Aligned_cols=43  Identities=19%  Similarity=0.206  Sum_probs=36.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      +++++.|.| .|.+|..+++.|++.|++|++.+|+++..+.+.+
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~   63 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER   63 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            456788887 6899999999999999999999999887766543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.77  E-value=0.18  Score=42.89  Aligned_cols=138  Identities=20%  Similarity=0.231  Sum_probs=77.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.|+|+ |.+|..++..|+..|.  .|++.++++++.+....++         .......|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            4788997 9999999999999987  8999999876554322111         112221221  1           223


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh--------cCCCC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI--------MGGLA  159 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~--------~~~~~  159 (278)
                      ...|++|..+|....++    .   +=.+.++.|+.    +++.+.+.+.+...++.++++|-....        .++|.
T Consensus        68 ~~aDvVii~ag~~~kpG----~---~R~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~  136 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG----M---SRDDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPT  136 (314)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHHHHH----HHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCG
T ss_pred             CCCCEEEECCCCCCCCC----C---CHHHHHHhhHH----HHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCCh
Confidence            47999999998642211    1   12244555553    355555666554446788887765432        12333


Q ss_pred             Cchhhhh-HHHHHHHHHHHHHHH
Q 023708          160 SHAYSLS-KEAIIGLARSTACEL  181 (278)
Q Consensus       160 ~~~Y~~s-K~a~~~l~~~l~~e~  181 (278)
                      ....+.+ -.=-..+-..++..+
T Consensus       137 ~rviG~~t~LD~~R~~~~la~~l  159 (314)
T 3nep_X          137 NRVMGMAGVLDTGRFRSFIAEEL  159 (314)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHH
T ss_pred             HHEEeecCchHHHHHHHHHHHHh
Confidence            3344443 222344455566665

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.76  E-value=0.03  Score=50.29  Aligned_cols=76  Identities=21%  Similarity=0.193  Sum_probs=51.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE---LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++++|.++|.|. |+.|.++|+.|.++|++|.+.++...   ...+..+..++.++...-. .    ++++      +.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~-~----~~~~------~~   72 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP-L----ELLD------ED   72 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC-G----GGGG------SC
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCCh-H----Hhhc------CC
Confidence            4578999999999 78999999999999999999988431   2222233346655543221 1    1111      13


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|.||.++|+.
T Consensus        73 ~d~vv~spgi~   83 (451)
T 3lk7_A           73 FCYMIKNPGIP   83 (451)
T ss_dssp             EEEEEECTTSC
T ss_pred             CCEEEECCcCC
Confidence            89999999974

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.69  E-value=0.11  Score=43.45  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=37.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      +++.|.|++|.+|.++++.|.+.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999998877766543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.68  E-value=0.1  Score=44.49  Aligned_cols=82  Identities=12%  Similarity=0.092  Sum_probs=56.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------------CCeEEEecCCCHHHHHHHHH--
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------GGRYIHCDVTKEEDVESAVR--   81 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~i~~~~~--   81 (278)
                      +.+++.|.|. |.+|..+++.|++.|++|++.+|+++..+.+.+.-            +..++-.-+.+...++.++.  
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~  108 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ  108 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence            3457777765 89999999999999999999999988777665420            13444555566667777765  


Q ss_pred             HHHhhcCCccEEEECCc
Q 023708           82 LAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        82 ~~~~~~g~id~li~nag   98 (278)
                      ++.+...+=.++|+...
T Consensus       109 ~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          109 GVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            45544333455565543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.64  E-value=0.044  Score=44.30  Aligned_cols=58  Identities=21%  Similarity=0.176  Sum_probs=44.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhhCCeEEEecCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGRYIHCDVT   71 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~D~~   71 (278)
                      .++++|.+||.|| |.+|...++.|++.|++|++++... +.+..+.+..++.++.-++.
T Consensus        27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~   85 (223)
T 3dfz_A           27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG   85 (223)
T ss_dssp             ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC
Confidence            4789999999997 4899999999999999999987653 44555555545666554443

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.62  E-value=0.08  Score=44.30  Aligned_cols=80  Identities=15%  Similarity=0.046  Sum_probs=54.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------------CCeEEEecCCCHHHHHHHH---HH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------GGRYIHCDVTKEEDVESAV---RL   82 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~i~~~~---~~   82 (278)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+++..+.+.+.-            +..++-.-+.+...+++++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            45777774 89999999999999999999999877666554320            1344555566667777777   66


Q ss_pred             HHhhcCCccEEEECCc
Q 023708           83 AVSWKGQLDIMFNNAG   98 (278)
Q Consensus        83 ~~~~~g~id~li~nag   98 (278)
                      +.+...+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6554433345665543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.61  E-value=0.067  Score=45.43  Aligned_cols=81  Identities=11%  Similarity=-0.039  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------------CCeEEEecCCCHHHHHHHH---
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------------GGRYIHCDVTKEEDVESAV---   80 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~i~~~~---   80 (278)
                      +.+++.|.| .|.+|..+++.|++.|++|++.+|+++..+.+.+.-            ...++-.-+.+...+++++   
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~   98 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK   98 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence            345677776 589999999999999999999999887666554320            1334445555666676666   


Q ss_pred             HHHHhhcCCccEEEECC
Q 023708           81 RLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        81 ~~~~~~~g~id~li~na   97 (278)
                      +++.....+=.++|+..
T Consensus        99 ~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           99 GGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             TCGGGGCCTTCEEEECS
T ss_pred             hhhhhccCCCCEEEECC
Confidence            44443332334555554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.60  E-value=0.021  Score=48.14  Aligned_cols=38  Identities=29%  Similarity=0.399  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .+++||.++|.|+++-+|+.++..|.+.|++|.++.|.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999998873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.57  E-value=0.017  Score=48.38  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .+++||.++|.|.|+-+|+.++..|...|++|.++.+.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999998764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.57  E-value=0.018  Score=47.99  Aligned_cols=36  Identities=6%  Similarity=0.121  Sum_probs=33.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ++||.++|.|+++-+|+.++..|.+.|++|.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999998763

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.53  E-value=0.21  Score=42.58  Aligned_cols=108  Identities=17%  Similarity=0.135  Sum_probs=64.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++.|.|+ |.+|..++..|++.|.  +|++.+++++..+.+...+        ... +..  ++.+    .       ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~--~d~~----~-------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYA--GDYA----D-------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEE--CCGG----G-------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcE-EEe--CCHH----H-------hC
Confidence            5789998 9999999999999998  9999999887666544322        111 111  2222    1       13


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ..|++|.+++....+    ..+..   +.+..|+.-...+++.+.+.    ..++.+|+++-..
T Consensus        67 ~aDvViiav~~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~----~~~~~ii~~tNp~  119 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKP----GETRL---QLLGRNARVMKEIARNVSKY----APDSIVIVVTNPV  119 (319)
T ss_dssp             TCSEEEECCCCCCCS----SCCHH---HHHHHHHHHHHHHHHHHHHH----CTTCEEEECSSSH
T ss_pred             CCCEEEEccCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEeCCcH
Confidence            689999999864221    11112   23444444444444444333    2256777765443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.50  E-value=0.019  Score=48.10  Aligned_cols=38  Identities=18%  Similarity=0.352  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      -+++||.++|.|+++-+|+.++..|.++|++|.++.+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999998754

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.47  E-value=0.19  Score=42.57  Aligned_cols=138  Identities=14%  Similarity=0.102  Sum_probs=72.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-Ce------EEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GR------YIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~------~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++.|+|+ |.+|..++..|+..|.  +|++.++++++.+.....+. ..      -+..  .+.           +....
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-----------~a~~~   67 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-----------SELAD   67 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-----------GGGTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-----------HHhCC
Confidence            5889998 9999999999999998  99999998876654333221 11      0111  111           12347


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc------CCCCCchh
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM------GGLASHAY  163 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~------~~~~~~~Y  163 (278)
                      .|++|..+|.....+    .   .-.+.+..|+.-...+++.+.+.    ..++.++++|-.....      -.+.....
T Consensus        68 aDvVIi~~~~~~~~g----~---~r~dl~~~n~~i~~~i~~~i~~~----~p~~~vi~~tNP~~~~~~~~~~~~~~~rvi  136 (304)
T 2v6b_A           68 AQVVILTAGANQKPG----E---SRLDLLEKNADIFRELVPQITRA----APDAVLLVTSNPVDLLTDLATQLAPGQPVI  136 (304)
T ss_dssp             CSEEEECC-------------------CHHHHHHHHHHHHHHHHHH----CSSSEEEECSSSHHHHHHHHHHHSCSSCEE
T ss_pred             CCEEEEcCCCCCCCC----C---cHHHHHHhHHHHHHHHHHHHHHh----CCCeEEEEecCchHHHHHHHHHhCChhcEE
Confidence            899999997542211    1   11234455555444444444443    2256666655433221      11222233


Q ss_pred             hh-hHHHHHHHHHHHHHHH
Q 023708          164 SL-SKEAIIGLARSTACEL  181 (278)
Q Consensus       164 ~~-sK~a~~~l~~~l~~e~  181 (278)
                      +. +-.-...+...++..+
T Consensus       137 G~gt~Ld~~r~~~~la~~l  155 (304)
T 2v6b_A          137 GSGTVLDSARFRHLMAQHA  155 (304)
T ss_dssp             ECTTHHHHHHHHHHHHHHH
T ss_pred             eCCcCchHHHHHHHHHHHh
Confidence            33 3333345555566665

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.43  E-value=0.042  Score=46.42  Aligned_cols=78  Identities=14%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      +++.|.||.|.+|.+++..|.+.|++|++.+|+++. ..+..+...+.++.+   ....+.++++++.....+=.+|+..
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilav---p~~~~~~vl~~l~~~l~~~~iv~~~   98 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSV---PINLTLETIERLKPYLTENMLLADL   98 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECS---CGGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeC---CHHHHHHHHHHHHhhcCCCcEEEEC
Confidence            568899999999999999999999999999887542 223333323333322   2333777777765443222244444


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      ++
T Consensus        99 ~s  100 (298)
T 2pv7_A           99 TS  100 (298)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.42  E-value=0.041  Score=47.47  Aligned_cols=42  Identities=21%  Similarity=0.153  Sum_probs=36.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      +++.|.|+ |.+|..++..|++.|++|++.+|+++..+.+.+.
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~   46 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   46 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhc
Confidence            46888886 8999999999999999999999998887777654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.41  E-value=0.091  Score=45.07  Aligned_cols=112  Identities=12%  Similarity=0.111  Sum_probs=67.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC--------CeEEE-ecCCCHHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG--------GRYIH-CDVTKEEDVESAVRLAV   84 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~--------~~~~~-~D~~~~~~i~~~~~~~~   84 (278)
                      ..+++.|+|+ |.+|..++..|+..|.  .|++.+.+++..+....++.        ..... .|..             
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------------
Confidence            3467999999 9999999999999997  89999998776554322111        11111 1221             


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                       .+...|++|..||....++    .+.+   +.+..|+.-    .+.+.+.+.+...++.++++|-...
T Consensus        86 -~~~daDiVIitaG~p~kpG----~tR~---dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           86 -VSAGSKLVVITAGARQQEG----ESRL---NLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELGT  142 (330)
T ss_dssp             -SCSSCSEEEECCSCCCCSS----CCTT---GGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             -HhCCCCEEEEeCCCCCCCC----CCHH---HHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCccH
Confidence             1247899999999743221    1111   234444433    3444444444333678888876543

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.35  E-value=0.054  Score=44.31  Aligned_cols=41  Identities=17%  Similarity=0.235  Sum_probs=33.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL   53 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~   53 (278)
                      ..++.++++.|.| .|.+|.++++.|++.|++|++.+|+++.
T Consensus        14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           14 NLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            4467788888885 8999999999999999999999999876

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.33  E-value=0.091  Score=44.38  Aligned_cols=79  Identities=14%  Similarity=0.028  Sum_probs=51.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------------CeEEEecCCCHHHHHHHH---H
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------------GRYIHCDVTKEEDVESAV---R   81 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------------~~~~~~D~~~~~~i~~~~---~   81 (278)
                      +++.|.| .|.+|..++..|++.|++|++.+|+++..+.+.+.-.             ..++-.-+.+...++.++   +
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~   86 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED   86 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence            4566775 6899999999999999999999999888777654311             233344444555666665   4


Q ss_pred             HHHhhcCCccEEEECC
Q 023708           82 LAVSWKGQLDIMFNNA   97 (278)
Q Consensus        82 ~~~~~~g~id~li~na   97 (278)
                      ++.+...+=.++|+..
T Consensus        87 ~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           87 GVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             CCGGGSCTTCEEEECS
T ss_pred             hHHhhCCCCCEEEecC
Confidence            4433332334555554

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.27  E-value=0.067  Score=47.68  Aligned_cols=40  Identities=28%  Similarity=0.429  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL   53 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~   53 (278)
                      ..+.||+++|.|. |.||+.+|+.|...|++|+++++++..
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            3589999999995 569999999999999999999887654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.25  E-value=0.24  Score=41.70  Aligned_cols=109  Identities=18%  Similarity=0.202  Sum_probs=67.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh-------C--CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI-------G--GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~-------~--~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.|+|| |++|..+|..|+.++.  ++++.+.+++..+....++       .  ......+  |.+           ..
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence            4778895 9999999999998874  6999998875544322211       1  1122211  221           12


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ..-|++|..||....+    ..+.+   +.++.|..    +++.+.+.+.+...++.++++|-..
T Consensus        68 ~~aDvVvitAG~prkp----GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNPv  121 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKP----GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCS----SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             CCCCEEEEecCCCCCC----CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecCcc
Confidence            3689999999975322    23444   34555654    4556666666644467777776654

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.23  E-value=0.064  Score=47.70  Aligned_cols=71  Identities=14%  Similarity=0.141  Sum_probs=53.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      -+.+|+++|.|+ |-+|+.+++.+.+.|++|++++.+.....   ......++..|..|.+.+.++++       ++|++
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~ad~~~~~~~~d~~~l~~~a~-------~~D~V  100 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVADRHLRAAYDDEAALAELAG-------LCEAV  100 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHSSEEECCCTTCHHHHHHHHH-------HCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch---hhhCCEEEECCcCCHHHHHHHHh-------cCCEE
Confidence            457899999986 47999999999999999999876543211   11223466789999998888873       58988


Q ss_pred             EE
Q 023708           94 FN   95 (278)
Q Consensus        94 i~   95 (278)
                      +.
T Consensus       101 ~~  102 (419)
T 4e4t_A          101 ST  102 (419)
T ss_dssp             EE
T ss_pred             EE
Confidence            83

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.17  E-value=0.32  Score=41.39  Aligned_cols=140  Identities=16%  Similarity=0.135  Sum_probs=79.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +..++.|+|+ |.+|..++..|+..|.  .|++.+.++++.+.....+         .+. +..|  +           .
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~~--~-----------~   69 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVR-VKAG--E-----------Y   69 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCE-EEEC--C-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeE-EEeC--C-----------H
Confidence            4467999999 9999999999999884  7999998876554322111         111 1221  1           1


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------C
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------G  156 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------~  156 (278)
                      +.+...|++|..+|.....    ..+..   +.+..|+.    +++.+.+.+.+...++.++++|-.....        +
T Consensus        70 ~a~~~aDvVvi~ag~~~~~----g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~  138 (317)
T 3d0o_A           70 SDCHDADLVVICAGAAQKP----GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSG  138 (317)
T ss_dssp             GGGTTCSEEEECCCCCCCT----TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             HHhCCCCEEEECCCCCCCC----CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhC
Confidence            1234799999999864221    12222   23444444    3444555554433367777776544321        2


Q ss_pred             CCCCchhhh-hHHHHHHHHHHHHHHH
Q 023708          157 GLASHAYSL-SKEAIIGLARSTACEL  181 (278)
Q Consensus       157 ~~~~~~Y~~-sK~a~~~l~~~l~~e~  181 (278)
                      +|.....|. +-.-...+-..++..+
T Consensus       139 ~p~~rviG~gt~lD~~r~~~~la~~l  164 (317)
T 3d0o_A          139 LPKERVIGSGTILDSARFRLLLSEAF  164 (317)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEecCccccHHHHHHHHHHHh
Confidence            333334444 3333445555666665

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.12  E-value=0.12  Score=45.05  Aligned_cols=79  Identities=13%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             CCccccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708            7 TNKLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus         7 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..||+.   ..+++||+|+ +.+|+.+++.+.+.|++|++++......   .......++..|..|.+.+.+++++.   
T Consensus         4 ~~pm~~---~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~---~~~~~d~~~~~~~~d~~~l~~~~~~~---   73 (391)
T 1kjq_A            4 GTALRP---AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP---AMHVAHRSHVINMLDGDALRRVVELE---   73 (391)
T ss_dssp             CCTTST---TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG---GGGGSSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCC---CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCc---hhhhccceEECCCCCHHHHHHHHHHc---
Confidence            345543   3478999987 4799999999999999999887654221   11112345677888887777766532   


Q ss_pred             cCCccEEEECC
Q 023708           87 KGQLDIMFNNA   97 (278)
Q Consensus        87 ~g~id~li~na   97 (278)
                        ++|.++...
T Consensus        74 --~~d~v~~~~   82 (391)
T 1kjq_A           74 --KPHYIVPEI   82 (391)
T ss_dssp             --CCSEEEECS
T ss_pred             --CCCEEEECC
Confidence              699998754

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.08  E-value=0.11  Score=41.44  Aligned_cols=75  Identities=15%  Similarity=0.147  Sum_probs=50.0

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .+..+++.|.| .|.+|.+++..|++.|++|++.+|+++    ..+  +..++-.-+. ..+++++++++..... =.++
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~----~~~--~aD~vi~av~-~~~~~~v~~~l~~~~~-~~~v   86 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ----ATT--LGEIVIMAVP-YPALAALAKQYATQLK-GKIV   86 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC----CSS--CCSEEEECSC-HHHHHHHHHHTHHHHT-TSEE
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH----Hhc--cCCEEEEcCC-cHHHHHHHHHHHHhcC-CCEE
Confidence            46677899999 799999999999999999999998765    111  2334444444 6678888887765443 2345


Q ss_pred             EECC
Q 023708           94 FNNA   97 (278)
Q Consensus        94 i~na   97 (278)
                      |+.+
T Consensus        87 i~~~   90 (209)
T 2raf_A           87 VDIT   90 (209)
T ss_dssp             EECC
T ss_pred             EEEC
Confidence            5544

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=95.07  E-value=0.079  Score=43.31  Aligned_cols=44  Identities=16%  Similarity=0.163  Sum_probs=36.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC----eEEEEecchHHHHHHHhhhC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA----HIVIADILDELGAALASTIG   62 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~----~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      +++.|.| .|.+|.++++.|.+.|+    +|++.+|++++.+.+.+..+
T Consensus         3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g   50 (247)
T 3gt0_A            3 KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG   50 (247)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC
Confidence            3466776 78999999999999998    99999999888877765544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.07  E-value=0.016  Score=55.93  Aligned_cols=76  Identities=17%  Similarity=0.227  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~l   93 (278)
                      .|.+|||.||+||+|.+.++-....|++|+++++.++ .+.+ + ++... ..|-.+.+    +.+++.+..+  ++|++
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l-~-lga~~-v~~~~~~~----~~~~i~~~t~g~GvDvV  416 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAV-E-LSREH-LASSRTCD----FEQQFLGATGGRGVDVV  416 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGS-C-SCGGG-EECSSSST----HHHHHHHHSCSSCCSEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhh-h-cChhh-eeecCChh----HHHHHHHHcCCCCeEEE
Confidence            5789999999999999988888888999999887652 2111 1 22211 12434433    2233333332  59999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      +++.|.
T Consensus       417 ld~~gg  422 (795)
T 3slk_A          417 LNSLAG  422 (795)
T ss_dssp             EECCCT
T ss_pred             EECCCc
Confidence            998763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.05  E-value=0.36  Score=41.29  Aligned_cols=142  Identities=15%  Similarity=0.154  Sum_probs=80.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh-CC------eEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI-GG------RYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~-~~------~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +..++.|+|| |.+|..++..|+..+.  .+++.++++++.+....++ ..      .-+..|  +.+           .
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~--~~~-----------a   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSA--EYS-----------D   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC--CGG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEEC--CHH-----------H
Confidence            3467999999 9999999999998885  7999999877665433322 11      011222  111           1


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc--------CCC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM--------GGL  158 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--------~~~  158 (278)
                      +...|++|..+|.....    ..+.+   +.+..|+.-...+    .+.+.+...++.++++|-.....        ++|
T Consensus        74 ~~~aDvVii~ag~~~k~----g~~R~---dl~~~n~~i~~~i----~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p  142 (326)
T 2zqz_A           74 AKDADLVVITAGAPQKP----GETRL---DLVNKNLKILKSI----VDPIVDSGFNGIFLVAANPVDILTYATWKLSGFP  142 (326)
T ss_dssp             GGGCSEEEECCCCC---------CHH---HHHHHHHHHHHHH----HHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCC
Confidence            23699999999864221    12222   3445555444444    44444323367888876655431        233


Q ss_pred             CCchhhh-hHHHHHHHHHHHHHHHC
Q 023708          159 ASHAYSL-SKEAIIGLARSTACELG  182 (278)
Q Consensus       159 ~~~~Y~~-sK~a~~~l~~~l~~e~~  182 (278)
                      .....|. +-.=...+-..++..+.
T Consensus       143 ~~rviG~gt~LD~~R~~~~la~~lg  167 (326)
T 2zqz_A          143 KNRVVGSGTSLDTARFRQSIAEMVN  167 (326)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHEEEccccchHHHHHHHHHHHhC
Confidence            3334444 33334455556666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	278
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-73
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	6e-69
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-66
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-64
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-63
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-63
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-62
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	9e-62
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-60
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-60
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	7e-60
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-59
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-58
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-58
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-58
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-57
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-57
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-57
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-57
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-57
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-56
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-56
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	5e-56
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	6e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-56
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-55
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-55
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-55
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-55
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-55
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-55
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-55
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-54
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-54
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-54
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-54
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-53
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-51
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-50
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-49
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-48
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-47
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-47
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-46
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-45
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-44
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-44
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-42
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-41
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-40
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-40
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-38
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-38
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-38
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-36
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	5e-36
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-34
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-33
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	9e-31
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-30
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-30
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-25
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	7e-24
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-23
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-19
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-14
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-12
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	5e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	5e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.004
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.004
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.004

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  222 bits (567), Expect = 3e-73
 Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 10/254 (3%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
              GK  ++TGGARGIG A A+ FA  GA + + D+    G  +A  IGG +   D+  E
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIGGAFFQVDLEDE 60

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
            +    V  A    G++D++ NNA I+   GS  ++ + + + +L VNL   +H    AA
Sbjct: 61  RERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAA 119

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           + M +    G+I+  +S   +     + AY+ SK  ++ L RS A +L    IRVN ++P
Sbjct: 120 REMRK-VGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP 178

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             + +E ++ A           PE   +   D  +L   R    E+VA+A LFLASE+A 
Sbjct: 179 GAIATEAVLEAI-----ALSPDPERTRRDWEDLHAL--RRLGKPEEVAEAVLFLASEKAS 231

Query: 254 FITAHNLVIDGGYT 267
           FIT   L +DGG T
Sbjct: 232 FITGAILPVDGGMT 245

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  211 bits (539), Expect = 6e-69
 Identities = 82/257 (31%), Positives = 126/257 (49%), Gaps = 11/257 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
           R  GKV V+TGG RGIGA   + F  +GA +VI D  +  G AL   + G  +I CDVT+
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQ 62

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E+DV++ V   +   G+LD + NNAG           + +  + LL +NL G     K A
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              + +   +G++I  SS    +G   +  Y  +K A+  + ++ A +   +G+RVNCIS
Sbjct: 123 LPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS 180

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + + +           A + P+    +     +   GR     +V  AA+FLAS EA
Sbjct: 181 PGNIWTPLWEEL-------AALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EA 232

Query: 253 GFITAHNLVIDGGYTTG 269
            F T   L++ GG   G
Sbjct: 233 NFCTGIELLVTGGAELG 249

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  203 bits (519), Expect = 7e-66
 Identities = 87/257 (33%), Positives = 119/257 (46%), Gaps = 16/257 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGR--YIHCDV 70
           RL  K+AVITGGA GIG A A+ FA  GA I IAD++      A    +G R   + CDV
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV 61

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           ++  DVE+  +  +S  G+ DI+ NNAGI         L  E  K    +N++      K
Sbjct: 62  SQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 131 HAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
                M      G II  +S+   +   A   Y  +K A IG  R+ A +LGK GI VN 
Sbjct: 121 AFVPGMKR-NGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           I+P  V +     +        D+ P  +  +          R     D+  AA FLAS+
Sbjct: 180 IAPSLVRTATTEASALS--AMFDVLPNMLQAI---------PRLQVPLDLTGAAAFLASD 228

Query: 251 EAGFITAHNLVIDGGYT 267
           +A FIT   L +DGG  
Sbjct: 229 DASFITGQTLAVDGGMV 245

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  200 bits (509), Expect = 3e-64
 Identities = 109/260 (41%), Positives = 152/260 (58%), Gaps = 15/260 (5%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYIHCD 69
           RL  KVA+ITGGA GIG  TAKLF   GA +VIADI D+ G  + + IG      ++HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGILHG 128
           VTK+EDV + V   ++  G+LDIMF N G+  +   SI     ED K ++ +N+ G    
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIR 187
            KHAA+ MI   +KGSI+ T+S ++   G      Y+ +K A++GL  S   ELG++GIR
Sbjct: 123 AKHAARVMIP-AKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VNC+SP+ V S +L        G    + EE+        + L+G     EDVA A  +L
Sbjct: 182 VNCVSPYIVASPLL----TDVFGVDSSRVEELAHQA----ANLKGTLLRAEDVADAVAYL 233

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           A +E+ +++  NLVIDGGYT
Sbjct: 234 AGDESKYVSGLNLVIDGGYT 253

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  197 bits (503), Expect = 2e-63
 Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 16/257 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTK 72
           L+GK  +ITGGARG+GA  A+     GA +V+AD+LDE GAA A  +G    Y H DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           EED +  V  A    G +D + NNAGIS  G  + + ++E  + ++ +NL G+  G+K  
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTV 121

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
             AM +    GSI+  SS+A +MG   + +Y  SK  + GL++  A ELG   IRVN + 
Sbjct: 122 IPAMKD-AGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P    + M           A+    +      +  + +        ++A A + L S+ +
Sbjct: 181 PGMTYTPMT----------AETGIRQGEGNYPN--TPMGRVGNEPGEIAGAVVKLLSDTS 228

Query: 253 GFITAHNLVIDGGYTTG 269
            ++T   L +DGG+TTG
Sbjct: 229 SYVTGAELAVDGGWTTG 245

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  196 bits (499), Expect = 6e-63
 Identities = 85/259 (32%), Positives = 124/259 (47%), Gaps = 17/259 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
           RL GKVA++TGGA G+G    KL    GA +  +DI +  G  LA+ +G R  ++  DV+
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS 62

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            E D    +       G L+++ NNAGI    G + +  +ED   LL +N   +  G + 
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQ 121

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG--IRVN 189
              AM E    GSII  +S ++ +       YS SK A+  L R+ A    K G  IRVN
Sbjct: 122 GIAAMKE--TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR-GRSASIEDVAQAALFLA 248
            I P G+ + M+         +A +      +MV     L R GR+   E +AQ  LFLA
Sbjct: 180 SIHPDGIYTPMM---------QASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S+E+  ++   L  D    
Sbjct: 231 SDESSVMSGSELHADNSIL 249

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  194 bits (495), Expect = 3e-62
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 17/266 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI--------LDELGAALASTIGGRY 65
           R   KVA+ITG + GIG ATA LFA  GA + I             ++ AA  S      
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG---SITSLNMEDVKFLLSVNL 122
           +  DVT +   +  +   +   G+LDI+ NNAG +       + T+ ++E     L++NL
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
             ++   K A   +   + +   I  S ++ +        YS++K AI    R+TA +L 
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNIS-SIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 180

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           +HGIRVN ISP  V +              +   +    M      +  G     +D+A+
Sbjct: 181 QHGIRVNSISPGLVATGFG----SAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 236

Query: 243 AALFLASEE-AGFITAHNLVIDGGYT 267
              FLA  + + +I  H LV+DGG +
Sbjct: 237 VIAFLADRKTSSYIIGHQLVVDGGSS 262

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  193 bits (491), Expect = 9e-62
 Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 19/262 (7%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYIH 67
           S RL GKVA+ITGG  GIG A A  F E GA ++I     ++G   A ++G     ++  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D + E+             G +  + NNAGI+ +  S+      + + LL+VNL+G+  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLAVNLDGVFF 119

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA--CELGKHG 185
           G +   + M       SII  SS    +G  +  AY+ SK A+  +++S A  C L  + 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN + P  + + ++           D+   E     R    +  G      D+A   +
Sbjct: 180 VRVNTVHPGYIKTPLV----------DDLPGAEEAMSQRTKTPM--GHIGEPNDIAYICV 227

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           +LAS E+ F T    V+DGGYT
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  190 bits (483), Expect = 1e-60
 Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 17/255 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
             +G  A++TG  +GIG  T K    +GA +V     +    +LA    G   +  D+  
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            +  E A+       G +D++ NNA +         +  E      SVNL  +    +  
Sbjct: 62  WDATEKAL----GGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 116

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+ MI     GSI+  SS  A +       YS +K A+  L ++ A ELG H IRVN ++
Sbjct: 117 ARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVN 176

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V ++M         GK      E  + +++   L   + A +EDV  + LFL S+ +
Sbjct: 177 PTVVLTDM---------GKKVSADPEFARKLKERHPL--RKFAEVEDVVNSILFLLSDRS 225

Query: 253 GFITAHNLVIDGGYT 267
              +   +++D GY 
Sbjct: 226 ASTSGGGILVDAGYL 240

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  189 bits (481), Expect = 2e-60
 Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 16/256 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
           RL  K  +ITG A GIG AT +LFA+ GA +V  DI +      A  +G   +  DV   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADP 61

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
             VE     A++  G+LD + + AGI+        + +ED + +L VNL G     K A+
Sbjct: 62  ASVERGFAEALAHLGRLDGVVHYAGITRD-NFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
           +AM   ++    I  ++S   +G L    Y+ S   ++GL R+ A ELG+ GIRVN ++P
Sbjct: 121 EAMR--EKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAP 178

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             + + M               PE+V +    +  L  GR+    +VA AALFL S+E+ 
Sbjct: 179 GFIETRMTAKV-----------PEKVREKAIAATPL--GRAGKPLEVAYAALFLLSDESS 225

Query: 254 FITAHNLVIDGGYTTG 269
           FIT   L +DGG T G
Sbjct: 226 FITGQVLFVDGGRTIG 241

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  189 bits (481), Expect = 7e-60
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
           +L G+  +ITGGA G+G A    F   GA + + D   E  A L +  G     I  DV 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVR 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKF----LLSVNLNGILH 127
             ED + A    V+  G++D +  NAGI     ++  L  E +      +  +N+ G +H
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            +K    A++    +G++I T S+A          Y+ +K AI+GL R  A EL    +R
Sbjct: 122 AVKACLPALVA--SRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVR 178

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +   G+ S++   +    +G   +    +  M++    +  GR   +E+   A +F 
Sbjct: 179 VNGVGSGGINSDLRGPSSLG-MGSKAISTVPLADMLKSVLPI--GRMPEVEEYTGAYVFF 235

Query: 248 ASE-EAGFITAHNLVIDGGYT 267
           A+  +A   T   L  DGG  
Sbjct: 236 ATRGDAAPATGALLNYDGGLG 256

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  187 bits (475), Expect = 3e-59
 Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 16/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIHCD 69
           L G  A++TGG+RGIG    +  A  GA +       +      +             CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 70  VTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           ++   + +  +    + + G+L+I+ NNAGI           +ED   ++S+N     H 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
              A   +   +R  +++  SS +  +       Y  +K A+  L R  A E  K  IRV
Sbjct: 125 SVLAHPFLKASERG-NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N + P  + + ++           D + +E    + D  +L   R    +++A    FL 
Sbjct: 184 NGVGPGVIATSLVEMTI------QDPEQKENLNKLIDRCAL--RRMGEPKELAAMVAFLC 235

Query: 249 SEEAGFITAHNLVIDGGYT 267
              A ++T   + +DGG  
Sbjct: 236 FPAASYVTGQIIYVDGGLM 254

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  185 bits (472), Expect = 1e-58
 Identities = 74/264 (28%), Positives = 110/264 (41%), Gaps = 22/264 (8%)

Query: 12  SKR--LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR----- 64
           S+R  L  K  ++TGG +GIG A  + FA  GA I      +       S    +     
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60

Query: 65  YIHCDVTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
              CD +   + E  ++   S + G+LDI+ NN G             ED  F +S NL 
Sbjct: 61  GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLE 119

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
              H  + A   +      G+II  SS A ++       YS +K A+  LAR+ ACE   
Sbjct: 120 SAYHLSQLAHPLLKA-SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWAS 178

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            GIR N ++P  + + +             +  +E  K+V     L  GR    E+V+  
Sbjct: 179 DGIRANAVAPAVIATPLA----------EAVYDDEFKKVVISRKPL--GRFGEPEEVSSL 226

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
             FL    A +IT   + +DGG T
Sbjct: 227 VAFLCMPAASYITGQTICVDGGLT 250

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  184 bits (469), Expect = 5e-58
 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 19/267 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--------RY 65
           R + K  +ITG + GIG  TA LFA+ GA++ I     E        I            
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG---SITSLNMEDVKFLLSVNL 122
           +  DVT E+  +  +   +   G++D++ NNAG +       + T   ++     L +NL
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 123 NGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG 182
             ++   K      +   +   +  +S  A          Y+++K A+    RSTA +L 
Sbjct: 122 QAVIEMTKKVKP-HLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 180

Query: 183 KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIEDVA 241
           K GIRVN +SP  V +          +G  D   ++    +      +  G +   E +A
Sbjct: 181 KFGIRVNSVSPGMVETGFT-----NAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA 235

Query: 242 QAALFLASEEA-GFITAHNLVIDGGYT 267
              LFLA      +I   ++V DGG +
Sbjct: 236 NIILFLADRNLSFYILGQSIVADGGTS 262

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  183 bits (466), Expect = 5e-58
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 7/248 (2%)

Query: 20  AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESA 79
           A++T      G  +A   +E G  +   D   +    L +     Y       E++    
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPMSEQEPAEL 61

Query: 80  VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG 139
           +    S  GQ+D++ +N   +     I    +ED +  +          +   A  M + 
Sbjct: 62  IEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK- 120

Query: 140 QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE 199
           ++ G II  +S+           Y+ ++     LA + + ELG++ I V  I P+ + SE
Sbjct: 121 RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 180

Query: 200 MLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHN 259
                Y     K +    E    V+   +L   R  + +++ +   FLAS    ++T   
Sbjct: 181 DSPYFYPTEPWKTN---PEHVAHVKKVTAL--QRLGTQKELGELVAFLASGSCDYLTGQV 235

Query: 260 LVIDGGYT 267
             + GG+ 
Sbjct: 236 FWLAGGFP 243

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 2e-57
 Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 22/275 (8%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI--------LDELGAALASTI 61
           L+   L G+VA++TGGA GIG A  K   E G+++VIA           DEL A L  T 
Sbjct: 5   LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

Query: 62  GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
             R   I C++  EE+V + V+  +   G+++ + NN G          ++ +    +L 
Sbjct: 65  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-QFLSPAEHISSKGWHAVLE 123

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTAC 179
            NL G  +  K    + ++      +     + A            ++  +  L +S A 
Sbjct: 124 TNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA--ARAGVYNLTKSLAL 181

Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           E    GIR+NC++P  + S+  V  Y           +   +           R    E+
Sbjct: 182 EWACSGIRINCVAPGVIYSQTAVENY-------GSWGQSFFEGSFQKIPA--KRIGVPEE 232

Query: 240 VAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMS 274
           V+    FL S  A FIT  ++ +DGG +  T S  
Sbjct: 233 VSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE 267

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  182 bits (463), Expect = 2e-57
 Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 15/263 (5%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGR--Y 65
           SK L GKVA+ TG  RGIG   A      GA +V+        A    A    +G +   
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           I  D++K  +V +    AVS  G LD + +N+G+         +  E    + ++N  G 
Sbjct: 61  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQ 119

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY-SLSKEAIIGLARSTACELGKH 184
               +   K     +R G II TSS AA+M G+ +HA  + SK A+ G  R+ A + G  
Sbjct: 120 FFVAQQGLKHC---RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 176

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKAD--MKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           G+ VNCI+P GV ++M       Y       M  E++ + + +   L   R     D+ +
Sbjct: 177 GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL--KRIGYPADIGR 234

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
           A   L  EE+ +I    + + GG
Sbjct: 235 AVSALCQEESEWINGQVIKLTGG 257

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  182 bits (463), Expect = 2e-57
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 13/263 (4%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIH 67
           K+  GKV ++TG    IG ATA   AE G  I + D+  E      +++       R   
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CDVT EE V   V   V   G++D +FNNAG  G+   +     +D   +L++N+ G  H
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            +K  ++ MI  Q  G I+ T+S A + G     AY  SK AII L  + A +L  + IR
Sbjct: 121 VLKAVSRQMIT-QNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIR 179

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMK-----PEEVCKMVRDSGSLLRGRSASIEDVAQ 242
           VN ISP  +    +     +   K   +     P+ V + +  S  +   R   I ++  
Sbjct: 180 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--RRYGDINEIPG 237

Query: 243 AALFLASEEAGFITAHNLVIDGG 265
              FL  +++ F+T  NL I GG
Sbjct: 238 VVAFLLGDDSSFMTGVNLPIAGG 260

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 3e-57
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 17/255 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTK 72
            L G+  ++TG  +GIG  T +     GA +V          +L     G   +  D+  
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGD 63

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            E  E A+       G +D++ NNA +         +  E       VNL  ++   +  
Sbjct: 64  WEATERAL----GSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
           A+ +I     G+I+  SS  +         Y  +K A+  L +  A ELG H IRVN ++
Sbjct: 119 ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN 178

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V + M                 +  K       +  G+ A +E V  A LFL S+ +
Sbjct: 179 PTVVMTSM-----------GQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

Query: 253 GFITAHNLVIDGGYT 267
           G  T   L ++GG+ 
Sbjct: 228 GMTTGSTLPVEGGFW 242

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (459), Expect = 7e-57
 Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 26/265 (9%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-------Y 65
           +R   ++A++TG + GIGAA A+   + G  +V           LA+             
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
             CD++ EED+ S      S    +DI  NNAG+     ++ S +    K + +VN+  +
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLAL 124

Query: 126 LHGIKHAAKAMIE-GQRKGSIICTSSSAA--IMGGLASHAYSLSKEAIIGLARSTACEL- 181
               + A ++M E     G II  +S +   ++    +H YS +K A+  L      EL 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 182 -GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
             +  IR  CISP  V ++     +       D  PE+            + +    EDV
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKLH-------DKDPEKAAATYE------QMKCLKPEDV 231

Query: 241 AQAALFLASEEAGFITAHNLVIDGG 265
           A+A +++ S  A        +   G
Sbjct: 232 AEAVIYVLSTPAHIQIGDIQMRPTG 256

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  180 bits (458), Expect = 8e-57
 Identities = 101/262 (38%), Positives = 145/262 (55%), Gaps = 22/262 (8%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCD 69
           S RLTGKVA+++GGARG+GA+  +     GA +V  DILDE G A+A+ +    RY+H D
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD 60

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           VT+    ++AV  AV+  G L ++ NNAGI    G+I    + + + +L VNL G+  GI
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 130 KHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
           +   K M E  R  SII  SS   + G +A H Y+ +K A+ GL +STA ELG  GIRVN
Sbjct: 120 RAVVKPMKEAGRG-SIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            I P  V + M            D  PE++ +          GR+A   +V+   ++LAS
Sbjct: 179 SIHPGLVKTPM-----------TDWVPEDIFQT-------ALGRAAEPVEVSNLVVYLAS 220

Query: 250 EEAGFITAHNLVIDGGYTTGTS 271
           +E+ + T    V+DGG   G +
Sbjct: 221 DESSYSTGAEFVVDGGTVAGLA 242

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  180 bits (457), Expect = 1e-56
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 20/259 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIHC 68
               KVA++TG  RGIG   AK+ A++ +H++      +   ++   I            
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV+K+E++   +   ++    +DI+ NNAGI+     +     ++ + +L  NLN + + 
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRM-KNDEWEDVLRTNLNSLFYI 125

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +  +K MI   R G II  SS   + G +    YS SK  +IG  +S A EL    I V
Sbjct: 126 TQPISKRMIN-NRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P  + S+M            D   E++ K +  +     GR  + E+VA  A FL+
Sbjct: 185 NAIAPGFISSDM-----------TDKISEQIKKNIISNIPA--GRMGTPEEVANLACFLS 231

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S+++G+I     VIDGG +
Sbjct: 232 SDKSGYINGRVFVIDGGLS 250

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  180 bits (457), Expect = 2e-56
 Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 27/267 (10%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YIH 67
               K  ++TGG RGIG A  +  A  GA++ +         E+   +    G +     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
           CDV+  + V   ++   +  G +  +  NAG+       T L  ED  F+  VN+ G+ +
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 128 GIKHAAKAMIEGQRKGSIICTS-------SSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
             +  AK  ++ Q+KGSI+ TS       + +++ G L    Y+ SK A   L +  A E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
               GIRVN +SP  V ++                 +++      +  L   R A  E++
Sbjct: 185 WASAGIRVNALSPGYVNTDQT-----------AHMDKKIRDHQASNIPL--NRFAQPEEM 231

Query: 241 AQAALFLASEEAGFITAHNLVIDGGYT 267
              A+ L S+ A ++T     IDGG  
Sbjct: 232 TGQAILLLSDHATYMTGGEYFIDGGQL 258

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  178 bits (453), Expect = 5e-56
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 18/259 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR--YIHC 68
           L G+VA++TGG+RG+G   A+  AE G  +V+A        E    L    G       C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           DV+  E+V+  +       G+LD + N AGI           +++ + ++ VNL G  + 
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            + A   + E      I   S +   +      AY+ SK  +  L ++ A E G++GIRV
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P    ++M          +A     E    +     L  GR+   ED+   A+FLA
Sbjct: 182 NVIAPGWYRTKMT---------EAVFSDPEKLDYMLKRIPL--GRTGVPEDLKGVAVFLA 230

Query: 249 SEEAGFITAHNLVIDGGYT 267
           SEEA ++T   + +DGG+T
Sbjct: 231 SEEAKYVTGQIIFVDGGWT 249

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  179 bits (455), Expect = 6e-56
 Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 17/265 (6%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--------RY 65
           R +GK  +ITG + GIG + A +FA+ GA + I    ++        I            
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGG-SITSLNMEDVKFLLSVNLNG 124
           +  DVT+    +  +   ++  G++DI+ NNAG + + G + T   +E  +    +N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           ++   +   + +I+ + +   + +  +           Y+ +K A+    R TA +L +H
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP-YYACAKAALDQYTRCTAIDLIQH 179

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIEDVAQA 243
           G+RVN +SP  V +  +       +G  +   +++   +      +  G     E++A  
Sbjct: 180 GVRVNSVSPGAVATGFM-----GAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANI 234

Query: 244 ALFLASE-EAGFITAHNLVIDGGYT 267
            +FLA    + +I   ++V DGG T
Sbjct: 235 IVFLADRNLSSYIIGQSIVADGGST 259

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  179 bits (456), Expect = 7e-56
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 17/264 (6%)

Query: 10  LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI----LDELGAALASTIGGR- 64
           L      GKVA ITGG  G+G     L +  GA  VIA      L      ++S  G + 
Sbjct: 18  LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKV 77

Query: 65  -YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
             I CDV   + V++ V   +   G  +I+ NNA           L+    K +  + LN
Sbjct: 78  HAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLN 136

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
           G         K +I+ Q+  + +  ++  A  G       + +K  +  +++S A E GK
Sbjct: 137 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGK 196

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           +G+R N I P  + ++         L       +E+   +        GR  ++E++A  
Sbjct: 197 YGMRFNVIQPGPIKTKG----AFSRLDPTGTFEKEMIGRI------PCGRLGTVEELANL 246

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A FL S+ A +I    +  DGG  
Sbjct: 247 AAFLCSDYASWINGAVIKFDGGEE 270

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (455), Expect = 1e-55
 Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 37/268 (13%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA---------ALASTI 61
           S  R  G+V ++TG   G+G A A  FAE GA +V+ D+  +             +   I
Sbjct: 1   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI 60

Query: 62  GGR--YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS 119
             R      +    E  E  V+ A+   G++D++ NNAGI     S + ++ ED   +  
Sbjct: 61  RRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQR 119

Query: 120 VNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTAC 179
           V+L G     + A   M + Q  G II T+S++ I G      YS +K  ++GLA +   
Sbjct: 120 VHLRGSFQVTRAAWDHMKK-QNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 178

Query: 180 ELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED 239
           E  K+ I  N I+P+                   + PE++              +   E 
Sbjct: 179 EGRKNNIHCNTIAPNAGSRMT-----------ETVMPEDL------------VEALKPEY 215

Query: 240 VAQAALFLASEEAGFITAHNLVIDGGYT 267
           VA   L+L  E           +  G+ 
Sbjct: 216 VAPLVLWLCHESC-EENGGLFEVGAGWI 242

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 2e-55
 Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 12/254 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKE 73
           RL GKV ++T  A+GIG A A  FA  GA ++  DI +     L    G +    DVTK+
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK 62

Query: 74  EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAA 133
           + ++           +LD++FN AG     G++     +D  F +++N+  +   IK   
Sbjct: 63  KQIDQFAN----EVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117

Query: 134 KAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISP 193
             M+  +    I  +S ++++ G +    YS +K A+IGL +S A +  + GIR NC+ P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG 253
             V +  L    +   G  +    +  K  +       GR A+ E++A   ++LAS+E+ 
Sbjct: 178 GTVDTPSLQERIQAR-GNPEEARNDFLKRQK------TGRFATAEEIAMLCVYLASDESA 230

Query: 254 FITAHNLVIDGGYT 267
           ++T + ++IDGG++
Sbjct: 231 YVTGNPVIIDGGWS 244

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  177 bits (449), Expect = 3e-55
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 11/264 (4%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGG-R 64
            S  L GKVA++TG  RGIG   A      G  +++         +E+ AA+        
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 71

Query: 65  YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG 124
            +  +V   ED+      AV   G+LDI+ +N+G+  S G +  +  E+   + ++N  G
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 130

Query: 125 ILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY-SLSKEAIIGLARSTACELGK 183
                + A K +   +  G +I   S       +  HA  S SK AI   AR  A ++  
Sbjct: 131 QFFVAREAYKHL---EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMAD 187

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
             I VN ++P G+ ++M     R+Y+   +    E              R     D+A+ 
Sbjct: 188 KKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
             FLAS + G++T   + IDGG  
Sbjct: 248 VCFLASNDGGWVTGKVIGIDGGAC 271

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  176 bits (446), Expect = 4e-55
 Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 20/256 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
           RL+GK  ++TG A GIG A   LFA  GA +V  D  + L A   + +      +  DV+
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             + VE+    A+   G+L  + + AG++ S     +L +E  + +L VNL G     + 
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFLVARK 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A + + EG           S A +G      Y+  K  ++GLAR+ A EL + G+RVN +
Sbjct: 121 AGEVLEEGGSLVLT----GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
            P  + + M           A + P    + V   G+   GR+   E+VAQAALFL SEE
Sbjct: 177 LPGLIQTPMT----------AGLPPWAWEQEV---GASPLGRAGRPEEVAQAALFLLSEE 223

Query: 252 AGFITAHNLVIDGGYT 267
           + +IT   L +DGG +
Sbjct: 224 SAYITGQALYVDGGRS 239

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 4e-55
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 27/262 (10%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-------YIHCD 69
           GKVA++TG A+GIG A A+     GA + + D   E G    + +  +       +I CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 70  VTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGI 129
           V  ++ +    R  V   G+LDI+ NNAG++         N ++ +  L +NL  ++ G 
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGT 113

Query: 130 KHAAKAMIE--GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARST--ACELGKHG 185
                 M +  G   G II  SS A +M       Y  SK  I+G  RS   A  L   G
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +R+N I P  V + +L +  ++      ++ ++          +          +A   +
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKD-----HIKDMIKYYGILDPPLIANGLI 228

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
            L  ++A  +    + I     
Sbjct: 229 TLIEDDA--LNGAIMKITTSKG 248

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  176 bits (447), Expect = 5e-55
 Identities = 89/256 (34%), Positives = 125/256 (48%), Gaps = 5/256 (1%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVT 71
           RL GK A+ITG ARGIG A A+ +   GA + IADI  E   A A+ IG     I  DVT
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
            +  ++  V   +   G +DI+ NNA +      I  +  E    L ++N++G L  ++ 
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQA 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
            A+AMI G R G II  +S A   G      Y  +K A+I L +S    L +HGI VN I
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 180

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE 251
           +P  V  E       K+    ++   E  + V  +     GR    ED+   A+FLA+ E
Sbjct: 181 APGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF--GRMGRAEDLTGMAIFLATPE 238

Query: 252 AGFITAHNLVIDGGYT 267
           A +I A    +DGG  
Sbjct: 239 ADYIVAQTYNVDGGNW 254

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  176 bits (447), Expect = 5e-55
 Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 9/258 (3%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIHCDVT 71
            +VA++TG   GIG   A+   + G  + +    +E        +           CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
              ++E+ V   V   G +D++ NNAG    GG+   L  E    ++  NL G+    K 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLARSTACELGKHGIRVNC 190
             KA    +R    I   +S     G+     YS SK  ++G  ++   EL + GI VN 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           + P  V + M  +    Y    ++  EE    +     +  GR     +VA+   +L   
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI--GRYVQPSEVAEMVAYLIGP 238

Query: 251 EAGFITAHNLVIDGGYTT 268
            A  +TA  L + GG   
Sbjct: 239 GAAAVTAQALNVCGGLGN 256

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  173 bits (440), Expect = 5e-54
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-------YI 66
           R T +V +ITGG  G+G ATA   A  GA + + D+  E   A  + +            
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV+ E  VE+ V       G++D  FNNAGI G      S    +   ++S+NL G+ 
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
            G++   K M E Q  G ++ T+S   I G      Y+ +K  ++GL R++A E G++GI
Sbjct: 121 LGLEKVLKIMRE-QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           R+N I+P  + + M+ N+ ++        P +  +           R     ++A    F
Sbjct: 180 RINAIAPGAIWTPMVENSMKQL---DPENPRKAAEEFIQVNPS--KRYGEAPEIAAVVAF 234

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           L S++A ++ A  + IDGG +
Sbjct: 235 LLSDDASYVNATVVPIDGGQS 255

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  173 bits (440), Expect = 5e-54
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHC 68
           RL GK A+ITG   GIG   A  FA  GA +V++DI  +    +   I   GG+     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           D+T E+++ +    A+S  G++DI+ NNAG  G       + M D +    +N+    H 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPK--PFDMPMADFRRAYELNVFSFFHL 125

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +  A  M +      +  TS +A         +Y+ SK A   L R+ A +LG+  IRV
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNI-NMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N I+P  + ++ L            +   E+ + +     +   R    +D+A AALFL 
Sbjct: 185 NGIAPGAILTDAL----------KSVITPEIEQKMLQHTPI--RRLGQPQDIANAALFLC 232

Query: 249 SEEAGFITAHNLVIDGGYT 267
           S  A +++   L + GG  
Sbjct: 233 SPAASWVSGQILTVSGGGV 251

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  173 bits (439), Expect = 8e-54
 Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 10/260 (3%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGGR--YIH 67
           L GKVAV+TG   GIG   A   A  GA IV+        ++++ A LA+  G +  Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++K E V   V  AV   G++DI+ NN         I     E    +L++NL+ + H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN-AGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
           G   A   M + Q  G II  +S+  ++      AY  +K  ++G  + TA E    GI 
Sbjct: 121 GTAAALPHMKK-QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
            N I P  V + ++         K  +  E   + +         +  + E +   A+FL
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL 238

Query: 248 ASEEAGFITAHNLVIDGGYT 267
           AS+ A  IT   + +DGG+T
Sbjct: 239 ASDAAAQITGTTVSVDGGWT 258

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  173 bits (439), Expect = 9e-54
 Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 15/259 (5%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR-----YIHCD 69
           L G  A++TGG++GIG A  +  A  GA +      ++           +        CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 70  VTKEEDVESAVRLAVS-WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           +    + +  ++     + G+L+I+ NNAG+            +D   ++  N     H 
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKDYNIIMGTNFEAAYHL 122

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRV 188
            +  A  +++  + G++I  SS A      +   YS SK AI  + +S ACE  K  IRV
Sbjct: 123 SQI-AYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 189 NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA 248
           N ++P  + + ++       + K   + EE+   +  +     GR+   ++V+    FL 
Sbjct: 182 NSVAPGVILTPLV----ETAIKKNPHQKEEIDNFIVKT---PMGRAGKPQEVSALIAFLC 234

Query: 249 SEEAGFITAHNLVIDGGYT 267
              A +IT   +  DGG+T
Sbjct: 235 FPAASYITGQIIWADGGFT 253

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  171 bits (433), Expect = 4e-53
 Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 17/255 (6%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR--YIHCDVTK 72
             GK+A++TG +RGIG A A+  A  GA ++     +    A++  +G     +  +VT 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
              +ES +    +  G++DI+ NNAGI+     +     E+   ++  NL+ +    K  
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRM-KDEEWNDIIETNLSSVFRLSKAV 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            +AM++ +R G II   S    MG      Y+ +K  +IG ++S A E+   GI VN ++
Sbjct: 121 MRAMMK-KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 179

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  + ++M              +     +       +  GR    +++A A  FLAS+EA
Sbjct: 180 PGFIETDM-------------TRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226

Query: 253 GFITAHNLVIDGGYT 267
            +IT   L ++GG  
Sbjct: 227 AYITGETLHVNGGMY 241

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  167 bits (424), Expect = 1e-51
 Identities = 79/261 (30%), Positives = 119/261 (45%), Gaps = 18/261 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGR--YI 66
           K L GKV VITG + G+G + A  FA   A +V+     E  A         +GG    +
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DVT E DV + V+ A+   G+LD+M NNAG+     S   +++ D   ++  NL G  
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAF 121

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
            G + A K  +E   KG++I  SS    +       Y+ SK  +  +  + A E    GI
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

Query: 187 RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF 246
           RVN I P  + + +    +     +AD++             +  G     E++A  A +
Sbjct: 182 RVNNIGPGAINTPINAEKFADPEQRADVE-----------SMIPMGYIGEPEEIAAVAAW 230

Query: 247 LASEEAGFITAHNLVIDGGYT 267
           LAS EA ++T   L  DGG T
Sbjct: 231 LASSEASYVTGITLFADGGMT 251

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  164 bits (417), Expect = 1e-50
 Identities = 83/255 (32%), Positives = 124/255 (48%), Gaps = 8/255 (3%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---GGR--YIHCDVTK 72
           KVA++TG  +GIG A A    ++G  + IAD  D    A+AS I   GG    +  DV+ 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
            + V +AV  A    G  D++ NNAG++     I S+  E V  + ++N+ G++ GI+ A
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
            +A  +    G II   S A  +G      YS SK A+ GL ++ A +L   GI VN   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 193 PHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA 252
           P  V + M     R+    A               +L  GR +  EDVA    +LAS ++
Sbjct: 181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL--GRLSEPEDVAACVSYLASPDS 238

Query: 253 GFITAHNLVIDGGYT 267
            ++T  +L+IDGG  
Sbjct: 239 DYMTGQSLLIDGGMV 253

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  162 bits (410), Expect = 1e-49
 Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 24/253 (9%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE 74
           +  K  ++   +RGIG A A + ++ GA + I    +EL        G RY+ CD+ K+ 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDL 57

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
           D+            ++DI+  NA      G    L  ED K  +      ++  +++   
Sbjct: 58  DL------LFEKVKEVDILVLNA-GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRN-YL 109

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
             ++ +  G I+  +S + I      +  + ++ A+ G  ++ + E+  +GI VNC++P 
Sbjct: 110 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 169

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
              +E +           ++  EE  K V     +   R A  E++A    FL SE+A +
Sbjct: 170 WTETERV----------KELLSEEKKKQVESQIPM--RRMAKPEEIASVVAFLCSEKASY 217

Query: 255 ITAHNLVIDGGYT 267
           +T   +V+DGG +
Sbjct: 218 LTGQTIVVDGGLS 230

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 4e-48
 Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 16/248 (6%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-----RYIH 67
           K +TG++ +ITG   GIG  TA  FA+  + +V+ DI        A+   G         
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D +  ED+ S+ +   +  G + I+ NNAG+      + +     ++    VN+     
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK---H 184
             K    AM +    G I+  +S+A  +      AY  SK A +G  ++   EL      
Sbjct: 122 TTKAFLPAMTK-NNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           G++  C+ P+ V +  + N     LG   ++PEEV   +             +  +  + 
Sbjct: 181 GVKTTCLCPNFVNTGFIKNP-STSLGPT-LEPEEVVNRLMHG----ILTEQKMIFIPSSI 234

Query: 245 LFLASEEA 252
            FL + E 
Sbjct: 235 AFLTTLER 242

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  157 bits (398), Expect = 1e-47
 Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 32/264 (12%)

Query: 14  RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALA------STIGGRYIH 67
            LT K  +      GIG  T++   +      +     E   ALA        +   +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CDVT-KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
            DVT    + +  ++        +DI+ N AGI          +   ++  +++N  G++
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLV 112

Query: 127 HGIKHAAKAMI--EGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKH 184
           +            +G   G I    S            YS SK A++    S A      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
           G+    I+P    + ++                +V   V +   LL        +     
Sbjct: 173 GVTAYSINPGITRTPLV---------HTFNSWLDVEPRVAE---LLLSHPTQTSEQCGQN 220

Query: 245 LFLASEEAGFITAHNLVIDGGYTT 268
              A E           +D G   
Sbjct: 221 FVKAIEA--NKNGAIWKLDLGTLE 242

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  154 bits (391), Expect = 7e-47
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 22/257 (8%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA----ALASTIGGR--YIHCDVT 71
            V V+TG +RGIG A A    + G  +++        A          GG+      DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
           KE DVE+ ++ A+   G +D++ NNAGI+     I          ++ +NL G+    + 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM-KKSQWDEVIDLNLTGVFLCTQA 120

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCI 191
           A K M++ +RKG II  +S   ++G +    Y+ +K  +IG +++ A E     I VN +
Sbjct: 121 ATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 192 SPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SE 250
            P  + S+M                E++ K +  +  L  GR+   E+VA    FLA S 
Sbjct: 180 CPGFIASDMTAKLG-----------EDMEKKILGTIPL--GRTGQPENVAGLVEFLALSP 226

Query: 251 EAGFITAHNLVIDGGYT 267
            A +IT     IDGG  
Sbjct: 227 AASYITGQAFTIDGGIA 243

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  154 bits (389), Expect = 1e-46
 Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 23/256 (8%)

Query: 11  SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV 70
           +      +  ++TGG RGIG A A+  A +G  + +          L        +  DV
Sbjct: 1   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------GVEVDV 54

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIK 130
           T  + V+ A       +G ++++ +NAG+S        + M + KF   +N N       
Sbjct: 55  TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA---FLMRMTEEKFEKVINANLTGAFRV 111

Query: 131 HAAKAMIEGQRK-GSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVN 189
               +    + K G +I   S + + G      Y+ SK  +IG+ARS A EL K  +  N
Sbjct: 112 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 171

Query: 190 CISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS 249
            ++P  + ++M                E + +           R  +  +VA    FLAS
Sbjct: 172 VVAPGYIDTDMT-----------RALDERIQQGALQFIPA--KRVGTPAEVAGVVSFLAS 218

Query: 250 EEAGFITAHNLVIDGG 265
           E+A +I+   + +DGG
Sbjct: 219 EDASYISGAVIPVDGG 234

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  152 bits (384), Expect = 1e-45
 Identities = 57/262 (21%), Positives = 98/262 (37%), Gaps = 23/262 (8%)

Query: 15  LTGKVAVITG--GARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGR----YIHC 68
           L+GK A++ G    R +G A A    E GA + ++   + L                   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGIS---GSGGSITSLNMEDVKFLLSVNLNGI 125
           DVT++E++++         G LD + +    +      G       +D    L V+   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
           +   + A   + EG   G I+  +  A+       +  +++K A+    R  A ELG  G
Sbjct: 126 VAVARRAEPLLREG---GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKG 182

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +RVN IS   V +    +          +             +    R+ + E+V    L
Sbjct: 183 VRVNAISAGPVRTVAARSIPGFTKMYDRVA-----------QTAPLRRNITQEEVGNLGL 231

Query: 246 FLASEEAGFITAHNLVIDGGYT 267
           FL S  A  IT   + +D GY 
Sbjct: 232 FLLSPLASGITGEVVYVDAGYH 253

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 3e-44
 Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 13/251 (5%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYI 66
           + L GK  ++TG ++GIG   A   A+ GAH+V+     E    + S           YI
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
              +      E  V  A    G LD++  N     +  ++   ++  V+  + VN    +
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT-NTSLNLFHDDIHHVRKSMEVNFLSYV 128

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KH 184
                A   +   Q  GSI+  SS A  +      AYS SK A+ G   S   E    + 
Sbjct: 129 VLTVAALPMLK--QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 186

Query: 185 GIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA 244
            + +       + +E  + A    +       EE    +   G     +     D +   
Sbjct: 187 NVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGG--ALRQEEVYYDSSLWT 244

Query: 245 LFLASEEAGFI 255
             L    +  I
Sbjct: 245 TLLIRNPSRKI 255

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (371), Expect = 7e-44
 Identities = 63/257 (24%), Positives = 99/257 (38%), Gaps = 28/257 (10%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           + A++TGGA G+G A A      G  +V+ D+  E    +        +  DVT+EEDV 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIY-------VEGDVTREEDVR 54

Query: 78  SAVRLAVS--WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
            AV  A        +             G      +E  + +L VNL G  + ++ AA A
Sbjct: 55  RAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA 114

Query: 136 MIE-----GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNC 190
           M E       ++G I+ T+S AA  G +   AY+ SK  ++ L    A EL   GIRV  
Sbjct: 115 MRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVT 174

Query: 191 ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE 250
           ++P    + +L           +     +   V         R    E+ A   L +   
Sbjct: 175 VAPGLFDTPLLQGLP-------EKAKASLAAQVP-----FPPRLGRPEEYAALVLHILE- 221

Query: 251 EAGFITAHNLVIDGGYT 267
               +    + +DG   
Sbjct: 222 -NPMLNGEVVRLDGALR 237

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  143 bits (362), Expect = 2e-42
 Identities = 65/274 (23%), Positives = 101/274 (36%), Gaps = 39/274 (14%)

Query: 19  VAVITGGARGIGAATAKLFAENGAHIVIADI-----LDELGAALASTIGGRYIHC----- 68
            AVITGGAR IG + A    + G  +V+           L A L +   G  + C     
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 69  -DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFL---------- 117
              +  +  E  +  +    G+ D++ NNA        +   +                 
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 118 LSVNLNGILHGIKHAAKAMIEG----QRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
              N    L  I+  A+   EG     R  S++    +   +       Y+++K A+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGR 233
            R+ A EL    IRVN ++P                      P+E  +  R    L +  
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPP-------------AMPQETQEEYRRKVPLGQ-S 228

Query: 234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
            AS   +A A  FL S++AG+IT   L +DGG  
Sbjct: 229 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  140 bits (354), Expect = 3e-41
 Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 24/264 (9%)

Query: 14  RLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIH 67
            L+GK  ++TG A    I    A+     GA +      D+L   +            + 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNLN 123
           CDV ++  +++          + D   ++ G +      G  + ++  E  K    ++  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
             +   K     +  G    +++  S   A       +   L+K ++    R  A  +G 
Sbjct: 122 SFVAMAKACRSMLNPGS---ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP 178

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
            G+RVN IS   + +             A  +                 R+ +IEDV  +
Sbjct: 179 EGVRVNAISAGPIRTLAASGIKDFRKMLAHCE-----------AVTPIRRTVTIEDVGNS 227

Query: 244 ALFLASEEAGFITAHNLVIDGGYT 267
           A FL S+ +  I+   + +DGG++
Sbjct: 228 AAFLCSDLSAGISGEVVHVDGGFS 251

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  139 bits (351), Expect = 1e-40
 Identities = 51/266 (19%), Positives = 94/266 (35%), Gaps = 28/266 (10%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAE---NGAHIVIADILDELGAALASTIGGR---- 64
           +  L   V V+TG +RG G A A   A     G+ ++++   + +   L   +G +    
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 65  ---YIHCDVTKEEDVESAVRLAVSWK----GQLDIMFNNAGISG--SGGSITSLNMEDVK 115
                  D+  E  V+  +            Q  ++ NNA   G  S G +   ++ +V 
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 FLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH-AYSLSKEAIIGLA 174
              ++NL  +L        A  +       +   SS   +        Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS 234
           +  A E  +  +RV   +P  + ++M   A      +   K  E+   ++   S   G  
Sbjct: 181 QVLAAE--EPSVRVLSYAPGPLDNDMQQLA------RETSKDPELRSKLQKLKSD--GAL 230

Query: 235 ASIEDVAQAALFLASEEAGFITAHNL 260
                 AQ  L L  ++  F +  ++
Sbjct: 231 VDCGTSAQKLLGLLQKDT-FQSGAHV 255

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  138 bits (349), Expect = 1e-40
 Identities = 50/251 (19%), Positives = 83/251 (33%), Gaps = 36/251 (14%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAH-------IVIADILDELGAALASTIGG-----RY 65
            + +ITG  +GIG A A  FA    H       +V++         ++            
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGI 125
           I  D++   DV       V   G +D + NN    G  G+++ L  ED  + ++ NL G 
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 126 LHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHG 185
               +     M   Q  G I   +S AA      S  Y +SK    GL  +      K  
Sbjct: 121 FFLTQALFALMER-QHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 186 IRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL 245
           +R+  + P  V + M      +                       +      ED+A   +
Sbjct: 180 VRITDVQPGAVYTPMWGKVDDEM----------------------QALMMMPEDIAAPVV 217

Query: 246 FLASEEAGFIT 256
               + +  + 
Sbjct: 218 QAYLQPSRTVV 228

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (335), Expect = 1e-38
 Identities = 38/258 (14%), Positives = 86/258 (33%), Gaps = 31/258 (12%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV 76
            +  ++ GG   +G+   + F      +   D+++   A+ +  +    +    T++ D 
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK---MTDSFTEQADQ 58

Query: 77  ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
            +A    +    ++D +   AG    G + +    ++   +   ++         A K +
Sbjct: 59  VTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 118

Query: 137 IEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELG--KHGIRVNCISPH 194
            EG     +    + AA+ G      Y ++K A+  L +S A +      G     + P 
Sbjct: 119 KEGGL---LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV 175

Query: 195 GVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF 254
            + + M     RK + +AD                       +E + +      +     
Sbjct: 176 TLDTPM----NRKSMPEADF-----------------SSWTPLEFLVETFHDWITGNKRP 214

Query: 255 IT--AHNLVIDGGYTTGT 270
            +     +V   G T  T
Sbjct: 215 NSGSLIQVVTTDGKTELT 232

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 4e-38
 Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 26/260 (10%)

Query: 13  KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC--DV 70
           + + G VAVITGGA G+G ATA+     GA  V+ D+ +  G A A  +G   +    DV
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 71  TKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGS-----ITSLNMEDVKFLLSVNLNGI 125
           T E+DV++A+ LA    G++D+  N AGI+ +  +       +  +ED + +L VNL G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 126 LHGIKHAAKAMIE-----GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACE 180
            + I+  A  M +     G ++G II T+S AA  G +   AYS SK  I+G+    A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 181 LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV 240
           L   GIRV  I+P    + +               PE+VC  +         R     + 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPL-----------LTSLPEKVCNFLASQVPFP-SRLGDPAEY 228

Query: 241 AQAALFLASEEAGFITAHNL 260
           A     +      F+    +
Sbjct: 229 AHLVQAIIE--NPFLNGEVI 246

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 4e-38
 Identities = 53/249 (21%), Positives = 91/249 (36%), Gaps = 19/249 (7%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADI----------LDELGAALASTIGG-RYI 66
            V +ITG + GIG   A   A + +                 L E   ALA   G    +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
             DV    D +S              +       G  G + +L  + V  +L VN+ G +
Sbjct: 63  QLDVR---DSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
             ++     M   +  G ++ T S   +MG   +  Y  SK A+ GL  S A  L   G+
Sbjct: 120 RMLQAFLPDMKR-RGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 187 RVNCISPHGVPSEML---VNAYRKYLGKADMKP-EEVCKMVRDSGSLLRGRSASIEDVAQ 242
            ++ I    V +  +   + +  + L + D+       + +  S  + R  + + E+VA+
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 243 AALFLASEE 251
             L      
Sbjct: 239 VFLTALRAP 247

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  128 bits (322), Expect = 1e-36
 Identities = 45/228 (19%), Positives = 78/228 (34%), Gaps = 30/228 (13%)

Query: 15  LTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGR--YIHCDV 70
           ++    V+TG  RGIG    +   ++    HI+      E    L S    R   +   V
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 71  TKEEDVESAVRLAVSWKGQ--LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
           T ++ +++ V       G   L ++ NNAG+  S G+ T  N   +   L VN   ++  
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 129 IKHAAKAMIEGQRKGSI-----------------ICTSSSAAIMGGLASHAYSLSKEAII 171
            +     +     K S                     + + +        AY +SK AI 
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV 219
              R+ A +L    + V    P  V + +           A +  E+ 
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------AALTVEQS 221

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  127 bits (319), Expect = 5e-36
 Identities = 59/286 (20%), Positives = 99/286 (34%), Gaps = 58/286 (20%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
            + VI+G A GIGAAT K+    G  IV  DI D              +  D++  E  +
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA------------EVIADLSTAEGRK 49

Query: 78  SAV-RLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
            A+  +       +D +   AG+            + +  ++SVN  G    +     A+
Sbjct: 50  QAIADVLAKCSKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPAL 101

Query: 137 IE--------------------------GQRKGSIICTSSSAAIMGGLASH-AYSLSKEA 169
            +                              G      +     G    + AY+ SK A
Sbjct: 102 KKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNA 161

Query: 170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSL 229
           +    R  A   G+ G+R+N I+P    + +L         +A ++     + +      
Sbjct: 162 LTVAVRKRAAAWGEAGVRLNTIAPGATETPLL---------QAGLQDPRYGESIAKFVPP 212

Query: 230 LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSF 275
           + GR A   ++A    FL S  A ++    +VIDGG         F
Sbjct: 213 M-GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRPTQF 257

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  122 bits (307), Expect = 4e-34
 Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 17/261 (6%)

Query: 14  RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGG----RYIH 67
            L GK  +I G A  + I    A+     GA +    + + L   +              
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            DV+KEE  +S         G LD + ++   +       SL         +     +  
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIR 187
            I+             S++  S   +       +   L+K A+    R  A +LGKH IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 188 VNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL 247
           VN +S   + +             +    +    +  +  +    ++ S+E+V  A ++L
Sbjct: 182 VNALSAGPIRTLA-----------SSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYL 230

Query: 248 ASEEAGFITAHNLVIDGGYTT 268
            S  +  ++     +D GY  
Sbjct: 231 LSSLSSGVSGEVHFVDAGYHV 251

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  121 bits (303), Expect = 1e-33
 Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 8/265 (3%)

Query: 12  SKRLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADI-LDELGAALASTIGG----- 63
           +  L GK  +++G      I    A++  E GA +V+       L   +   +       
Sbjct: 1   TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL 60

Query: 64  RYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLN 123
                +      +   V  A+    +LD + ++ G     G   +   +     +S  ++
Sbjct: 61  ELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIH 120

Query: 124 GILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK 183
              +     AKA++     G  I            A +  +++K A+  + R  A E GK
Sbjct: 121 ISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGK 180

Query: 184 HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA 243
           +G+R N ++   + +  +       LG+      ++ +   D  + +         VA+ 
Sbjct: 181 YGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKT 240

Query: 244 ALFLASEEAGFITAHNLVIDGGYTT 268
              L S+     T   +  DGG  T
Sbjct: 241 VCALLSDWLPATTGDIIYADGGAHT 265

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 9e-31
 Identities = 44/292 (15%), Positives = 84/292 (28%), Gaps = 85/292 (29%)

Query: 18  KVAVITGGARGIGAATAKLFA-ENGAHIVIADILDELGAALASTIGG-----RYIHCDVT 71
            VA++TGG +GIG A  +         +V+       G A    +       R+   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             + + +         G LD++ NNAGI     +  +      +  +  N  G       
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGI-AFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGLASHAY---------------------------- 163
               +   + +G ++  SS  ++    +                                
Sbjct: 123 LLPLI---KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 164 -------------SLSKEAIIGLARSTACELGKH----GIRVNCISPHGVPSEMLVNAYR 206
                         ++K  +  L+R  A +L +      I +N   P  V ++M      
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA--SEEAGFIT 256
           K                            S E+ A+  ++LA    +A    
Sbjct: 240 K----------------------------SPEEGAETPVYLALLPPDAEGPH 263

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  112 bits (281), Expect = 1e-30
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 33/260 (12%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEED 75
           +GKV ++ GG   +G+A  + F +NG  ++  D+     A     + G   + + T++E 
Sbjct: 2   SGKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG---NKNWTEQEQ 57

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
                  +     Q+D +F  AG    G + +   +++   ++  ++       K A   
Sbjct: 58  SILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH 117

Query: 136 MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGK--HGIRVNCISP 193
           +  G     +  T ++AA+    +   Y ++K A+  L  S A +         V  I P
Sbjct: 118 LKPGGL---LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP 174

Query: 194 HGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL-FLASEEA 252
             + + M     RK++  AD                       +  +++  L +     +
Sbjct: 175 VTLDTPM----NRKWMPNADH-----------------SSWTPLSFISEHLLKWTTETSS 213

Query: 253 GFITAHNLVI--DGGYTTGT 270
              +   L I  + G +T T
Sbjct: 214 RPSSGALLKITTENGTSTIT 233

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  113 bits (282), Expect = 2e-30
 Identities = 64/294 (21%), Positives = 96/294 (32%), Gaps = 56/294 (19%)

Query: 16  TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGA-ALASTIGGR---------- 64
           T  VA++TG A+ +G + A+     G  + +        A AL++T+  R          
Sbjct: 1   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 60

Query: 65  -------------YIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSIT---- 107
                             VT        V    +  G+ D++ NNA        +     
Sbjct: 61  DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 120

Query: 108 ---------SLNMEDVKFLLSVNLNGILHGIKHAAK-----AMIEGQRKGSIICTSSSAA 153
                             L   N       IK  A               SII    +  
Sbjct: 121 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 180

Query: 154 IMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKAD 213
               L    Y+++K A+ GL RS A EL    IRVN + P                   D
Sbjct: 181 NQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV-------------LVD 227

Query: 214 MKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 267
             P  V +  R    L   R +S  +V+   +FL S +A +IT   + +DGGY+
Sbjct: 228 DMPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 46/258 (17%), Positives = 84/258 (32%), Gaps = 46/258 (17%)

Query: 18  KVAVITGGARGIGAATAKLF---AENGAHIVIADILDELGAALASTIGG----RYIHCDV 70
              +ITG  RG+G    K      +   H+       E    L            +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 71  TKEEDVES--AVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
              +  +   A    V+    L+++FNNAGI+     IT++  +++   L  N    +  
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 129 IKHAAKAMIEGQRK----------GSIICTSSSAAIMGGLAS---HAYSLSKEAIIGLAR 175
            K     + +  +            +II  SS    + G      +AY  SK A+    +
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 176 STACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA 235
           S + +L    I    + P  V ++M  ++       A +                     
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGSS-------APLDVPT----------------- 218

Query: 236 SIEDVAQAALFLASEEAG 253
           S   + Q    L  ++ G
Sbjct: 219 STGQIVQTISKLGEKQNG 236

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 96.5 bits (238), Expect = 7e-24
 Identities = 41/325 (12%), Positives = 85/325 (26%), Gaps = 77/325 (23%)

Query: 17  GKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY--------- 65
             +  I G     G G   AK  ++    I+           + +   G++         
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 66  ----------------------------IHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA 97
                                          ++ +   +E    L     G+++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 98  GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG 157
             +        LN     +L +++ +             I   +   I  T  ++  +  
Sbjct: 122 ANAKEVQK-DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 158 LASHAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEM---------------- 200
                 S +K A+    R  A  LG+ + IR+N IS   + S                  
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 201 ------------------LVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ 242
                                  +    +     +   +       L   +     D+  
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL--RQKLLSTDIGS 298

Query: 243 AALFLASEEAGFITAHNLVIDGGYT 267
            A FL S E+  IT   + +D G  
Sbjct: 299 VASFLLSRESRAITGQTIYVDNGLN 323

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 95.6 bits (236), Expect = 1e-23
 Identities = 49/294 (16%), Positives = 82/294 (27%), Gaps = 50/294 (17%)

Query: 14  RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY------ 65
            L GK A I G A   G G A AK  A  GA I++   +  L     S   G++      
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 66  -------------------------------IHCDVTKEEDVESAVRLAVSWKGQLDIMF 94
                                               +    V+ A        G +DI+ 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 95  NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI 154
           ++                          +     +      ++        +   +S  I
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 155 MGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM 214
           + G      S                  K  IRVN IS   + S            KA  
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA---------KAIG 235

Query: 215 KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT 268
             + + +   ++  +   ++ + ++V  AA FL S  A  IT   + +D G  +
Sbjct: 236 FIDTMIEYSYNNAPI--QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS 287

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 79.9 bits (196), Expect = 8e-19
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 9/178 (5%)

Query: 9   KLSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC 68
           K +   + GK AV+  G   +G  +A L A  GA +V+     +   A A ++  R+   
Sbjct: 15  KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN 74

Query: 69  DVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHG 128
               E   +++   AV        +F    I      +  L     +   S+ +    + 
Sbjct: 75  VTAAETADDASRAEAV---KGAHFVFTAGAI-----GLELLPQAAWQNESSIEIVADYNA 126

Query: 129 IKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGI 186
                   I+   KG       +   + G+      L +  I  L  S+        I
Sbjct: 127 QPPLGIGGIDATDKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 69.3 bits (168), Expect = 2e-14
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 10/215 (4%)

Query: 17  GKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGG-RYIHCDVTKEE 74
               ++TGG  G+G   A+  A  GA H+++              +     +    T   
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 75  DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAK 134
              +         G +      + +  +  ++    ++ +        +           
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 135 AMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPH 194
            +       + +  SS A+  G      Y+     + GLA+    +    G+    ++  
Sbjct: 129 ELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQ----QRRSDGLPATAVAWG 184

Query: 195 GVPSEMLVNA----YRKYLGKADMKPEEVCKMVRD 225
                 +         +  G  +M PE  C+ +++
Sbjct: 185 TWAGSGMAEGPVADRFRRHGVIEMPPETACRALQN 219

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 62.0 bits (149), Expect = 3e-12
 Identities = 23/184 (12%), Positives = 51/184 (27%), Gaps = 8/184 (4%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIHCDVTK 72
           +VA++ GG   +G   A   A  G  IV+    +E   A A+                  
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
             +      L + W+  +D   +   I      ++   +  V                  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVS--PLVPVSRGAKGFTYSSERSAAEI 118

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCIS 192
              ++E ++  S + T  +A          + +        ++     L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 193 PHGV 196
              +
Sbjct: 179 AGPL 182

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.9 bits (121), Expect = 5e-08
 Identities = 49/265 (18%), Positives = 85/265 (32%), Gaps = 52/265 (19%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIA-DILDELG-----AALASTIGGRYIHCDVTKEED 75
           ITGGA  IG+A  +   +N    V+  D L   G     + ++ +    + H D+    +
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAE 64

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNG---ILHGIKHA 132
           +          + Q D + + A  S    SI           +  N+ G   +L   +  
Sbjct: 65  ITRIFE-----QYQPDAVMHLAAESHVDRSI-----TGPAAFIETNIVGTYALLEVARKY 114

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASH----------------------AYSLSKEAI 170
             A+ E ++        S+  + G L                          YS SK + 
Sbjct: 115 WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASS 174

Query: 171 IGLARSTACELGKHGIRVNC---ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG 227
             L R+     G   I  NC     P+  P +++       L    +        +RD  
Sbjct: 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWL 234

Query: 228 SLLRGRSASIEDVAQAALFLASEEA 252
                    +ED A+A   + +E  
Sbjct: 235 --------YVEDHARALHMVVTEGK 251

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 48.6 bits (115), Expect = 3e-07
 Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 38/203 (18%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIAD----------ILDELGAALASTIGGRYIH 67
           KVA+ITG     G+  A+   E G  +              +                 +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 68  CDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
            D++   ++   +      + Q D ++N   +S    S      E  ++   V+  G L 
Sbjct: 62  GDLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVSF-----ESPEYTADVDAMGTLR 111

Query: 128 GIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH------------AYSLSKEAIIGLAR 175
            ++        G  K +    +S++ + G +                Y+++K     +  
Sbjct: 112 LLEAIRFL---GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITV 168

Query: 176 STACELGKHGIRVNCISPHGVPS 198
           +       +G+           S
Sbjct: 169 NYR---ESYGMYACNGILFNHES 188

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 43/238 (18%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADI---------LDELGAALASTIGGRY--I 66
            VA+ITG     G+  A+   E G  +              ++ L     + I G     
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 67  HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGIL 126
           + D+T    +   +      + +   ++N    S    S         ++   V+  G L
Sbjct: 62  YGDLTDSTCLVKII-----NEVKPTEIYNLGAQSHVKISFD-----LAEYTADVDGVGTL 111

Query: 127 HGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH------------AYSLSKEAIIGLA 174
             +         G         +S++ + G +                Y  +K     + 
Sbjct: 112 RLLDAVKTC---GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV 168

Query: 175 RSTACELGKHGIRVNC-------ISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRD 225
            +         +              + V  ++  +  + YLG+ +          RD
Sbjct: 169 VNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 226

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (104), Expect = 5e-06
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEED 75
           +TGG+  IG+ T     +NG  ++I D L     ++   I         ++  D+  E  
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL 64

Query: 76  VESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA 135
           +       +     +D + + AG+   G S+     +        N+NG L  I     A
Sbjct: 65  MT-----EILHDHAIDTVIHFAGLKAVGESV-----QKPLEYYDNNVNGTLRLISAMRAA 114

Query: 136 MIE 138
            ++
Sbjct: 115 NVK 117

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 41.6 bits (96), Expect = 5e-05
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 22  ITGGARGIGAATAKLFAENGAHIVIADILDELG-----AALASTIGGRYIHCDVTKEEDV 76
           ITGG   +G+  A      G  +++ D L   G       L+S     ++H D+  + DV
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV 64

Query: 77  ESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILH 127
              +      K   D  F+ AG      SI     ++      +N+ G L+
Sbjct: 65  TRLI-----TKYMPDSCFHLAGQVAMTTSI-----DNPCMDFEINVGGTLN 105

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 40/196 (20%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           K  +ITGGA  +G+        +G  + + D     G          + + ++   + VE
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT-GRKRNVEHWIGHENFELINHDVVE 60

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMI 137
                      ++D +++ A  +     +      +    L  N  G L+ +  A +   
Sbjct: 61  PLYI-------EVDQIYHLASPASPPNYM-----YNPIKTLKTNTIGTLNMLGLAKRV-- 106

Query: 138 EGQRKGSIICTSSSAAIMGGLASH-----------------AYSLSKEAIIGLARSTACE 180
                G+ +  +S++ + G    H                  Y   K     +  +    
Sbjct: 107 -----GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM-- 159

Query: 181 LGKHGIRVNCISPHGV 196
             + G+ V        
Sbjct: 160 -KQEGVEVRVARIFNT 174

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 27/201 (13%), Positives = 60/201 (29%), Gaps = 52/201 (25%)

Query: 12  SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT 71
           +K+   +V  I G    +G+A  +   + G   ++    DEL               ++ 
Sbjct: 1   AKQ---RV-FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL---------------NLL 41

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
               V            ++D ++  A   G   +  +   + +      N+    + I  
Sbjct: 42  DSRAVHDFFA-----SERIDQVYLAAAKVGGIVANNTYPADFIY----QNMMIESNIIHA 92

Query: 132 AAKAMIEGQRKGSIICTSSSAAIMGGL----------------ASHAYSLSKEAIIGLAR 175
           A +  +       ++   SS                        +  Y+++K A I L  
Sbjct: 93  AHQNDVN-----KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 147

Query: 176 STACELGKHGIRVNCISPHGV 196
           S      ++G     + P  +
Sbjct: 148 SYN---RQYGRDYRSVMPTNL 165

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 20/161 (12%)

Query: 18  KVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTI----GGRYIHCDVTK 72
           KVA+I  G+  IG     L A    A +V+ D++  +    A  +         +  V  
Sbjct: 9   KVAMI--GSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 66

Query: 73  EEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHA 132
           E   E+A+  A       D +   AG++   G   S    +     +  +      I+  
Sbjct: 67  EYSYEAALTGA-------DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKI------IREI 113

Query: 133 AKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL 173
            + + +   K  II  ++    M  +   A  +    I G+
Sbjct: 114 GQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGM 154

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 5e-04
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 16/127 (12%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVT 71
           K+ ++TGGA  IG+ T     ENG   V+AD L        + +         +   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 72  KEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKH 131
             + +E      V  + ++D + + AG+          + +        N+ G +  ++ 
Sbjct: 62  DRKGLEK-----VFKEYKIDSVIHFAGLKA-----VGESTQIPLRYYHNNILGTVVLLEL 111

Query: 132 AAKAMIE 138
             +  + 
Sbjct: 112 MQQYNVS 118

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.7 bits (88), Expect = 6e-04
 Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 4/64 (6%)

Query: 17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAALASTIGGRYIHCDVTK 72
          GK   +TG     G   +      GA +    +       L        G +    D+  
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67

Query: 73 EEDV 76
          +  +
Sbjct: 68 QNKL 71

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 3/119 (2%)

Query: 18  KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVE 77
           KV +ITG A  IG+   +   +    +V  D            +         +  + ++
Sbjct: 17  KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76

Query: 78  SAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAM 136
             +R           +      +  G    S  + D     + N++G L+ +  AA+  
Sbjct: 77  GDIRNLDDCNNACAGVDYVLHQAALGSVPRS--INDPITSNATNIDGFLN-MLIAARDA 132

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (80), Expect = 0.004
 Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 18 KVAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTIGGRYIHCDVTKEEDV 76
          +V +I G    IG    +       + V   DI  +  +   +     ++  D++   + 
Sbjct: 2  RV-LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 77 ES 78
            
Sbjct: 61 IE 62

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.7 bits (80), Expect = 0.004
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL 50
          G   ++ GG    G ATA   ++    + I D L
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	278
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.79
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.79
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.78
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.76
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.74
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.73
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.71
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.7
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.68
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.68
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.64
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.64
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.62
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.6
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.41
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.34
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.27
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.24
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.2
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.14
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.17
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.16
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.1
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.06
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.05
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.03
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.02
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.98
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.96
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.74
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.63
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.53
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.52
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.51
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.51
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.49
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.4
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.38
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.36
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.35
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.28
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.24
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.21
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.19
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.18
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.12
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.1
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.09
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.06
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.03
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.02
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.01
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.99
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.95
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.91
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.79
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.78
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.78
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.72
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.69
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.66
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.64
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.61
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.58
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.57
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.56
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.55
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.54
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.51
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.5
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.47
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.45
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.45
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.42
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.35
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.09
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.0
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.0
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.0
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.95
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.92
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.74
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.69
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.63
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.47
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.46
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.39
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.23
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.22
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.18
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.15
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.93
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.79
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.75
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.75
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.71
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.69
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.63
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.55
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.52
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.49
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.18
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.1
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.1
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.94
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.65
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	93.49
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.23
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.22
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.92
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.92
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.68
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.35
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.32
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.19
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.07
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.01
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.92
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.79
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.78
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.45
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.42
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.32
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.29
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.04
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.97
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.8
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.78
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.75
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.73
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.55
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.52
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.33
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.27
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	89.7
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.63
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.6
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.58
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.15
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.95
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.91
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.9
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.8
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	88.75
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	88.49
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.11
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.98
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.89
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.89
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.88
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.59
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	87.45
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.33
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.23
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.72
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.44
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.2
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	86.19
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.05
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.95
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	85.88
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	85.81
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	85.72
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.66
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.38
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	84.81
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.62
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.46
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	84.4
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.26
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	84.12
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.09
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.86
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	83.66
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.4
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.98
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	82.93
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	82.93
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.56
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	82.46
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.3
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	81.86
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	81.61
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	81.26
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	81.0
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	80.94
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.56
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	80.35

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=7e-58  Score=385.54  Aligned_cols=253  Identities=35%  Similarity=0.480  Sum_probs=227.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++  +.++.+|++|+++++++++++.+++|+|
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            35899999999999999999999999999999999999999988888775  5678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+++.++|++.+++|+.++++++++++|.|.++++.|+||++||..+..+.++..+|++||+|+
T Consensus        81 DilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (256)
T d1k2wa_          81 DILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAV  159 (256)
T ss_dssp             CEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEeecccc-cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHH
Confidence            9999999986 457899999999999999999999999999999987766579999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+|+++.|++++|||||+|+||+++|+++.............+.++..+.+...  .|++|+++|+|+|++++||+|+
T Consensus       160 ~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~PlgR~~~p~evA~~v~fL~S~  237 (256)
T d1k2wa_         160 ISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA--VPFGRMGRAEDLTGMAIFLATP  237 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH--STTSSCBCHHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999988776544433334444444333332  3789999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      +++|+||++|.+|||+++
T Consensus       238 ~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         238 EADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             hhCCccCceEEECcchhh
Confidence            999999999999999876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.4e-57  Score=382.36  Aligned_cols=250  Identities=30%  Similarity=0.470  Sum_probs=222.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++       ++.++.||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877665433       3567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ||+||+||||||+.....++.+++.++|++.+++|+.++++++|+++|.|++++ .|+||++||..+..+.++..+|++|
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHHH
Confidence            999999999999876677899999999999999999999999999999998866 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++....+......   .+++..+..  ....|++|+++|||+|++++|
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~--~~~~pl~R~~~p~dvA~~v~f  234 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE---NPRKAAEEF--IQVNPSKRYGEAPEIAAVVAF  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT---CHHHHHHHH--HTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcc---cHHHHHHHH--HhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998776443211   233333322  233478999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+|+.++|+||++|.+|||++..
T Consensus       235 L~S~~s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         235 LLSDDASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HhCchhcCCcCceEEcCcchhcc
Confidence            99999999999999999999854

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-58  Score=383.23  Aligned_cols=248  Identities=32%  Similarity=0.453  Sum_probs=221.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++ ..++.||++|+++++++++++.++||+||
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            36899999999999999999999999999999999999999988887754 67889999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||......++++.+.++|++.+++|+.++++++++++|.|+++  .|+||++||..+..+.++..+|+++|+|+.
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  159 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVT  159 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccccccCcchhHHHHhhHH
Confidence            999999987666788999999999999999999999999999999864  489999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+|+++.|++++|||||+|+||+++|++..+......    .+.+...+...   ..|++|+++|||+|++++||+|+ 
T Consensus       160 ~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~----~~~~~~~~~~~---~~pl~R~g~p~eva~~v~fL~Sd-  231 (250)
T d1ydea1         160 AMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP----DPRASIREGML---AQPLGRMGQPAEVGAAAVFLASE-  231 (250)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSS----SHHHHHHHHHH---TSTTSSCBCHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCC----CHHHHHHHHHh---cCCCCCCCCHHHHHHHHHHHhCc-
Confidence            99999999999999999999999999999876542110    11122223222   34789999999999999999986 


Q ss_pred             CCCceeeEEeecCCcccCc
Q 023708          252 AGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~~~  270 (278)
                      ++|+||++|.+|||+++|.
T Consensus       232 a~~itG~~i~vDGG~~lG~  250 (250)
T d1ydea1         232 ANFCTGIELLVTGGAELGY  250 (250)
T ss_dssp             CTTCCSCEEEESTTTTSCC
T ss_pred             cCCCcCCeEEECCCcccCC
Confidence            7899999999999999873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.7e-58  Score=381.85  Aligned_cols=240  Identities=29%  Similarity=0.480  Sum_probs=220.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++  ..++.+|++++++++++++++.+++|++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            6899999999999999999999999999999999999999888877664  56789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.++..+|++||+|++
T Consensus        81 ilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal~  158 (243)
T d1q7ba_          81 ILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGLI  158 (243)
T ss_dssp             EEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             eehhhhhhc-cccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence            999999986 557899999999999999999999999999999999866 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+|+++.|++++|||||+|+||+++|++....          .++.......   ..|++|+++|||+|++++||+|+.
T Consensus       159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~----------~~~~~~~~~~---~~pl~R~~~pedvA~~v~fL~S~~  225 (243)
T d1q7ba_         159 GFSKSLAREVASRGITVNVVAPGFIETDMTRAL----------SDDQRAGILA---QVPAGRLGGAQEIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----------CHHHHHHHHT---TCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhCccCeEEEEEecceEechhhhhh----------hhhHHHHHHh---cCCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999987643          2333333332   347899999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ++|+|||+|.+|||+++
T Consensus       226 s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         226 AAYITGETLHVNGGMYM  242 (243)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             hcCCcCCeEEECCCeEe
Confidence            99999999999999875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-57  Score=377.51  Aligned_cols=241  Identities=37%  Similarity=0.512  Sum_probs=218.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++..++.||++|+++++++++++.+++|+||+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            36899999999999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  172 (278)
                      ||||||+. ...++.+.+.++|++.+++|+.++++++|+++|.|.+++ .++++++|| .+..+.++..+|++||+|+.+
T Consensus        81 lVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~  157 (242)
T d1ulsa_          81 VVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTAS-RVYLGNLGQANYAASMAGVVG  157 (242)
T ss_dssp             EEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECC-GGGGCCTTCHHHHHHHHHHHH
T ss_pred             EEECCccc-ccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecc-ccccCCCCCcchHHHHHHHHH
Confidence            99999986 457899999999999999999999999999999998755 566777666 567788999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      |+|+++.|++++|||||+|+||+++|++....          +.+........   .|++|+++|||+|++++||+|+.+
T Consensus       158 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~----------~~~~~~~~~~~---~pl~R~~~pedia~~v~fL~S~~s  224 (242)
T d1ulsa_         158 LTRTLALELGRWGIRVNTLAPGFIETRMTAKV----------PEKVREKAIAA---TPLGRAGKPLEVAYAALFLLSDES  224 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS----------CHHHHHHHHHT---CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHhhhCcEEEEEeeCcccChhhhcC----------CHHHHHHHHhc---CCCCCCCCHHHHHHHHHHHhchhh
Confidence            99999999999999999999999999987532          22333333332   478999999999999999999999


Q ss_pred             CCceeeEEeecCCcccC
Q 023708          253 GFITAHNLVIDGGYTTG  269 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~~  269 (278)
                      +|+||++|.+|||+++|
T Consensus       225 ~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         225 SFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             TTCCSCEEEESTTTTTT
T ss_pred             CCCCCcEEEECCCccCC
Confidence            99999999999999986

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=5.8e-57  Score=380.53  Aligned_cols=251  Identities=31%  Similarity=0.406  Sum_probs=220.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++     ++.++.+|++|+++++++++++.+
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999999974 3455444432     256789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      ++|+||+||||||+. ...++.+++.++|++.+++|+.++++++++++|.|.+++..++||++||..+..+.++..+|++
T Consensus        82 ~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~a  160 (261)
T d1geea_          82 EFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCEeeccceec-CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccccc
Confidence            999999999999986 4568999999999999999999999999999999988775667999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++....+.        +++......   ...|++|+++|||||++++
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~--------~~~~~~~~~---~~~pl~R~~~pediA~~v~  229 (261)
T d1geea_         161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--------DPEQRADVE---SMIPMGYIGEPEEIAAVAA  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--------SHHHHHHHH---TTCTTSSCBCHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcC--------CHHHHHHHH---hcCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999876542        233333332   2347899999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccCcCcccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      ||+|+.++|+||++|.+|||+++. |.+.+
T Consensus       230 fL~S~~s~~itG~~i~vDGG~sl~-p~~~~  258 (261)
T d1geea_         230 WLASSEASYVTGITLFADGGMTLY-PSFQA  258 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC-GGGGG
T ss_pred             HHhCchhcCCcCCeEEECCCeeCC-CCCCC
Confidence            999999999999999999999984 55543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.2e-57  Score=378.66  Aligned_cols=245  Identities=34%  Similarity=0.486  Sum_probs=217.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.. ++.+..+..++++|++|+++++++++++.+++|+||+|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            47899999999999999999999999999999999987654 45666788899999999999999999999999999999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||+. ...++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||+++|..+..+.++..+|+++|+|+++|
T Consensus        81 VnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  158 (248)
T d2d1ya1          81 VNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNL  158 (248)
T ss_dssp             EECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred             EEeCcCC-CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHHHHHHHH
Confidence            9999987 457899999999999999999999999999999999866 79999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCC
Q 023708          174 ARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAG  253 (278)
Q Consensus       174 ~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  253 (278)
                      +|++++|++++|||||+|+||+++|++........     ..+++..+....  ..|++|+++|||+|++++||+|+.++
T Consensus       159 tk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~--~~pl~R~~~pedia~~v~fL~S~~s~  231 (248)
T d2d1ya1         159 TRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS-----PDPERTRRDWED--LHALRRLGKPEEVAEAVLFLASEKAS  231 (248)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-------------CHHHHT--TSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcC-----CCHHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999987654211     123333333322  34789999999999999999999999


Q ss_pred             CceeeEEeecCCccc
Q 023708          254 FITAHNLVIDGGYTT  268 (278)
Q Consensus       254 ~~tG~~i~~dgG~~~  268 (278)
                      |+||++|.+|||++.
T Consensus       232 ~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         232 FITGAILPVDGGMTA  246 (248)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCcEEEcCcCccc
Confidence            999999999999975

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.5e-57  Score=377.55  Aligned_cols=242  Identities=31%  Similarity=0.461  Sum_probs=216.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++      ++.++.+|++|+++++++++++.+++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999999988777654432      25678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhh
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLS  166 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~s  166 (278)
                      |+||+||||||+. ...++.+++.++|++.+++|+.++++++|+++|.|++++ .|+||+++|..+. .+.++..+|++|
T Consensus        82 g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          82 GKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchHHH
Confidence            9999999999986 567899999999999999999999999999999998866 7999999998764 577888899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|+++|+|+++.|++++|||||+|+||+++|++......        +++........   .|++|+++|||+|++++|
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~--------~~~~~~~~~~~---~pl~R~~~pedvA~~v~f  228 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--------DPEKLDYMLKR---IPLGRTGVPEDLKGVAVF  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--------CHHHHHHHHHT---CTTSSCBCGGGGHHHHHH
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC--------CHHHHHHHHhc---CCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999877652        23444444433   478999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|++++|+||++|.+|||++.
T Consensus       229 L~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         229 LASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhCCCcCcEEEeCcCeeC
Confidence            9999999999999999999974

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=6.2e-57  Score=378.55  Aligned_cols=243  Identities=31%  Similarity=0.461  Sum_probs=219.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++    +.++.+|++|+++++++++++.+++|
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46999999999999999999999999999999999999988888776654    67889999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      +||+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++..++||++||..+..+.++..+|++||+
T Consensus        82 ~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          82 PVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CceEEEeccccc-cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            999999999987 4578999999999999999999999999999999998765569999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          169 AIIGLARSTACE--LGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       169 a~~~l~~~l~~e--~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+.+|+++++.|  ++++|||||+|+||+++|++.....         .+++..   ......|++|+++|||+|++++|
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~---------~~~~~~---~~~~~~pl~R~~~pedvA~~v~f  228 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---------GAEEAM---SQRTKTPMGHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---------THHHHH---TSTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC---------CHHHHH---HHHhCCCCCCCcCHHHHHHHHHH
Confidence            999999999998  5689999999999999999976532         222222   22334588999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|+.++|+||++|.+|||++.
T Consensus       229 L~S~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         229 LASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhCCCcCcEEEECccccc
Confidence            9999999999999999999973

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.8e-57  Score=382.12  Aligned_cols=250  Identities=30%  Similarity=0.422  Sum_probs=207.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhh----h--CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALAST----I--GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~----~--~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.++    .  ++.++.+|++|+++++++++++.++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999863 444444332    2  35678899999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |+||+||||||+. ...++.+.+.++|++.|++|+.++++++++++|+|++++ .|+||++||..+..+.++..+|++||
T Consensus        82 G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccc-cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhhh
Confidence            9999999999986 457899999999999999999999999999999999876 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHH-HHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVC-KMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      +|+.+|+|+++.|++++|||||+|+||+++|++..............++++.. +.+..  ..|++|+++|||+|++++|
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Pl~R~g~pediA~~v~f  237 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE--KQPSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH--HCTTCCCBCHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHh--cCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999988766543333322222221 11222  2478999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCccc
Q 023708          247 LASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      |||+.+.|+||++|.+|||++.
T Consensus       238 L~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         238 LASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhCCCcCCEEEECcchhc
Confidence            9999999999999999999873

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=8.2e-57  Score=377.78  Aligned_cols=242  Identities=38%  Similarity=0.542  Sum_probs=220.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++  +.++.+|++++++++++++++.+++|++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            57999999999999999999999999999999999999998888877664  6788999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++..+|++||+|+
T Consensus        81 DilVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal  158 (254)
T d1hdca_          81 DGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGV  158 (254)
T ss_dssp             CEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEecCccc-cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHHHHH
Confidence            9999999986 557899999999999999999999999999999999876 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA-SIEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edva~~~~~l~s  249 (278)
                      .+|+|+|+.|++++|||||+|+||+++|++..+......             .......|++|++ .|||+|++++||+|
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~-------------~~~~~~~pl~R~g~~PedvA~~v~fL~S  225 (254)
T d1hdca_         159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG-------------EGNYPNTPMGRVGNEPGEIAGAVVKLLS  225 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS-------------TTSCTTSTTSSCB-CHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHH-------------HHHHhCCCCCCCCCCHHHHHHHHHHHhc
Confidence            999999999999999999999999999999865431110             1122345789997 69999999999999


Q ss_pred             CCCCCceeeEEeecCCcccC
Q 023708          250 EEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +.++|+||++|.+|||++.+
T Consensus       226 ~~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         226 DTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             GGGTTCCSCEEEESTTTTTS
T ss_pred             hhhCCCCCceEEeCCCccCC
Confidence            99999999999999999986

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-57  Score=378.12  Aligned_cols=244  Identities=32%  Similarity=0.460  Sum_probs=219.2

Q ss_pred             cccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++.++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++++|++++++++++++++.
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999988888776554     26778999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +++|++|+||||||+... .++ +.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++..+|+
T Consensus        84 ~~~g~iDilvnnAG~~~~-~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HHHSSCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHcCCCCEeeeCCcCCCC-Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccch
Confidence            999999999999998643 454 789999999999999999999999999999876 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++....+         +++........   .|++|+++|||+|+++
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---------~~e~~~~~~~~---~pl~R~g~pedvA~~v  228 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI---------TPEIEQKMLQH---TPIRRLGQPQDIANAA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------CHHHHHHHHHT---CSSCSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC---------CHHHHHHHHhc---CCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999876533         44444444333   4789999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCccc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +||+|+.++|+||++|.+|||+..
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         229 LFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHhCchhcCCcCCEEEECcCccc
Confidence            999999999999999999999854

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.6e-56  Score=377.68  Aligned_cols=248  Identities=22%  Similarity=0.309  Sum_probs=220.7

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.     +.++.+|++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999999999988887766542     567889999999999999999998


Q ss_pred             cC-CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           87 KG-QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        87 ~g-~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      ++ ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        83 ~~~~idilvnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  160 (259)
T d2ae2a_          83 FHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGA  160 (259)
T ss_dssp             TTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCceEEEECCcee-ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchHH
Confidence            87 799999999986 557899999999999999999999999999999999866 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+++|+|+++.|++++|||||+|+||+++|++.+....        .++..+.........|++|+++|||+|++++
T Consensus       161 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--------~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~  232 (259)
T d2ae2a_         161 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ--------DPEQKENLNKLIDRCALRRMGEPKELAAMVA  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT--------SHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh--------chhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999876542        1221111122223358899999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ||+|+.++|+||++|.+|||++..
T Consensus       233 fL~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCchhCCCcCcEEEECCCeEee
Confidence            999999999999999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.4e-57  Score=375.56  Aligned_cols=238  Identities=42%  Similarity=0.623  Sum_probs=219.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++  +.++++|++|+++++++++++.+++|++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999999999888877664  6678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||.. ...++.+++.++|++.+++|+.++++++|+++|.|.+++ .|+||++||..+..+.++...|+++|+++
T Consensus        82 dilinnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal  159 (244)
T d1nffa_          82 HVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAV  159 (244)
T ss_dssp             CEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCccc-CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHHHHH
Confidence            9999999986 557899999999999999999999999999999999876 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+|+++.|++++|||||+|+||+++|++.....           +       .....|++|+++|||+|++++||+|+
T Consensus       160 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-----------~-------~~~~~pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         160 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-----------E-------DIFQTALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-----------T-------TCSCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh-----------H-------HHHhccccCCCCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999864311           1       12235789999999999999999999


Q ss_pred             CCCCceeeEEeecCCcccCc
Q 023708          251 EAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~~~  270 (278)
                      .++|+||++|.+|||++.+.
T Consensus       222 ~s~~itG~~i~vDGG~~ag~  241 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGTVAGL  241 (244)
T ss_dssp             GGTTCCSCEEEESTTGGGSC
T ss_pred             hhCCCcCCEEEECCCeeccc
Confidence            99999999999999999764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.4e-56  Score=378.05  Aligned_cols=247  Identities=27%  Similarity=0.398  Sum_probs=221.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++.+|++|+++++++++++.++||+||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999999999988888776654     367789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHccCCCcEEEEecCchhhcCCCCCchhhhhHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA--MIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEA  169 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  169 (278)
                      +||||||+. ...++.+++.++|++.+++|+.++++++|+++|+  |.+++ .++||+++|..+..+.++..+|++||+|
T Consensus        82 ilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          82 VLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             EEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEeccccc-CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHHHH
Confidence            999999986 4578999999999999999999999999999997  44444 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          170 IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       170 ~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +.+|+|+++.|++++|||||+|+||+++|++...............+++..+.+..  ..|++|+++|||+|++++||||
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~PlgR~~~pedia~~v~fL~S  237 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA--RVPIGRYVQPSEVAEMVAYLIG  237 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHT--TSTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999887665544444555555444333  3488999999999999999999


Q ss_pred             CCCCCceeeEEeecCCcc
Q 023708          250 EEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~  267 (278)
                      +.++|+||++|.+|||++
T Consensus       238 ~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         238 PGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             chhcCCcCceEEECcCcc
Confidence            999999999999999975

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.3e-57  Score=377.46  Aligned_cols=242  Identities=29%  Similarity=0.435  Sum_probs=215.5

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ....|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++.+|++|+++++++++++.+
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888776554     267889999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      ++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++..+|++
T Consensus        84 ~~g~iDilvnnag~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          84 EHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             HCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hcCCceeeeeccccc-cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHH
Confidence            999999999999986 556889999999999999999999999999999999876 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+++|+|+++.|++++|||||+|+||+++|++....          +++.......   ..|++|+++|||+|++++
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~----------~~~~~~~~~~---~~pl~R~~~pedvA~~v~  228 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI----------SEQIKKNIIS---NIPAGRMGTPEEVANLAC  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C----------CHHHHHHHHT---TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999987542          2333333332   347899999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcc
Q 023708          246 FLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ||+|++++|+||++|.+|||+|
T Consensus       229 fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         229 FLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHhCchhCCCcCcEEEECCCcC
Confidence            9999999999999999999986

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2e-56  Score=376.55  Aligned_cols=249  Identities=32%  Similarity=0.422  Sum_probs=221.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++.||++|+++++++++++.++||+||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            378999999999999999999999999999999998888776554     366789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+++.++|++.+++|+.++++++++++|.|.++++.++||++||..+..+.++...|++||+|++
T Consensus        81 ilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          81 VIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEeccccc-ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            999999986 5678999999999999999999999999999999888766789999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+|+++.|++++|||||+|+||+++|+++....+..........++.......  ..|++|+++|||+|++++||+|+.
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pl~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK--RITLGRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT--TCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHh--cCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999877654433333333333322222  347899999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ++|+||++|.+|||+.+
T Consensus       238 a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             hCCccCcEEEecCCEEe
Confidence            99999999999999875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.2e-56  Score=374.29  Aligned_cols=242  Identities=35%  Similarity=0.412  Sum_probs=205.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-HHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-LGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++ ..++..+..+  +.++.+|++|+++++++++++.+++|+|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999998753 3333334433  5678999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|.|++++ .|+||++||..+..+.++..+|++||+|+
T Consensus        82 DilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (247)
T d2ew8a1          82 DILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAAN  159 (247)
T ss_dssp             CEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhhccH
Confidence            9999999986 557899999999999999999999999999999999876 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      .+|+|+++.|++++|||||+|+||+++|++.......         ........  ...|++|+++|||+|++++||+|+
T Consensus       160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~---------~~~~~~~~--~~~~l~r~~~pedvA~~v~fL~S~  228 (247)
T d2ew8a1         160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS---------AMFDVLPN--MLQAIPRLQVPLDLTGAAAFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC---------------------------C--TTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc---------hhHHHHHH--HhccCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999998654311         11111111  122678999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      .++|+||++|.+|||+++
T Consensus       229 ~s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         229 DASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             GGTTCCSCEEEESSSCCC
T ss_pred             hhcCCcCCeEEECCCEec
Confidence            999999999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.7e-57  Score=379.89  Aligned_cols=250  Identities=29%  Similarity=0.369  Sum_probs=196.6

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++.++.||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888776554     3678899999999999999999999


Q ss_pred             c-CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           87 K-GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        87 ~-g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      + |++|+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|.|++++ .|+||++||..+..+.++..+|++
T Consensus        83 ~~g~idilvnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          83 FGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHH
T ss_pred             hCCCccccccccccc-CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccccccccccc
Confidence            8 6899999999987 457889999999999999999999999999999998866 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++......          ++..+..  ....|++|+++|||||++++
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~----------~~~~~~~--~~~~pl~R~~~pedvA~~v~  228 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD----------DEFKKVV--ISRKPLGRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------------CCGGGGHHHHH
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch----------HHHHHHH--HhCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999865441          1111111  12247899999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccCcCcccc
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTGTSSMSF  275 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~~~~~~~  275 (278)
                      ||+|+.++|+||++|.+|||+++....+.|
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~~g~~~~p  258 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTVNGFSYQP  258 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEETTEEECC
T ss_pred             HHhCchhcCCcCcEEEeCCCEECCCCCCCC
Confidence            999999999999999999999988766654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=6e-56  Score=374.51  Aligned_cols=250  Identities=32%  Similarity=0.460  Sum_probs=222.2

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++     ++.++.||++|+++++++++++.++|
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999999998888776654     35788999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      |++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++..+|++||
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHH
Confidence            99999999999876667899999999999999999999999999999998866 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhh-----ccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL-----GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.........     ......++...+.+..  ..|++|+++|||+|+
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Pl~R~g~pedvA~  237 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG--SVPMRRYGDINEIPG  237 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH--TSTTSSCBCGGGSHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh--cCCCCCCcCHHHHHH
Confidence            999999999999999999999999999999999866543221     1122344444443333  247899999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCC
Q 023708          243 AALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      +++||+|+.+.|+||++|.+|||
T Consensus       238 ~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         238 VVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHhCchhcCccCCeEEeCCC
Confidence            99999999999999999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.7e-56  Score=371.30  Aligned_cols=237  Identities=25%  Similarity=0.396  Sum_probs=205.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      +++.|+||++|||||++|||+++|++|+++|++|++++|+++..+      ++..+++|++|+++++++++++.+++|++
T Consensus         1 ~~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           1 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            356799999999999999999999999999999999999865432      35688999999999999999999999999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++..+|++||+|+
T Consensus        75 DiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaal  152 (237)
T d1uzma1          75 EVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGV  152 (237)
T ss_dssp             SEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHH
T ss_pred             eEEEeeeccc-ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHHHHH
Confidence            9999999986 457899999999999999999999999999999999876 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+|+++.|++++|||||+|+||+++|++....          ++........   ..|++|+++|||+|++++||+|+
T Consensus       153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~----------~~~~~~~~~~---~~pl~R~~~pedvA~~v~fL~S~  219 (237)
T d1uzma1         153 IGMARSIARELSKANVTANVVAPGYIDTDMTRAL----------DERIQQGALQ---FIPAKRVGTPAEVAGVVSFLASE  219 (237)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS----------CHHHHHHHGG---GCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc----------CHHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999987642          2222222222   34789999999999999999999


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      +++|+||++|.+|||+++
T Consensus       220 ~s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         220 DASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             hhcCCcCCeEEECCCCCC
Confidence            999999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=9.4e-56  Score=375.11  Aligned_cols=252  Identities=43%  Similarity=0.695  Sum_probs=222.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++    +.++.||++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999999888877654    567899999999999999999999999


Q ss_pred             ccEEEECCccCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC-chhhhhH
Q 023708           90 LDIMFNNAGISGSG-GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS-HAYSLSK  167 (278)
Q Consensus        90 id~li~nag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~Y~~sK  167 (278)
                      +|+||||||+.... ..+.+.+.++|++.+++|+.++++++|+++|+|.+++ .|++|+++|..+..+.++. ..|++||
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhH
Confidence            99999999976442 3578999999999999999999999999999999866 7999999999998877664 4899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      +|+++|+|+++.||+++|||||+|+||+++|++..+.+       ...++........ ...|.+|+++|||||++++||
T Consensus       162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~~~~~~~~~~-~~~~~gr~~~pedvA~~v~fL  233 (268)
T d2bgka1         162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF-------GVDSSRVEELAHQ-AANLKGTLLRAEDVADAVAYL  233 (268)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS-------SCCHHHHHHHHHH-TCSSCSCCCCHHHHHHHHHHH
T ss_pred             HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh-------cCCHHHHHHHHHh-ccccCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999876532       1133333333332 233779999999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcccCcCccc
Q 023708          248 ASEEAGFITAHNLVIDGGYTTGTSSMS  274 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~~~~~~~~  274 (278)
                      +|+++.|+|||+|.+|||++...|...
T Consensus       234 ~S~~s~~itGq~i~VDGG~t~~~p~~p  260 (268)
T d2bgka1         234 AGDESKYVSGLNLVIDGGYTRTNPAFP  260 (268)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCCTHHH
T ss_pred             hChhhCCccCceEEECcCcccCCCCCh
Confidence            999999999999999999999888653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-55  Score=366.62  Aligned_cols=240  Identities=28%  Similarity=0.358  Sum_probs=214.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++. ++.++.+|++|++++++++    +++|+||
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~----~~~g~iD   76 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKAL----GGIGPVD   76 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCCS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHcCCCe
Confidence            4689999999999999999999999999999999999998888887765 4778999999999887765    4679999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+++.++|++.+++|+.++++++++++|.|.+++..|+||+++|..+..+.++..+|+++|+|+.
T Consensus        77 ilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~  155 (242)
T d1cyda_          77 LLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT  155 (242)
T ss_dssp             EEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccc-cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHH
Confidence            999999986 5578999999999999999999999999999998876655799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+|+++.|++++|||||+|+||+++|++......        .++........   .|++|+++|||+|++++||+|+.
T Consensus       156 ~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~--------~~~~~~~~~~~---~pl~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         156 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--------DPEFARKLKER---HPLRKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--------CHHHHHHHHHH---STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC--------CHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999876431        23333333332   37899999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      +.|+||++|.+|||++-
T Consensus       225 s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         225 SASTSGGGILVDAGYLA  241 (242)
T ss_dssp             GTTCCSSEEEESTTGGG
T ss_pred             hcCcCCceEEeCcchhc
Confidence            99999999999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-55  Score=366.40  Aligned_cols=240  Identities=26%  Similarity=0.368  Sum_probs=214.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ...|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++.+ +.++.+|++|++++++++    +++|+|
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~----~~~g~i   77 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERAL----GSVGPV   77 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHhCCc
Confidence            456899999999999999999999999999999999999999888877654 778899999999887766    467999


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHH
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAI  170 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  170 (278)
                      |+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.++...|+||++||..+..+.++...|++||+|+
T Consensus        78 DilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal  156 (244)
T d1pr9a_          78 DLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL  156 (244)
T ss_dssp             CEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             eEEEeccccc-cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHH
Confidence            9999999986 557899999999999999999999999999999876655579999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      ++|+|+++.|++++|||||+|+||+++|++.....        ..++.......   ..|++|+++|||+|++++||+|+
T Consensus       157 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~--------~~~~~~~~~~~---~~pl~R~~~peevA~~v~fL~S~  225 (244)
T d1pr9a_         157 DMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW--------SDPHKAKTMLN---RIPLGKFAEVEHVVNAILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS--------CSHHHHHHHHT---TCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc--------cChHHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999876432        12233333333   34789999999999999999999


Q ss_pred             CCCCceeeEEeecCCcc
Q 023708          251 EAGFITAHNLVIDGGYT  267 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~  267 (278)
                      .++|+||++|.+|||++
T Consensus       226 ~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         226 RSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhCCcCCcEEEECccHh
Confidence            99999999999999997

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.4e-55  Score=366.28  Aligned_cols=236  Identities=29%  Similarity=0.470  Sum_probs=210.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIAD-ILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++|||||++|||+++|++|+++|++|++++ |+++.++++.+++     ++.++.+|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999874 5666666655443     256789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.++++++|+++|.|++++ .|+||++||..+..+.++..+|++||+|+.
T Consensus        82 iLVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccc-cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            999999987 457899999999999999999999999999999998866 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc-cC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SE  250 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~-s~  250 (278)
                      +|+|+++.|++++|||||+|+||+++|++....          .++......   ...|++|+++|||+|++++||+ |+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~----------~~~~~~~~~---~~~pl~R~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL----------GEDMEKKIL---GTIPLGRTGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----------CHHHHHHHH---TSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHh----------hHHHHHHHH---hcCCCCCCcCHHHHHHHHHHHHCCc
Confidence            999999999999999999999999999987642          222222222   2357899999999999999997 89


Q ss_pred             CCCCceeeEEeecCCccc
Q 023708          251 EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       251 ~~~~~tG~~i~~dgG~~~  268 (278)
                      .+.|+||++|.+|||+++
T Consensus       227 ~a~~itG~~i~vdGG~si  244 (244)
T d1edoa_         227 AASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGGGCCSCEEEESTTTTC
T ss_pred             hhcCCcCCeEEeCCCeeC
Confidence            999999999999999975

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.8e-55  Score=366.77  Aligned_cols=243  Identities=33%  Similarity=0.471  Sum_probs=216.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++  ..++.+|++|+++++++++++.+++|++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999999999999988888765  56778999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||+. ...++.+.+.++|++.+++|+.++++++++++|+|+++  .|+||++||..+..+.++..+|++||+|+.
T Consensus        83 ilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (253)
T d1hxha_          83 VLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             eEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCccccccccchhHHHH
Confidence            999999986 44789999999999999999999999999999999653  599999999999999999999999999999


Q ss_pred             HHHHHHHHHHCC--CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELGK--HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  249 (278)
                      +|+|+++.|+++  +|||||+|+||+++|++....+..     ....   +.........|++|+.+|||+|++++||+|
T Consensus       160 ~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~-----~~~~---~~~~~~~~~~~~gr~~~pedvA~~v~fL~S  231 (253)
T d1hxha_         160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK-----GVSK---EMVLHDPKLNRAGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT-----TCCH---HHHBCBTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc-----hhhH---HHHHhCccccccCCCCCHHHHHHHHHHHhC
Confidence            999999999987  469999999999999998654311     1111   112222233467899999999999999999


Q ss_pred             CCCCCceeeEEeecCCcc
Q 023708          250 EEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG~~  267 (278)
                      +.++|+|||+|.+|||+.
T Consensus       232 ~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         232 DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             GGGTTCCSCEEEESSSCT
T ss_pred             hhhCCCcCcEEEECccHh
Confidence            999999999999999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.6e-54  Score=361.72  Aligned_cols=248  Identities=26%  Similarity=0.354  Sum_probs=214.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++     ++++.+|++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999888877765543     5678899999999999999999998


Q ss_pred             -CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           88 -GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        88 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                       |++|+||||||... ..++.+++.++|++.+++|+.++++++++++|.|.++. .|++|++||..+..+.++...|+++
T Consensus        82 ~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          82 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEeccccccc-cCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHHHH
Confidence             57999999999874 46899999999999999999999999999999999876 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|+++|+|.+++|++++|||||+|+||+++|++....+...    ..+.+........   .|++|+++|||+|++++|
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~---~plgR~~~pediA~~v~f  232 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN----PHQKEEIDNFIVK---TPMGRAGKPQEVSALIAF  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------CHHHHHHHHHH---STTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh----hhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999987655322    1133444444433   378999999999999999


Q ss_pred             hccCCCCCceeeEEeecCCcccC
Q 023708          247 LASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |+|+++.|+||++|.+|||++..
T Consensus       233 L~S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         233 LCFPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhChhhCCCcCcEEEeCCCeecc
Confidence            99999999999999999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.4e-54  Score=367.02  Aligned_cols=250  Identities=27%  Similarity=0.355  Sum_probs=211.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++        ++.++.||++|+++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888776554        25688999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC-chhhcCCCCC
Q 023708           85 SWKGQLDIMFNNAGISGSG---GSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS-SAAIMGGLAS  160 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS-~~~~~~~~~~  160 (278)
                      ++||++|+||||||.....   ....+.+.++|++.+++|+.++++++++++|.|++++  +.+|+++| .++..+.++.
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~~~~~~  158 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDF  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSS
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--CccccccchhccccCCCCc
Confidence            9999999999999986432   2335778889999999999999999999999998753  45555555 5678899999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH-HHHHhhcCCCCCCCCCCHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV-CKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ..|++||+|+.+|+|+++.||+++|||||+|+||+++|++.........     ..+.. ..........|++|+++|||
T Consensus       159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~-----~~~~~~~~~~~~~~~~PlgR~g~ped  233 (272)
T d1xkqa_         159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQ-----ASQKFYNFMASHKECIPIGAAGKPEH  233 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHH-----HHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchH-----HHHHHHHHHHHHhcCCCCCCCcCHHH
Confidence            9999999999999999999999999999999999999999865431000     01111 12222344568999999999


Q ss_pred             HHHHHHHhccCC-CCCceeeEEeecCCcccC
Q 023708          240 VAQAALFLASEE-AGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       240 va~~~~~l~s~~-~~~~tG~~i~~dgG~~~~  269 (278)
                      +|++++||+|++ ..|+|||+|.+|||+++.
T Consensus       234 iA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         234 IANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            999999999976 579999999999999975

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.2e-54  Score=364.08  Aligned_cols=244  Identities=28%  Similarity=0.396  Sum_probs=213.3

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      +.++|+||++|||||++|||+++|++|+++|++|++++|+++.+.+..+++      ++.++.||++|+++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999876665544332      36678999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-------CC
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-------GG  157 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-------~~  157 (278)
                      +++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++..+++++++|.....       +.
T Consensus        83 ~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          83 ADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHhCCCcEeccccccc-ccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            9999999999999986 557899999999999999999999999999999997766578888888877654       33


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCH
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASI  237 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
                      ++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++....          +++..+....   ..|++|+++|
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~----------~~~~~~~~~~---~~pl~R~g~p  228 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----------DKKIRDHQAS---NIPLNRFAQP  228 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----------CHHHHHHHHH---TCTTSSCBCG
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc----------CHHHHHHHHh---cCCCCCCcCH
Confidence            56789999999999999999999999999999999999999987542          2333333333   3478999999


Q ss_pred             HHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          238 EDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       238 edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ||+|++++||+|+.++|+||++|.+|||+++
T Consensus       229 edvA~~v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         229 EEMTGQAILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHHHhcchhCCCcCceEEECCCeec
Confidence            9999999999999999999999999999974

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.2e-54  Score=365.83  Aligned_cols=249  Identities=31%  Similarity=0.382  Sum_probs=200.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++        ++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999998888776543        267889999999999999999999


Q ss_pred             hcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch-hhcCCCCCc
Q 023708           86 WKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA-AIMGGLASH  161 (278)
Q Consensus        86 ~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~  161 (278)
                      +||++|+||||||....   ..++.+.+.++|++.+++|+.++++++++++|.|.+++  +++|+++|.. +..+.++..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCch
Confidence            99999999999997532   23567789999999999999999999999999998753  5666666655 577899999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      +|++||+|+++|+|+++.|++++|||||+|+||+++|++........... ....+.......   ..|++|+++|||+|
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~---~~Pl~R~g~pedvA  235 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS-KKFYSTMATMKE---CVPAGVMGQPQDIA  235 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHH---HCTTSSCBCHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHH-HHHHHHHHHHHh---cCCCCCCcCHHHHH
Confidence            99999999999999999999999999999999999999886543211100 001111222222   24789999999999


Q ss_pred             HHHHHhccCC-CCCceeeEEeecCCccc
Q 023708          242 QAALFLASEE-AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       242 ~~~~~l~s~~-~~~~tG~~i~~dgG~~~  268 (278)
                      ++++||+|++ ++|+||++|.+|||+++
T Consensus       236 ~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         236 EVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCCcccCCccCceEEeCCChhh
Confidence            9999999954 89999999999999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.4e-54  Score=366.40  Aligned_cols=250  Identities=24%  Similarity=0.356  Sum_probs=215.6

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++        ++.++.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887766543        256889999999999999999999


Q ss_pred             hcCCccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           86 WKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        86 ~~g~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      +||+||+||||||.... ..+..+.+.++|++.+++|+.++++++++++|.|.+++ .++|+++||..+..+.++..+|+
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceeh
Confidence            99999999999997533 23456678999999999999999999999999998865 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH-hhcCCCCCCCCCCHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV-RDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edva~~  243 (278)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++.........     ..+...... .....+|++|+++|||||++
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~-----~~~~~~~~~~~~~~~iPlgR~g~pediA~~  234 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPET-----ASDKLYSFIGSRKECIPVGHCGKPEEIANI  234 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHH-----HHHHHHHHHHHCTTTCTTSSCBCHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccch-----hhHHHHHHHHHHHcCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999998765421100     112222222 22344689999999999999


Q ss_pred             HHHhccC-CCCCceeeEEeecCCcccC
Q 023708          244 ALFLASE-EAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       244 ~~~l~s~-~~~~~tG~~i~~dgG~~~~  269 (278)
                      ++||+|+ .++|+||++|.+|||+++.
T Consensus       235 v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         235 IVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHcCCccccCccCcEEEeCcCHHHh
Confidence            9999996 5899999999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.8e-55  Score=368.87  Aligned_cols=244  Identities=20%  Similarity=0.202  Sum_probs=214.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      |+|||||++|||+++|++|+++|++|++++|+.+..+++.+. ...+..+|++++++++++++++.++||+||+||||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            799999999999999999999999999999987777766543 2235579999999999999999999999999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTA  178 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~  178 (278)
                      +....+++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.++..+|++||+|+.+|+|+++
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA  159 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLANALS  159 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHHHHHHH
Confidence            876667899999999999999999999999999999999876 7999999999999999999999999999999999999


Q ss_pred             HHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceee
Q 023708          179 CELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAH  258 (278)
Q Consensus       179 ~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~  258 (278)
                      .|++++|||||+|+||+++|++....+...  .....++........   .|++|+++|||+|++++||+|+.++|+||+
T Consensus       160 ~ela~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~e~~~~~~~~---~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         160 KELGEYNIPVFAIGPNYLHSEDSPYFYPTE--PWKTNPEHVAHVKKV---TALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHGGGTCCEEEEEESSBCCBTCCSSCBHH--HHTTCHHHHHHHHHH---SSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHhcccCcEEEEEecCCCcCcchhhhhhcc--cccCCHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            999999999999999999999865432111  111234444444433   378999999999999999999999999999


Q ss_pred             EEeecCCcccC
Q 023708          259 NLVIDGGYTTG  269 (278)
Q Consensus       259 ~i~~dgG~~~~  269 (278)
                      +|.+|||+++.
T Consensus       235 ~i~vdGG~~~~  245 (252)
T d1zmta1         235 VFWLAGGFPMI  245 (252)
T ss_dssp             EEEESTTCCCC
T ss_pred             eEEECCCceeC
Confidence            99999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-54  Score=368.03  Aligned_cols=250  Identities=27%  Similarity=0.351  Sum_probs=217.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----------CCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++          ++.++.||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988777665443          256789999999999999999


Q ss_pred             HHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCch
Q 023708           83 AVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHA  162 (278)
Q Consensus        83 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  162 (278)
                      +.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++|| .+..+.++...
T Consensus        88 ~~~~~G~iDiLVnnAg~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss-~~~~~~~~~~~  164 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV-PTKAGFPLAVH  164 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC-CCTTCCTTCHH
T ss_pred             HHHHhCCeEEEEeecccc-ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc-ccccccccccc
Confidence            999999999999999986 557899999999999999999999999999999998866 688888865 45567888999


Q ss_pred             hhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          163 YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       163 Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+++|++..+.+...      .++...   ......|++|+++|||||+
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~---~~~~~~plgR~g~pedvA~  235 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSW------GQSFFE---GSFQKIPAKRIGVPEEVSS  235 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGG------GGGGGT---TGGGGSTTSSCBCTHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhcccc------CHHHHH---HHHhcCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999876433211      111111   1223357899999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCcccCcCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTTGTSSMS  274 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~~~~~~~  274 (278)
                      +++||+|+.+.|+||++|.+|||+++-.+.+.
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~  267 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVDGGRSLYTHSYE  267 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCBTTCC
T ss_pred             HHHHHhCchhcCcCCcEEEeCcChhhhcCCCC
Confidence            99999999999999999999999998776655

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.1e-53  Score=350.40  Aligned_cols=230  Identities=27%  Similarity=0.400  Sum_probs=204.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++    .+..++.||+++.      ++.+.+++|++|+||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----~~~~~~~~Dv~~~------~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----SGHRYVVCDLRKD------LDLLFEKVKEVDILV   71 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----TCSEEEECCTTTC------HHHHHHHSCCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----cCCcEEEcchHHH------HHHHHHHhCCCcEEE
Confidence            789999999999999999999999999999999999876543    3556889999863      445666889999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||.. ...++.+++.++|++.+++|+.+++.++|+++|.|++++ .|++|+++|..+..+.++...|+++|+|+.+|+
T Consensus        72 nnAG~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~lt  149 (234)
T d1o5ia_          72 LNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFL  149 (234)
T ss_dssp             ECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             eccccc-CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHHHHHHHHH
Confidence            999976 557899999999999999999999999999999999866 799999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 023708          175 RSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGF  254 (278)
Q Consensus       175 ~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  254 (278)
                      |+++.|++++|||||+|+||+++|++.....         +++......   ...|++|+++|||+|++++||+|+.++|
T Consensus       150 k~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---------~~~~~~~~~---~~~pl~R~~~pediA~~v~fL~S~~s~~  217 (234)
T d1o5ia_         150 KTLSFEVAPYGITVNCVAPGWTETERVKELL---------SEEKKKQVE---SQIPMRRMAKPEEIASVVAFLCSEKASY  217 (234)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCTTHHHHS---------CHHHHHHHH---TTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHhcccCeEEeecccCccchhhhhhhc---------CHHHHHHHH---hcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence            9999999999999999999999999987654         222222222   2348899999999999999999999999


Q ss_pred             ceeeEEeecCCccc
Q 023708          255 ITAHNLVIDGGYTT  268 (278)
Q Consensus       255 ~tG~~i~~dgG~~~  268 (278)
                      +||++|.+|||++.
T Consensus       218 itG~~i~vDGG~s~  231 (234)
T d1o5ia_         218 LTGQTIVVDGGLSK  231 (234)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CcCcEEEECccccc
Confidence            99999999999974

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.7e-53  Score=361.15  Aligned_cols=250  Identities=28%  Similarity=0.383  Sum_probs=210.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++.+  +.++.+|++++++++++++++.+++|++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            36899999999999999999999999999999999999998888877654  5678899999999999999999999999


Q ss_pred             cEEEECCccCCCCCC----cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           91 DIMFNNAGISGSGGS----ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        91 d~li~nag~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      |+||||||+......    ..+.+.++|++.|++|+.++++++|+++|.|+++  .|++|+++|..+..+.++..+|++|
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~~~~~~~~~Y~as  158 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPNGGGPLYTAA  158 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSTTSSCHHHHHH
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhccCCCCCchHHHH
Confidence            999999998644333    2444556799999999999999999999999875  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      |+|+.+|+|+++.|+++ +||||+|+||+++|++..........+ .....+..+...  ...|++|+++|||+|++++|
T Consensus       159 Kaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         159 KHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSK-AISTVPLADMLK--SVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGGGC----------CHHHHHT--TTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccchhhhhh-ccCcHHHHHHHH--hcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999997 599999999999999865432111111 111222222222  23588999999999999999


Q ss_pred             hccC-CCCCceeeEEeecCCccc
Q 023708          247 LASE-EAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       247 l~s~-~~~~~tG~~i~~dgG~~~  268 (278)
                      |+|+ .+.|+||++|.+|||+++
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HcCCcccCCeeCcEEEECcChhh
Confidence            9985 689999999999999985

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=8.1e-53  Score=351.34  Aligned_cols=237  Identities=34%  Similarity=0.469  Sum_probs=206.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++  +.++++|++++++++++++++.+++|++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            5899999999999999999999999999999999999998888887776  56789999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      +||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+   .+.++++||.+ ..+.+++..|+++|+|++
T Consensus        82 iLinnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a-~~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          82 GVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVA-GLGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             EEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCT-TCCHHHHHHHHHCSSHHH
T ss_pred             Eeccccccc-cccchhhhhcccccccccccccccccccccccccccc---ccceeeccccc-cccccCccccchhhHHHH
Confidence            999999986 5578999999999999999999999999999998865   34566555554 455578889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          172 GLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +|+|.+++|++++|||||+|+||.++|++...          .+++...+....   .|++|+++|+|+|++++||+|+.
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~----------~~~~~~~~~~~~---~p~~r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAG----------LPPWAWEQEVGA---SPLGRAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT----------SCHHHHHHHHHT---STTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh----------hhHhHHHHHHhC---CCCCCCcCHHHHHHHHHHHhcch
Confidence            99999999999999999999999999998643          244444444443   37899999999999999999999


Q ss_pred             CCCceeeEEeecCCccc
Q 023708          252 AGFITAHNLVIDGGYTT  268 (278)
Q Consensus       252 ~~~~tG~~i~~dgG~~~  268 (278)
                      ++|+||++|.+|||+++
T Consensus       224 s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         224 SAYITGQALYVDGGRSI  240 (241)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hCCCcCceEEeCCCccc
Confidence            99999999999999986

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.6e-53  Score=355.08  Aligned_cols=246  Identities=23%  Similarity=0.260  Sum_probs=206.9

Q ss_pred             cccCCCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHHHHHHh---h-hCCeEEEecCCCHHHHHHHHHHH
Q 023708           10 LSSKRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAALAS---T-IGGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        10 ~~~~~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~---~-~~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |+..+|+||++|||||++  |||+++|++|+++|++|++++|+++..++..+   . ....++++|++|+++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            566789999999999986  99999999999999999999998654443322   2 23678899999999999999999


Q ss_pred             HhhcCCccEEEECCccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC
Q 023708           84 VSWKGQLDIMFNNAGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      .+++|++|+||||||....   ..++.+.+.++|+..+++|+.+++.++++++|.|.+   .|+||++||..+..+.++.
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTC
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCCCCCc
Confidence            9999999999999997532   335678899999999999999999999999999865   5899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDV  240 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  240 (278)
                      .+|++||+|+++|+|+++.||+++|||||+|+||+++|++......        ..+..+.....   .|++|+++|||+
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~--------~~~~~~~~~~~---~pl~R~~~pedv  226 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--------FTKMYDRVAQT---APLRRNITQEEV  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------CHHHHHHHHHH---STTSSCCCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh--------hHHHHHHHHhc---CCCCCCcCHHHH
Confidence            9999999999999999999999999999999999999998764321        12222333332   378999999999


Q ss_pred             HHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          241 AQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       241 a~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |++++||+|+.++|+||++|.+|||+++.
T Consensus       227 A~~v~fL~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         227 GNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhCCccCCeEEECcCEeCc
Confidence            99999999999999999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.9e-52  Score=351.72  Aligned_cols=253  Identities=28%  Similarity=0.391  Sum_probs=216.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+.+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++     .+.++.+|++|+++++++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3557999999999999999999999999999999999876 44445444332     26678899999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCCCCchh
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLASHAY  163 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y  163 (278)
                      +.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   .+++++++|..+.. +.++...|
T Consensus        92 ~~~g~idilV~nag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~~~~~~~Y  167 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVY  167 (272)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHhCCCCccccccccc-hhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---ccccccccccccccccccchhhH
Confidence            9999999999999976 5578999999999999999999999999999999976   46888888877654 56777889


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccC-CCCHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKA-DMKPEEVCKMVRDSGSLLRGRSASIEDVAQ  242 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edva~  242 (278)
                      +++|+|+++|+|+++.||+++|||||+|+||+++|++............ ....++..+. ......|++|+++|||||+
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~PlgR~~~peevA~  246 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEY-AAVQWSPLRRVGLPIDIAR  246 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHH-HHHHSCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHH-HHHccCCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999888765544332 2333333322 2233458899999999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCccc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +++||+|+.+.|+||++|.+|||+++
T Consensus       247 ~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         247 VVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHhCchhcCccCceEeECCCCCC
Confidence            99999999999999999999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.1e-52  Score=350.41  Aligned_cols=248  Identities=29%  Similarity=0.401  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec-chHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI-LDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +.|.||++|||||++|||+++|++|+++|++|+++++ +++..+++.+++     ++.++.+|++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998754 455455544433     3677899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-CCCCCchhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-GGLASHAYSL  165 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~  165 (278)
                      +|+||+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++   .+++++++|..+.. +.++...|++
T Consensus        82 ~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             cCCCcEEEeccccc-cccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccccCCCCchhHHH
Confidence            99999999999986 5678999999999999999999999999999999965   46777777766644 6889999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhh--ccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYL--GKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      +|+|+++|+|.|++|++++|||||+|+||+++|++.........  .....++++..+.....  .|++|+++|+|||++
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pl~R~g~p~eVa~~  235 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM--NPLKRIGYPADIGRA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT--STTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC--CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999987654322  12233445555444333  378999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ++||+|+.++|+||++|.+|||+
T Consensus       236 v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         236 VSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCchhcCCcCceEEeCCCC
Confidence            99999999999999999999996

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-51  Score=343.38  Aligned_cols=242  Identities=32%  Similarity=0.492  Sum_probs=212.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+..++.+..+|+.+.+.++.    ..+.++++|+|
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~id~l   78 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ----FANEVERLDVL   78 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHH----HHHHCSCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccc----cccccccceeE
Confidence            38999999999999999999999999999999999999988888877778888899988765554    44567899999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh-cCCCCCchhhhhHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI-MGGLASHAYSLSKEAIIG  172 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~Y~~sK~a~~~  172 (278)
                      |||||.. ..+++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||+++|..+. .+.++..+|+++|+|+++
T Consensus        79 Vn~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~  156 (245)
T d2ag5a1          79 FNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIG  156 (245)
T ss_dssp             EECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred             Eeccccc-CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHHHHHHHHH
Confidence            9999987 457899999999999999999999999999999998866 7999999998775 578888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCC
Q 023708          173 LARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       173 l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  252 (278)
                      |+|+++.|++++|||||+|+||+++|++........     ..+++..+....  ..|++|+++|||+|+++.||+++++
T Consensus       157 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~-----~~~~~~~~~~~~--~~pl~R~~~pedva~~v~fL~s~~s  229 (245)
T d2ag5a1         157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR-----GNPEEARNDFLK--RQKTGRFATAEEIAMLCVYLASDES  229 (245)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS-----SSHHHHHHHHHH--TCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh-----hhhHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999988765332     133333332222  2478999999999999999999999


Q ss_pred             CCceeeEEeecCCccc
Q 023708          253 GFITAHNLVIDGGYTT  268 (278)
Q Consensus       253 ~~~tG~~i~~dgG~~~  268 (278)
                      .|+||++|.+|||+|+
T Consensus       230 ~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         230 AYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             CCCcCceEEeCCCcCC
Confidence            9999999999999985

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-51  Score=343.55  Aligned_cols=239  Identities=26%  Similarity=0.336  Sum_probs=202.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +||++|||||++|||+++|++|+++|++|++++|+++.+++..+++       ++.++.+|++|+++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6999999999999999999999999999999999988877766544       256789999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchhhhh
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      ++|+||||||....         ++|++.+++|+.+++.+++.++|.|.++.  ..|+||++||..+..+.++..+|++|
T Consensus        82 ~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            99999999998632         46899999999999999999999997743  24899999999999999999999999


Q ss_pred             HHHHHHHHHH--HHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          167 KEAIIGLARS--TACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       167 K~a~~~l~~~--l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      |+|+.+|+|+  |+.|++++|||||+|+||+++|+++...........  .++..+.....   +|++|+++|||+|+++
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~~~~~~---~p~~r~~~pedvA~~v  227 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQ--YIEYKDHIKDM---IKYYGILDPPLIANGL  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGG--GGGGHHHHHHH---HHHHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccc--cHHHHHHHHhc---CCCCCCcCHHHHHHHH
Confidence            9999999997  688999999999999999999999876542211110  11111222222   2568999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccCc
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      +||+|++  ++||++|.+|||+++--
T Consensus       228 ~fL~s~~--~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         228 ITLIEDD--ALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTEEEE
T ss_pred             HHHHcCC--CCCCCEEEECCCCeeec
Confidence            9999864  69999999999987643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-50  Score=347.23  Aligned_cols=231  Identities=29%  Similarity=0.390  Sum_probs=203.2

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec---------chHHHHHHHhhhC--CeEEEecCCCHHHHHHH
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI---------LDELGAALASTIG--GRYIHCDVTKEEDVESA   79 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r---------~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~   79 (278)
                      ++++|+||++|||||++|||+++|++|+++|++|+++++         .++.++++.++++  ...+.+|+++.++++++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence            456899999999999999999999999999999999854         3445555554432  45678999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      ++++.+++|+||+||||||+. ...++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC
Confidence            999999999999999999987 457899999999999999999999999999999999876 799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHH
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIED  239 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  239 (278)
                      ...|++||+|+.+|+++++.|++++|||||+|+||.+.|++...           .+++.            .+..+|||
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~-----------~~~~~------------~~~~~Ped  215 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV-----------MPEDL------------VEALKPEY  215 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG-----------SCHHH------------HHHSCGGG
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc-----------CcHhh------------HhcCCHHH
Confidence            99999999999999999999999999999999999998776432           12221            23458999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +|++++||||+.+ ++||++|.+|||+.
T Consensus       216 vA~~v~fL~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         216 VAPLVLWLCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             THHHHHHHTSTTC-CCCSCEEEEETTEE
T ss_pred             HHHHHHHHcCCCc-CCCCcEEEeCCCce
Confidence            9999999998665 78999999999975

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.4e-49  Score=331.37  Aligned_cols=224  Identities=24%  Similarity=0.286  Sum_probs=201.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCe-------EEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAH-------IVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~-------Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +++|||||++|||+++|++|+++|++       |++++|+++.++++.+++.     +.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999998       8899999988887766542     56789999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      +||++|+||||||+. ...++.+.+.++|++.|++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++
T Consensus        82 ~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccc-cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHHH
Confidence            999999999999987 557899999999999999999999999999999999866 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      ||+|+.+|+++++.|++++|||||+|+||+++|+++....          .+            ...++.+|||+|++++
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~----------~~------------~~~~~~~PedvA~~v~  217 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD----------DE------------MQALMMMPEDIAAPVV  217 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC----------ST------------TGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC----------Hh------------hHhcCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999864321          00            1245779999999999


Q ss_pred             HhccCCCCCceee-EEeecCC
Q 023708          246 FLASEEAGFITAH-NLVIDGG  265 (278)
Q Consensus       246 ~l~s~~~~~~tG~-~i~~dgG  265 (278)
                      ||+++++++++|+ .+..+||
T Consensus       218 ~l~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         218 QAYLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             HHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHcCCccCccCCEEEEecCC
Confidence            9999998998887 4557776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.9e-49  Score=340.75  Aligned_cols=249  Identities=27%  Similarity=0.336  Sum_probs=214.3

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      .+.++.+|+++.++++++++.+.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            35899999999999999999999999999999999999987776655433      256788999999999999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                      +++++|+||||||.. ...++.+.+.++|++.+.+|+.+++.+.+.+.+.+......+.+++++|..+..+.++..+|++
T Consensus       100 ~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         100 VAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             HTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hccccchhhhhhhhc-cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            999999999999986 5568899999999999999999999999999888877666788999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAAL  245 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  245 (278)
                      +|+|+++|+|.++.|++++|||||+|+||+++|++......       ...........   ..|++|+++|||+|++++
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~~~~~~~---~~pl~R~~~pediA~~v~  248 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD-------PTGTFEKEMIG---RIPCGRLGTVEELANLAA  248 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC-------TTSHHHHHHHT---TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC-------CcHHHHHHHhh---cCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998765331       11222233322   347899999999999999


Q ss_pred             HhccCCCCCceeeEEeecCCcccCcC
Q 023708          246 FLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       246 ~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                      ||+++.++|+||++|.+|||+++...
T Consensus       249 fL~sd~s~~itG~~i~vDGG~~l~~~  274 (294)
T d1w6ua_         249 FLCSDYASWINGAVIKFDGGEEVLIS  274 (294)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHHHH
T ss_pred             HHhCchhcCCCCcEEEECCChhheeC
Confidence            99999999999999999999885443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-49  Score=329.96  Aligned_cols=238  Identities=26%  Similarity=0.308  Sum_probs=204.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.       +.++.||++++++++++++++.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3889999999999999999999999999999999999988887765542       567899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhcC--CCCCchh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIMG--GLASHAY  163 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~--~~~~~~Y  163 (278)
                      +|+||+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++.+ +.|+||++||.++...  .++...|
T Consensus        87 ~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y  165 (257)
T d1xg5a_          87 HSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  165 (257)
T ss_dssp             HCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             cCCCCEEEeccccc-CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHH
Confidence            99999999999986 557899999999999999999999999999999998744 3689999999998754  4556679


Q ss_pred             hhhHHHHHHHHHHHHHHH--CCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 023708          164 SLSKEAIIGLARSTACEL--GKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  241 (278)
                      +++|+++.+|+|+|+.|+  +++||+||+|+||.++|++......       ..++.   ....   .|.+|+++|||+|
T Consensus       166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~-------~~~~~---~~~~---~~~~r~~~pedvA  232 (257)
T d1xg5a_         166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-------KDPEK---AAAT---YEQMKCLKPEDVA  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-------TCHHH---HHHH---HC---CBCHHHHH
T ss_pred             HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh-------hhHHH---HHhc---CCCCCCcCHHHHH
Confidence            999999999999999998  7889999999999999999876431       11222   2222   2669999999999


Q ss_pred             HHHHHhccCCCCCceeeEEeecCC
Q 023708          242 QAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       242 ~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      ++++||+|+++.|+|||++.-++|
T Consensus       233 ~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         233 EAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHhCChhcCeECCEEEEeCC
Confidence            999999999999999997665555

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-46  Score=316.64  Aligned_cols=239  Identities=21%  Similarity=0.205  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHH---cCCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAE---NGAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~---~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~   82 (278)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++       ++.++.||+++++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999997   7999999999998888776654       256789999999999999999


Q ss_pred             HHhh----cCCccEEEECCccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC-CCcEEEEecCchhhc
Q 023708           83 AVSW----KGQLDIMFNNAGISGS--GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ-RKGSIICTSSSAAIM  155 (278)
Q Consensus        83 ~~~~----~g~id~li~nag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~  155 (278)
                      +.+.    ++.+|++|||||....  ..++.+.+.++|++.|++|+.++++++++++|+|.+++ ..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    4578999999997643  45688999999999999999999999999999998753 257999999999999


Q ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCC
Q 023708          156 GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSA  235 (278)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
                      +.+++..|++||+|+++|+++|+.|  .+|||||+|+||+++|++........     ..++....+....   +.+|+.
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~-----~~~~~~~~~~~~~---~~~r~~  231 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETS-----KDPELRSKLQKLK---SDGALV  231 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHC-----SCHHHHHHHHHHH---HTTCSB
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcC-----CCHHHHHHHHhcC---CCCCCC
Confidence            9999999999999999999999999  56999999999999999987654321     1333333333322   458999


Q ss_pred             CHHHHHHHHHHhccCCCCCceeeEEee
Q 023708          236 SIEDVAQAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       236 ~~edva~~~~~l~s~~~~~~tG~~i~~  262 (278)
                      +|+|+|+++++|+++ +.|+||++|++
T Consensus       232 ~p~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         232 DCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             CHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             CHHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            999999999999985 57999999986

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-45  Score=307.07  Aligned_cols=235  Identities=33%  Similarity=0.450  Sum_probs=199.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG--GRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++  .....+|+.+.+.+++..+++...++.+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence            47899999999999999999999999999999999999888888877765  4567899999999999999999999999


Q ss_pred             cEEEECCccCCC-----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecCchhhcCCCCC
Q 023708           91 DIMFNNAGISGS-----GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLAS  160 (278)
Q Consensus        91 d~li~nag~~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~~~  160 (278)
                      |.+++|+++...     ..++.+.+.++|++.+++|+.+++++++++.|+|..+     .+.|+||++||..+..+.++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  160 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  160 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc
Confidence            999999876532     2356788899999999999999999999999998753     236899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCC-CCCCCCHHH
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLL-RGRSASIED  239 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ed  239 (278)
                      .+|++||+|+++|+|+++.|++++|||||+|+||+++|++.....           ++..+.....  .| .+|+++|||
T Consensus       161 ~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~-----------~~~~~~~~~~--~pl~~R~g~pee  227 (248)
T d2o23a1         161 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP-----------EKVCNFLASQ--VPFPSRLGDPAE  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------------CHHHHT--CSSSCSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC-----------HHHHHHHHhc--CCCCCCCcCHHH
Confidence            999999999999999999999999999999999999999876532           2222222222  24 389999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEee
Q 023708          240 VAQAALFLASEEAGFITAHNLVI  262 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~  262 (278)
                      ||++++||++  ++|+|||+|.|
T Consensus       228 vA~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         228 YAHLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHHHHh--CCCCCceEeEC
Confidence            9999999996  57999999975

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.9e-46  Score=314.81  Aligned_cols=232  Identities=19%  Similarity=0.193  Sum_probs=190.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh---h---hCCeEEEecCC-CHHHHHHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS---T---IGGRYIHCDVT-KEEDVESAVRLAVS   85 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~---~---~~~~~~~~D~~-~~~~i~~~~~~~~~   85 (278)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+++.+   .   .++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999998776544333322   1   12667899998 67789999999999


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC--CCcEEEEecCchhhcCCCCCchh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ--RKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      ++|+||+||||||...         .++|++.+++|++++++++++++|.|.+++  ..|+||++||..+..+.+++.+|
T Consensus        81 ~~g~iDilvnnAG~~~---------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QLKTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHSCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HcCCCCEEEeCCCCCC---------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            9999999999999642         377899999999999999999999997642  36899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+.+|+++|+.|++++|||||+|+||+++|++.+...    ......+. ..+..      ..++..+||++|+.
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~----~~~~~~~~-~~~~~------~~~~~~~~e~va~~  220 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN----SWLDVEPR-VAELL------LSHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC----CGGGSCTT-HHHHH------TTSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc----cchhHHHH-HHhcc------ccCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999865321    11111111 11111      12456789999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      ++++.+..   .||+.|.+|||+.
T Consensus       221 ~~~~~~~~---~tG~vi~vdgG~l  241 (254)
T d1sbya1         221 FVKAIEAN---KNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHHHHC---CTTCEEEEETTEE
T ss_pred             HHHhhhCC---CCCCEEEECCCEe
Confidence            98887543   5999999999974

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-45  Score=319.65  Aligned_cols=248  Identities=17%  Similarity=0.150  Sum_probs=196.5

Q ss_pred             CCcEEEEeC--CCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh----hC-------------CeEE----------
Q 023708           16 TGKVAVITG--GARGIGAATAKLFAENGAHIVIADILDELGAALAST----IG-------------GRYI----------   66 (278)
Q Consensus        16 ~~k~vlVtG--as~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~----~~-------------~~~~----------   66 (278)
                      ++|++||||  +++|||++||+.|+++|++|+++++...........    ..             ....          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  568999999999999999999998875443332211    00             0112          


Q ss_pred             ----------EecCCCHHHHHHHHHHHHhhcCCccEEEECCccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 023708           67 ----------HCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGS-GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKA  135 (278)
Q Consensus        67 ----------~~D~~~~~~i~~~~~~~~~~~g~id~li~nag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  135 (278)
                                .+|+++.++++++++++.+.||+||+||||+|.... .+++.+.+.++|.+.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      246778889999999999999999999999997643 357899999999999999999999999999999


Q ss_pred             HHccCCCcEEEEecCchhhcCCCC-CchhhhhHHHHHHHHHHHHHHHCC-CCcEEEEecCCCCCChhhHHH---------
Q 023708          136 MIEGQRKGSIICTSSSAAIMGGLA-SHAYSLSKEAIIGLARSTACELGK-HGIRVNCISPHGVPSEMLVNA---------  204 (278)
Q Consensus       136 ~~~~~~~~~iv~vsS~~~~~~~~~-~~~Y~~sK~a~~~l~~~l~~e~~~-~~i~v~~v~pG~v~t~~~~~~---------  204 (278)
                      |.+   .|+||++||..+..+.|+ ...|+++|+++++|+|+++.||++ +|||||+|+||+++|+....+         
T Consensus       161 m~~---~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         161 MKP---QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccc---ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            965   589999999999998886 567999999999999999999986 699999999999999432210         


Q ss_pred             -------------------------HHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeE
Q 023708          205 -------------------------YRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHN  259 (278)
Q Consensus       205 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~  259 (278)
                                               ............++.......  ..|++|+++|||||++++||+|+.++|+|||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~  315 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK--YAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHH--HSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhc--cCCCCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence                                     000000111112222222222  23789999999999999999999999999999


Q ss_pred             EeecCCccc
Q 023708          260 LVIDGGYTT  268 (278)
Q Consensus       260 i~~dgG~~~  268 (278)
                      |.+|||+++
T Consensus       316 i~VDGG~~~  324 (329)
T d1uh5a_         316 IYVDNGLNI  324 (329)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCccc
Confidence            999999974

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-45  Score=308.37  Aligned_cols=243  Identities=19%  Similarity=0.239  Sum_probs=206.0

Q ss_pred             CCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHHHHHHh---h-hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAALAS---T-IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~---~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+.+   . ....++.+|+++..++.+.++++.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            47899999999998  89999999999999999999998654443322   2 236778899999999999999999999


Q ss_pred             CCccEEEECCccCCCCC----CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchh
Q 023708           88 GQLDIMFNNAGISGSGG----SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAY  163 (278)
Q Consensus        88 g~id~li~nag~~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y  163 (278)
                      +++|++|||++......    .......+.|...+++|+.+.+.+++.+.+.+.+   .+.||++||..+..+.+....|
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~~~~~~~Y  158 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVM  158 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccCCCCcHHH
Confidence            99999999998753221    2345667889999999999999999999998855   4689999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++.....         ..+...+....  ..|++|+++|||+|++
T Consensus       159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---------~~~~~~~~~~~--~~pl~R~~~peeia~~  227 (258)
T d1qsga_         159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK---------DFRKMLAHCEA--VTPIRRTVTIEDVGNS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST---------THHHHHHHHHH--HSTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc---------hhhhHHHHHHh--CCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999875432         22222222222  2378999999999999


Q ss_pred             HHHhccCCCCCceeeEEeecCCcccCc
Q 023708          244 ALFLASEEAGFITAHNLVIDGGYTTGT  270 (278)
Q Consensus       244 ~~~l~s~~~~~~tG~~i~~dgG~~~~~  270 (278)
                      ++||+++...|+||++|.+|||+++..
T Consensus       228 v~fL~s~~s~~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         228 AAFLCSDLSAGISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHhCchhcCccCceEEECcCHHHhc
Confidence            999999999999999999999998653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.5e-44  Score=308.38  Aligned_cols=237  Identities=25%  Similarity=0.245  Sum_probs=188.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-hHHHHHHHhhhC-----------------------CeEEEecCCCH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADIL-DELGAALASTIG-----------------------GRYIHCDVTKE   73 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-~~~~~~~~~~~~-----------------------~~~~~~D~~~~   73 (278)
                      -++|||||++|||+++|++|+++|++|++++++ ++..+++.+++.                       ...+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            479999999999999999999999999998764 444444443321                       12345679999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHH--------------HHHHHHhHHHHHHHHHHHHHHHc-
Q 023708           74 EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVK--------------FLLSVNLNGILHGIKHAAKAMIE-  138 (278)
Q Consensus        74 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~--------------~~~~~N~~~~~~l~~~~~~~~~~-  138 (278)
                      ++++++++++.+++|+||+||||||.... .++.+.+.++|+              ..|.+|+.+++++++.+.+.+.. 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP-TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC-CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999999999999998643 566666655543              57999999999999999988642 


Q ss_pred             ----cCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCC
Q 023708          139 ----GQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM  214 (278)
Q Consensus       139 ----~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~  214 (278)
                          +...++||+++|.....+.++..+|++||+|+.+|+|++++||+++|||||+|+||++.+....            
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~------------  229 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM------------  229 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS------------
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC------------
Confidence                2336789999999999999999999999999999999999999999999999999986654321            


Q ss_pred             CHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          215 KPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +++..+......+  +.+|+++|||+|++++||+|++++|+||++|.+|||+++.
T Consensus       230 ~~~~~~~~~~~~p--l~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         230 PPAVWEGHRSKVP--LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             CHHHHHHHHTTCT--TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            3333333333221  2489999999999999999999999999999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=307.29  Aligned_cols=215  Identities=25%  Similarity=0.308  Sum_probs=191.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-----CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.     +.++.||++|.++++++++++.++
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999999998888766543     678899999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhh
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLS  166 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  166 (278)
                      +|++|+||||||.. ...++.+.+.++|++.+++|++++++++++++|.|.+++ .|+||++||..+..+.+++.+|++|
T Consensus        82 ~g~idilinnag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~as  159 (244)
T d1yb1a_          82 IGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSS  159 (244)
T ss_dssp             TCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             cCCCceeEeecccc-ccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHH
Confidence            99999999999987 446788899999999999999999999999999999876 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC---CCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 023708          167 KEAIIGLARSTACELGK---HGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQA  243 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  243 (278)
                      |+|+.+|+++|+.|+++   +||+|++|+||+++|++.+...           .            +..+..+|||+|+.
T Consensus       160 Kaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~-----------~------------~~~~~~~pe~va~~  216 (244)
T d1yb1a_         160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS-----------T------------SLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-----------H------------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-----------c------------cccCCCCHHHHHHH
Confidence            99999999999999865   5899999999999999864311           0            12457799999999


Q ss_pred             HHHhccCC
Q 023708          244 ALFLASEE  251 (278)
Q Consensus       244 ~~~l~s~~  251 (278)
                      ++..+..+
T Consensus       217 i~~~~~~~  224 (244)
T d1yb1a_         217 LMHGILTE  224 (244)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            98876444

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2e-44  Score=309.59  Aligned_cols=247  Identities=23%  Similarity=0.175  Sum_probs=196.9

Q ss_pred             ccCCCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-----------------CeEEEec--
Q 023708           11 SSKRLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDELGAALASTIG-----------------GRYIHCD--   69 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-----------------~~~~~~D--   69 (278)
                      ++.+|+||++|||||++  |||+++|++|+++|++|++++|+............                 .....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            35689999999999875  99999999999999999999987543332211100                 0122333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhhcCCccEEEECCccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHH
Q 023708           70 ------------------VTKEEDVESAVRLAVSWKGQLDIMFNNAGISG-SGGSITSLNMEDVKFLLSVNLNGILHGIK  130 (278)
Q Consensus        70 ------------------~~~~~~i~~~~~~~~~~~g~id~li~nag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  130 (278)
                                        .++..+++++++++.++||+||+||||||... ...++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              34556778999999999999999999999753 24678999999999999999999999999


Q ss_pred             HHHHHHHccCCCcEEEEecCchhhc-CCCCCchhhhhHHHHHHHHHHHHHHHC-CCCcEEEEecCCCCCChhhHHHHHhh
Q 023708          131 HAAKAMIEGQRKGSIICTSSSAAIM-GGLASHAYSLSKEAIIGLARSTACELG-KHGIRVNCISPHGVPSEMLVNAYRKY  208 (278)
Q Consensus       131 ~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~Y~~sK~a~~~l~~~l~~e~~-~~~i~v~~v~pG~v~t~~~~~~~~~~  208 (278)
                      ++++.+.+   .++++++++..... ..+....|+++|+++.++++.++.+++ ++|||||+|+||+++|++.....   
T Consensus       162 ~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~---  235 (297)
T d1d7oa_         162 HFLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG---  235 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS---
T ss_pred             HHHHHhhc---CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc---
Confidence            99998866   45677777766554 456677899999999999999999996 57999999999999999864321   


Q ss_pred             hccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccCcC
Q 023708          209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTS  271 (278)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~~~  271 (278)
                            ..++..+....  ..|++|+++|||||++++||+|+.++|+|||+|.+|||++....
T Consensus       236 ------~~~~~~~~~~~--~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~  290 (297)
T d1d7oa_         236 ------FIDTMIEYSYN--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             ------HHHHHHHHHHH--HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             ------CCHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCC
Confidence                  12222222222  23789999999999999999999999999999999999985433

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-44  Score=307.27  Aligned_cols=240  Identities=21%  Similarity=0.228  Sum_probs=186.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEE---ecch---HHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIA---DILD---ELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~---~r~~---~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|++|||||++|||+++|+.|+++|++|+.+   .|+.   +.+.+..+.+     ++.++.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5899999999999999999999999986654   4432   2333333332     267889999999999999988743


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhh
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL  165 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  165 (278)
                        |++|+||||||.. ...++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.++...|++
T Consensus        82 --g~idilvnnag~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccc-ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHH
Confidence              7899999999986 557889999999999999999999999999999999866 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhcc-CCCCHHHHH---HHHhhcCCCCCCCCCCHHHHH
Q 023708          166 SKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGK-ADMKPEEVC---KMVRDSGSLLRGRSASIEDVA  241 (278)
Q Consensus       166 sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~edva  241 (278)
                      ||+|+++|+++|+.|++++||+||+|+||+++|++.........+. ...+.+...   +........+.++..+|||||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            9999999999999999999999999999999999987654211100 001111111   222222223446788999999


Q ss_pred             HHHHHhccCC---CCCceeeEE
Q 023708          242 QAALFLASEE---AGFITAHNL  260 (278)
Q Consensus       242 ~~~~~l~s~~---~~~~tG~~i  260 (278)
                      +++++++..+   .+|++|+.+
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHhCCCCCeEEecHHHH
Confidence            9999998644   467777643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.2e-43  Score=290.93  Aligned_cols=231  Identities=29%  Similarity=0.366  Sum_probs=192.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .|++|||||++|||+++|++|+++|++|++++|+++.       .+...+++|+++......+.+...+.. ..+.++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~   72 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFAVVSA   72 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccc-cccchhhh
Confidence            4899999999999999999999999999999998642       245678999999999999988877765 45555666


Q ss_pred             CccCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc-----CCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           97 AGISGS---GGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG-----QRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        97 ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      ++....   .......+.+.|++.+++|+.+++.+++.+.+.+.+.     ++.|+||++||..+..+.++..+|+++|+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  152 (241)
T d1uaya_          73 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKG  152 (241)
T ss_dssp             CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             hhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHH
Confidence            654322   2345667889999999999999999999999986432     23689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      |+++|+|+++.|++++|||||+|+||+++|++.....          ...........+  +.+|+++|||+|++++||+
T Consensus       153 al~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~----------~~~~~~~~~~~~--~~~R~g~pedvA~~v~fL~  220 (241)
T d1uaya_         153 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----------EKAKASLAAQVP--FPPRLGRPEEYAALVLHIL  220 (241)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----------HHHHHHHHTTCC--SSCSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh----------hhHHHHHHhcCC--CCCCCcCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999876532          222233333221  3489999999999999999


Q ss_pred             cCCCCCceeeEEeecCCcccC
Q 023708          249 SEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       249 s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      |  ++|+||++|.+|||+++.
T Consensus       221 s--~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         221 E--NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             H--CTTCCSCEEEESTTCCCC
T ss_pred             h--CCCCCCCEEEECCcccCC
Confidence            7  469999999999999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=3.7e-43  Score=298.33  Aligned_cols=242  Identities=19%  Similarity=0.215  Sum_probs=190.2

Q ss_pred             CCCCcEEEEeCCCC--hhHHHHHHHHHHcCCeEEEEecchH---HHHHHHhhh-CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           14 RLTGKVAVITGGAR--GIGAATAKLFAENGAHIVIADILDE---LGAALASTI-GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        14 ~l~~k~vlVtGas~--giG~~ia~~L~~~g~~Vi~~~r~~~---~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      -|+||++|||||++  |||+++|++|+++|++|++++|+++   ..+++.+.. ...++.+|++++++++++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            37899999999865  9999999999999999999999864   333333332 36678999999999999999999999


Q ss_pred             CCccEEEECCccCCCCC---CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhh
Q 023708           88 GQLDIMFNNAGISGSGG---SITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYS  164 (278)
Q Consensus        88 g~id~li~nag~~~~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  164 (278)
                      |++|++|||+|......   .+.+...+.+...+.++..+.+.+.+...+.+   +..+.|+++++.....+.+....|+
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~s~~~~~~~~~~~~~y~  158 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL---NNGASVLTLSYLGSTKYMAHYNVMG  158 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc---ccCcceeeecccccccccccchhhh
Confidence            99999999999764422   33344445555555555555555544444332   2234677777777788888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 023708          165 LSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAA  244 (278)
Q Consensus       165 ~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  244 (278)
                      ++|+|+.+++|+++.|++++|||||+|+||+++|++.....         +.++........  .|.+|+++|||||+++
T Consensus       159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~---------~~~~~~~~~~~~--~p~~r~~~pedIA~~v  227 (274)
T d2pd4a1         159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA---------DFRMILKWNEIN--APLRKNVSLEEVGNAG  227 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST---------THHHHHHHHHHH--STTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC---------chHHHHHHHhhh--hhccCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999875432         223333333222  3679999999999999


Q ss_pred             HHhccCCCCCceeeEEeecCCcccC
Q 023708          245 LFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       245 ~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +||+|+...|+||++|.+|||++..
T Consensus       228 ~fL~S~~s~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         228 MYLLSSLSSGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhChhhCCCcCceEEECCChhhc
Confidence            9999999999999999999999854

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.9e-42  Score=292.98  Aligned_cols=250  Identities=19%  Similarity=0.141  Sum_probs=202.1

Q ss_pred             CCCCcEEEEeCC--CChhHHHHHHHHHHcCCeEEEEecchHHH-HHHHhhhC--CeEEEecCCCHHHHHHHHHHHHhhc-
Q 023708           14 RLTGKVAVITGG--ARGIGAATAKLFAENGAHIVIADILDELG-AALASTIG--GRYIHCDVTKEEDVESAVRLAVSWK-   87 (278)
Q Consensus        14 ~l~~k~vlVtGa--s~giG~~ia~~L~~~g~~Vi~~~r~~~~~-~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~-   87 (278)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|++++. +++.+..+  ...++||++++++++++++.+.+.+ 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            478999999995  57999999999999999999999987665 44555444  5678999999999999999987764 


Q ss_pred             --CCccEEEECCccCC----CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCc
Q 023708           88 --GQLDIMFNNAGISG----SGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASH  161 (278)
Q Consensus        88 --g~id~li~nag~~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  161 (278)
                        +++|++|||+|...    ...++.+.+.++|.+.+++|+.+.+...+.+.+.+.    .+.+++++|.....+.|++.
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN----PGGSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE----EEEEEEEEECCCSSCCTTTH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc----cccccccccccccccCcccc
Confidence              67999999999653    233567899999999999999999998888776542    34567777778888889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCC-CHHHHHHHHhhcCCCCCC-CCCCHHH
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADM-KPEEVCKMVRDSGSLLRG-RSASIED  239 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ed  239 (278)
                      .|+++|+|+.+|+++++.|++++|||||+|+||.++|++.............. ..+...+.....  .|++ |+++|+|
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pl~rr~~~p~d  236 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR--APIGWNMKDATP  236 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH--CTTCCCTTCCHH
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhc--CCCCCCCCCHHH
Confidence            99999999999999999999999999999999999999987765322211100 011122222222  3555 4999999


Q ss_pred             HHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          240 VAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       240 va~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      +|+++.||+|+...|+||++|.+|||++.+
T Consensus       237 va~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         237 VAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            999999999999999999999999999764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.1e-42  Score=287.81  Aligned_cols=222  Identities=19%  Similarity=0.149  Sum_probs=182.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHH---HcCCeEEEEecchHHHHHHHhh----hCCeEEEecCCCHHHHHHHHHHHHh--hc
Q 023708           17 GKVAVITGGARGIGAATAKLFA---ENGAHIVIADILDELGAALAST----IGGRYIHCDVTKEEDVESAVRLAVS--WK   87 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~---~~g~~Vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~--~~   87 (278)
                      .|+||||||++|||+++|++|+   ++|++|++++|+++.++++.+.    .++.++.||++|+++++++++++.+  .+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            4899999999999999999996   5799999999988766655432    2477899999999999999999854  67


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC----------CCcEEEEecCchhhc--
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ----------RKGSIICTSSSAAIM--  155 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~~~iv~vsS~~~~~--  155 (278)
                      +++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|+++.          ..+++|+++|..+..  
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            89999999999876767788999999999999999999999999999998631          258999999998764  


Q ss_pred             -CCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          156 -GGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       156 -~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                       +.+++.+|++||+|+.+|+++++.|++++||+||+|+||+++|++.....                        |    
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~------------------------~----  213 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA------------------------P----  213 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC------------------------S----
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC------------------------C----
Confidence             45567799999999999999999999999999999999999999864210                        1    


Q ss_pred             CCHHHHHHHHHHhccCCCCCceeeEEeecCCc
Q 023708          235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ..+++.++.++.++.......+|+.|.+||+.
T Consensus       214 ~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         214 LDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             BCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CCchHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            13333344444444333345689999999974

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=3.5e-41  Score=284.68  Aligned_cols=237  Identities=27%  Similarity=0.296  Sum_probs=187.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-HHHHHhhh----C--CeEEEecC----CCHHHHHHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-GAALASTI----G--GRYIHCDV----TKEEDVESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-~~~~~~~~----~--~~~~~~D~----~~~~~i~~~~~~~~~~   86 (278)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++    .  ...+.+|+    +.++.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999987543 34443332    2  33444444    4467788889999999


Q ss_pred             cCCccEEEECCccCCCCCC----------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcc----CCCcEEEEecCch
Q 023708           87 KGQLDIMFNNAGISGSGGS----------ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEG----QRKGSIICTSSSA  152 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~----------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~vsS~~  152 (278)
                      +|++|+||||||+......          ..+.....+...+..|+.+++...+...+.+...    ...+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999998643221          1223345677889999999999888888876442    2257888999999


Q ss_pred             hhcCCCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCC
Q 023708          153 AIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRG  232 (278)
Q Consensus       153 ~~~~~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
                      +..+.++...|++||+++++|+|+++.|++++|||||+|+||+++|++..            +.+..+.....   .|++
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~------------~~~~~~~~~~~---~pl~  226 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM------------PQETQEEYRRK---VPLG  226 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS------------CHHHHHHHHTT---CTTT
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC------------CHHHHHHHHhc---CCCC
Confidence            99999999999999999999999999999999999999999999988643            22222333322   3555


Q ss_pred             C-CCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          233 R-SASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       233 ~-~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      | .++|||+|++++||+|++..|+||++|.+|||++++
T Consensus       227 r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         227 QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            4 589999999999999999999999999999999986

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.5e-43  Score=289.51  Aligned_cols=228  Identities=14%  Similarity=0.140  Sum_probs=193.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~l   93 (278)
                      +||++|||||++|||+++|+.|+++|++|+++++.+...     ......+.+|.++.++.+.+.+++.+.++  ++|+|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            589999999999999999999999999999998865321     11223556788888888888888877644  79999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHH
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGL  173 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l  173 (278)
                      |||||......+..+.+.++|++.+++|+.++++++++++|+|++   .|+||++||.++..+.++..+|++||+|+++|
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  152 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQL  152 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCccCCcccHHHHHHHHHH
Confidence            999997655566778888999999999999999999999999965   58999999999999999999999999999999


Q ss_pred             HHHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          174 ARSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       174 ~~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +++++.|++  ++||+||+|+||+++|++.+.....                     .+.+++.+|||+|+.+++|+++.
T Consensus       153 t~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~---------------------~~~~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         153 CQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE---------------------ADFSSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             HHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT---------------------SCGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc---------------------chhhcCCCHHHHHHHHHHHhCCC
Confidence            999999998  5799999999999999987643210                     02256778999999999999999


Q ss_pred             CCCceeeEEee--cCCcccCcCc
Q 023708          252 AGFITAHNLVI--DGGYTTGTSS  272 (278)
Q Consensus       252 ~~~~tG~~i~~--dgG~~~~~~~  272 (278)
                      ..+++|+.+.+  ++|.+.-.|.
T Consensus       212 ~~~i~G~~i~v~~~~g~t~~~p~  234 (236)
T d1dhra_         212 KRPNSGSLIQVVTTDGKTELTPA  234 (236)
T ss_dssp             TCCCTTCEEEEEEETTEEEEEEE
T ss_pred             ccCCCCCeEEEEEECCEEEEEec
Confidence            99999987665  6777655554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-41  Score=285.45  Aligned_cols=222  Identities=20%  Similarity=0.210  Sum_probs=182.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh--CCeEEEecCCCHHHHHHHHHHHHhhcCC-
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI--GGRYIHCDVTKEEDVESAVRLAVSWKGQ-   89 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g~-   89 (278)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|++++++++.+..  +++++.+|+++.++++++++++.+.++. 
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            4569999999999999999999999996  6888999988888876654  3678999999999999999999998764 


Q ss_pred             -ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC----------CCcEEEEecCchhhcCC-
Q 023708           90 -LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ----------RKGSIICTSSSAAIMGG-  157 (278)
Q Consensus        90 -id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----------~~~~iv~vsS~~~~~~~-  157 (278)
                       +|+||||||+.....++.+.+.++|++.+++|+.|++++++.++|+|+++.          ..++++++++....... 
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence             999999999876667788999999999999999999999999999997632          13689999887765433 


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCC
Q 023708          158 ------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR  231 (278)
Q Consensus       158 ------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (278)
                            .+..+|++||+|+.+|+++++.|++++||+||+|+||+++|+|....                           
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~---------------------------  213 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN---------------------------  213 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC---------------------------
Confidence                  23457999999999999999999999999999999999999986421                           


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCceeeEEeecC
Q 023708          232 GRSASIEDVAQAALFLASEEAGFITAHNLVIDG  264 (278)
Q Consensus       232 ~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dg  264 (278)
                       ...+|||.++.++..+.......+|..|..||
T Consensus       214 -~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         214 -AALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             -CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence             13478999999998887766678999998886

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-42  Score=291.40  Aligned_cols=212  Identities=22%  Similarity=0.272  Sum_probs=182.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAEN-GAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~-g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++|||||++|||+++|++|+++ |++|++++|++++++++.+++     ++.++.||++|.++++++++++.+++|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            56699999999999999999986 899999999998888776654     378899999999999999999999999999


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC---------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---------------  156 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------  156 (278)
                      +||||||+.. ..+..+.+.++|++.|++|+++++++++.++|.|++   .|+||+++|..+..+               
T Consensus        84 iLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          84 VLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhccc
Confidence            9999999874 456677788999999999999999999999999965   589999999876432               


Q ss_pred             --------------------------CCCCchhhhhHHHHHHHHHHHHHHHCC----CCcEEEEecCCCCCChhhHHHHH
Q 023708          157 --------------------------GLASHAYSLSKEAIIGLARSTACELGK----HGIRVNCISPHGVPSEMLVNAYR  206 (278)
Q Consensus       157 --------------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~----~~i~v~~v~pG~v~t~~~~~~~~  206 (278)
                                                ..+...|++||+++..|++.++++|++    .||+||+|+||+++|+|...   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~---  236 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  236 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC---
Confidence                                      122357999999999999999999865    59999999999999998532   


Q ss_pred             hhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc--cCCCCCceeeEEe
Q 023708          207 KYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA--SEEAGFITAHNLV  261 (278)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~--s~~~~~~tG~~i~  261 (278)
                                               ....+|||+|+.+++++  +++..+.+|+.|.
T Consensus       237 -------------------------~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         237 -------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             -------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             -------------------------cccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                                     12347999999999986  4556678998886

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-39  Score=274.80  Aligned_cols=188  Identities=24%  Similarity=0.239  Sum_probs=172.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----C--CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----G--GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      |+||++||||||+|||+++|++|+++|++|++++|+++.++++.++.    +  ...+.+|+++.+.+..+.+++.+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999888776543    1  56778999999999999999999999


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHH
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKE  168 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  168 (278)
                      .+|+++||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|+++  .|++|++||.++..+.++..+|++||+
T Consensus        92 ~~~~li~nag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCC-CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccc-cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCCCchHHHHHHH
Confidence            999999999986 45678899999999999999999999999999999753  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCC--CCcEEEEecCCCCCChhhHHHH
Q 023708          169 AIIGLARSTACELGK--HGIRVNCISPHGVPSEMLVNAY  205 (278)
Q Consensus       169 a~~~l~~~l~~e~~~--~~i~v~~v~pG~v~t~~~~~~~  205 (278)
                      |+++|+++|+.|+++  .||+||+|+||+++|++.....
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~  207 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV  207 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence            999999999999974  5799999999999999987543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-40  Score=273.72  Aligned_cols=217  Identities=17%  Similarity=0.149  Sum_probs=181.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh--hcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS--WKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~g~id~li   94 (278)
                      .++||||||++|||+++|++|+++|++|++++|+++...     .....+.+|+.+.++.....+.+..  .+|+||+||
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            356799999999999999999999999999999864211     1123456788887877777777666  468999999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      ||||......+..+.+.++|+..+++|+.+++.++++++|+|++   .|+||++||..+..+.+++.+|++||+|+++|+
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~  153 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLT  153 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHH
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCCcccccchHHHHHHHHHHH
Confidence            99998655456667777899999999999999999999999965   589999999999999999999999999999999


Q ss_pred             HHHHHHHC--CCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH-hccCC
Q 023708          175 RSTACELG--KHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF-LASEE  251 (278)
Q Consensus       175 ~~l~~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~-l~s~~  251 (278)
                      ++++.|++  +.+|+||.|+||.++|++.+.....                     .+..++.+|+|+++.+++ +.++.
T Consensus       154 ~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~---------------------~~~~~~~~~~~va~~~~~~l~~~~  212 (235)
T d1ooea_         154 SSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN---------------------ADHSSWTPLSFISEHLLKWTTETS  212 (235)
T ss_dssp             HHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT---------------------CCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC---------------------CccccCCCHHHHHHHHHHHhcCcc
Confidence            99999998  4789999999999999987654310                     022457799999999875 55667


Q ss_pred             CCCceeeEEee
Q 023708          252 AGFITAHNLVI  262 (278)
Q Consensus       252 ~~~~tG~~i~~  262 (278)
                      ..++||+.+.+
T Consensus       213 ~~~~tG~~i~v  223 (235)
T d1ooea_         213 SRPSSGALLKI  223 (235)
T ss_dssp             GCCCTTCEEEE
T ss_pred             ccCCCceEEEE
Confidence            78899999988

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.1e-39  Score=272.38  Aligned_cols=219  Identities=28%  Similarity=0.365  Sum_probs=166.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh-cCCccEEEEC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW-KGQLDIMFNN   96 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~id~li~n   96 (278)
                      |++|||||++|||+++|++|+++|++|++++|+++.            ..+|+.+.+..+....+...+ .+.+|++|||
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~   69 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence            899999999999999999999999999999987531            457999999988887666654 4579999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh----------------------
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI----------------------  154 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~----------------------  154 (278)
                      ||+....        +.+.....+|..+...+.+...+.+.+.. .....++++....                      
T Consensus        70 Ag~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~  140 (257)
T d1fjha_          70 AGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR  140 (257)
T ss_dssp             CCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred             CCCCCcH--------HHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence            9975332        44678889999999999999999987754 4555555554322                      


Q ss_pred             -----cC-CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC
Q 023708          155 -----MG-GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS  228 (278)
Q Consensus       155 -----~~-~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (278)
                           .+ .++..+|++||+|+++|+|+++.||+++|||||+|+||+++|++....+..        ++..+.....  .
T Consensus       141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~~--~  210 (257)
T d1fjha_         141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--------PRYGESIAKF--V  210 (257)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------C--C
T ss_pred             eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--------HHHHHHHHhc--C
Confidence                 11 122446999999999999999999999999999999999999998765421        1111122221  2


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .|++|+++|||||++++||+|+.++|+||++|.+|||++
T Consensus       211 ~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            378999999999999999999999999999999999997

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.6e-30  Score=216.88  Aligned_cols=217  Identities=18%  Similarity=0.196  Sum_probs=162.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch---HHHHHHHhh---h--CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA-HIVIADILD---ELGAALAST---I--GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~---~~~~~~~~~---~--~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.++   .  ++.++.||++|.++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            57999999999999999999999999 588888863   222333222   2  2678899999999999999987665 


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++|.||||+|.. ...++.+.+.++|+..+++|+.+++++.+.+.    .. ..+++|++||..+..+.++...|+++|
T Consensus        88 ~~i~~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~-~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          88 VPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTR----EL-DLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             SCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TS-CCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             ccccccccccccc-cccccccccHHHHHHHhhhhccchhHHHHHhh----cc-CCceEeeecchhhccCCcccHHHHHHH
Confidence            5899999999987 45689999999999999999999998776432    32 368999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      ++++.|++.++    ..|+++++|+||.+.++.....             .....+...    --...+|+++++++..+
T Consensus       162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~-------------~~~~~~~~~----G~~~~~~~~~~~~l~~~  220 (259)
T d2fr1a1         162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG-------------PVADRFRRH----GVIEMPPETACRALQNA  220 (259)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC-------------------------CTTT----TEECBCHHHHHHHHHHH
T ss_pred             HhHHHHHHHHH----hCCCCEEECCCCcccCCccccc-------------hHHHHHHhc----CCCCCCHHHHHHHHHHH
Confidence            99998877665    4599999999999875533211             111111110    01246899999999998


Q ss_pred             ccCCCCCceeeEEeec
Q 023708          248 ASEEAGFITAHNLVID  263 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~d  263 (278)
                      +.....  ....+.+|
T Consensus       221 l~~~~~--~~~v~~~d  234 (259)
T d2fr1a1         221 LDRAEV--CPIVIDVR  234 (259)
T ss_dssp             HHTTCS--SCEECEEC
T ss_pred             HhCCCc--eEEEEeCc
Confidence            865432  23344444

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=9.3e-21  Score=165.26  Aligned_cols=222  Identities=16%  Similarity=0.087  Sum_probs=155.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-----HHHHHHh-----hhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDE-----LGAALAS-----TIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-----~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |+||||||+|.||.+++++|+++|++|++++|...     +.+.+..     ..++.++++|++|.+++.++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            89999999999999999999999999999998532     2222211     123678899999999999998864    


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------  156 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------  156 (278)
                       .+|+++|+|+......+.     ++.+..+++|+.++.++++++...-.+  +..++|++||...+-.           
T Consensus        78 -~~d~v~h~aa~~~~~~~~-----~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAVSF-----ESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             -CCSEEEECCCCCTTTTTT-----SCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             -CCCEEEEeecccccchhh-----hCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence             689999999976443333     556778999999999999987654322  2458999999775411           


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH-----HHHHhhhccCCCCHHHHHHHHhhcCC---
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV-----NAYRKYLGKADMKPEEVCKMVRDSGS---  228 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---  228 (278)
                      ..+...|+.||.+.+.+++.+++.+   ++++..++|+.+.+|...     ..+          ...+.........   
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i----------~~~~~~~~~~~~~~~~  216 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKI----------TRAIANIAQGLESCLY  216 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHH----------HHHHHHHHTTSCCCEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHH----------HHHHHHHHhCCCceEE
Confidence            1234579999999999999998886   688899998777665311     111          0111111111110   


Q ss_pred             ----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 ----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 ----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                          ...+.+..++|+++++..++...    .|+.+++..|..+
T Consensus       217 ~g~~~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         217 LGNMDSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             ECCCCeeecceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence                01234789999999999888643    3567787776654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=1.1e-21  Score=156.44  Aligned_cols=151  Identities=18%  Similarity=0.189  Sum_probs=112.5

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh----hCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST----IGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ..+|+||++|||||++|||+++++.|+++|++|++++|+.++.+++.+.    ..+.+..+|+++.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            4689999999999999999999999999999999999998887766554    34677889999999888765       


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-CCCCchhhhh
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-GLASHAYSLS  166 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~Y~~s  166 (278)
                      +++|+||||||..     +...+.++|+..+++|+.+.++.+..+.+.+....  .....+++.....+ ..+...|.++
T Consensus        91 ~~iDilin~Ag~g-----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 KGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             TTCSEEEECCCTT-----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             cCcCeeeecCccc-----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEeccCcCcHHHHHH
Confidence            4799999999863     34678899999999999888876655444333222  12222222221111 1123469999


Q ss_pred             HHHHHHHHHH
Q 023708          167 KEAIIGLARS  176 (278)
Q Consensus       167 K~a~~~l~~~  176 (278)
                      |+++..++++
T Consensus       164 k~a~~~l~~s  173 (191)
T d1luaa1         164 RACIAKLFES  173 (191)
T ss_dssp             HHHHHHHTSC
T ss_pred             HHHHHHHHhc
Confidence            9999887643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.79  E-value=1.1e-17  Score=147.16  Aligned_cols=169  Identities=16%  Similarity=0.076  Sum_probs=126.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch--------------------HHHHHHHhh--hCCeEEEecCCCHH
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD--------------------ELGAALAST--IGGRYIHCDVTKEE   74 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~--------------------~~~~~~~~~--~~~~~~~~D~~~~~   74 (278)
                      |++||||||+|.||.+++++|++.|++|++++...                    +........  .++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            68899999999999999999999999999986211                    111111111  24788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           75 DVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        75 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      .++++++..     ++|+|||.|+....  +....+.+.....+++|+.++.++++++...-    ...++++.||...+
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~--~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~----~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG----EECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC----TTCEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc--ccccccccccccccccccccccHHHHHHHHhc----cccceeeccccccc
Confidence            999998864     79999999986422  22345567778899999999999998877552    23567777776654


Q ss_pred             cC------------------------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          155 MG------------------------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       155 ~~------------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      ..                        ..+...|+.||.+.+.+++.+.+++   ++++..+.|+.+..+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~  215 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV  215 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECS
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCC
Confidence            21                        1223469999999999999988876   788888888766554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=2.4e-19  Score=154.99  Aligned_cols=227  Identities=14%  Similarity=0.079  Sum_probs=151.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      +||||||+|.||++++++|+++| ++|+++++.......+....++.++.+|+++.+++.+.+..      ++|+|||+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~------~~d~Vih~a   75 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK------KCDVVLPLV   75 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH------HCSEEEECB
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh------CCCcccccc
Confidence            48999999999999999999999 58998887655444444444578999999987766553321      599999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC------------------C
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL------------------A  159 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------------~  159 (278)
                      +.....     ...++....+++|+.++.++++++...      ..+++++||...+....                  +
T Consensus        76 ~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p  144 (342)
T d2blla1          76 AIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKP  144 (342)
T ss_dssp             CCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCG
T ss_pred             cccccc-----ccccCCccccccccccccccccccccc------cccccccccccccccccccccccccccccccccCCC
Confidence            975321     122445678999999999999987553      34677888777654321                  1


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------CCCCC
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------LLRGR  233 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  233 (278)
                      ...|+.||.+.+.+++.+++.+   |+++..++|..+..+................+.-..........      ...+.
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         145 RWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             cchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence            2469999999999999999887   68888887766654422111000000000001111122211110      01234


Q ss_pred             CCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          234 SASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       234 ~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      +..++|+++++..++........|+.+++.+|
T Consensus       222 ~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             ecccccccceeeeehhhccccCCCeEEEEecc
Confidence            78999999999999976555566899998544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.2e-18  Score=150.54  Aligned_cols=231  Identities=16%  Similarity=0.129  Sum_probs=154.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHH--HhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAAL--ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++|||||+|.||.+++++|+++|++|++++|.    .......  ....++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            49999999999999999999999999998652    2222222  22235889999999999999988752     6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------CCC
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------LAS  160 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~  160 (278)
                      |||+|+....     ..+.++..+.+++|+.++.++++++...-     ..++|++||.+.+.+.            ...
T Consensus        77 ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          77 VIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAAN-----VKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC-----CCEEEecCcceEEccccccccccccccCCCc
Confidence            9999986421     12234567899999999999999887652     4589999998876432            235


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCC----HHHHHHHHhhcCC--------
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMK----PEEVCKMVRDSGS--------  228 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------  228 (278)
                      ..|+.+|.+.+.+++....++  .++.+..++|+.+.++.....+.  .......    +.-.........+        
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMG--EDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSC--CCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCC--CCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            579999999999999887775  36788777776655442210000  0000000    0000111110000        


Q ss_pred             -----CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          229 -----LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       229 -----~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                           ...+.+..++|++.+...+.........++.+++.++..+
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence                 0113367889999887776654444566788998887654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.78  E-value=8.1e-19  Score=153.08  Aligned_cols=226  Identities=18%  Similarity=0.135  Sum_probs=155.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEE-Eecch-----HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVI-ADILD-----ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~-~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      +||||||+|.||++++++|++.|+.|++ +++..     +....+....++.++.+|++|.+++.++++..     .+|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            5899999999999999999999998655 44321     11222222234678899999999999988753     6999


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccC----CCcEEEEecCchhhcCC-----------
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQ----RKGSIICTSSSAAIMGG-----------  157 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~vsS~~~~~~~-----------  157 (278)
                      |||+|+....     ..+.++..+.+++|+.+..++++.+........    ...++|++||...+...           
T Consensus        77 VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          77 VMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             EEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             EEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999986422     222345677899999999999999988765311    13589999998866321           


Q ss_pred             ----------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC
Q 023708          158 ----------LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG  227 (278)
Q Consensus       158 ----------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (278)
                                .+...|+.||.+.+.+++.+...+   ++++..++|+.+.+|.....        .+-+.-+........
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~--------~~i~~~i~~~~~g~~  220 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--------KLIPLVILNALEGKP  220 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--------SHHHHHHHHHHHTCC
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC--------cHHHHHHHHHHcCCC
Confidence                      123469999999999999998876   68888898887766532100        000111222222211


Q ss_pred             C-C-----CCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          228 S-L-----LRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       228 ~-~-----~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      . +     ..+.+..++|+|+++..++....   .|..+++..|...
T Consensus       221 ~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         221 LPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             cEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence            1 0     11236799999999999986542   3677888776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=2.2e-18  Score=149.13  Aligned_cols=219  Identities=14%  Similarity=0.085  Sum_probs=144.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------C-CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI------G-GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~-~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .||+||||||+|.||.+++++|+++|++|+++.|+.+....+....      . ..++..|++|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4899999999999999999999999999999999876555443211      1 2346689999987777654       


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------  158 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------  158 (278)
                      .+|+++|+++.....        .+....+.+|+.++.++++.+...    +...++|++||..+.....          
T Consensus        83 ~~~~v~~~a~~~~~~--------~~~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhccccccc--------ccccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCCCCCccccc
Confidence            689999999864221        223456788999998888776553    2257999999976532111          


Q ss_pred             ---------------------CCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh---------HHHHHhh
Q 023708          159 ---------------------ASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML---------VNAYRKY  208 (278)
Q Consensus       159 ---------------------~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~---------~~~~~~~  208 (278)
                                           ....|+.+|.+.+.+++.+.+.+. .++++..++|+.+..+..         .......
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l  229 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL  229 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHH
Confidence                                 122599999999999999988875 468888887765543321         1111111


Q ss_pred             hccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCC
Q 023708          209 LGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG  265 (278)
                      . .....+..     ...   +.+.++.++|+|++++.++...  ...|+.+...++
T Consensus       230 ~-~g~~~~~~-----~~~---~~~~~v~v~Dva~~~i~~l~~~--~~~g~~~~~~~~  275 (342)
T d1y1pa1         230 F-NGEVSPAL-----ALM---PPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             H-TTCCCHHH-----HTC---CSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             H-cCCcCccc-----CCc---cceeeeeHHHHHHHHHHhhcCc--cccceEEEEcCC
Confidence            1 11111100     011   1234788999999987776432  244555544433

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=2.1e-17  Score=142.24  Aligned_cols=217  Identities=14%  Similarity=0.046  Sum_probs=146.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-----HHHH------HHhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-----LGAA------LASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-----~~~~------~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|++|||||+|.||+++++.|+++|++|++++|...     +...      ......+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            389999999999999999999999999999988421     1111      111223567889999999999988753  


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC---------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---------  156 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------  156 (278)
                         ++|+|||+|+....     ....++....+++|+.+...++.++...........++++.||......         
T Consensus        79 ---~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~  150 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  150 (339)
T ss_dssp             ---CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             ---ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC
Confidence               79999999986422     2223567788999999999999988876655332345666555543322         


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHH-HhhhccCCCCHHHHHHHH-hhcCCC----
Q 023708          157 -GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAY-RKYLGKADMKPEEVCKMV-RDSGSL----  229 (278)
Q Consensus       157 -~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~----  229 (278)
                       ......|+.+|.+.+.+++.+...+   ++.+..++|+.+..|...... ...      -........ .....+    
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~------i~~~~~~~~~~~~~~~~~g~  221 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRK------ITRALGRIKVGLQTKLFLGN  221 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHH------HHHHHHHHHHTSCCCEEESC
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcch------hhHHHHHHhcCCCCeEEeCC
Confidence             2235589999999999999998876   799999999877665321100 000      001111111 111111    


Q ss_pred             --CCCCCCCHHHHHHHHHHhccCCC
Q 023708          230 --LRGRSASIEDVAQAALFLASEEA  252 (278)
Q Consensus       230 --~~~~~~~~edva~~~~~l~s~~~  252 (278)
                        ..+.+..++|+++++..++..+.
T Consensus       222 ~~~~rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         222 LQASRDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             TTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             CCccccceeeehHHHHHHHHHhcCC
Confidence              12247889999999999987653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.8e-17  Score=143.52  Aligned_cols=162  Identities=19%  Similarity=0.185  Sum_probs=120.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHH--HhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAAL--ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      |+||||||+|.||++++++|+++|++|+++++.    .......  ....++.++.+|++|.++++.+++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            789999999999999999999999999998642    1111111  12235789999999999999988642     699


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC---------------
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG---------------  156 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------  156 (278)
                      +|||+|+.....     ...++....+.+|+.++.++++++...-     -.++|++||...+..               
T Consensus        77 ~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~~~-----i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          77 SVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQYN-----VSKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             EEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             EEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHhcc-----cceEEeecceeeecCcccCCCCCccccccC
Confidence            999999864221     1224556788999999999999886542     358999999877531               


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCC
Q 023708          157 GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHG  195 (278)
Q Consensus       157 ~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~  195 (278)
                      ..+...|+.||.+.+.+++.+..... .++++..++|+.
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~lR~~~  184 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSDK-KSWKFAILRYFN  184 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHST-TSCEEEEEEECE
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhhc-cCCcEEEEeecc
Confidence            12345799999999999998876543 366666666543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=2.7e-17  Score=140.54  Aligned_cols=223  Identities=19%  Similarity=0.097  Sum_probs=149.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-----HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILD-----ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |+||||||+|.||++++++|+++|++|+.++|..     ..++.+....++.++.+|++|.+++.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999998753     33333333345778999999999999888754     6788


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhc-----------CCCCCc
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIM-----------GGLASH  161 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~  161 (278)
                      ++|+|+.....     ...++....+++|+.++.++++++...    +...++++.||...+.           +.....
T Consensus        76 ~~~~a~~~~~~-----~~~~~~~~~~~~n~~g~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          76 VYNLAAQSFVG-----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             EEECCSCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             ccccccccccc-----ccccchHHHHhhhhhchHHHHHHHHHh----CCCcccccccchhhcCcccCCCCCCCCCccccC
Confidence            88888654221     111445788999999999988877664    2134666666655431           112345


Q ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHH--HHhhhccCCCCHHHHHHHHh-hcCCC------CCC
Q 023708          162 AYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNA--YRKYLGKADMKPEEVCKMVR-DSGSL------LRG  232 (278)
Q Consensus       162 ~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~  232 (278)
                      .|+.+|.+.+.+++.+...+   ++++..+.|+.+..|.....  .+..       ...+.+... ....+      ..+
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i-------~~~~~~~~~~~~~~i~~g~g~~~r  216 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKV-------TDAVARIKLGKQQELRLGNVDAKR  216 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHH-------HHHHHHHHTTSCSCEEESCTTCEE
T ss_pred             hhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHH-------HHHHHHHHhCCCCcEEECCCCeEE
Confidence            89999999999999998886   67888888866555431100  0000       011111111 11111      123


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          233 RSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       233 ~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .++.++|+++++..++..+.    +..+++.+|...
T Consensus       217 ~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~~  248 (321)
T d1rpna_         217 DWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  248 (321)
T ss_dssp             ECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             ccEEeHHHHHHHHHHHhcCC----cCCceecccccc
Confidence            47899999999999986543    234666666543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-17  Score=143.98  Aligned_cols=210  Identities=11%  Similarity=-0.017  Sum_probs=143.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH-----HHH----H--HhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDEL-----GAA----L--ASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~-----~~~----~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      |++|||||+|.||.+++++|+++|++|+.++|....     .+.    .  ....++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            445999999999999999999999999999885321     111    1  11123678999999999999998764   


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------  156 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------  156 (278)
                        .++.++|+++....     ....++....+++|+.++.++++++...-..  +..++|++||.+.+..          
T Consensus        79 --~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecchheecCCCCCCCCCCC
Confidence              68899999875422     2223556677899999999999887765332  1358999999876421          


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh-----HHHHHhhhccCCCCHHHHHHHHhhcCC--
Q 023708          157 -GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML-----VNAYRKYLGKADMKPEEVCKMVRDSGS--  228 (278)
Q Consensus       157 -~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (278)
                       ..+...|+.||.+.|.+++.+...+   ++.+..++|+.+..|..     ...+.         ..-..........  
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~---------~~i~~~~~~~~~~~~  217 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKIS---------RSVAKIYLGQLECFS  217 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH---------HHHHHHHHTSCSCEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccc---------eeeehhhcCCcceee
Confidence             1224579999999999999988776   67888888866655421     01100         0001111111111  


Q ss_pred             ----CCCCCCCCHHHHHHHHHHhccCC
Q 023708          229 ----LLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       229 ----~~~~~~~~~edva~~~~~l~s~~  251 (278)
                          ...+.++.++|+++++..++...
T Consensus       218 ~g~g~~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         218 LGNLDAKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             cCCCcceeeeeEecHHHHHHHHHhhcC
Confidence                01235789999999999988654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.2e-17  Score=134.02  Aligned_cols=199  Identities=15%  Similarity=0.117  Sum_probs=132.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      |..|+++||||+|+||++++++|+++|++|.+..|+.++..... ..++.++.+|++|.+++.++++       +.|+||
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-------~~d~vi   72 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-------GQDAVI   72 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-------TCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-------CCCEEE
Confidence            45688999999999999999999999999999999876644332 2347899999999999888775       689999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCC----chhhhhHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLAS----HAYSLSKEAI  170 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----~~Y~~sK~a~  170 (278)
                      |++|......+   .         +++..+..+++++    +++.+ -.++|++||.......+..    ..|...|...
T Consensus        73 ~~~g~~~~~~~---~---------~~~~~~~~~l~~a----a~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  135 (205)
T d1hdoa_          73 VLLGTRNDLSP---T---------TVMSEGARNIVAA----MKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (205)
T ss_dssp             ECCCCTTCCSC---C---------CHHHHHHHHHHHH----HHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEeccCCchhh---h---------hhhHHHHHHHHHH----HHhcC-CCeEEEEeeeeccCCCccccccccccchHHHHH
Confidence            99986533211   1         2333344444443    44433 5699999998765443332    2455556555


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccC
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASE  250 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  250 (278)
                      +.+.+       ..+++...|.||.+...-.....   .             .... ......+++++|+|++++.++..
T Consensus       136 e~~l~-------~~~~~~tiirp~~~~~~~~~~~~---~-------------~~~~-~~~~~~~i~~~DvA~~~~~~l~~  191 (205)
T d1hdoa_         136 HKVLR-------ESGLKYVAVMPPHIGDQPLTGAY---T-------------VTLD-GRGPSRVISKHDLGHFMLRCLTT  191 (205)
T ss_dssp             HHHHH-------HTCSEEEEECCSEEECCCCCSCC---E-------------EESS-SCSSCSEEEHHHHHHHHHHTTSC
T ss_pred             HHHHH-------hcCCceEEEecceecCCCCcccE---E-------------EeeC-CCCCCCcCCHHHHHHHHHHHhCC
Confidence            54433       35899999999887432111000   0             0000 00124567899999999999965


Q ss_pred             CCCCceeeEEeecC
Q 023708          251 EAGFITAHNLVIDG  264 (278)
Q Consensus       251 ~~~~~tG~~i~~dg  264 (278)
                      +.  ..|+++.+.+
T Consensus       192 ~~--~~g~~~~~s~  203 (205)
T d1hdoa_         192 DE--YDGHSTYPSH  203 (205)
T ss_dssp             ST--TTTCEEEEEC
T ss_pred             CC--CCCEEEecCC
Confidence            53  4488877654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=4.4e-17  Score=140.57  Aligned_cols=228  Identities=18%  Similarity=0.117  Sum_probs=153.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc----hHHHHHHHh------hhCCeEEEecCCCHHHHHHHHHHHH
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL----DELGAALAS------TIGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~----~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+.|++|||||+|.||++++++|.++|++|++++|.    .+....+..      ...+.++.+|+.|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            356899999999999999999999999999998752    222222211      1236788999999887665543   


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-------
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-------  157 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------  157 (278)
                          ..+.++|.++....     ....++....+++|+.++.++++++...    + ..++|++||...+...       
T Consensus        91 ----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             ----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc----C-CceEEEcccceeeCCCCCCCccC
Confidence                68899988875422     2234777889999999999998887654    2 4589999998876422       


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-----
Q 023708          158 ----LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-----  228 (278)
Q Consensus       158 ----~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  228 (278)
                          .+...|+.+|.+.+.+++.+++.+   ++++..++|+.+.++......    ....+-+..........+.     
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~----~~~~~i~~~~~~~~~g~~i~~~g~  229 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNG----AYAAVIPKWTSSMIQGDDVYINGD  229 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCS----TTCCHHHHHHHHHHHTCCCEEESS
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCC----chhhhHHHHHHHHHcCCceEEcCC
Confidence                234689999999999999998876   678888888766544211000    0000001111222211111     


Q ss_pred             -CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          229 -LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       229 -~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                       ...+.+..++|++.++..++.... ...|+.+++..+..
T Consensus       230 g~~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~  268 (341)
T d1sb8a_         230 GETSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGR  268 (341)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCC
T ss_pred             CCEEEEEEEEeccchhhhhhhhccc-cccceeeeeccccc
Confidence             112458899999999888875442 24567777765544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.3e-17  Score=140.90  Aligned_cols=219  Identities=13%  Similarity=0.107  Sum_probs=140.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+||||||+|.||++++++|+++|++|+++++.. ...+.+.....  ...+|+.+.+.++.+       +.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~-------~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEPL-------YIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSCC-------CCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC--CCceEEEehHHHHHH-------HcCCCEEEE
Confidence            37899999999999999999999999999987521 11111111111  112233332222222       236999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC----------------CCC
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG----------------GLA  159 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~~~  159 (278)
                      +|+......     ..++..+.+++|+.++.++++++...      ..++|++||.+.+..                ..+
T Consensus        72 lAa~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p  140 (312)
T d2b69a1          72 LASPASPPN-----YMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP  140 (312)
T ss_dssp             CCSCCSHHH-----HTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST
T ss_pred             CcccCCchh-----HHhCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheecCCCCCCCCccccCCCCCCCC
Confidence            998642211     11345678899999999999876543      248999999776632                123


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------CCCCC
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------LLRGR  233 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  233 (278)
                      ...|+.||.+.+.+++.++..+   |+++..++|+.+..|.....      ...+-+.-+.........      ...+.
T Consensus       141 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~------~~~~i~~~i~~~~~g~~i~i~~~g~~~r~  211 (312)
T d2b69a1         141 RACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMN------DGRVVSNFILQALQGEPLTVYGSGSQTRA  211 (312)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTT------CCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCC------CccHHHHHHHHHHcCCCeEEeCCCCeeEc
Confidence            4579999999999999999886   78999999988876532110      000011112222222110      11235


Q ss_pred             CCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          234 SASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       234 ~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      +...+|+++++..++...    .+..+++.+|...
T Consensus       212 ~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         212 FQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             CEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             cEEHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            788999999999888543    2445777776654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=9.2e-17  Score=138.76  Aligned_cols=235  Identities=13%  Similarity=0.069  Sum_probs=152.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEec----------chHHHHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADI----------LDELGAALA--STIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r----------~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      |+||||||+|.||.+++++|+++|++|+++++          ..+....+.  ...++.++.+|++|.+++++++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            78899999999999999999999999998753          112222222  223478999999999999888764   


Q ss_pred             hcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC--------
Q 023708           86 WKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG--------  157 (278)
Q Consensus        86 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------  157 (278)
                        ..+++++|.|+....     ....++..+.+++|+.++.++++++...    + -.++++.||...+...        
T Consensus        80 --~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~-v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAH----G-VKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             --CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             --cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhc----C-cccccccccceeeecccccccccc
Confidence              368899999986522     2223456788999999999988876543    2 4589998888765321        


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhc--cCCCCHHHHHHHHhhcC----
Q 023708          158 ----LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLG--KADMKPEEVCKMVRDSG----  227 (278)
Q Consensus       158 ----~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----  227 (278)
                          .....|+.+|.+.+...+.+++..  .+.....+.|+.+.++-....+.....  .....+...........    
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  225 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEE
Confidence                234479999999999998876643  356677666654433211000000000  00000000111111000    


Q ss_pred             ---------CCCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          228 ---------SLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       228 ---------~~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                               ....+.+..++|+|.++..+.........++.+++.+|....
T Consensus       226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence                     001235789999999988886655556678899998877643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=9e-17  Score=137.75  Aligned_cols=223  Identities=17%  Similarity=0.124  Sum_probs=143.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-----hHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADIL-----DELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      +||||||+|.||++++++|+++|++|+++++.     .+....+....++.++.+|+++.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            58999999999999999999999999998642     222333334445889999999999999988754     68999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----------------
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------------  157 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------------  157 (278)
                      ||+|+....     ....++....+++|+.|+.++++++...-     ..+.++.||.....+.                
T Consensus        77 ih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-----~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN-----SNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhccc-----cccccccccccccccccccccccccccccccc
Confidence            999986522     12224568899999999999998777642     3455555655543221                


Q ss_pred             ------------CCCchhhhhHHHHHHHHHHHHHHHCCCCcEE--EEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHH
Q 023708          158 ------------LASHAYSLSKEAIIGLARSTACELGKHGIRV--NCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMV  223 (278)
Q Consensus       158 ------------~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v--~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  223 (278)
                                  .....|+.+|...+.+.......+....+.+  ..+.+|...........          +.-.....
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  216 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV----------GWFCQKAV  216 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH----------HHHHHHHH
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeecccccccccccc----------chhhHHHH
Confidence                        1345799999999999999888874321111  11222222222111111          00011111


Q ss_pred             h----hcCC-------CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcc
Q 023708          224 R----DSGS-------LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       224 ~----~~~~-------~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~  267 (278)
                      .    ...+       ...+.+..++|++++++.++... ....|+.+++.+|..
T Consensus       217 ~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         217 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             HHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence            0    0000       01234678999999999887543 235678888876654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=9.1e-17  Score=139.69  Aligned_cols=224  Identities=15%  Similarity=0.084  Sum_probs=152.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++++||||||+|.||.+++++|.++|++|+++++...... ........+..+|+.+.+++.++++       .+|.+||
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~Vih   85 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVMENCLKVTE-------GVDHVFN   85 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECCTTSHHHHHHHHT-------TCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhcccCcEEEeechhHHHHHHHhh-------cCCeEee
Confidence            4667999999999999999999999999999876432110 1111235678899999887777654       6999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC------------------
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG------------------  157 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------------  157 (278)
                      .|+....    .....+.....+.+|+.++.+++.++...-     ..++|++||...+...                  
T Consensus        86 ~a~~~~~----~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-----vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~  156 (363)
T d2c5aa1          86 LAADMGG----MGFIQSNHSVIMYNNTMISFNMIEAARING-----IKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  156 (363)
T ss_dssp             CCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-----CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             ccccccc----ccccccccccccccccchhhHHHHhHHhhC-----ccccccccccccccccccccccccccccccCCcC
Confidence            9986532    112224567788899999999888776542     4689999998775321                  


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHH---HHHHhhcCC------
Q 023708          158 LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEV---CKMVRDSGS------  228 (278)
Q Consensus       158 ~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------  228 (278)
                      .....|+.+|.+.+.+++.+.+++   |+++..++|+.+..+.....      .........   .........      
T Consensus       157 ~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~g  227 (363)
T d2c5aa1         157 EPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWK------GGREKAPAAFCRKAQTSTDRFEMWGDG  227 (363)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCS------SSCCCHHHHHHHHHHHCSSCEEEESCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCccc------ccccccccccccccccccccccccCCC
Confidence            124479999999999999998887   78999999887766531100      000000000   011111000      


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCcccC
Q 023708          229 LLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG  269 (278)
Q Consensus       229 ~~~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~~  269 (278)
                      ...+.++..+|+++++..++...    .|..+++-+|....
T Consensus       228 ~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s  264 (363)
T d2c5aa1         228 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  264 (363)
T ss_dssp             CCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred             CeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCccc
Confidence            11345889999999999988543    35678887776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.70  E-value=8.2e-17  Score=139.21  Aligned_cols=203  Identities=14%  Similarity=0.085  Sum_probs=138.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc-------hHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL-------DELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~-------~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .|.||||||+|.||.+++++|.+.|+.|.++.++       ....... ...++.++.+|+.|.+.+.+++.       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh-hcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            4789999999999999999999999876554432       1111111 11246789999999998888764       6


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-------------
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-------------  156 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------  156 (278)
                      .+.++|.|+.....     ...++..+.+++|+.+..+++..+...      ..++|++||...+..             
T Consensus        74 ~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          74 ADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             CSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccccC
Confidence            88899998764221     112445678999999999998877554      347888887765421             


Q ss_pred             ----------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhH--HHHHhhhccCCCCHHHHHHHHh
Q 023708          157 ----------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLV--NAYRKYLGKADMKPEEVCKMVR  224 (278)
Q Consensus       157 ----------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~  224 (278)
                                ..+...|+.+|.+.+.+++.+..++   ++++..++|+.+..|...  ..+          ...+.....
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~----------~~~i~~~~~  209 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFI----------PRQITNILA  209 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHH----------HHHHHHHHH
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchh----------HHHHHHHHc
Confidence                      1123469999999999999998876   799999999877664211  000          001111111


Q ss_pred             hcC------CCCCCCCCCHHHHHHHHHHhccCC
Q 023708          225 DSG------SLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       225 ~~~------~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      ...      ....+.++..+|++++++.++...
T Consensus       210 ~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~  242 (346)
T d1oc2a_         210 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG  242 (346)
T ss_dssp             TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred             CCceeEeCCCCccccccchhhHHHHHHHHHhhc
Confidence            100      012346789999999999887544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.68  E-value=3e-17  Score=140.56  Aligned_cols=219  Identities=16%  Similarity=0.125  Sum_probs=149.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEec-----------chHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADI-----------LDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r-----------~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +||||||+|.||+++++.|+++|++|....|           ............++.++.+|+++........       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            5899999999999999999999986544321           1111222222334778999999988766543       


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC----------
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG----------  157 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------  157 (278)
                      ..+|.++|+|+....     ....+...+.+++|+.++.++++++...    + ..++|+.||...+.+.          
T Consensus        75 ~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          75 RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             cccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc----C-CceEEEeecceeecCCCCCCCCCCCC
Confidence            379999999976422     2233556778899999999999888643    2 4689999998876432          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC------CC
Q 023708          158 -LASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS------LL  230 (278)
Q Consensus       158 -~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  230 (278)
                       .+...|+.+|.+.+.+++.+++++   ++++..++|+.+.+|.....        .+-+.-+.........      -.
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~--------~~i~~~i~~~~~~~~i~v~~~g~~  213 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--------KLIPLFVTNLLDGGTLPLYGDGAN  213 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--------SHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcC--------cHHHHHHHHHHcCCCcEEecCCCe
Confidence             234589999999999999999886   78899999887766532100        0001111112211100      01


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          231 RGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       231 ~~~~~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      .+.+..++|+|+++..++....   .|+.+++..|...
T Consensus       214 ~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         214 VREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             EEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence            2347899999999999997553   4778888777654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.6e-16  Score=134.04  Aligned_cols=151  Identities=16%  Similarity=0.146  Sum_probs=118.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .|+||||||+|.||++++++|+++|+.|+++.+..               .+|+.+.+.++++++.-     .+|.++|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------~~~~~~~~~~~~~~~~~-----~~d~v~~~   61 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASE-----RIDQVYLA   61 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------hccccCHHHHHHHHhhc-----CCCEEEEc
Confidence            57899999999999999999999999988776543               26999999998887642     69999999


Q ss_pred             CccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC----------------CC
Q 023708           97 AGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL----------------AS  160 (278)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------------~~  160 (278)
                      |+....    ......+..+.+++|+.++.++++++...    + -.++|++||.+.+.+..                ..
T Consensus        62 a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~  132 (315)
T d1e6ua_          62 AAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTN  132 (315)
T ss_dssp             CCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGG
T ss_pred             chhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCC
Confidence            975422    12223455677899999999998877654    1 45899999988764211                12


Q ss_pred             chhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          161 HAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       161 ~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      ..|+.||.+.|.+++.+.++.   |+++..++|+.+..|
T Consensus       133 ~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp  168 (315)
T d1e6ua_         133 EPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGP  168 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEST
T ss_pred             CHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECC
Confidence            369999999999999998887   789999999777654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.64  E-value=4.5e-15  Score=129.84  Aligned_cols=166  Identities=20%  Similarity=0.168  Sum_probs=120.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEec------------chHHHHHHHhh----------hCCeEEEecCCCH
Q 023708           17 GKVAVITGGARGIGAATAKLFAE-NGAHIVIADI------------LDELGAALAST----------IGGRYIHCDVTKE   73 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~r------------~~~~~~~~~~~----------~~~~~~~~D~~~~   73 (278)
                      +..||||||+|.||.+++++|++ .|++|+++++            ..+........          ....++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45699999999999999999986 6899998763            11111111111          1256789999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchh
Q 023708           74 EDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAA  153 (278)
Q Consensus        74 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~  153 (278)
                      +.++++++.    ..++|+|+|.|+....     ....+.....+++|+.+...+++++...-     ..++++.+|...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-----~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLHK-----CDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhccC-----Cccccccccccc
Confidence            988888864    3579999999986422     12224566788999999999888777532     457777776665


Q ss_pred             hcC------------------CCCCchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCCh
Q 023708          154 IMG------------------GLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSE  199 (278)
Q Consensus       154 ~~~------------------~~~~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~  199 (278)
                      +..                  ..+...|+.+|.+.+.+++.+...+   |+.+..++|+.+..+
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~  208 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA  208 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeecc
Confidence            431                  1234579999999999999998876   788888888766543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.64  E-value=2.8e-15  Score=129.51  Aligned_cols=171  Identities=18%  Similarity=0.103  Sum_probs=127.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh----hCCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST----IGGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      ++||+||||||+|.||.++++.|+++|++|++++|.......+.+.    .++.++.+|++|.+++.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            5899999999999999999999999999999999875433332222    24789999999999998888754     78


Q ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC------------CC
Q 023708           91 DIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG------------GL  158 (278)
Q Consensus        91 d~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~  158 (278)
                      |+++|.|+...     ...+.+.....+++|+.++..+++++...-    ....+++.||......            ..
T Consensus        81 ~~v~~~aa~~~-----~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHVG----GVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHC----CCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhcccc-----ccccccCCccccccccccchhhhhhhhccc----cccccccccccccccccccccccccccccC
Confidence            99999998542     223346678899999999999888877642    1345555555443321            12


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHHC------CCCcEEEEecCCCCCCh
Q 023708          159 ASHAYSLSKEAIIGLARSTACELG------KHGIRVNCISPHGVPSE  199 (278)
Q Consensus       159 ~~~~Y~~sK~a~~~l~~~l~~e~~------~~~i~v~~v~pG~v~t~  199 (278)
                      +...|+.+|.+.+.+++.++.++.      ..++.+..+.|+.+..+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence            344799999999999999888763      23678888888766543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.9e-16  Score=128.35  Aligned_cols=200  Identities=17%  Similarity=0.086  Sum_probs=131.7

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .|++|+||||||+|.||++++++|+++|.  +|++.+|++...... ....+....+|+.+.+++.+.+       ..+|
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~-------~~~d   82 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAF-------QGHD   82 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGG-------SSCS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeecccccccccccc-------cccc
Confidence            47889999999999999999999999996  799999865322111 1123556667887766554433       4799


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      ++||++|...        .........++|+.++..+++.+...    + -.++|++||.......  ...|+.+|...+
T Consensus        83 ~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~----~-v~~fi~~Ss~~~~~~~--~~~Y~~~K~~~E  147 (232)
T d2bkaa1          83 VGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAG----G-CKHFNLLSSKGADKSS--NFLYLQVKGEVE  147 (232)
T ss_dssp             EEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCCTTC--SSHHHHHHHHHH
T ss_pred             cccccccccc--------cccchhhhhhhcccccceeeeccccc----C-ccccccCCccccccCc--cchhHHHHHHhh
Confidence            9999998531        11455667888999999888876542    2 5689999998875433  347999999888


Q ss_pred             HHHHHHHHHHCCCCc-EEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCC-CCCCCCCCHHHHHHHHHHhcc
Q 023708          172 GLARSTACELGKHGI-RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGS-LLRGRSASIEDVAQAALFLAS  249 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~edva~~~~~l~s  249 (278)
                      ...+.+       +. ++..++||.+..+........         .-.......... ....+.++++|+|++++.++.
T Consensus       148 ~~l~~~-------~~~~~~IlRP~~i~G~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~  211 (232)
T d2bkaa1         148 AKVEEL-------KFDRYSVFRPGVLLCDRQESRPGE---------WLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV  211 (232)
T ss_dssp             HHHHTT-------CCSEEEEEECCEEECTTGGGSHHH---------HHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             hccccc-------cccceEEecCceeecCCCcCcHHH---------HHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHh
Confidence            766432       33 577889999876643211100         001111111100 011345678999999888875


Q ss_pred             CCC
Q 023708          250 EEA  252 (278)
Q Consensus       250 ~~~  252 (278)
                      ...
T Consensus       212 ~~~  214 (232)
T d2bkaa1         212 RPR  214 (232)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=7.3e-16  Score=125.44  Aligned_cols=216  Identities=13%  Similarity=0.060  Sum_probs=139.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCe--EEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAH--IVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~--Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      ++||||||+|+||+++++.|+++|+.  |+...|+.+....+..  ++.++.+|+++.+++.++++       .+|.+||
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~-------~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQ-------GIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHT-------TCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccc-------cceeeEE
Confidence            78999999999999999999999975  5556787765544432  46789999999998888775       6999999


Q ss_pred             CCccCCCCCC--------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           96 NAGISGSGGS--------ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        96 nag~~~~~~~--------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                      +++.......        ........+.....+|+.+...++.......     .+...+.++.....+......+..++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~  149 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGTNPDHPLNKLGNGN  149 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTTCTTCGGGGGGGCC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----ccccccccccccCCCCcccccccccc
Confidence            9986432111        1111123455667889999888777665543     46788887777665544433333333


Q ss_pred             HH-HHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 023708          168 EA-IIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALF  246 (278)
Q Consensus       168 ~a-~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  246 (278)
                      .. .....+.+..+   .++++..++||.+..+......  .....  ..    ....     ....+++++|+|++++.
T Consensus       150 ~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~--~~----~~~~-----~~~~~i~~~Dva~a~~~  213 (252)
T d2q46a1         150 ILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRE--LLVGK--DD----ELLQ-----TDTKTVPRADVAEVCIQ  213 (252)
T ss_dssp             HHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSC--EEEES--TT----GGGG-----SSCCEEEHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhc---ccccceeecceEEECCCcchhh--hhhcc--Cc----cccc-----CCCCeEEHHHHHHHHHH
Confidence            32 22222333232   4789999999988655321100  00000  00    0000     11346789999999999


Q ss_pred             hccCCCCCceeeEEeecCC
Q 023708          247 LASEEAGFITAHNLVIDGG  265 (278)
Q Consensus       247 l~s~~~~~~tG~~i~~dgG  265 (278)
                      ++..+.  ..|+.+++-++
T Consensus       214 ~l~~~~--~~g~~~~i~~~  230 (252)
T d2q46a1         214 ALLFEE--AKNKAFDLGSK  230 (252)
T ss_dssp             HTTCGG--GTTEEEEEEEC
T ss_pred             HhCCcc--ccCcEEEEeeC
Confidence            886543  56888888654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.41  E-value=2.1e-12  Score=107.31  Aligned_cols=195  Identities=14%  Similarity=0.083  Sum_probs=127.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      .+||||||||.||++++++|.++|++|+.++|.+                +|+.|.++++++++..     ++|+|||+|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~-----~~d~vih~a   60 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEK-----KPNVVINCA   60 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHH-----CCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHc-----CCCEEEeec
Confidence            3599999999999999999999999999998853                5999999999888754     689999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchhhhh
Q 023708           98 GISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAYSLS  166 (278)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~s  166 (278)
                      +....     +.........+..|+.....+.......      ...+++.||...+..           ......|+.+
T Consensus        61 ~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~  129 (281)
T d1vl0a_          61 AHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKT  129 (281)
T ss_dssp             CCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHH
T ss_pred             ccccc-----ccccccchhhcccccccccccccccccc------cccccccccceeeeccccccccccccccchhhhhhh
Confidence            86422     1222444667788888887766655543      345666666554321           2234578999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcC----CCCCCCCCCHHHHHH
Q 023708          167 KEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSG----SLLRGRSASIEDVAQ  242 (278)
Q Consensus       167 K~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~edva~  242 (278)
                      |...+.+.+..       +.+...+.|+.+..+...-.           +.-.........    ....+.+..++|+++
T Consensus       130 k~~~e~~~~~~-------~~~~~i~R~~~vyG~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~  191 (281)
T d1vl0a_         130 KLEGENFVKAL-------NPKYYIVRTAWLYGDGNNFV-----------KTMINLGKTHDELKVVHDQVGTPTSTVDLAR  191 (281)
T ss_dssp             HHHHHHHHHHH-------CSSEEEEEECSEESSSSCHH-----------HHHHHHHHHCSEEEEESSCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHh-------CCCccccceeEEeCCCcccc-----------cchhhhhccCCceeecCCceeccchhhhhhh
Confidence            98887776442       45677788888754421110           001111111100    001245779999999


Q ss_pred             HHHHhccCCCCCceeeEEeecCCc
Q 023708          243 AALFLASEEAGFITAHNLVIDGGY  266 (278)
Q Consensus       243 ~~~~l~s~~~~~~tG~~i~~dgG~  266 (278)
                      ++..++....   +| .+++-+|.
T Consensus       192 ~~~~~~~~~~---~g-~~~~~~~~  211 (281)
T d1vl0a_         192 VVLKVIDEKN---YG-TFHCTCKG  211 (281)
T ss_dssp             HHHHHHHHTC---CE-EEECCCBS
T ss_pred             hhhhhhhhcc---cC-ceeEeCCC
Confidence            9999986542   35 44444443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.34  E-value=1.2e-13  Score=110.68  Aligned_cols=189  Identities=15%  Similarity=0.063  Sum_probs=118.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|++|||||||.||++++++|+++|+  .|++..|....        ....+..+..|..++..      ...+.+|.+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~~~d~~~~~~------~~~~~~d~vi   67 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLP------QLDGSIDTAF   67 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGG------GCCSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hcccccccccchhhhhh------ccccchheee
Confidence            48899999999999999999999997  56666665311        11124455555443322      2234689999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHHHHH
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLA  174 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~l~  174 (278)
                      +++|.....    .   .......++|+.++..+++.+...    + ..+++++||..+....  ...|..+|...|...
T Consensus        68 ~~~g~~~~~----~---~~~~~~~~~~~~~~~~~~~~a~~~----~-v~~~i~~Ss~~~~~~~--~~~y~~~K~~~E~~l  133 (212)
T d2a35a1          68 CCLGTTIKE----A---GSEEAFRAVDFDLPLAVGKRALEM----G-ARHYLVVSALGADAKS--SIFYNRVKGELEQAL  133 (212)
T ss_dssp             ECCCCCHHH----H---SSHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCCTTC--SSHHHHHHHHHHHHH
T ss_pred             eeeeeeccc----c---ccccccccchhhhhhhcccccccc----c-cccccccccccccccc--ccchhHHHHHHhhhc
Confidence            999854111    1   123567888999998888866432    2 5689999998765433  457999999887765


Q ss_pred             HHHHHHHCCCCc-EEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhccCC
Q 023708          175 RSTACELGKHGI-RVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEE  251 (278)
Q Consensus       175 ~~l~~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  251 (278)
                      +.       .+. ++..++|+.+..+.....+....... ..+.-...          .+.+.++|+|++++.++..+
T Consensus       134 ~~-------~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~-~~~~~~~~----------~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         134 QE-------QGWPQLTIARPSLLFGPREEFRLAEILAAP-IARILPGK----------YHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             TT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCC-CC----CH----------HHHHHHHHHHHHHHHHHTCC
T ss_pred             cc-------cccccceeeCCcceeCCcccccHHHHHHHH-HhhccCCC----------CcEEEHHHHHHHHHHHHcCC
Confidence            42       233 57889999986653221110010000 00000000          01257899999999998655

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.27  E-value=5.3e-12  Score=105.42  Aligned_cols=129  Identities=16%  Similarity=0.123  Sum_probs=93.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~nag   98 (278)
                      .||||||+|.||+++++.|.++|..|++..+..             .+.+|++|.+.++++++..     ++|+|||+||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~-------------~~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKL-----RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCc-------------cccCcCCCHHHHHHHHHHc-----CCCEEEEecc
Confidence            499999999999999999999987555433322             1357999999999988764     6999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC-----------CCCchhhhhH
Q 023708           99 ISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG-----------LASHAYSLSK  167 (278)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y~~sK  167 (278)
                      .....     ...++....+++|+.+...+.+++...      ..+++++||...+.+.           .....|+.+|
T Consensus        64 ~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k  132 (298)
T d1n2sa_          64 HTAVD-----KAESEPELAQLLNATSVEAIAKAANET------GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTK  132 (298)
T ss_dssp             CCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTTT------TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHH
T ss_pred             ccccc-----ccccCccccccccccccccchhhhhcc------ccccccccccccccCCCCCCCccccccCCCchHhhhh
Confidence            65321     112344678899999998887766421      4578888777654321           1235799999


Q ss_pred             HHHHHHHHH
Q 023708          168 EAIIGLARS  176 (278)
Q Consensus       168 ~a~~~l~~~  176 (278)
                      .+.+.+.+.
T Consensus       133 ~~~e~~~~~  141 (298)
T d1n2sa_         133 LAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHH
T ss_pred             hhhhhhHHh
Confidence            988876644

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.24  E-value=7.7e-12  Score=105.03  Aligned_cols=200  Identities=11%  Similarity=0.028  Sum_probs=112.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH-----HHHHH--HhhhCCeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDE-----LGAAL--ASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~-----~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .++||||||+|.||++++++|+++|++|+++.|+..     .....  ....++.++.+|+.|.+++.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            355999999999999999999999999999988531     11111  223357889999999998887765       6


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCC-CCchhhhhHH
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGL-ASHAYSLSKE  168 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~Y~~sK~  168 (278)
                      .+.++++++.....                .|..+...++.++..    .. ..++++.||........ ....|..++.
T Consensus        76 ~~~~~~~~~~~~~~----------------~~~~~~~~~l~~a~~----~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          76 VDVVISALAGGVLS----------------HHILEQLKLVEAIKE----AG-NIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             CSEEEECCCCSSSS----------------TTTTTHHHHHHHHHH----SC-CCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cchhhhhhhhcccc----------------cchhhhhHHHHHHHH----hc-CCcEEEEeeccccCCCcccccchhhhhh
Confidence            88899888643221                233334444443332    22 45677777765433221 1122333333


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHhc
Q 023708          169 AIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA  248 (278)
Q Consensus       169 a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  248 (278)
                      ......+.+..+   .++....++|+.+..+............. ......  ...... .....++.++|+|++++.++
T Consensus       135 ~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~g-~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMM-PPRDKV--LIYGDG-NVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSS-CCSSEE--CCBTTS-CSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhh-hccccc--cccccc-ccccceeeHHHHHHHHHHHh
Confidence            333333333333   36778888888775432211100000000 000000  000000 01234689999999999998


Q ss_pred             cCC
Q 023708          249 SEE  251 (278)
Q Consensus       249 s~~  251 (278)
                      ..+
T Consensus       208 ~~~  210 (312)
T d1qyda_         208 DDP  210 (312)
T ss_dssp             TCG
T ss_pred             cCc
Confidence            544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.23  E-value=2.3e-11  Score=101.45  Aligned_cols=211  Identities=13%  Similarity=0.067  Sum_probs=121.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH------HHHHH--hhhCCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL------GAALA--STIGGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~------~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      +.|+||||||+|.||++++++|+++|++|++.+|....      ...+.  ...++.++.+|+.+.....+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            35789999999999999999999999999999885321      11111  12347788999999998777765      


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhH
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSK  167 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  167 (278)
                       ..+.++|+++....                    .+...+.+++...    . ...+++.||............+...+
T Consensus        76 -~~~~vi~~~~~~~~--------------------~~~~~~~~a~~~~----~-~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          76 -NVDVVISTVGSLQI--------------------ESQVNIIKAIKEV----G-TVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             -TCSEEEECCCGGGS--------------------GGGHHHHHHHHHH----C-CCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             -hceeeeeccccccc--------------------chhhHHHHHHHHh----c-cccceeeecccccccccccccccccc
Confidence             68899998874311                    2223333333322    2 34677777655444333333444444


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHh
Q 023708          168 EAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFL  247 (278)
Q Consensus       168 ~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  247 (278)
                      .......+....+   .+++...+.|+.+..+....... ... .......   ............++.++|+|++++.+
T Consensus       130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~-~~~-~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (307)
T d1qyca_         130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQ-AGL-TAPPRDK---VVILGDGNARVVFVKEEDIGTFTIKA  201 (307)
T ss_dssp             HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTC-TTC-SSCCSSE---EEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             ccccccccchhhc---cCCCceecccceecCCCccchhh-hhh-hhhhccc---ceeeecccccccCCcHHHHHHHHHHH
Confidence            4443333333333   36788889998886553321110 000 0000000   00000001124578999999999999


Q ss_pred             ccCCCCCceeeEEeecCCcc
Q 023708          248 ASEEAGFITAHNLVIDGGYT  267 (278)
Q Consensus       248 ~s~~~~~~tG~~i~~dgG~~  267 (278)
                      +..+. ...+..+++.+|..
T Consensus       202 l~~~~-~~~~~~~~~~~~~~  220 (307)
T d1qyca_         202 VDDPR-TLNKTLYLRLPANT  220 (307)
T ss_dssp             SSCGG-GTTEEEECCCGGGE
T ss_pred             hcChh-hcCceeEEeCCCCc
Confidence            86543 22333334444443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=8e-11  Score=98.41  Aligned_cols=215  Identities=18%  Similarity=0.201  Sum_probs=121.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-eEEEEecchH--HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh--hcCCccEEE
Q 023708           20 AVITGGARGIGAATAKLFAENGA-HIVIADILDE--LGAALASTIGGRYIHCDVTKEEDVESAVRLAVS--WKGQLDIMF   94 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~--~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~g~id~li   94 (278)
                      ||||||+|.||.+++++|+++|+ .|+++++...  ....+.+     ...+|..+.+.   +.+....  .+..+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~   73 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-----LNIADYMDKED---FLIQIMAGEEFGDVEAIF   73 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-----SCCSEEEEHHH---HHHHHHTTCCCSSCCEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-----cchhhhccchH---HHHHHhhhhcccchhhhh
Confidence            89999999999999999999996 5777653221  1111211     11223333332   3333332  345688999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC-----------CCCCchh
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG-----------GLASHAY  163 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  163 (278)
                      |.|+.....    .   .+.+...+.|+.+...+++.+...      .-++++.||.....+           ......|
T Consensus        74 ~~aa~~~~~----~---~~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          74 HEGACSSTT----E---WDGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             ECCSCCCTT----C---CCHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhccccccc----c---cccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccc
Confidence            998754222    1   233456677788887777765544      224566666555432           2345589


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChh------hHHHH---HhhhccCCCCHHHHHHHHhhcCCCCCCCC
Q 023708          164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEM------LVNAY---RKYLGKADMKPEEVCKMVRDSGSLLRGRS  234 (278)
Q Consensus       164 ~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
                      +.+|.+.+.+++.+...+   ++.+..+.|..+..|.      .....   ....... ..+..    ... .....+.+
T Consensus       141 ~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~g-~~~~~r~~  211 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKL----FEG-SENFKRDF  211 (307)
T ss_dssp             HHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------------CBCE
T ss_pred             ccccchhhhhcccccccc---ccccccccceeEeeccccccccccccccccccccccc-cceee----ecC-ccceeeee
Confidence            999999999999887665   5666666665544331      11111   0011000 00000    000 00112457


Q ss_pred             CCHHHHHHHHHHhccCCCCCceeeEEeecCCccc
Q 023708          235 ASIEDVAQAALFLASEEAGFITAHNLVIDGGYTT  268 (278)
Q Consensus       235 ~~~edva~~~~~l~s~~~~~~tG~~i~~dgG~~~  268 (278)
                      ..++|+++++..++....    ...+++..|...
T Consensus       212 ~~v~d~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         212 VYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             EEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             eecccHHHHHHHHhhhcc----ccccccccccch
Confidence            789999999998886442    235677666544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.14  E-value=1.9e-11  Score=104.98  Aligned_cols=212  Identities=11%  Similarity=-0.007  Sum_probs=119.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH--HHHHHhhhCCeEEEecCCCHHH-HHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL--GAALASTIGGRYIHCDVTKEED-VESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~g~id~   92 (278)
                      +.|+|+||||+|.||.+++++|+++|++|+++.|+...  ...+....++..+.+|+.|..+ ++.++       ...|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~~~   74 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-------EGAHL   74 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-------TTCSE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHh-------cCCce
Confidence            57999999999999999999999999999999986433  3334444467889999998654 33333       36888


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcC--CCCCchhhhhHHHH
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMG--GLASHAYSLSKEAI  170 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~Y~~sK~a~  170 (278)
                      ++++......                 .++....+++.++...    + ..++++.||......  ......|..+|...
T Consensus        75 ~~~~~~~~~~-----------------~~~~~~~~~~~aa~~a----g-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          75 AFINTTSQAG-----------------DEIAIGKDLADAAKRA----G-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             EEECCCSTTS-----------------CHHHHHHHHHHHHHHH----S-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             EEeecccccc-----------------hhhhhhhHHHHHHHHh----C-CCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            8776532111                 1122233344444322    2 346777777655433  23344677788776


Q ss_pred             HHHHHHHHHHHCCCCcEEEEecCCCCCChhhHHHHHhhhccCCCCHHHHHHHHhhcCCCCCCCCCC-HHHHHHHHHHhcc
Q 023708          171 IGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSAS-IEDVAQAALFLAS  249 (278)
Q Consensus       171 ~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~edva~~~~~l~s  249 (278)
                      +.+.+.       .++....+.||.+............. ...................+. .+.. .+|+++++..++.
T Consensus       133 ~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~Dva~~v~~~l~  203 (350)
T d1xgka_         133 ENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPL-PWLDAEHDVGPALLQIFK  203 (350)
T ss_dssp             HHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCE-EEECHHHHHHHHHHHHHH
T ss_pred             HHHHHh-------hccCceeeeeceeecccccccccccc-ccccccccceeeecccCCCcc-eEEEeHHHHHHHHHHHHh
Confidence            665443       35677778887654332111000000 000000000000000000000 1123 4789999998886


Q ss_pred             CCCCCceeeEEeecCC
Q 023708          250 EEAGFITAHNLVIDGG  265 (278)
Q Consensus       250 ~~~~~~tG~~i~~dgG  265 (278)
                      +......|+.+.+.|.
T Consensus       204 ~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         204 DGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HCHHHHTTCEEEECSE
T ss_pred             CChhhcCCeEEEEeCC
Confidence            5444567888888664

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.91  E-value=1.4e-13  Score=108.62  Aligned_cols=167  Identities=13%  Similarity=0.045  Sum_probs=90.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------------------CeEEEecCCCHHHHHHH
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------------------GRYIHCDVTKEEDVESA   79 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------------------~~~~~~D~~~~~~i~~~   79 (278)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.++++                   .............++..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46778888999999999999999999999999988887766543                   11222222222222222


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCC
Q 023708           80 VRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLA  159 (278)
Q Consensus        80 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  159 (278)
                      ....... ...............              ....+..+...+.+.....+.... ....+++.|.........
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          82 RDLKNIL-REKIVVSPLVPVSRG--------------AKGFTYSSERSAAEIVAEVLESEK-VVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHTHHHH-TTSEEEECCCCEECC--------------TTCCEECCSSCHHHHHHHHHTCSC-EEECCTTCCHHHHHCTTC
T ss_pred             HHhhhhh-ccccccccccccccc--------------cccccccccchhhhhhhhhhhhhc-ccccceeecHHHhcCccc
Confidence            2111111 111111111111100              001111111112222333343322 233333344444444445


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHCCCCcEEEEecCCCCCChhh
Q 023708          160 SHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEML  201 (278)
Q Consensus       160 ~~~Y~~sK~a~~~l~~~l~~e~~~~~i~v~~v~pG~v~t~~~  201 (278)
                      ...|...+++....++..+.++....+.++.++||.+.+...
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~~  187 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRL  187 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHH
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHHH
Confidence            556777777777788887777766678889999999876543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.17  E-value=2.3e-05  Score=59.06  Aligned_cols=81  Identities=19%  Similarity=0.186  Sum_probs=58.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC-eEEEecCCCHHHHHHHHHHHHhhcC-CccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKG-QLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~g-~id~l   93 (278)
                      .+.+++|+| +|++|...++.+...|++|+++++++++.+...+ ++. ..+..|-. .++.....+.+.+.+| .+|++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~~~~~~-~~~~~~~~~~~~~~~g~g~D~v  102 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTLVVDPA-KEEESSIIERIRSAIGDLPNVT  102 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEECCTT-TSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEEecccc-ccccchhhhhhhcccccCCcee
Confidence            467899997 6899999999888899999999999988765544 343 33333433 3334555566666554 69999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.++|.
T Consensus       103 id~~g~  108 (170)
T d1e3ja2         103 IDCSGN  108 (170)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.3e-06  Score=63.11  Aligned_cols=79  Identities=14%  Similarity=0.238  Sum_probs=56.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.++||+||+|++|...++.+...|++|+++++++++.+.+. +.+...+ .|.++.+-.+++.+....  .++|+++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~v-i~~~~~~~~~~i~~~t~~--~g~d~v~d  103 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEV-FNHREVNYIDKIKKYVGE--KGIDIIIE  103 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEE-EETTSTTHHHHHHHHHCT--TCEEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccc-cccccccHHHHhhhhhcc--CCceEEee
Confidence            5789999999999999999988889999999988877665444 4554332 466665533333332211  25899998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       104 ~~g  106 (174)
T d1yb5a2         104 MLA  106 (174)
T ss_dssp             SCH
T ss_pred             ccc
Confidence            875

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.10  E-value=4.3e-06  Score=64.17  Aligned_cols=105  Identities=21%  Similarity=0.240  Sum_probs=71.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.++||+||++++|.+.++-....|++|+.+++++++.+.+.+. +...+ .|-.+++..+++.+...  .+++|+++.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~-Ga~~v-i~~~~~~~~~~~~~~~~--~~Gvd~v~D  104 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GFDAA-FNYKTVNSLEEALKKAS--PDGYDCYFD  104 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTSCSCHHHHHHHHC--TTCEEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh-hhhhh-cccccccHHHHHHHHhh--cCCCceeEE
Confidence            489999999999999999998889999999999988776655443 43322 34444443444433321  236999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      +.|.            +               ..+..++.++.   .|+++.++....+
T Consensus       105 ~vG~------------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~  133 (182)
T d1v3va2         105 NVGG------------E---------------FLNTVLSQMKD---FGKIAICGAISVY  133 (182)
T ss_dssp             SSCH------------H---------------HHHHHGGGEEE---EEEEEECCCGGGT
T ss_pred             ecCc------------h---------------hhhhhhhhccC---CCeEEeecceeec
Confidence            8862            1               12334444543   6899998876654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.08  E-value=8.7e-06  Score=58.97  Aligned_cols=71  Identities=27%  Similarity=0.324  Sum_probs=60.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.++.+..++..|.++++.++++-      ....|.++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~------i~~a~~vv~~   72 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAG------IEDADMYIAV   72 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTT------TTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcC------hhhhhhhccc
Confidence            5889998 999999999999999999999999999988877778889999999999766651      1257877764

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.06  E-value=1.4e-05  Score=59.93  Aligned_cols=74  Identities=19%  Similarity=0.380  Sum_probs=59.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+++++.+||.|+ |++|..+++.|.+.|+ ++.++.|+.++..++...++..+..     .+++.+.+.       ..|
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~-----~~~~~~~l~-------~~D   86 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVR-----FDELVDHLA-------RSD   86 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECC-----GGGHHHHHH-------TCS
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccccc-----chhHHHHhc-------cCC
Confidence            3689999999998 9999999999999998 5889999999998888887755432     233444443       699


Q ss_pred             EEEECCcc
Q 023708           92 IMFNNAGI   99 (278)
Q Consensus        92 ~li~nag~   99 (278)
                      ++|++.+.
T Consensus        87 ivi~atss   94 (159)
T d1gpja2          87 VVVSATAA   94 (159)
T ss_dssp             EEEECCSS
T ss_pred             EEEEecCC
Confidence            99999874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.05  E-value=1.4e-05  Score=60.50  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=57.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEE-ecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIH-CDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +.|.++|.|| |.+|+.+|+.|.++|++|++.+|+.++++.+.+........ .+..+.......+.       ..|.++
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~i   72 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHDLVI   72 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT-------TSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh-------ccceeE
Confidence            3688999987 99999999999999999999999999999998877654443 45555555555443       467776


Q ss_pred             ECC
Q 023708           95 NNA   97 (278)
Q Consensus        95 ~na   97 (278)
                      ...
T Consensus        73 ~~~   75 (182)
T d1e5qa1          73 SLI   75 (182)
T ss_dssp             ECS
T ss_pred             eec
Confidence            544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.03  E-value=5.8e-06  Score=63.07  Aligned_cols=106  Identities=12%  Similarity=0.147  Sum_probs=67.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.++||+||+||.|...++-....|++|+.+++++++.+... +.+...+ .|-++ . ..+.++.+  ..+++|+++.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~v-i~~~~-~-~~~~~~~~--~~~gvD~vid  104 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEV-LARED-V-MAERIRPL--DKQRWAAAVD  104 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEE-EECC-----------C--CSCCEEEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hccccee-eecch-h-HHHHHHHh--hccCcCEEEE
Confidence            4788999999999999888888889999999998877655544 3443322 23222 1 12222211  2247999999


Q ss_pred             CCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCC
Q 023708           96 NAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGG  157 (278)
Q Consensus        96 nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  157 (278)
                      +.|-.                           .....+..++.   .|++|.++...+..+.
T Consensus       105 ~vgg~---------------------------~~~~~l~~l~~---~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         105 PVGGR---------------------------TLATVLSRMRY---GGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             CSTTT---------------------------THHHHHHTEEE---EEEEEECSCCSSSCCC
T ss_pred             cCCch---------------------------hHHHHHHHhCC---CceEEEeecccCcccC
Confidence            98732                           02233444544   6899999887765443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=1e-05  Score=61.66  Aligned_cols=77  Identities=13%  Similarity=0.186  Sum_probs=57.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~l   93 (278)
                      .|+++||+||++++|...++-....|++|+++++++++.+.+.+ ++... ..|.++++-.++    +++..  ..+|++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lGa~~-vi~~~~~d~~~~----v~~~t~g~g~d~v  101 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQ-VINYREEDLVER----LKEITGGKKVRVV  101 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSE-EEETTTSCHHHH----HHHHTTTCCEEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cCCeE-EEECCCCCHHHH----HHHHhCCCCeEEE
Confidence            47899999999999999999888899999999999888766554 45432 246666553333    33322  258999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +.+.|
T Consensus       102 ~d~~g  106 (179)
T d1qora2         102 YDSVG  106 (179)
T ss_dssp             EECSC
T ss_pred             EeCcc
Confidence            98876

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=0.00012  Score=55.11  Aligned_cols=79  Identities=18%  Similarity=0.307  Sum_probs=56.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCe-EEEecCCCHHHHHHHHHHHHhhcC-CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGR-YIHCDVTKEEDVESAVRLAVSWKG-QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~g-~id~   92 (278)
                      .+.+++|.|+ |++|...+..+...|+ +|+++++++++++.. ++++.. ++..+-.+..+..+.++   ..+| ++|+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~~~~~~~~~~~~~~~~~~~---~~~g~g~Dv  100 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIARKVE---GQLGCKPEV  100 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSEEEECSSCCHHHHHHHHH---HHHTSCCSE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCccccccccccccccccccc---ccCCCCceE
Confidence            4678999987 9999999999989998 799999998887655 445543 34434444444444443   3333 6999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.|.
T Consensus       101 vid~~G~  107 (171)
T d1pl8a2         101 TIECTGA  107 (171)
T ss_dssp             EEECSCC
T ss_pred             EEeccCC
Confidence            9999874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=1.3e-05  Score=61.15  Aligned_cols=77  Identities=19%  Similarity=0.273  Sum_probs=56.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhc--CCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWK--GQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g~id~l   93 (278)
                      .|+++||+||++++|...++.+...|++|+++.+++++.+.+. +.+...+ .|-.+++-.    +++.+..  .++|++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~v-i~~~~~~~~----~~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYV-GDSRSVDFA----DEILELTDGYGVDVV   98 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEE-EETTCSTHH----HHHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-ccccccc-ccCCccCHH----HHHHHHhCCCCEEEE
Confidence            4789999999999999999988889999999998887765554 4454432 355554423    3333333  259999


Q ss_pred             EECCc
Q 023708           94 FNNAG   98 (278)
Q Consensus        94 i~nag   98 (278)
                      +.+.|
T Consensus        99 ~d~~g  103 (183)
T d1pqwa_          99 LNSLA  103 (183)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99886

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=4.1e-05  Score=58.50  Aligned_cols=80  Identities=21%  Similarity=0.231  Sum_probs=60.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHH---Hhh----hCCeEEEecCCCHHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAAL---AST----IGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~---~~~----~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++|.++|.|+ ||.|++++..|++.|. +++++.|+.+..+.+   .++    ........|+.+.+++.+...   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            3678999999999 6999999999999998 677888875444332   222    234456689999887776654   


Q ss_pred             hhcCCccEEEECCccC
Q 023708           85 SWKGQLDIMFNNAGIS  100 (278)
Q Consensus        85 ~~~g~id~li~nag~~  100 (278)
                          ..|++||+....
T Consensus        90 ----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ----SADILTNGTKVG  101 (182)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----ccceeccccCCc
Confidence                689999998653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=0.00014  Score=55.34  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=55.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcC--CccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKG--QLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--~id~   92 (278)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... ..|.++.+ ..+..+++.+..+  ++|+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-vi~~~~~~-~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADL-TLNRRETS-VEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSE-EEETTTSC-HHHHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccceE-EEeccccc-hHHHHHHHHHhhCCCCceE
Confidence            4789999997 8999999999989998 799999998877655 4455332 23443322 3333444444332  5999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.|.
T Consensus       104 vid~vG~  110 (182)
T d1vj0a2         104 ILEATGD  110 (182)
T ss_dssp             EEECSSC
T ss_pred             EeecCCc
Confidence            9999874

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.64  E-value=7.1e-05  Score=53.95  Aligned_cols=73  Identities=21%  Similarity=0.226  Sum_probs=57.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |.++|.|+ |-+|+.+++.|.+.|++|++++.+++..+.+.+. ...++.+|.++++.++++-      ....|.+|...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~-~~~~~~gd~~~~~~l~~a~------i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLG------IRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT-CSEEEECCTTCTTHHHHHT------GGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh-CCcceeeecccchhhhccC------CccccEEEEEc
Confidence            45777766 7899999999999999999999999988877554 4567789999988776641      12578877665


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      +
T Consensus        73 ~   73 (134)
T d2hmva1          73 G   73 (134)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=4.4e-05  Score=49.52  Aligned_cols=42  Identities=21%  Similarity=0.330  Sum_probs=36.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL   57 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~   57 (278)
                      ++.++||+||++|+|...++-+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578899999999999999988888899999988887666544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=0.00017  Score=54.27  Aligned_cols=74  Identities=19%  Similarity=0.222  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|+++||+||+|++|...++.+...|++|+.+++++++.+.+. +.+...+ .|..+  ..    +++. ..+++|+++.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~-i~~~~--~~----~~~~-~~~g~D~v~d   97 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEA-ATYAE--VP----ERAK-AWGGLDLVLE   97 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEE-EEGGG--HH----HHHH-HTTSEEEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cccccee-eehhh--hh----hhhh-cccccccccc
Confidence            5789999999999999998888888999999988877665554 3454322 23322  11    2222 2346999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus        98 ~~G  100 (171)
T d1iz0a2          98 VRG  100 (171)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            765

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.53  E-value=0.00059  Score=49.86  Aligned_cols=108  Identities=18%  Similarity=0.243  Sum_probs=64.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhhC--------CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTIG--------GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++++.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+....++.        ......|.   +           .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------H
Confidence            457888896 999999999999988  479999998876554332211        22333332   1           1


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      ....|++|..+|.....    .   .+-.+.+..|+    .+++...+.+.+...++.++++|-
T Consensus        70 ~~~adivvitag~~~~~----g---~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKP----G---ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hccccEEEEecccccCC----C---CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeCC
Confidence            23689999999864221    1   22233444554    455666666666554566666653

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=0.0002  Score=56.31  Aligned_cols=80  Identities=24%  Similarity=0.239  Sum_probs=56.1

Q ss_pred             CCCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH
Q 023708           13 KRLTGKVAVITGG----------------ARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        13 ~~l~~k~vlVtGa----------------s~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   76 (278)
                      ++|+|+.+|||+|                ||.+|.++|+++.++|++|.++......      ......-...+.+.+++
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------~~p~~~~~~~~~t~~~m   75 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------PTPPFVKRVDVMTALEM   75 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------CCCTTEEEEECCSHHHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------CcccccccceehhhHHH
Confidence            5899999999987                6889999999999999999987543210      00111223455566666


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCC
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGISG  101 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~~~  101 (278)
                      .+.+.+.   ....|++|++|++..
T Consensus        76 ~~~~~~~---~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          76 EAAVNAS---VQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHHHH---GGGCSEEEECCBCCS
T ss_pred             HHHHHhh---hccceeEeeeechhh
Confidence            5555443   346899999999864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.51  E-value=0.0002  Score=53.76  Aligned_cols=80  Identities=15%  Similarity=0.276  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|.|+++++|..++..+...|. +|+++++++++.+.+.+ ++... ..|.++.+..+++.+...  -+.+|++|
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~Ga~~-~i~~~~~~~~~~~~~~~~--~~~~d~vi  102 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADY-VINASMQDPLAEIRRITE--SKGVDAVI  102 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSE-EEETTTSCHHHHHHHHTT--TSCEEEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cCCce-eeccCCcCHHHHHHHHhh--cccchhhh
Confidence            468899999999999999999988885 88888888877665544 45432 234455544444433221  13599999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .++|.
T Consensus       103 d~~g~  107 (170)
T d1jvba2         103 DLNNS  107 (170)
T ss_dssp             ESCCC
T ss_pred             ccccc
Confidence            99874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.00014  Score=55.59  Aligned_cols=78  Identities=23%  Similarity=0.264  Sum_probs=53.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEE-EEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIV-IADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +++|||+||+||+|...++-....|++++ .+++.+++...+....+... ..|..+++ ..+.++++..  .++|+++.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~-vi~~~~~~-~~~~~~~~~~--~GvDvv~D  106 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA-AVNYKTGN-VAEQLREACP--GGVDVYFD  106 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE-EEETTSSC-HHHHHHHHCT--TCEEEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE-Eeeccchh-HHHHHHHHhc--cCceEEEe
Confidence            48999999999999988887777898655 45666677666766666442 23555444 3333433322  36999998


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +.|
T Consensus       107 ~vG  109 (187)
T d1vj1a2         107 NVG  109 (187)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00022  Score=53.63  Aligned_cols=75  Identities=11%  Similarity=0.073  Sum_probs=55.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCC--eEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGG--RYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .+++||.+||.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+.-  .....+..+.            .....
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~   80 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL------------EGHEF   80 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG------------TTCCC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc------------ccccc
Confidence            3578999999997 8889999999999999999999999988888765431  1122222211            11368


Q ss_pred             cEEEECCccC
Q 023708           91 DIMFNNAGIS  100 (278)
Q Consensus        91 d~li~nag~~  100 (278)
                      |++||+....
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999987543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.40  E-value=7.7e-05  Score=57.24  Aligned_cols=82  Identities=15%  Similarity=0.151  Sum_probs=49.7

Q ss_pred             CcEEEE-eCCCChhHHHHHHHHHHcCCeEEEEecchHHHHH---HHhhhCCe-EEEecCCCHHHHHHHHHHHHh-hcCCc
Q 023708           17 GKVAVI-TGGARGIGAATAKLFAENGAHIVIADILDELGAA---LASTIGGR-YIHCDVTKEEDVESAVRLAVS-WKGQL   90 (278)
Q Consensus        17 ~k~vlV-tGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~---~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~-~~g~i   90 (278)
                      |.+++| +||+|++|.+.++-....|++||++.|..+..++   ...+++.. ++.-|-.+..+..+.+.++.+ ..+++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            444555 7999999999888887889999988765433332   23344533 333222222233334444433 33479


Q ss_pred             cEEEECCc
Q 023708           91 DIMFNNAG   98 (278)
Q Consensus        91 d~li~nag   98 (278)
                      |+++.+.|
T Consensus       109 dvv~D~vg  116 (189)
T d1gu7a2         109 KLALNCVG  116 (189)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99998875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=0.00045  Score=51.68  Aligned_cols=67  Identities=25%  Similarity=0.369  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+..+...+.. ..               ....|++|
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~-~~---------------~~~~DliI   78 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINS-LE---------------NQQADILV   78 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESC-CT---------------TCCCSEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhc-cc---------------ccchhhhe
Confidence            5688999987 8999999999999997 78999999999888887766544321 11               12589999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      |+..+
T Consensus        79 NaTpi   83 (167)
T d1npya1          79 NVTSI   83 (167)
T ss_dssp             ECSST
T ss_pred             ecccc
Confidence            88764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.36  E-value=0.00021  Score=53.99  Aligned_cols=79  Identities=15%  Similarity=0.086  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.. ++++... ..|..+++-.+++.+.. + ..++|++|
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~~-~i~~~~~~~~~~v~~~t-~-g~G~D~vi  101 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGATD-ILNYKNGHIEDQVMKLT-N-GKGVDRVI  101 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCSE-EECGGGSCHHHHHHHHT-T-TSCEEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCccc-cccccchhHHHHHHHHh-h-ccCcceEE
Confidence            4778999986 8999999988888897 688999988776554 4455322 23544443333322221 1 12599999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .++|.
T Consensus       102 d~~g~  106 (174)
T d1jqba2         102 MAGGG  106 (174)
T ss_dssp             ECSSC
T ss_pred             EccCC
Confidence            99984

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.35  E-value=1.8e-05  Score=59.78  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=64.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh--cCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW--KGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~--~g~id~l   93 (278)
                      .+.+|||+||+||+|...++-....|++|+.+++++++.+.+.+ ++...+ .|   .+   +...+....  -+++|++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~v-i~---~~---~~~~~~~~~~~~~gvd~v   94 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEV-IS---RE---DVYDGTLKALSKQQWQGA   94 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEE-EE---HH---HHCSSCCCSSCCCCEEEE
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccce-Ee---cc---chhchhhhcccCCCceEE
Confidence            35689999999999999888877889999999998776665544 343332 12   11   111111111  1369999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhh
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAI  154 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  154 (278)
                      +.+.|-            +.               +...+..++.   .|++|.++...+.
T Consensus        95 id~vgg------------~~---------------~~~~~~~l~~---~G~iv~~G~~~g~  125 (167)
T d1tt7a2          95 VDPVGG------------KQ---------------LASLLSKIQY---GGSVAVSGLTGGG  125 (167)
T ss_dssp             EESCCT------------HH---------------HHHHHTTEEE---EEEEEECCCSSCS
T ss_pred             EecCcH------------HH---------------HHHHHHHhcc---CceEEEeeccCCC
Confidence            988762            11               2233444433   6899999877753

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.28  E-value=0.00033  Score=52.66  Aligned_cols=79  Identities=23%  Similarity=0.243  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCC-CHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVT-KEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|.+++|.|+ +|+|...++.+...|+ +|+++++++++.+ +.++++...+- |.. +.+.+.+.+++..  .+++|++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa~~~i-~~~~~~~~~~~~~~~~~--~~g~D~v  102 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGATECI-NPQDFSKPIQEVLIEMT--DGGVDYS  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTCSEEE-CGGGCSSCHHHHHHHHT--TSCBSEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCCcEEE-eCCchhhHHHHHHHHHc--CCCCcEe
Confidence            4789999998 5999999999888997 5666667666654 44455643322 222 2233444444432  2479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.+.|.
T Consensus       103 id~~G~  108 (176)
T d2fzwa2         103 FECIGN  108 (176)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999873

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.24  E-value=0.00086  Score=50.30  Aligned_cols=72  Identities=15%  Similarity=0.110  Sum_probs=54.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.+.    +.....|-.              ....
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~--------------~~~~   79 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI--------------PLQT   79 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CCSC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc--------------cccc
Confidence            568899999987 788999999999988899999999999888877654    222222211              1246


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|++||+....
T Consensus        80 ~diiIN~tp~g   90 (171)
T d1p77a1          80 YDLVINATSAG   90 (171)
T ss_dssp             CSEEEECCCC-
T ss_pred             cceeeeccccc
Confidence            89999998754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.21  E-value=0.00061  Score=51.22  Aligned_cols=77  Identities=16%  Similarity=0.238  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEE-EEecchHHHHHHHhhhCC-eEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIV-IADILDELGAALASTIGG-RYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi-~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|.+++|.|+ |++|...+..+...|+.++ ++++++++.+.. ++++. .+  .|..+++ +.+.++++  ..+++|++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga~~~--i~~~~~~-~~~~i~~~--t~gg~D~v  100 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATHV--INSKTQD-PVAAIKEI--TDGGVNFA  100 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSEE--EETTTSC-HHHHHHHH--TTSCEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCCeEE--EeCCCcC-HHHHHHHH--cCCCCcEE
Confidence            4788999997 8999999988888898655 556666665554 44553 33  3554443 22223322  12479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |.+.|.
T Consensus       101 id~~G~  106 (174)
T d1f8fa2         101 LESTGS  106 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCc
Confidence            999874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00023  Score=47.86  Aligned_cols=72  Identities=19%  Similarity=0.195  Sum_probs=49.1

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH--HHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDE--LGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+....  ..+.+..  ...+..... +.+    .++       .+|
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~-~~~----~~~-------~~d   66 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSL-NDE----WLM-------AAD   66 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBC-CHH----HHH-------HCS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeeccc-chh----hhc-------cCC
Confidence            688999999998 66799999999999999999987532  1111111  233333333 222    122       589


Q ss_pred             EEEECCccC
Q 023708           92 IMFNNAGIS  100 (278)
Q Consensus        92 ~li~nag~~  100 (278)
                      .+|..+|+.
T Consensus        67 ~vi~SPGi~   75 (93)
T d2jfga1          67 LIVASPGIA   75 (93)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCCC
Confidence            999999974

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.18  E-value=0.0019  Score=47.88  Aligned_cols=76  Identities=22%  Similarity=0.269  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+ |++|...+..+...|++|+++++++++.+... +++... ..|.++.+..+++.+    ..++.+..|.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~-~i~~~~~~~~~~~~~----~~~g~~~~i~   99 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASL-TVNARQEDPVEAIQR----DIGGAHGVLV   99 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSE-EEETTTSCHHHHHHH----HHSSEEEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccc-cccccchhHHHHHHH----hhcCCccccc
Confidence            4788999886 99999999888888999999999988876554 445332 235555554444332    3345555555


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +++
T Consensus       100 ~~~  102 (166)
T d1llua2         100 TAV  102 (166)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            544

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.00092  Score=49.83  Aligned_cols=74  Identities=22%  Similarity=0.348  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.+++|.|+ |++|...++.+...|++++++++++++.+. .++++...+ .|..+.+....       ..+++|++|.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lGad~~-i~~~~~~~~~~-------~~~~~D~vid   99 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGADEV-VNSRNADEMAA-------HLKSFDFILN   99 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTCSEE-EETTCHHHHHT-------TTTCEEEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccCCcEE-EECchhhHHHH-------hcCCCceeee
Confidence            4789999986 899999888888899999999888776544 345554322 45555543221       2247999999


Q ss_pred             CCcc
Q 023708           96 NAGI   99 (278)
Q Consensus        96 nag~   99 (278)
                      +.|.
T Consensus       100 ~~g~  103 (168)
T d1uufa2         100 TVAA  103 (168)
T ss_dssp             CCSS
T ss_pred             eeec
Confidence            9874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.10  E-value=0.00091  Score=50.32  Aligned_cols=79  Identities=20%  Similarity=0.233  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCC-CHHHHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVT-KEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++.+ +.++++...+. |.. .++..+...+...  .+++|++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~Ga~~~i-~~~~~~~~~~~~~~~~~--~~G~d~v  102 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKALGATDCL-NPRELDKPVQDVITELT--AGGVDYS  102 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEEE-CGGGCSSCHHHHHHHHH--TSCBSEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHhCCCccc-CCccchhhhhhhHhhhh--cCCCcEE
Confidence            4789999975 9999999999999998 5777788777654 44555543322 222 2223344444332  2479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |-++|.
T Consensus       103 ie~~G~  108 (174)
T d1e3ia2         103 LDCAGT  108 (174)
T ss_dssp             EESSCC
T ss_pred             EEeccc
Confidence            999984

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.09  E-value=0.0013  Score=49.17  Aligned_cols=78  Identities=15%  Similarity=0.250  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .+.+++|.|+ |++|...+..+...|+ .|+++++++++.+...+.....++  |-. .+.+++..+...  ..++|++|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i--~~~-~~~~~~~~~~~~--~~g~d~vi  105 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVV--DAR-RDPVKQVMELTR--GRGVNVAM  105 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEE--ETT-SCHHHHHHHHTT--TCCEEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceee--cCc-ccHHHHHHHhhC--CCCceEEE
Confidence            3688999986 9999998888888886 566778887776655443223333  333 333444443221  12599999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .++|.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99884

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.06  E-value=0.00084  Score=50.43  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+ .+......+-..++.+.+..+...  .+++|++|
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~~--~~G~D~vi  103 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECVNPQDYKKPIQEVLTEMS--NGGVDFSF  103 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHT--TSCBSEEE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCCeeEEecCCchhHHHHHHHHHh--cCCCCEEE
Confidence            4789999999 7899999999999985 78888888887665544 343322212122233444444432  24799999


Q ss_pred             ECCcc
Q 023708           95 NNAGI   99 (278)
Q Consensus        95 ~nag~   99 (278)
                      .+.|.
T Consensus       104 d~~G~  108 (176)
T d2jhfa2         104 EVIGR  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCc
Confidence            99874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.03  E-value=0.0015  Score=49.16  Aligned_cols=78  Identities=17%  Similarity=0.247  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCC-eEEEecCCCHHH-HHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGG-RYIHCDVTKEED-VESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~-i~~~~~~~~~~~g~id~   92 (278)
                      .|.+++|+|+ ||+|...+..+...|+ +|+++++++++++...+ ++. +++  |..+.+. .+.+.+...  .+++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~i--n~~~~~~~~~~~~~~~~--g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECI--SPKDSTKPISEVLSEMT--GNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEE--CGGGCSSCHHHHHHHHH--TSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEE--CccccchHHHHHHHHhc--cccceE
Confidence            4789999986 8999999999999995 79999999888765544 443 333  2222221 222222222  237999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.02  E-value=0.0088  Score=43.37  Aligned_cols=111  Identities=17%  Similarity=0.194  Sum_probs=66.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC---------CeEEEecCCCHHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG---------GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++++.|+|+ |.+|..+|..|+.+|.  ++++.+++++..+....++.         ..+...|   .+          
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~----------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YD----------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GG----------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HH----------
Confidence            4567888897 9999999999999885  69999998776544332221         1121222   21          


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                       ....-|++|..+|......   +..    .+.+..|+    .+++.+.+.+.+-...+.++++|-..
T Consensus        71 -~l~daDvvvitag~~~~~~---~~R----~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtNPv  126 (148)
T d1ldna1          71 -DCRDADLVVICAGANQKPG---ETR----LDLVDKNI----AIFRSIVESVMASGFQGLFLVATNPV  126 (148)
T ss_dssp             -GTTTCSEEEECCSCCCCTT---TCS----GGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             -HhccceeEEEecccccccC---cch----hHHHHHHH----HHHHHHHHHHHhhCCCceEEEecCcc
Confidence             1236899999998653221   111    12233343    34555666665544367777765433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.01  E-value=0.0037  Score=45.30  Aligned_cols=114  Identities=16%  Similarity=0.201  Sum_probs=67.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC---CeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG---GRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++.|+||+|.+|.++|..|+.+|.  ++++.+.++.+...+ +...   ......-+ ...+..+.+       ...|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~~~~~~~~~~-~~~~~~~~~-------~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIETRATVKGYL-GPEQLPDCL-------KGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSSSSCEEEEEE-SGGGHHHHH-------TTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhhhhcCCCeEE-cCCChHHHh-------CCCCEE
Confidence            588999999999999999999985  688888876543322 1111   11112222 233333333       269999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      |..||....  +  ..+..   +.++.|+.-    ++.+.+.+.+...++.++++|...
T Consensus        73 Vitag~~~~--~--g~sR~---~ll~~N~~i----~~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          73 VIPAGVPRK--P--GMTRD---DLFNTNATI----VATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             EECCSCCCC--T--TCCGG---GGHHHHHHH----HHHHHHHHHHHCTTSEEEECSSCH
T ss_pred             EECCCcCCC--C--CCCcc---hHHHHHHHH----HHHHHHHHHhcCCCeEEEEecCch
Confidence            999996322  1  11222   235555544    445555555544367788876544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.00  E-value=0.00042  Score=52.41  Aligned_cols=45  Identities=22%  Similarity=0.386  Sum_probs=37.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG   62 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~   62 (278)
                      +.++||+||+||+|...++-....|++|+.+++++++.+.+. .++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lG   76 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLG   76 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHT
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhc
Confidence            458999999999999888888888999999998887765554 444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.99  E-value=0.0039  Score=45.95  Aligned_cols=116  Identities=14%  Similarity=0.125  Sum_probs=71.1

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-------GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      ..+.++++.|.|+ |.+|..+|..|+.+|.  ++++.+++++..+....++.       ...+.. -.+.+         
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~-~~d~~---------   84 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA-DKDYS---------   84 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE-CSSGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEe-ccchh---------
Confidence            3456678888896 9999999999999985  79999998766644332221       111111 11221         


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                        ....-|++|..||....+    ..+.   .+.++.|+    .+++.+.+.+.+...++.++++|-..
T Consensus        85 --~~~~adiVVitAg~~~~~----g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          85 --VTANSKIVVVTAGVRQQE----GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             --GGTTCSEEEECCSCCCCT----TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             --hcccccEEEEecCCcccc----Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCCch
Confidence              123689999999964222    1121   13333444    35666777776655467788776544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.95  E-value=0.00063  Score=50.81  Aligned_cols=76  Identities=18%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+... +++...+. |..+....   .   ....+.+|.++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i-~~~~~~~~---~---~~~~~~~d~vi~   97 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYI-ATLEEGDW---G---EKYFDTFDLIVV   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEE-EGGGTSCH---H---HHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEe-eccchHHH---H---HhhhcccceEEE
Confidence            5789999987 89999988887788999999999887766554 44543221 22221111   1   122347899998


Q ss_pred             CCccC
Q 023708           96 NAGIS  100 (278)
Q Consensus        96 nag~~  100 (278)
                      +.+..
T Consensus        98 ~~~~~  102 (168)
T d1piwa2          98 CASSL  102 (168)
T ss_dssp             CCSCS
T ss_pred             EecCC
Confidence            87753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.91  E-value=0.005  Score=44.64  Aligned_cols=114  Identities=16%  Similarity=0.090  Sum_probs=65.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-------Ce-EEEecCCCHHHHHHHHHHHHhhc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-------GR-YIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-------~~-~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |++.|+|+ |.+|..+|..|+.+|.  ++++.+.++++.+....++.       .. .+..  .+.+           ..
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~--~d~~-----------~l   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI--NDWA-----------AL   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE--SCGG-----------GG
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec--cCHH-----------Hh
Confidence            56778895 9999999999999884  79999988776553332211       11 1111  1222           12


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ..-|++|..||.....   .+-+-.+=.+.++.|.    .+++.+.+.+.+...++.++++|-..
T Consensus        68 ~~adiVVitaG~~~~~---~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtNPv  125 (146)
T d1hyha1          68 ADADVVISTLGNIKLQ---QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISNPV  125 (146)
T ss_dssp             TTCSEEEECCSCGGGT---C-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             ccccEEEEeccccccc---cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecCcH
Confidence            3689999999864211   1111111122344443    45677777777655467777765433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.79  E-value=0.0019  Score=47.50  Aligned_cols=118  Identities=19%  Similarity=0.175  Sum_probs=66.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           17 GKVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      .+++.|.|+ |.+|..+|..|+..+ .++++.+.+++..+.....+       +.......-++.   ++.+       .
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~---~~~~-------~   75 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSY---EAAL-------T   75 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSH---HHHH-------T
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCch---hhhh-------c
Confidence            477888897 999999999998888 48999987765544333221       111111111122   2222       2


Q ss_pred             CccEEEECCccCCCCCC-cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           89 QLDIMFNNAGISGSGGS-ITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        89 ~id~li~nag~~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      .-|++|..+|....++. -.+.+..   +.+..|+.    +++...+.+.+...++.++++|...
T Consensus        76 ~adiVvitag~~~~~g~~~~~~tR~---~l~~~n~~----iv~~i~~~i~~~~p~aiviivsNPv  133 (154)
T d1pzga1          76 GADCVIVTAGLTKVPGKPDSEWSRN---DLLPFNSK----IIREIGQNIKKYCPKTFIIVVTNPL  133 (154)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             CCCeEEEecccccCCCCCCcccchh---hhhhhhHH----HHHHHHHHHHhcCCCcEEEEeCCcH
Confidence            68999999987533221 1122322   23334443    3455555555544467777776543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.78  E-value=0.0015  Score=48.07  Aligned_cols=110  Identities=14%  Similarity=0.119  Sum_probs=60.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC---------eEEEEecchHHHHHHHhhhC------CeEEEecCCCHHHHHHHHHHH
Q 023708           19 VAVITGGARGIGAATAKLFAENGA---------HIVIADILDELGAALASTIG------GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~---------~Vi~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      +|.|+||+|.+|.+++..|+..+.         .++...+..+..........      ...+... .+.   .+.    
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~----   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT-DDP---KVA----   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---HHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC-Cch---hhh----
Confidence            799999999999999999998653         12223444444444332211      1112221 111   122    


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-cCCCcEEEEecC
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTSS  150 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~~iv~vsS  150 (278)
                         +...|++|..+|....    ...+.++   .++.|+    .+++.+.+.+.+ ......++++|-
T Consensus        78 ---~~~advViitaG~~~~----pg~~r~d---l~~~N~----~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          78 ---FKDADYALLVGAAPRK----AGMERRD---LLQVNG----KIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---TTTCSEEEECCCCCCC----TTCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---cccccEEEeecCcCCC----CCCcHHH---HHHHHH----HHHHHHHHHHHHhCCCCcEEEEecC
Confidence               2379999999997522    2233333   344444    345556666655 232456666653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.78  E-value=0.0036  Score=45.54  Aligned_cols=79  Identities=15%  Similarity=0.054  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      +-|++.|.||.|-+|..+|+.|.+.|++|.+.+|+.....+.... ...++. ......++...+.++.....+=.+++.
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-NADVVI-VSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-TCSEEE-ECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-hccccc-cccchhhheeeeecccccccCCceEEE
Confidence            447899999999999999999999999999999976444333222 222222 223455566677766654332234443


Q ss_pred             C
Q 023708           96 N   96 (278)
Q Consensus        96 n   96 (278)
                      .
T Consensus        86 ~   86 (152)
T d2pv7a2          86 L   86 (152)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.72  E-value=0.0084  Score=43.18  Aligned_cols=108  Identities=19%  Similarity=0.168  Sum_probs=63.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC---------CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG---------GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      |++.|.|+ |.+|.++|..|+.++. ++++.+.+++.......++.         ..+..++  |.+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~--d~~-----------~~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTN--NYA-----------DT   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecC--cHH-----------Hh
Confidence            46677786 9999999999998874 89999887665443322211         1111111  111           11


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      ..-|++|..||....+    .   .+-.+.++.|+    .+++...+.+.+...++.++++|-
T Consensus        68 ~~advvvitag~~~~~----~---~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKP----G---MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCc----C---cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            2689999999964221    1   22233444554    467778888877554667777644

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.69  E-value=0.0053  Score=42.31  Aligned_cols=47  Identities=21%  Similarity=0.329  Sum_probs=36.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch-HHHHHHHhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD-ELGAALAST   60 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~-~~~~~~~~~   60 (278)
                      .+++||++||.|++. +|..-++.|++.|++|++.+... +....+.+.
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~   55 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQFTVWANE   55 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTT
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCChHHHHHHhc
Confidence            478999999999865 99999999999999999876543 334444433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.66  E-value=0.023  Score=40.72  Aligned_cols=108  Identities=19%  Similarity=0.136  Sum_probs=65.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecc--hHHHHH----HHhhh--C--CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADIL--DELGAA----LASTI--G--GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~--~~~~~~----~~~~~--~--~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++.|+||+|.+|.++|..|..++.  ++++.+..  ++..+.    +....  .  ......|   .+           .
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~-----------~   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE-----------D   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG-----------G
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH-----------H
Confidence            578999999999999999999985  68888743  333321    21111  1  2222222   22           1


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      ...-|++|..||....  +  ..+.   .+.++.|.    .+++.+.+.+.+...++.++++|-.
T Consensus        68 ~~~aDiVvitaG~~~~--~--g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ--P--GQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCCC--T--TCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             hhhcCEEEEecccccc--c--CCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEecCh
Confidence            2368999999996422  1  1222   33455554    4567777888775546777776543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.64  E-value=0.006  Score=46.48  Aligned_cols=116  Identities=13%  Similarity=0.099  Sum_probs=67.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      .|.+|+|.|+ +++|...+..+...|+ +|+++++++++++.. ++.+...+ .|-.+.+ +.+.+.++. .-..+|++|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga~~~-~~~~~~~-~~~~i~~~t-~g~g~D~vi   99 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEIA-DLSLDTP-LHEQIAALL-GEPEVDCAV   99 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCEEE-ETTSSSC-HHHHHHHHH-SSSCEEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccccEE-EeCCCcC-HHHHHHHHh-CCCCcEEEE
Confidence            4789999986 8999888887777787 688888888776544 44454432 2433433 333333222 123699999


Q ss_pred             ECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           95 NNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        95 ~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      .+.|.-....+..-.           +..+.-..++.++..++.   .|++++++-
T Consensus       100 d~vG~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~r~---gG~v~~~G~  141 (195)
T d1kola2         100 DAVGFEARGHGHEGA-----------KHEAPATVLNSLMQVTRV---AGKIGIPGL  141 (195)
T ss_dssp             ECCCTTCBCSSTTGG-----------GSBCTTHHHHHHHHHEEE---EEEEEECSC
T ss_pred             ECccccccCCcccce-----------eecCcHHHHHHHHHHHhc---CCEEEEeee
Confidence            998843221111100           111222344555555544   679998874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.61  E-value=0.0075  Score=44.37  Aligned_cols=76  Identities=21%  Similarity=0.235  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .+.+++|.|+ |++|...++.+...|++|+++++++++.+...+ .+...+ .|-.+.+..+.+    .+.....|.+|.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~Ga~~~-~~~~~~~~~~~~----~~~~~~~~~~v~   99 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLV-VNPLKEDAAKFM----KEKVGGVHAAVV   99 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEE-ECTTTSCHHHHH----HHHHSSEEEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-cCccee-cccccchhhhhc----ccccCCCceEEe
Confidence            4678999875 999999888888899999999998888765544 555443 344443322222    222235566666


Q ss_pred             CCc
Q 023708           96 NAG   98 (278)
Q Consensus        96 nag   98 (278)
                      +++
T Consensus       100 ~~~  102 (168)
T d1rjwa2         100 TAV  102 (168)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.58  E-value=0.0071  Score=43.60  Aligned_cols=112  Identities=20%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-CeEEE--ecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-GRYIH--CDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-~~~~~--~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      ++.|.|+ |.+|..++..|+.++.  ++++.+++++..+....++. ...+.  ..+...         -.+....-|++
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---------~~~~~~~adiv   72 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---------DYSDVKDCDVI   72 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----------CGGGGTTCSEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---------cHHHhCCCceE
Confidence            4556687 9999999999999875  79999988765443332222 00000  000100         01123468999


Q ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           94 FNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        94 i~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      |..||.....    ..+   -.+.++.|+    .+++.+.+.+.+...++.++++|-.
T Consensus        73 vitag~~~~~----~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          73 VVTAGANRKP----GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             EECCCC----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             EEecccccCc----Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecCh
Confidence            9999864221    112   234455555    4555566666654435677776543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.57  E-value=0.0036  Score=46.95  Aligned_cols=113  Identities=10%  Similarity=0.030  Sum_probs=61.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecch--HHHHHHHhhh-CC---eEEEecCCCHHHHHHHHHHH
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA-------HIVIADILD--ELGAALASTI-GG---RYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~~-~~---~~~~~D~~~~~~i~~~~~~~   83 (278)
                      .-+|.||||+|.||.+++..|++...       .+.+.+..+  +.++.+.-++ ..   .....-.++.  ..+     
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~--~~~-----   96 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGID--PYE-----   96 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESC--HHH-----
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccccc--chh-----
Confidence            34699999999999999999998532       344555543  3333332221 11   1111111111  112     


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-cCCCcEEEEec
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTS  149 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~~iv~vs  149 (278)
                        .+...|++|..+|....    ...+.   .+.++.|.    .+++.+.+.+.+ .+....|++++
T Consensus        97 --~~~~aDvVvi~ag~~rk----pg~tR---~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          97 --VFEDVDWALLIGAKPRG----PGMER---AALLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --HTTTCSEEEECCCCCCC----TTCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --hccCCceEEEeeccCCC----CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence              23479999999987422    22333   34555554    345666666655 23245666664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0065  Score=44.19  Aligned_cols=72  Identities=11%  Similarity=0.076  Sum_probs=54.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh---hCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEE
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST---IGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++|.|. +.+|..+++.|.++|.+|++++.+++...+..+.   .++.++..|.++++.++++-      ..+.+.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEE
Confidence            4778887 6999999999999999999998876554433332   25788999999988666542      125788886


Q ss_pred             CC
Q 023708           96 NA   97 (278)
Q Consensus        96 na   97 (278)
                      ..
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            65

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.55  E-value=0.011  Score=43.40  Aligned_cols=77  Identities=13%  Similarity=0.086  Sum_probs=52.6

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------------CeEEEecCCCHHHHHHHH---HHHH
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------------GRYIHCDVTKEEDVESAV---RLAV   84 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------------~~~~~~D~~~~~~i~~~~---~~~~   84 (278)
                      +-|. |.|-+|..+|+.|++.|++|++.+|+++..+++.+...            ..++-.-+.+.+++++++   +.+.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            4444 45899999999999999999999999888777654321            445556677777777776   2233


Q ss_pred             hhcCCccEEEECC
Q 023708           85 SWKGQLDIMFNNA   97 (278)
Q Consensus        85 ~~~g~id~li~na   97 (278)
                      ....+=.++|.+.
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            3333334555443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.54  E-value=0.021  Score=40.86  Aligned_cols=106  Identities=17%  Similarity=0.111  Sum_probs=63.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC--------CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG--------GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ++.|.|+ |.+|..++..|+.++.  ++++.+.+++..+....++.        ......   +.+           ...
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYA-----------DLK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGG-----------GGT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHH-----------Hhc
Confidence            4566796 8999999999998874  79999988766554332211        122111   221           123


Q ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           89 QLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        89 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      .-|++|..||.....    ..+..   +.+..|.    .+++.+.+.+.+...++.++++|-
T Consensus        67 ~adivvitag~~~~~----g~~r~---dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP----GETRL---QLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCS----SCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCC----Ccchh---hhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence            689999999864322    22222   2334443    356667777766444667777653

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.51  E-value=0.0006  Score=51.35  Aligned_cols=43  Identities=21%  Similarity=0.152  Sum_probs=38.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      +|++-|.|+ |.+|.++|..|+++|++|.+.+|+++..+.+.+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478899998 8999999999999999999999998888776654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.50  E-value=0.023  Score=40.76  Aligned_cols=108  Identities=17%  Similarity=0.154  Sum_probs=63.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-------CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-------GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++.|+|+ |.+|.++|..|+.+|.  ++++.++++++.+....++.       ...+... .+.+   .        ...
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~-~~~~---~--------~~d   69 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-DDPE---I--------CRD   69 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-SCGG---G--------GTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC-CCHH---H--------hhC
Confidence            4667797 9999999999999985  79999988876553322211       1111111 1111   1        125


Q ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           90 LDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        90 id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      -|++|..||....    ...+..   +.+..|.    .+++...+.+.+...++.++++|-
T Consensus        70 aDvVVitaG~~~~----~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          70 ADMVVITAGPRQK----PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             CSEEEECCCCCCC----TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CcEEEEecccccC----CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence            8999999996422    122332   3455555    345555666655443567777653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.47  E-value=0.015  Score=42.66  Aligned_cols=76  Identities=13%  Similarity=0.017  Sum_probs=51.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-------------CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-------------GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-------------~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +.|.|. |-+|.++|+.|.+.|++|++.+|+++..+...+...             ...+-.- ...++++++++++.+.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila-vp~~~~~~vl~~l~~~   80 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC-TPIQLILPTLEKLIPH   80 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC-SCHHHHHHHHHHHGGG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc-CcHhhhhhhhhhhhhh
Confidence            556655 999999999999999999999999887776554321             1111111 2356788888887665


Q ss_pred             cCCccEEEECC
Q 023708           87 KGQLDIMFNNA   97 (278)
Q Consensus        87 ~g~id~li~na   97 (278)
                      ..+=.+++..+
T Consensus        81 l~~~~iv~~~~   91 (165)
T d2f1ka2          81 LSPTAIVTDVA   91 (165)
T ss_dssp             SCTTCEEEECC
T ss_pred             cccccceeecc
Confidence            44444555443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.018  Score=42.16  Aligned_cols=114  Identities=16%  Similarity=0.137  Sum_probs=67.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC-------Ce-EEEecCCCHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG-------GR-YIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~-------~~-~~~~D~~~~~~i~~~~~~~   83 (278)
                      .++..++.|+|+ |.+|..+|..|+.+|.  ++++.+++++..+....++.       .. .+..  .+.+         
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~---------   83 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYN---------   83 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGG---------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchh---------
Confidence            345556888896 9999999999999985  79999988766553332221       11 1111  1211         


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                        ....-|++|..||......    .+..   +.++.|+    .+.+.+.+.+.+...++.++++|-..
T Consensus        84 --~~~~adivvitag~~~~~~----~~R~---dll~~N~----~i~~~i~~~i~~~~p~~ivivvtNPv  139 (159)
T d2ldxa1          84 --VSANSKLVIITAGARMVSG----QTRL---DLLQRNV----AIMKAIVPGVIQNSPDCKIIVVTNPV  139 (159)
T ss_dssp             --GGTTEEEEEECCSCCCCTT----TCSS---CTTHHHH----HHHHHHTTTHHHHSTTCEEEECSSSH
T ss_pred             --hhccccEEEEecccccCCC----CCHH---HHHHHHH----HHHHHHHHHHhccCCCeEEEEeCCcH
Confidence              2236899999998643221    1111   1123333    34556666666545467788776543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.45  E-value=0.019  Score=42.70  Aligned_cols=79  Identities=13%  Similarity=0.045  Sum_probs=57.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------------------CCeEEEecCCCHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI--------------------GGRYIHCDVTKEEDVE   77 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~i~   77 (278)
                      +.|-|.|- |-+|..+|++|++.|++|++.+|++++.+++.+..                    ....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34666665 89999999999999999999999998888775431                    0234455666777788


Q ss_pred             HHHHHHHhhcCCccEEEECC
Q 023708           78 SAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~na   97 (278)
                      ++.+.+.....+=+++|...
T Consensus        82 ~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHhccccCcEEEecC
Confidence            88877776554445666554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.42  E-value=0.0043  Score=46.38  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCCeEEEecCCCHH-HHHHHHHHHHhhcCCccEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGGRYIHCDVTKEE-DVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~id~l   93 (278)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++++++++... +++.+.+ .|.++.+ .+.+.....  ..+++|++
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~-i~~~~~d~~~~~~~~~~--~~~G~d~v  101 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATEC-LNPKDYDKPIYEVICEK--TNGGVDYA  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEE-ECGGGCSSCHHHHHHHH--TTSCBSEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEE-EcCCCchhHHHHHHHHh--cCCCCcEE
Confidence            5789999986 8999999999998997 6888888887765554 4454332 2333222 133333222  22479999


Q ss_pred             EECCcc
Q 023708           94 FNNAGI   99 (278)
Q Consensus        94 i~nag~   99 (278)
                      |-+.|.
T Consensus       102 id~~g~  107 (174)
T d1p0fa2         102 VECAGR  107 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCC
Confidence            998874

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.40  E-value=0.026  Score=40.58  Aligned_cols=33  Identities=27%  Similarity=0.350  Sum_probs=29.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecch
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILD   51 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~   51 (278)
                      ++.|+||+|.+|..+|..|+.+|.  ++++.++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            488999999999999999999984  899998875

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.013  Score=42.37  Aligned_cols=114  Identities=18%  Similarity=0.230  Sum_probs=63.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-C--CeEEEEecchHHHHHHHhhhC---CeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           19 VAVITGGARGIGAATAKLFAEN-G--AHIVIADILDELGAALASTIG---GRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~-g--~~Vi~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      ++.|+|++|.+|.++|..|+.+ +  .++++.+..+....+..+...   ...... +...++.+. ++       .-|+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~-~~-------~aDv   72 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDATPA-LE-------GADV   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHHH-HT-------TCSE
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCccc-cC-------CCCE
Confidence            5789999999999999988643 4  578998876432222222111   111111 122222222 21       5899


Q ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           93 MFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        93 li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      +|..||....  +  ..+.   .+.++.|..    +++...+.+.+...++.++++|...
T Consensus        73 vvitaG~~~k--~--g~~R---~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          73 VLISAGVRRK--P--GMDR---SDLFNVNAG----IVKNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             EEECCSCCCC--T--TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             EEECCCccCC--C--Ccch---hhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccCCc
Confidence            9999997422  1  1122   233455543    4555556665544467777776544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.09  E-value=0.0049  Score=46.14  Aligned_cols=47  Identities=36%  Similarity=0.392  Sum_probs=39.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI   61 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~   61 (278)
                      .++++|.+||.|+ ||.+++++..|.+.| +|.+..|+.++.+.+.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            3589999999986 678999999998777 8999999988888776543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.00  E-value=0.051  Score=40.16  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=35.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      |+.+|  |.|-+|.++|++|++.|++|++.+|++++.+.+.+.
T Consensus         3 kIGvI--GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           3 DVGVV--GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             SEEEE--CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEE--eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            44444  678999999999999999999999999988887654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0073  Score=45.88  Aligned_cols=41  Identities=27%  Similarity=0.400  Sum_probs=35.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      |++.|.|| |-+|..+|..++..|++|++.+++++.++...+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            67899998 779999999999999999999999877665544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.00  E-value=0.014  Score=43.31  Aligned_cols=78  Identities=15%  Similarity=0.273  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhCC-eEEEecCCCHH-HHHHHHHHHHhhcCCccE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIGG-RYIHCDVTKEE-DVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~-~i~~~~~~~~~~~g~id~   92 (278)
                      .+.+++|.|+ +|+|...+..+...|. +|+++++++++++...+ ++. +++  |..+++ ..++..+...  .+++|+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd~~i--n~~~~~~~~~~~~~~~~--~~G~d~  101 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFV--NPNDHSEPISQVLSKMT--NGGVDF  101 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCEEE--CGGGCSSCHHHHHHHHH--TSCBSE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCcEEE--cCCCcchhHHHHHHhhc--cCCcce
Confidence            4788999986 6677778888888876 67888888877765544 453 333  332222 1233333222  247999


Q ss_pred             EEECCcc
Q 023708           93 MFNNAGI   99 (278)
Q Consensus        93 li~nag~   99 (278)
                      ++-+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999874

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.95  E-value=0.086  Score=37.48  Aligned_cols=107  Identities=21%  Similarity=0.311  Sum_probs=62.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CeEEEEecchHHHHHHHhhh---------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENG--AHIVIADILDELGAALASTI---------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g--~~Vi~~~r~~~~~~~~~~~~---------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.|+|| |.+|..++..|+..|  .++++.+.+++..+......         ...+...  .+.++           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            3667796 999999999999988  48999998876554332111         1222222  12221           2


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecC
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSS  150 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  150 (278)
                      ...|++|..+|.....+    .+.   .+.++.|..    +++.+.+.+.+...++.++++|-
T Consensus        68 ~dadvvvitag~~~~~g----~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG----MTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTT----CCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCC----Cch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEecC
Confidence            36899999999743221    122   233444443    34555555555343566666644

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.92  E-value=0.054  Score=39.48  Aligned_cols=63  Identities=14%  Similarity=0.135  Sum_probs=46.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------------CeEEEecCCCHHHHHHHHHH
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------------GRYIHCDVTKEEDVESAVRL   82 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------------~~~~~~D~~~~~~i~~~~~~   82 (278)
                      +|-+. |.|-+|.++|++|++.|++|.+.+|+.+..+.+.....            ...+..-+.+.+.++.++..
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~   77 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLD   77 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHS
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhc
Confidence            34455 56899999999999999999999999887776553321            34566667777777777643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.82  E-value=0.037  Score=41.51  Aligned_cols=39  Identities=26%  Similarity=0.222  Sum_probs=33.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL   57 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~   57 (278)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.++..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            55888998 7899999999999999999999988766544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.74  E-value=0.064  Score=38.67  Aligned_cols=114  Identities=18%  Similarity=0.189  Sum_probs=65.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhh-------C--CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           18 KVAVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTI-------G--GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~-------~--~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .++-|.|+ |.+|.++|..|...+ .++++.+++++..+....++       +  ..+...+  +.           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence            35777785 999999999888877 47889998775544332221       1  1222222  11           122


Q ss_pred             CCccEEEECCccCCCCCCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCch
Q 023708           88 GQLDIMFNNAGISGSGGSI-TSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSA  152 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  152 (278)
                      ..-|++|..+|....++.. .+.+.   .+.++.|.    .+++.+.+.+.+...++.++++|-..
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtNPv  128 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTNPV  128 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCch
Confidence            3689999999965332211 11111   22344443    45666666666644466777775443

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.69  E-value=0.0083  Score=42.26  Aligned_cols=70  Identities=17%  Similarity=0.228  Sum_probs=51.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |.++|.|. +.+|..+++.|  +|.+|++++.+++..+.+.. .++.++.+|.++++.++++-      ..+.+.+|...
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~------i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKAN------VRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTT------CTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhh------hhcCcEEEEec
Confidence            45778875 77899999999  46678888888877766643 47889999999988766641      23577887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.63  E-value=0.015  Score=44.46  Aligned_cols=46  Identities=30%  Similarity=0.415  Sum_probs=39.3

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      .+|+||+++|-| .|.+|.++|+.|.+.|++|++++.+.+.......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~   68 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA   68 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh
Confidence            368999999987 7789999999999999999999988776665543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.47  E-value=0.14  Score=36.36  Aligned_cols=108  Identities=19%  Similarity=0.205  Sum_probs=63.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhh-------C--CeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           19 VAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTI-------G--GRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~-------~--~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      ++.|.|+ |.+|.++|..|+.+|.  ++++.+.+++..+....++       .  ......  .|.+           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~-----------~~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH-----------Hh
Confidence            4667786 9999999999998884  6999998876654322111       1  111111  1111           12


Q ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCc
Q 023708           88 GQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSS  151 (278)
Q Consensus        88 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~  151 (278)
                      ..-|++|..||....+    ..+.   .+.+..|.    .+++...+.+.+...++.++++|-.
T Consensus        68 ~~adiVvitag~~~~~----g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1ojua1          68 KGSEIIVVTAGLARKP----GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTNP  120 (142)
T ss_dssp             TTCSEEEECCCCCCCS----SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             ccccEEEEeccccCCC----CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecCC
Confidence            3689999999864222    2222   23333343    4566677777664446677776543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.46  E-value=0.025  Score=43.97  Aligned_cols=71  Identities=20%  Similarity=0.226  Sum_probs=53.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   92 (278)
                      .+|.||+++|-| .|.+|.++|+.|.+.|++|++++.+...........+...+.     .++   ++      .-+.|+
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~-----~~~---~~------~~~cDI   99 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVA-----PNA---IY------GVTCDI   99 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECC-----GGG---TT------TCCCSE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccC-----Ccc---cc------cccccE
Confidence            468999999876 578999999999999999999998888887777665543321     111   11      126888


Q ss_pred             EEECCc
Q 023708           93 MFNNAG   98 (278)
Q Consensus        93 li~nag   98 (278)
                      ++-||.
T Consensus       100 l~PcA~  105 (230)
T d1leha1         100 FAPCAL  105 (230)
T ss_dssp             EEECSC
T ss_pred             eccccc
Confidence            888885

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.39  E-value=0.045  Score=40.18  Aligned_cols=80  Identities=25%  Similarity=0.337  Sum_probs=59.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIM   93 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   93 (278)
                      .....+++|.|+ +--|.+.++.....|+.|.+.+.+.++++.+.....- .+.+-.++.+.+++.++       ..|++
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-~~~~~~~~~~~l~~~~~-------~aDiv   99 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-RVELLYSNSAEIETAVA-------EADLL   99 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-GSEEEECCHHHHHHHHH-------TCSEE
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-cceeehhhhhhHHHhhc-------cCcEE
Confidence            345678999987 4678888999999999999999999888877765432 23344566776766665       68999


Q ss_pred             EECCccCCC
Q 023708           94 FNNAGISGS  102 (278)
Q Consensus        94 i~nag~~~~  102 (278)
                      |..+-+.+.
T Consensus       100 I~aalipG~  108 (168)
T d1pjca1         100 IGAVLVPGR  108 (168)
T ss_dssp             EECCCCTTS
T ss_pred             EEeeecCCc
Confidence            998876543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.23  E-value=0.12  Score=37.52  Aligned_cols=79  Identities=13%  Similarity=0.023  Sum_probs=52.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--eEEEEecchHHHHHHHhhhC---------------CeEEEecCCCHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA--HIVIADILDELGAALASTIG---------------GRYIHCDVTKEEDVESAV   80 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~--~Vi~~~r~~~~~~~~~~~~~---------------~~~~~~D~~~~~~i~~~~   80 (278)
                      |.++|.|. |-||..+|+.|.+.|+  +|+..+++++..+...+...               ...+-+ ....+++.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            45888875 9999999999999996  68888998877766544321               111111 12356788888


Q ss_pred             HHHHhhcCCccEEEECCc
Q 023708           81 RLAVSWKGQLDIMFNNAG   98 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag   98 (278)
                      +++......=.+++..++
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            887766544445554443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.22  E-value=0.025  Score=40.95  Aligned_cols=59  Identities=15%  Similarity=0.215  Sum_probs=45.6

Q ss_pred             CCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           25 GARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        25 as~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      |.|-+|.++++.|.+.|+++++.+|+.++.+++.++.++.+.    .+   .+++++       .-|++|.+.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~~---~~~~~~-------~~dvIilav   65 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----MS---HQDLID-------QVDLVILGI   65 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----SS---HHHHHH-------TCSEEEECS
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----ch---hhhhhh-------ccceeeeec
Confidence            678999999999999999999999999888888777664432    12   333343       589888664

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.18  E-value=0.0088  Score=43.35  Aligned_cols=36  Identities=17%  Similarity=0.355  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEec
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADI   49 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r   49 (278)
                      .+++||++||.|| |.+|..-++.|++.|++|++++.
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999999 56999999999999999998864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.15  E-value=0.0066  Score=45.14  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=52.8

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-CeEEEecC--CCHHHHHHHHHHHHhhcCC
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-GRYIHCDV--TKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~--~~~~~i~~~~~~~~~~~g~   89 (278)
                      .+++||.++|.|-|.=+|+-++..|+++|++|..+...........+... ......|+  ...+.+++...       .
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~-------~   97 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------D   97 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccc-------c
Confidence            37999999999999999999999999999999987653211000000000 01111222  24555666554       4


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|++|..+|..
T Consensus        98 aDIvIsavG~p  108 (171)
T d1edza1          98 SDVVITGVPSE  108 (171)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEEccCCC
Confidence            89999888864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.93  E-value=0.01  Score=43.28  Aligned_cols=112  Identities=17%  Similarity=0.175  Sum_probs=60.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------eEEEEecch--HHHHHHHhhh---C-CeEEEecCCCHHHHHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAENGA-------HIVIADILD--ELGAALASTI---G-GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~~---~-~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .+|.|+||+|.+|.+++..|+..+.       .+++.+..+  +..+.+..+.   . ........++..  .+.+    
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~----   77 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKE--EIAF----   77 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCH--HHHT----
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccc--cccc----
Confidence            3699999999999999999987652       355555443  3333332111   1 112222222211  1222    


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-cCCCcEEEEec
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE-GQRKGSIICTS  149 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~~iv~vs  149 (278)
                         ...|++|..+|....+    ..+.+   +.++.|.    .+++.+.+.+.+ .+..+.++++|
T Consensus        78 ---~~~dvVVitag~~~~~----g~sr~---dll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 ---KDLDVAILVGSMPRRD----GMERK---DLLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ---TTCSEEEECCSCCCCT----TCCTT---TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---CCceEEEEecccCCCC----CCchh---HHHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence               3699999999865322    11222   2334444    455666666655 34345566654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.79  E-value=0.043  Score=40.98  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=34.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ...+.||++.|.|... ||+.+++.+...|++|+..+|..
T Consensus        37 ~~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          37 IPLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCcccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence            3468999999999765 99999999999999999988753

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.75  E-value=0.062  Score=40.65  Aligned_cols=38  Identities=21%  Similarity=0.402  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .++.||++.|.|- |.||+.+|+.|...|++|+..++..
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            5789999999985 7899999999999999999988654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.024  Score=41.92  Aligned_cols=47  Identities=19%  Similarity=0.224  Sum_probs=39.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      .+++||.++|.|-|.-+|+-++..|.++|++|.++........+...
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~~   81 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVN   81 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHT
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHHh
Confidence            46899999999999999999999999999999998765544444433

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.16  Score=34.41  Aligned_cols=70  Identities=13%  Similarity=0.202  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ...++.|.| +|=+|+-++.+..+.|+++++.+.+++.-   ...+.-.++..|..|.+.+.++....     .+|++-
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P---A~~va~~~i~~~~~d~~~l~~~~~~~-----~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP---AMHVAHRSHVINMLDGDALRRVVELE-----KPHYIV   79 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG---GGGGSSEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc---hhhcCCeEEECCCCCHHHHHHHHHhh-----CCceEE
Confidence            345799999 57899999999999999999998765421   12233457889999999999887643     688885

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.71  E-value=0.045  Score=41.44  Aligned_cols=72  Identities=21%  Similarity=0.229  Sum_probs=52.9

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhhC-CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAALASTIG-GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ..++.||+||=.|+++|+   ++..++..|+ +|+.++.+++..+...+... +.++.+|+.+.             .++
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l-------------~~~  107 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------------SGK  107 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC-------------CCC
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhc-------------CCc
Confidence            357899999999987773   3345777786 59999988877765554433 67888887532             258


Q ss_pred             ccEEEECCcc
Q 023708           90 LDIMFNNAGI   99 (278)
Q Consensus        90 id~li~nag~   99 (278)
                      +|++|.|...
T Consensus       108 fD~Vi~NPPf  117 (197)
T d1ne2a_         108 YDTWIMNPPF  117 (197)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEeCccc
Confidence            9999999754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.042  Score=40.20  Aligned_cols=40  Identities=30%  Similarity=0.435  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL   53 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~   53 (278)
                      ..|.||+++|.|-. -+|+.+|+.|...|++|++++.++..
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            35789999999854 89999999999999999999988643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.63  E-value=0.025  Score=41.56  Aligned_cols=45  Identities=13%  Similarity=0.095  Sum_probs=37.7

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHH
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAAL   57 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~   57 (278)
                      .++.||.++|.|-|.-+|+-++..|.++|++|.++........+.
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            468999999999999999999999999999999886654333333

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.55  E-value=0.056  Score=38.88  Aligned_cols=45  Identities=27%  Similarity=0.282  Sum_probs=37.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcC-CeEEEEecchHHHHHHHhhhCCeE
Q 023708           20 AVITGGARGIGAATAKLFAENG-AHIVIADILDELGAALASTIGGRY   65 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~   65 (278)
                      +.+.|+ |-+|.++++.|.+.| ++|.+.+|++++.+.+.++.++..
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~   48 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET   48 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc
Confidence            556666 999999999999888 899999999999988888766543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.52  E-value=0.019  Score=41.90  Aligned_cols=33  Identities=9%  Similarity=0.064  Sum_probs=30.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecchH
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADILDE   52 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~   52 (278)
                      +++|.|+ |.+|..++..|++.|++|.+.+|+++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            5788888 99999999999999999999998764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.49  E-value=0.052  Score=38.06  Aligned_cols=72  Identities=18%  Similarity=0.333  Sum_probs=52.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEE-ecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIA-DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~na   97 (278)
                      ++.|.|++|.+|+++++.+.++|++++.. +++..      +.+.-.=+-.|++.++...+.++...+.  ++-+|+-..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~DVvIDFS~p~~~~~~l~~~~~~--~~p~ViGTT   73 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPDVVIDFSSPEALPKTVDLCKKY--RAGLVLGTT   73 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCSEEEECSCGGGHHHHHHHHHHH--TCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCCEEEEecCHHHHHHHHHHHHhc--CCCEEEEcC
Confidence            48999999999999999999999988754 33211      1111112457999999999999988776  566777555


Q ss_pred             c
Q 023708           98 G   98 (278)
Q Consensus        98 g   98 (278)
                      |
T Consensus        74 G   74 (128)
T d1vm6a3          74 A   74 (128)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.18  E-value=0.077  Score=39.96  Aligned_cols=38  Identities=24%  Similarity=0.296  Sum_probs=33.4

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ...+.||++.|.| -|.||+.+|+.|...|++|+..++.
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~   81 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPY   81 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTT
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCc
Confidence            3578999999996 5789999999999999999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.10  E-value=0.094  Score=37.01  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCeEEE-EecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           19 VAVITGGARGIGAATAKLFAEN-GAHIVI-ADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~-g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++.|.|++|.+|+++++.+.+. ++.++. .++.+. ...... .+.. +-.|++.++.+.+.++...+.  ++-+||-.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~-~~~D-vvIDFS~p~~~~~~~~~~~~~--~~~~ViGT   75 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVGT   75 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHT-TTCS-EEEECCCTTTHHHHHHHHHHT--TCEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhcc-ccCC-EEEEcccHHHHHHHHHHHHhc--CCCEEEec
Confidence            4789999999999999987764 577765 344322 222221 1222 557999999999999888765  56677744


Q ss_pred             Cc
Q 023708           97 AG   98 (278)
Q Consensus        97 ag   98 (278)
                      .|
T Consensus        76 TG   77 (135)
T d1yl7a1          76 TG   77 (135)
T ss_dssp             CC
T ss_pred             cc
Confidence            44

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.10  E-value=0.095  Score=39.61  Aligned_cols=38  Identities=29%  Similarity=0.395  Sum_probs=33.1

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ..++.+|++.|.|. |.||+.+++.|...|++|+..++.
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   77 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPY   77 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCc
Confidence            35788999999985 679999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.94  E-value=0.076  Score=39.62  Aligned_cols=39  Identities=28%  Similarity=0.303  Sum_probs=34.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ...+.+|++.|.| .|.||+++++.+...|.+|+..++..
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            4568899999988 68999999999999999999988754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.16  Score=40.75  Aligned_cols=24  Identities=21%  Similarity=0.254  Sum_probs=21.3

Q ss_pred             CChhHHHHHHHHHHcCCeEEEEec
Q 023708           26 ARGIGAATAKLFAENGAHIVIADI   49 (278)
Q Consensus        26 s~giG~~ia~~L~~~g~~Vi~~~r   49 (278)
                      ||..|.++|++|..+|+.|+++.+
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             chHHHHHHHHHHHHcCCEEEEEec
Confidence            467999999999999999998753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=93.49  E-value=0.31  Score=39.06  Aligned_cols=52  Identities=21%  Similarity=0.266  Sum_probs=31.9

Q ss_pred             cEEEEeCCCChhHH-----HHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecC
Q 023708           18 KVAVITGGARGIGA-----ATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDV   70 (278)
Q Consensus        18 k~vlVtGas~giG~-----~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~   70 (278)
                      |+++|++|++| |.     +++++|.++|++|..++........+....+..+...+.
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~   57 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRI   57 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEEC
Confidence            45666665545 55     689999999999987665433333444444444444443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.23  E-value=0.52  Score=31.86  Aligned_cols=80  Identities=13%  Similarity=0.115  Sum_probs=55.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHH-HHHHHHHHHHhhcCCccEEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEE-DVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~id~li~   95 (278)
                      ||++||.--..-+-..+...|.+.|++|+..+.+....-+...+.....+-+|+.=++ +--++++++++....+-+++.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~G~e~~~~ir~~~~~~pvi~l   80 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC   80 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence            6899999999999999999999999999865555433333444445666667766322 234566777776666666655


Q ss_pred             C
Q 023708           96 N   96 (278)
Q Consensus        96 n   96 (278)
                      .
T Consensus        81 s   81 (118)
T d1u0sy_          81 S   81 (118)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.24  Score=36.86  Aligned_cols=38  Identities=29%  Similarity=0.215  Sum_probs=33.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ..++.++++.|. |.|.||+.+++.+...|++|+..++.
T Consensus        39 ~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d1sc6a1          39 SFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIE   76 (188)
T ss_dssp             CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccccceEEEEe-ecccchhhhhhhcccccceEeecccc
Confidence            347889999998 56899999999999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.92  E-value=0.22  Score=37.21  Aligned_cols=38  Identities=29%  Similarity=0.168  Sum_probs=33.0

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ..++++|++.|.|. |.||+.+++.+...|.+|+..++.
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   79 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTH   79 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccc
Confidence            45788999999975 789999999999999999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.92  E-value=0.33  Score=31.33  Aligned_cols=67  Identities=18%  Similarity=0.163  Sum_probs=44.7

Q ss_pred             EEEEeCCCChhHH-HHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEe-cCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 023708           19 VAVITGGARGIGA-ATAKLFAENGAHIVIADILDELGAALASTIGGRYIHC-DVTKEEDVESAVRLAVSWKGQLDIMFNN   96 (278)
Q Consensus        19 ~vlVtGas~giG~-~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~-D~~~~~~i~~~~~~~~~~~g~id~li~n   96 (278)
                      ++-+.| -+|+|. ++|+.|.++|+.|...++.+....+..+..++.++.. |..+              ....|.+|..
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--------------i~~~d~vV~S   67 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADN--------------WYDPDLVIKT   67 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTS--------------CCCCSEEEEC
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccc--------------cCCCCEEEEe
Confidence            344554 456666 6899999999999999987644444445556655432 2222              1368999999


Q ss_pred             CccC
Q 023708           97 AGIS  100 (278)
Q Consensus        97 ag~~  100 (278)
                      .++.
T Consensus        68 sAI~   71 (89)
T d1j6ua1          68 PAVR   71 (89)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            9874

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.68  E-value=0.058  Score=40.51  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=35.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      +.+.|.||+ ..|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            568888864 589999999999999999999999888877653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.35  E-value=0.29  Score=36.76  Aligned_cols=72  Identities=19%  Similarity=0.223  Sum_probs=50.0

Q ss_pred             cCCCCCcEEEEeCCCCh-hHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHH
Q 023708           12 SKRLTGKVAVITGGARG-IGAATAKLFAENGA-HIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~g-iG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ..+++|+++|=.|+++| +|.    .++.+|+ .|++++.+++..+...+.+     ...++..|+.+.           
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            45789999999997655 443    4456786 7999999887776655432     245666675331           


Q ss_pred             hhcCCccEEEECCccC
Q 023708           85 SWKGQLDIMFNNAGIS  100 (278)
Q Consensus        85 ~~~g~id~li~nag~~  100 (278)
                        .+++|++|.|+...
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              35899999998653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.32  E-value=0.14  Score=37.46  Aligned_cols=115  Identities=12%  Similarity=0.110  Sum_probs=60.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-----CCeEEEEecchHHHHHHHhhh-------C--CeEEEecCCCHHHHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAEN-----GAHIVIADILDELGAALASTI-------G--GRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~-----g~~Vi~~~r~~~~~~~~~~~~-------~--~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      -++.|.||++.-...+...|+..     +.++++.+.++++++......       .  ......  +|   .++.+   
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal---   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF---   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH---
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc---
Confidence            35667787654332333444432     247999999988776433221       1  122211  12   22233   


Q ss_pred             HhhcCCccEEEECCccCCCCCCcccCCHHHHHHHHHHH----------------hHHHHHHHHHHHHHHHccCCCcEEEE
Q 023708           84 VSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN----------------LNGILHGIKHAAKAMIEGQRKGSIIC  147 (278)
Q Consensus        84 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N----------------~~~~~~l~~~~~~~~~~~~~~~~iv~  147 (278)
                          ..-|+||+.+|.....    .   .+-.+.+..|                ......+++.+.+.+.+...++-+++
T Consensus        76 ----~~AD~Vvitag~~~~~----g---~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~  144 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVGKYA----M---RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLN  144 (167)
T ss_dssp             ----SSCSEEEECCCTTHHH----H---HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             ----CCCCEEEECCCcCCCC----c---eeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEE
Confidence                2799999999864221    1   2222233333                12334566777777777554677777


Q ss_pred             ecCc
Q 023708          148 TSSS  151 (278)
Q Consensus       148 vsS~  151 (278)
                      +|-.
T Consensus       145 ~TNP  148 (167)
T d1u8xx1         145 YSNP  148 (167)
T ss_dssp             CCSC
T ss_pred             eCCH
Confidence            6543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.19  E-value=0.45  Score=35.09  Aligned_cols=86  Identities=16%  Similarity=0.144  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHH---------------HHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDV---------------ESAV   80 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i---------------~~~~   80 (278)
                      ..-.++|.|| +-.|.+.++.....|+.|.+.+.+.++.+++.... ..++..+..+.+..               ...-
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~-~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG-GKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT-CEECCC-----------------------CCHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh-cceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            3457888887 56788999999999999999999888777776543 33433332222211               1122


Q ss_pred             HHHHhhcCCccEEEECCccCCCC
Q 023708           81 RLAVSWKGQLDIMFNNAGISGSG  103 (278)
Q Consensus        81 ~~~~~~~g~id~li~nag~~~~~  103 (278)
                      +.+.+...+.|++|..+-+.+..
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHhhhhheeeeecCCcc
Confidence            33333345799999888765443

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.07  E-value=0.24  Score=36.31  Aligned_cols=70  Identities=13%  Similarity=0.154  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC------------------CeEEEecCCCHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG------------------GRYIHCDVTKEEDVE   77 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~------------------~~~~~~D~~~~~~i~   77 (278)
                      .+++||..|++.|   ..+..|+++|++|+.++.++..++...+..+                  ..++.+|..+.....
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            5789999999887   3777899999999999999988887766542                  356677776644221


Q ss_pred             HHHHHHHhhcCCccEEEECC
Q 023708           78 SAVRLAVSWKGQLDIMFNNA   97 (278)
Q Consensus        78 ~~~~~~~~~~g~id~li~na   97 (278)
                      .         ...|.++...
T Consensus        97 ~---------~~~D~i~~~~  107 (201)
T d1pjza_          97 I---------GHCAAFYDRA  107 (201)
T ss_dssp             H---------HSEEEEEEES
T ss_pred             c---------cceeEEEEEe
Confidence            1         1577776543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=1.1  Score=31.89  Aligned_cols=64  Identities=17%  Similarity=0.133  Sum_probs=43.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCeEEEE--ecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAEN--GAHIVIA--DILDELGAALASTIGGRYIHCDVTKEEDVESAVRLA   83 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~--~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   83 (278)
                      |.+.|.|+||-||.....-+.+.  .++|++.  .++-+.+.+...+++..++..  .|++..+.+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i--~d~~~~~~l~~~l   69 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVM--DDEASAKLLKTML   69 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEE--SSHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhccccc--ccHHHHHHHHHHh
Confidence            67999999999999999888775  4677753  456666777777777655443  3444444433333

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.92  E-value=0.34  Score=32.71  Aligned_cols=34  Identities=26%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            367888876 7899999999999999999998765

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.79  E-value=0.22  Score=36.05  Aligned_cols=39  Identities=28%  Similarity=0.384  Sum_probs=34.2

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHH
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDEL   53 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~   53 (278)
                      -+.||+++|.|- |-+|+.+|++|...|++|+++..++-.
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            468999999984 679999999999999999999988743

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.78  E-value=0.77  Score=32.60  Aligned_cols=76  Identities=13%  Similarity=0.079  Sum_probs=49.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhC-----------CeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIG-----------GRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~-----------~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      +-+.|- |-+|..+|++|++.|+.++ ..|+.++..+..+...           ...+-..+.+.+++....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTLV-WNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEEE-ECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEEE-EeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 8899999999999888765 5666665555544432           23344556677778877777766544


Q ss_pred             CccEEEECC
Q 023708           89 QLDIMFNNA   97 (278)
Q Consensus        89 ~id~li~na   97 (278)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            445555444

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.45  E-value=0.053  Score=42.41  Aligned_cols=36  Identities=25%  Similarity=0.486  Sum_probs=30.9

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      .|++++|+|.| .||+|.+++..|++.|. ++++++.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            47789999999 68899999999999998 67777644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.42  E-value=0.23  Score=36.94  Aligned_cols=38  Identities=21%  Similarity=0.142  Sum_probs=33.3

Q ss_pred             cCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           12 SKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        12 ~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      ..++.++++.|.| .|.||+++++.|...|.+|+..++.
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRH   76 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSS
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeec
Confidence            3478899999998 5789999999999999999998874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.32  E-value=0.75  Score=34.88  Aligned_cols=41  Identities=17%  Similarity=0.174  Sum_probs=34.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHh
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAS   59 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~   59 (278)
                      .+++||..|+..|   ..+..|+++|++|+.++-++..++...+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~   85 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFT   85 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            5789999998876   3688889999999999999888776544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.29  E-value=0.31  Score=39.50  Aligned_cols=76  Identities=13%  Similarity=0.048  Sum_probs=49.2

Q ss_pred             CCCcEEEEeCCC-ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh------CCeEEEecCCCHHHHHHHHHHHHhhc
Q 023708           15 LTGKVAVITGGA-RGIGAATAKLFAENGAHIVIADILDELGAALASTI------GGRYIHCDVTKEEDVESAVRLAVSWK   87 (278)
Q Consensus        15 l~~k~vlVtGas-~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~   87 (278)
                      .+|++||=.++. |+++.+    +++.+..|+.++.++..++...+..      ++.++..|..+      +.+......
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            578899988875 454443    3455778999999987777654432      24566666533      333333344


Q ss_pred             CCccEEEECCccC
Q 023708           88 GQLDIMFNNAGIS  100 (278)
Q Consensus        88 g~id~li~nag~~  100 (278)
                      .+.|.||.++...
T Consensus       214 ~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         214 ERFDLVVLDPPAF  226 (318)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             cCCCEEEEcCCcc
Confidence            5799999998654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.04  E-value=0.18  Score=34.57  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=29.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      +|.++|.|| |.+|.++|..|.++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            567777765 7999999999999999999998765

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.97  E-value=0.2  Score=37.63  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=34.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST   60 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~   60 (278)
                      +.|. |.|.+|..+|..|++.|++|++.+.+++..+.+.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc
Confidence            4444 789999999999999999999999999888877654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.80  E-value=0.27  Score=36.19  Aligned_cols=39  Identities=21%  Similarity=0.343  Sum_probs=30.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecc--hHHHHHHH
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADIL--DELGAALA   58 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~--~~~~~~~~   58 (278)
                      ++.|.|+ |..|.++|..|++.|.+|.+.+|.  ++..+.+.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~   42 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS   42 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh
Confidence            4667776 789999999999999999999884  33344443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.78  E-value=0.28  Score=37.74  Aligned_cols=71  Identities=10%  Similarity=0.040  Sum_probs=52.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ...++++|=.|++.|.   ++..|+++|.+|+.++.+++.++...+.     .++.++..|+.+.+           ..+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence            4567889999998875   7788899999999999998877655443     24778888876532           124


Q ss_pred             CccEEEECCc
Q 023708           89 QLDIMFNNAG   98 (278)
Q Consensus        89 ~id~li~nag   98 (278)
                      ++|++++..+
T Consensus       101 ~fD~i~~~~~  110 (246)
T d1y8ca_         101 KFDLITCCLD  110 (246)
T ss_dssp             CEEEEEECTT
T ss_pred             cccccceeee
Confidence            7999987544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.75  E-value=0.21  Score=35.67  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=28.9

Q ss_pred             CcEEEEe-CCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVIT-GGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVt-Gas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ++.++|. .+++.||.++|..|+++|.+|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555555 4678999999999999999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.73  E-value=0.17  Score=38.79  Aligned_cols=33  Identities=27%  Similarity=0.308  Sum_probs=28.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .|.|+|.|| |-.|..+|..|+++|++|.+++|.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            356888886 678999999999999999999875

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.55  E-value=0.39  Score=35.03  Aligned_cols=114  Identities=13%  Similarity=0.141  Sum_probs=61.2

Q ss_pred             EEEEeCCC-ChhHHHHHHHHHHc----CCeEEEEecchHHHHHHHhhh-------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           19 VAVITGGA-RGIGAATAKLFAEN----GAHIVIADILDELGAALASTI-------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        19 ~vlVtGas-~giG~~ia~~L~~~----g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      ++.|.||+ .|...++...|+..    +.++++.+.++++++......       +..+--.-.+|   .++.++     
T Consensus         4 KI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td---~~eaL~-----   75 (171)
T d1obba1           4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMN---LDDVII-----   75 (171)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHT-----
T ss_pred             EEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCC---hhhccc-----
Confidence            46677762 24444555556543    458999999988766433211       11111111122   233332     


Q ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHHH------------------------hHHHHHHHHHHHHHHHccCCC
Q 023708           87 KGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVN------------------------LNGILHGIKHAAKAMIEGQRK  142 (278)
Q Consensus        87 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~N------------------------~~~~~~l~~~~~~~~~~~~~~  142 (278)
                        ..|++|+.++....         +.+.+...+.                        .....-+++.+.+.+.+...+
T Consensus        76 --dad~Vv~~~~~g~~---------~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~  144 (171)
T d1obba1          76 --DADFVINTAMVGGH---------TYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPK  144 (171)
T ss_dssp             --TCSEEEECCCTTHH---------HHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred             --CCCeEeeecccccc---------cceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcC
Confidence              79999999876422         2222211111                        123556777888888775546


Q ss_pred             cEEEEecCc
Q 023708          143 GSIICTSSS  151 (278)
Q Consensus       143 ~~iv~vsS~  151 (278)
                      +.++++|-.
T Consensus       145 a~~i~~TNP  153 (171)
T d1obba1         145 AWYLQAANP  153 (171)
T ss_dssp             CEEEECSSC
T ss_pred             eEEEEECCh
Confidence            777777544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.52  E-value=0.36  Score=32.99  Aligned_cols=34  Identities=21%  Similarity=0.396  Sum_probs=29.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.|| |.||.++|..|.+.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            367888875 7899999999999999999988764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.33  E-value=0.24  Score=34.03  Aligned_cols=35  Identities=34%  Similarity=0.540  Sum_probs=29.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      +.|.++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            457777775 57999999999999999999998764

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.27  E-value=2.5  Score=31.12  Aligned_cols=145  Identities=13%  Similarity=0.099  Sum_probs=80.0

Q ss_pred             CCCCcEEEEeCCC--ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           14 RLTGKVAVITGGA--RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        14 ~l~~k~vlVtGas--~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      ...+.++++....  ..+..+++..|.+.|..|+.+.-..+                  .+.+.+.   + .....+.++
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------~~~~~l~---~-~~~~~~~~~   79 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR------------------CGRDELA---E-RLRSVGEVA   79 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT------------------CCHHHHH---H-HHTTSCCCS
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc------------------cCHHHHH---H-HhhccCCCC
Confidence            3456655555433  34777888889999988876533211                  1222222   2 223446789


Q ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHccCCCcEEEEecCchhhcCCCCCchhhhhHHHHH
Q 023708           92 IMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAII  171 (278)
Q Consensus        92 ~li~nag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  171 (278)
                      .||+..+.........+.        ....+...+.++|++.    +.+...++.+++....... .....-....+++-
T Consensus        80 ~vv~l~~~~~~~~~~~~~--------~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~  146 (209)
T d2fr1a2          80 GVLSLLAVDEAEPEEAPL--------ALASLADTLSLVQAMV----SAELGCPLWTVTESAVATG-PFERVRNAAHGALW  146 (209)
T ss_dssp             EEEECTTTTCCCCSSCGG--------GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCSS-TTSCCSCGGGHHHH
T ss_pred             eEEEeCCCCCCCCcchhH--------HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCcccC-CCcccCCHhHHhHH
Confidence            999987754222111111        1112344455555543    2233456777665433222 22223356788999


Q ss_pred             HHHHHHHHHHCCCCcEEEEecC
Q 023708          172 GLARSTACELGKHGIRVNCISP  193 (278)
Q Consensus       172 ~l~~~l~~e~~~~~i~v~~v~p  193 (278)
                      +|.++++.|+....+++..+.+
T Consensus       147 Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         147 GVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             HHHHHHHHHCGGGEEEEEEECT
T ss_pred             HHHHHHHHhCCCceEEEEECCC
Confidence            9999999999754455555533

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.70  E-value=0.23  Score=34.17  Aligned_cols=34  Identities=21%  Similarity=0.208  Sum_probs=29.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.||+ .||.++|..|.+.|.+|.++.|.+
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            3778888875 799999999999999999998864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.63  E-value=0.9  Score=34.61  Aligned_cols=69  Identities=16%  Similarity=0.146  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----CCeEEEecCCCHHHHHHHHHHHHhhcCCc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----GGRYIHCDVTKEEDVESAVRLAVSWKGQL   90 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   90 (278)
                      .++++|=.|+++|   ..+..|+++|++|++++.+++.++...+..     ++.++..|+.+.+           .-+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----------~~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----------FKNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----------CCSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----------ccccc
Confidence            4678999998876   356778999999999999988776655432     4778888876532           11368


Q ss_pred             cEEEECCc
Q 023708           91 DIMFNNAG   98 (278)
Q Consensus        91 d~li~nag   98 (278)
                      |.+++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.60  E-value=0.23  Score=35.34  Aligned_cols=35  Identities=11%  Similarity=0.061  Sum_probs=27.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHH
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADILDELGA   55 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~   55 (278)
                      +-|. |.|-+|.++|+.|.+.|++|+..++..+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            3444 5699999999999999999998877654433

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.58  E-value=0.21  Score=39.20  Aligned_cols=35  Identities=31%  Similarity=0.400  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD   48 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~   48 (278)
                      .++++|+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            368999999998 69999999999999999999764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.15  E-value=0.19  Score=37.03  Aligned_cols=34  Identities=18%  Similarity=0.213  Sum_probs=28.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGA-HIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~   51 (278)
                      +|+|+|.|| |-.|..+|..|+++|+ .|.+..+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            577888876 6889999999999998 588887654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.95  E-value=0.26  Score=33.55  Aligned_cols=34  Identities=18%  Similarity=0.071  Sum_probs=29.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467777775 7899999999999999999998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.91  E-value=0.68  Score=31.90  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCC-h---------hHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHh
Q 023708           16 TGKVAVITGGAR-G---------IGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        16 ~~k~vlVtGas~-g---------iG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      ..|++||.|+.. -         -+.+.+++|.+.|++++++..+.+....-.+.  ..-+..+--..+.+.++++.   
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~lYfePlt~e~v~~Ii~~---   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADATYIEPIHWEVVRKIIEK---   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSEEECSCCCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cceeeeecCCHHHHHHHHHH---
Confidence            348899999853 2         35678889999999999987776543221111  12344455567778887764   


Q ss_pred             hcCCccEEEECCc
Q 023708           86 WKGQLDIMFNNAG   98 (278)
Q Consensus        86 ~~g~id~li~nag   98 (278)
                        .++|.++.-.|
T Consensus        81 --E~pd~il~~~G   91 (127)
T d1a9xa3          81 --ERPDAVLPTMG   91 (127)
T ss_dssp             --HCCSEEECSSS
T ss_pred             --hCcCCeEEEee
Confidence              27999886665

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.90  E-value=0.29  Score=36.12  Aligned_cols=37  Identities=22%  Similarity=0.211  Sum_probs=31.4

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ..+.|.|+|.|| |.-|.+.|..|+++|++|++.++..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            346788999986 5779999999999999999998754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.80  E-value=0.35  Score=32.92  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=29.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .+.++|.|| |.||.++|..|++.|.+|.++.+.+
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            477888875 7999999999999999999987754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.75  E-value=0.08  Score=45.03  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=29.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      |++.+|||.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            56778999998 6799999999999998 78887654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=88.49  E-value=0.98  Score=36.22  Aligned_cols=75  Identities=13%  Similarity=0.013  Sum_probs=47.4

Q ss_pred             CCcEEEEeCCCC-hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGAR-GIGAATAKLFAENGAHIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas~-giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      +++.||=..+.+ +++.    .+++.|+.|+.++.++..++...+..        ++.++..|+.      +.++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            467788777654 4443    34567999999998877766554321        1345655542      344444444


Q ss_pred             cCCccEEEECCccC
Q 023708           87 KGQLDIMFNNAGIS  100 (278)
Q Consensus        87 ~g~id~li~nag~~  100 (278)
                      -.+.|+||.++..+
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            45799999987644

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.20  E-value=0.36  Score=32.66  Aligned_cols=33  Identities=18%  Similarity=0.320  Sum_probs=28.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      |.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777664 7899999999999999999998864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.11  E-value=2.2  Score=27.53  Aligned_cols=71  Identities=17%  Similarity=0.235  Sum_probs=45.6

Q ss_pred             CCcEEEEeCCC-ChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhhcCCccEEE
Q 023708           16 TGKVAVITGGA-RGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        16 ~~k~vlVtGas-~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      +.|.+.+.|-. .|+ .++|+.|.++|+.|...++......+...+.++.+...+-  ++.+           .+.|.+|
T Consensus         7 ~~~~ihfiGigG~GM-s~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~~i-----------~~~d~vV   72 (96)
T d1p3da1           7 RVQQIHFIGIGGAGM-SGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHA--EEHI-----------EGASVVV   72 (96)
T ss_dssp             TCCEEEEETTTSTTH-HHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCC--GGGG-----------TTCSEEE
T ss_pred             hCCEEEEEEECHHHH-HHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCc--cccC-----------CCCCEEE
Confidence            35778888753 344 4479999999999999998643333333334665544332  2111           2689999


Q ss_pred             ECCccC
Q 023708           95 NNAGIS  100 (278)
Q Consensus        95 ~nag~~  100 (278)
                      ...++.
T Consensus        73 ~S~AI~   78 (96)
T d1p3da1          73 VSSAIK   78 (96)
T ss_dssp             ECTTSC
T ss_pred             ECCCcC
Confidence            998874

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.98  E-value=0.7  Score=33.11  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeE---EEecCC---CHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRY---IHCDVT---KEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~~D~~---~~~~i~~~~~~~~~~~g~   89 (278)
                      +|+.+.|.+.|||.|.-++..+.+.|.++--  -.++..+++.+.+.-..   -.+|+.   +.+...++++.+.+. ..
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-PN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-TT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-CC
Confidence            5788999999999999999999999976643  34444555554443111   134443   566677777666654 56


Q ss_pred             ccEEEECC
Q 023708           90 LDIMFNNA   97 (278)
Q Consensus        90 id~li~na   97 (278)
                      +|.++...
T Consensus        79 vd~v~v~~   86 (163)
T d2csua3          79 VDMLIAIC   86 (163)
T ss_dssp             CSEEEEEE
T ss_pred             cCEEEEee
Confidence            88765443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.89  E-value=0.35  Score=37.54  Aligned_cols=35  Identities=26%  Similarity=0.421  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD   48 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~   48 (278)
                      .+++||+++|-| .|..|.++|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999986 88999999999999999998765

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.89  E-value=0.43  Score=38.05  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEe
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAENGAHIVIAD   48 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~   48 (278)
                      .+|++|+++|-|- |.+|.++|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4789999999886 7999999999999999999865

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.88  E-value=2.2  Score=28.48  Aligned_cols=79  Identities=10%  Similarity=0.080  Sum_probs=55.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhcCCccEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWKGQLDIMF   94 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~g~id~li   94 (278)
                      ||+|||.--...+-..+.+.|.+.|++|..+...++..+.+. +.....+-+|+.  +.+. -++++++++....+-+++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~-~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~pvi~   78 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVT-KERPDLVLLDMKIPGMDG-IEILKRMKVIDENIRVII   78 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHH-HHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHH-hCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCCcEEE
Confidence            578999999999999999999999999998776555555444 335556666666  4433 356667776655566665


Q ss_pred             ECC
Q 023708           95 NNA   97 (278)
Q Consensus        95 ~na   97 (278)
                      ..+
T Consensus        79 lt~   81 (119)
T d1peya_          79 MTA   81 (119)
T ss_dssp             EES
T ss_pred             Eec
Confidence            543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.59  E-value=0.65  Score=35.69  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=29.5

Q ss_pred             CCCCCcEEEEeCCCChhHHHHHHHHHH-cCCeEEEEe
Q 023708           13 KRLTGKVAVITGGARGIGAATAKLFAE-NGAHIVIAD   48 (278)
Q Consensus        13 ~~l~~k~vlVtGas~giG~~ia~~L~~-~g~~Vi~~~   48 (278)
                      .++++++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            368899988875 89999999999975 599998764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=87.45  E-value=1.1  Score=31.89  Aligned_cols=51  Identities=16%  Similarity=0.149  Sum_probs=38.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc--CCeEEEE--ecchHHHHHHHhhhCCeEEE
Q 023708           17 GKVAVITGGARGIGAATAKLFAEN--GAHIVIA--DILDELGAALASTIGGRYIH   67 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~--g~~Vi~~--~r~~~~~~~~~~~~~~~~~~   67 (278)
                      .|.+.|.|+||-||.....-+.+.  .++|++.  .++-+.+.+...+++..++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~   56 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAV   56 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccce
Confidence            488999999999999998888764  5777753  45666666666666655543

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.33  E-value=1.9  Score=29.06  Aligned_cols=80  Identities=11%  Similarity=0.084  Sum_probs=55.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |+..++||.--...+...+...|.+.|++|..+...++..+.+ +......+-+|+.  +.+ =.++++++++.+..+-+
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l-~~~~~dlii~D~~mp~~~-G~el~~~l~~~~~~~pi   78 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL-ASKTPDVLLSDIRMPGMD-GLALLKQIKQRHPMLPV   78 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHH-TTCCCSEEEECCSSSSST-THHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHH-HhCCCCEEEehhhcCCch-HHHHHHHHHHhCCCCeE
Confidence            3456799999999999999999999999999877666555444 3345666777765  222 23456677766655655


Q ss_pred             EEEC
Q 023708           93 MFNN   96 (278)
Q Consensus        93 li~n   96 (278)
                      ++..
T Consensus        79 I~~t   82 (123)
T d1krwa_          79 IIMT   82 (123)
T ss_dssp             EESC
T ss_pred             EEEe
Confidence            5543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.23  E-value=0.23  Score=39.40  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=29.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      +.|.|+|.||. --|..+|..|+++|++|++.++.+
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999875 559999999999999999997653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.72  E-value=0.55  Score=31.54  Aligned_cols=34  Identities=18%  Similarity=0.307  Sum_probs=28.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            35666665 58999999999999999999987754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.69  E-value=0.42  Score=36.44  Aligned_cols=35  Identities=20%  Similarity=0.377  Sum_probs=29.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      -.+|.++|.||+ --|...|..|+++|++|.+.++.
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeec
Confidence            467899999974 55899999999999999998654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.44  E-value=0.34  Score=36.35  Aligned_cols=30  Identities=13%  Similarity=0.233  Sum_probs=26.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      |+|.| +|--|..+|..|+++|.+|.++++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCC
Confidence            78888 5777999999999999999998764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.20  E-value=3.7  Score=32.74  Aligned_cols=75  Identities=17%  Similarity=0.113  Sum_probs=46.9

Q ss_pred             CCcEEEEeCC-CChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh--------CCeEEEecCCCHHHHHHHHHHHHh
Q 023708           16 TGKVAVITGG-ARGIGAATAKLFAENGA-HIVIADILDELGAALASTI--------GGRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        16 ~~k~vlVtGa-s~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      .|+.||=..+ +|+++.+    +++.|+ .|+.++.++..++...+..        ++.++..|+.      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5788887776 5555543    455787 5888888876665444322        1456676653      23444444


Q ss_pred             hcCCccEEEECCccC
Q 023708           86 WKGQLDIMFNNAGIS  100 (278)
Q Consensus        86 ~~g~id~li~nag~~  100 (278)
                      ...+.|++|..+..+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            445799999997644

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=86.19  E-value=0.38  Score=37.32  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=27.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      +|+|+|.|| |--|..+|.+|++.|++|++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578888876 456888999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.05  E-value=0.45  Score=32.51  Aligned_cols=34  Identities=18%  Similarity=0.364  Sum_probs=29.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            467888875 7999999999999999999998865

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.95  E-value=0.25  Score=37.00  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=27.0

Q ss_pred             cEEEEeCCCChhHH-----HHHHHHHHcCCeEEEEe
Q 023708           18 KVAVITGGARGIGA-----ATAKLFAENGAHIVIAD   48 (278)
Q Consensus        18 k~vlVtGas~giG~-----~ia~~L~~~g~~Vi~~~   48 (278)
                      |.++|||-++|.|+     ++|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999989997     56888999999999864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=85.88  E-value=0.44  Score=38.30  Aligned_cols=35  Identities=31%  Similarity=0.397  Sum_probs=28.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ++|.++|.|| |--|..+|..|++.|++|.+.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            4688899986 4568889999999999999986543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=85.81  E-value=0.75  Score=30.97  Aligned_cols=35  Identities=20%  Similarity=0.355  Sum_probs=29.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .+|.++|.|| |.+|.++|..|.+.|..|.++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4677887765 7999999999999999999988764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.72  E-value=2.5  Score=33.79  Aligned_cols=75  Identities=13%  Similarity=0.050  Sum_probs=47.1

Q ss_pred             CCcEEEEeCCC-ChhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh---C----CeEEEecCCCHHHHHHHHHHHHhh
Q 023708           16 TGKVAVITGGA-RGIGAATAKLFAENGA-HIVIADILDELGAALASTI---G----GRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        16 ~~k~vlVtGas-~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~---~----~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .|++||=.++. |+++.+    +++.|+ .|+.++.+++..+...+..   +    ++++..|+.      +........
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            37888888864 555544    446676 7999999887766554322   2    345555543      233333334


Q ss_pred             cCCccEEEECCccC
Q 023708           87 KGQLDIMFNNAGIS  100 (278)
Q Consensus        87 ~g~id~li~nag~~  100 (278)
                      ..++|++|.++...
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            45799999998654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.66  E-value=4.7  Score=28.79  Aligned_cols=114  Identities=12%  Similarity=0.008  Sum_probs=62.0

Q ss_pred             EEEEeCC-CChhHHHHHHHHHHcC----CeEEEEecchHH--HHHHH-------hhhCCeEEEecCCCHHHHHHHHHHHH
Q 023708           19 VAVITGG-ARGIGAATAKLFAENG----AHIVIADILDEL--GAALA-------STIGGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        19 ~vlVtGa-s~giG~~ia~~L~~~g----~~Vi~~~r~~~~--~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      ++.|.|| |.|.+..++.-+....    -++++.+.+++.  ++.+-       ...+........+|..   +.+    
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~---~al----   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRR---RAL----   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH---HHH----
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCch---hhc----
Confidence            4667776 6677777777666542    378899987643  33221       1112222222333432   222    


Q ss_pred             hhcCCccEEEECCccCCCCCCcccCCHHHHHHHHH--H----------------HhHHHHHHHHHHHHHHHccCCCcEEE
Q 023708           85 SWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLS--V----------------NLNGILHGIKHAAKAMIEGQRKGSII  146 (278)
Q Consensus        85 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~--~----------------N~~~~~~l~~~~~~~~~~~~~~~~iv  146 (278)
                         ..-|++|+.+|....         +.|.+...  .                .......+++.+.+.+.+-..++-++
T Consensus        76 ---~gaDvVv~ta~~~~~---------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i  143 (169)
T d1s6ya1          76 ---DGADFVTTQFRVGGL---------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLI  143 (169)
T ss_dssp             ---TTCSEEEECCCTTHH---------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             ---CCCCEEEEccccCCC---------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEE
Confidence               268999999986422         11211111  1                12334456777888887755467777


Q ss_pred             EecCc
Q 023708          147 CTSSS  151 (278)
Q Consensus       147 ~vsS~  151 (278)
                      ++|-.
T Consensus       144 ~vtNP  148 (169)
T d1s6ya1         144 NFTNP  148 (169)
T ss_dssp             ECSSS
T ss_pred             EeCCh
Confidence            76543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.38  E-value=1.2  Score=33.73  Aligned_cols=73  Identities=21%  Similarity=0.192  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh---hC---CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST---IG---GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~---~~---~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .+.+||..|+.+|--.++..+|.  |..|+.+++.++..+...+.   .+   +.++..|..+.          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            46789999999888888877776  46699999887665544432   22   56777887531          123368


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.81  E-value=0.39  Score=37.56  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=30.1

Q ss_pred             CCcEEEEeCCCChhHHHH-----HHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAAT-----AKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~i-----a~~L~~~g~~Vi~~~r~~   51 (278)
                      .++.++|+.|-||.|+.+     |..|+++|.+|++++-+.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp   58 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP   58 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            567788888899999976     789999999999987653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.62  E-value=0.77  Score=31.75  Aligned_cols=35  Identities=20%  Similarity=0.261  Sum_probs=29.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .+|.++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            357788886 57999999999999999999988754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.46  E-value=0.57  Score=35.86  Aligned_cols=34  Identities=15%  Similarity=0.254  Sum_probs=28.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .++|+|.|| |--|..+|..|+++|++|++.+|..
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            466888886 5668888889999999999998754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.40  E-value=1.2  Score=35.48  Aligned_cols=71  Identities=18%  Similarity=0.159  Sum_probs=47.3

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCC-eEEEEecchHHHHH--HHhhh----CCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGA-HIVIADILDELGAA--LASTI----GGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~--~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .+++|+||-.|+++|+   ++..+++.|+ +|++++.++.....  .....    ++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            4579999999998876   5667788897 68888877644321  11111    25677788776421          1


Q ss_pred             cCCccEEEECC
Q 023708           87 KGQLDIMFNNA   97 (278)
Q Consensus        87 ~g~id~li~na   97 (278)
                      ..++|++|...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            23799998764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.26  E-value=3.7  Score=28.63  Aligned_cols=72  Identities=14%  Similarity=0.210  Sum_probs=45.8

Q ss_pred             CCCCcEEEEeCCCC-hhHHHHHHHHHHcCC-eEEEEecchHHHHHHHhhh---C----CeEEEecCCCHHHHHHHHHHHH
Q 023708           14 RLTGKVAVITGGAR-GIGAATAKLFAENGA-HIVIADILDELGAALASTI---G----GRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        14 ~l~~k~vlVtGas~-giG~~ia~~L~~~g~-~Vi~~~r~~~~~~~~~~~~---~----~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .++|+.+|=.|+.+ .+|.    +.+.+|+ +|+.++.+.+..+.+.+..   +    +.+++.|..+      .+   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            56889998888654 4555    4567786 7889998877766544322   2    4566666421      22   2


Q ss_pred             hhcCCccEEEECCc
Q 023708           85 SWKGQLDIMFNNAG   98 (278)
Q Consensus        85 ~~~g~id~li~nag   98 (278)
                      ...++.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            23357999987753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=84.12  E-value=1.5  Score=33.31  Aligned_cols=71  Identities=20%  Similarity=0.106  Sum_probs=48.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh----CCeEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI----GGRYIHCDVTKEEDVESAVRLAVSWKGQLD   91 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   91 (278)
                      .+.+||-.|+++|--.+   .|++.+.+|+.++..++..+...+..    ++.++..|....          ....++.|
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc----------chhhhhHH
Confidence            47789999998875443   45666789999998887766554432    256666776431          11236799


Q ss_pred             EEEECCcc
Q 023708           92 IMFNNAGI   99 (278)
Q Consensus        92 ~li~nag~   99 (278)
                      .++.+++.
T Consensus       137 ~Iiv~~a~  144 (224)
T d1vbfa_         137 RVVVWATA  144 (224)
T ss_dssp             EEEESSBB
T ss_pred             HHHhhcch
Confidence            99988875

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.09  E-value=0.45  Score=35.96  Aligned_cols=34  Identities=21%  Similarity=0.441  Sum_probs=28.9

Q ss_pred             CCcEEEEeCCCChhHH-----HHHHHHHHcCCeEEEEec
Q 023708           16 TGKVAVITGGARGIGA-----ATAKLFAENGAHIVIADI   49 (278)
Q Consensus        16 ~~k~vlVtGas~giG~-----~ia~~L~~~g~~Vi~~~r   49 (278)
                      .+|++.|+|+-||.|+     ++|..|+++|.+|++++-
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~   39 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG   39 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence            3789999999999987     467788899999999874

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.86  E-value=0.74  Score=31.52  Aligned_cols=34  Identities=21%  Similarity=0.449  Sum_probs=29.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      .+.++|.|| |.||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            467888875 7999999999999999999987643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.66  E-value=1.7  Score=32.50  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh---C---CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI---G---GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~---~---~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      .|.+||-.|+.+|--.++..++...+..|+.++.+++..+...+.+   +   +.++..|..+.          ....++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            4779999998877666655555656678999998877766554432   2   34455554421          112357


Q ss_pred             ccEEEECCccC
Q 023708           90 LDIMFNNAGIS  100 (278)
Q Consensus        90 id~li~nag~~  100 (278)
                      .|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999888753

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.40  E-value=1.5  Score=29.33  Aligned_cols=34  Identities=15%  Similarity=0.202  Sum_probs=26.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc---CCeEEEEecch
Q 023708           17 GKVAVITGGARGIGAATAKLFAEN---GAHIVIADILD   51 (278)
Q Consensus        17 ~k~vlVtGas~giG~~ia~~L~~~---g~~Vi~~~r~~   51 (278)
                      .+.++|.|| |.+|.++|..|.+.   |.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            477888888 89999999766554   56799887754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.98  E-value=0.46  Score=36.74  Aligned_cols=31  Identities=23%  Similarity=0.307  Sum_probs=26.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCeEEEEecc
Q 023708           19 VAVITGGARGIGAATAKLFAENGAHIVIADIL   50 (278)
Q Consensus        19 ~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~   50 (278)
                      .|+|.|| |--|..+|.+|+++|++|++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            3788887 778999999999999999998764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.93  E-value=1.5  Score=33.26  Aligned_cols=75  Identities=16%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhh-----------CCeEEEecCCCHHHHHHHHHHHH
Q 023708           16 TGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTI-----------GGRYIHCDVTKEEDVESAVRLAV   84 (278)
Q Consensus        16 ~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~   84 (278)
                      .|..||-.|+.+|--.++..++.....+|+.+++.++..+...+.+           .+.+...|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            4679999999999888888888888889999999887766543322           134555665421          1


Q ss_pred             hhcCCccEEEECCccC
Q 023708           85 SWKGQLDIMFNNAGIS  100 (278)
Q Consensus        85 ~~~g~id~li~nag~~  100 (278)
                      ...++.|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1235799999988753

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.93  E-value=2.2  Score=31.64  Aligned_cols=71  Identities=20%  Similarity=0.143  Sum_probs=42.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCeEEEEe-cchH--------HHHHHHhhhCCeEEE-ecCCCHHHHHHHHHHHHhhcCC
Q 023708           20 AVITGGARGIGAATAKLFAENGAHIVIAD-ILDE--------LGAALASTIGGRYIH-CDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~~Vi~~~-r~~~--------~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      +++. |++..|..+.+.|.+.|++|+.+- +.+.        ...+...+.++.++. -++.+++.++. +   .+.  .
T Consensus         3 iv~~-~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~-i---~~~--~   75 (203)
T d2blna2           3 TVVF-AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVER-I---AQL--S   75 (203)
T ss_dssp             EEEE-ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHH-H---HHT--C
T ss_pred             EEEE-ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhh-h---hhh--c
Confidence            4455 567799999999999999987543 2221        123444444555544 45655553332 2   222  7


Q ss_pred             ccEEEECC
Q 023708           90 LDIMFNNA   97 (278)
Q Consensus        90 id~li~na   97 (278)
                      +|++|...
T Consensus        76 ~Dlii~~g   83 (203)
T d2blna2          76 PDVIFSFY   83 (203)
T ss_dssp             CSEEEEES
T ss_pred             ccceeeee
Confidence            89887654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.56  E-value=0.44  Score=31.67  Aligned_cols=40  Identities=15%  Similarity=0.336  Sum_probs=31.6

Q ss_pred             ccCCCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           11 SSKRLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        11 ~~~~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      ...++.||.|+|.|++ --|..+|..|++.+.+|+...|..
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            3456899999999976 567789999999888877766643

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=82.46  E-value=3.1  Score=32.40  Aligned_cols=72  Identities=13%  Similarity=0.069  Sum_probs=44.6

Q ss_pred             cEEEEeCCCC-hhHHHHHHHHHHcCCeEEEEecchHHHHHHHh---hhC----CeEEEecCCCHHHHHHHHHHHHhhcCC
Q 023708           18 KVAVITGGAR-GIGAATAKLFAENGAHIVIADILDELGAALAS---TIG----GRYIHCDVTKEEDVESAVRLAVSWKGQ   89 (278)
Q Consensus        18 k~vlVtGas~-giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~---~~~----~~~~~~D~~~~~~i~~~~~~~~~~~g~   89 (278)
                      ++++-.|+++ -|+.+++ +  ...++|++++.+++.+.-..+   ..+    +.++..|+.+.         ..+.+++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            4556555544 4555544 2  357899999998877665433   222    33456676532         2234578


Q ss_pred             ccEEEECCccCC
Q 023708           90 LDIMFNNAGISG  101 (278)
Q Consensus        90 id~li~nag~~~  101 (278)
                      +|++|.|..+..
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999998763

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.30  E-value=2.6  Score=28.55  Aligned_cols=75  Identities=16%  Similarity=0.147  Sum_probs=48.2

Q ss_pred             CcEEEEeCCCC----------hhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCCCHHHHHHHHHHHHhh
Q 023708           17 GKVAVITGGAR----------GIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSW   86 (278)
Q Consensus        17 ~k~vlVtGas~----------giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   86 (278)
                      .|.+||.|+..          --+.+.+++|.+.|++++++..+.+....-...  ..-+..+--..+.+.++++.-   
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~--aD~lYfeplt~e~v~~Ii~~E---   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT--SDRLYFEPVTLEDVLEIVRIE---   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS--SSEEECCCCSHHHHHHHHHHH---
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh--cCceEEccCCHHHHHHHHHHh---
Confidence            57899999853          345678899999999999987776543211111  122334444566677766532   


Q ss_pred             cCCccEEEECCc
Q 023708           87 KGQLDIMFNNAG   98 (278)
Q Consensus        87 ~g~id~li~nag   98 (278)
                        ++|.++.-.|
T Consensus        79 --~p~~ii~~~G   88 (121)
T d1a9xa4          79 --KPKGVIVQYG   88 (121)
T ss_dssp             --CCSEEECSSS
T ss_pred             --CCCEEEeehh
Confidence              6888876665

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.86  E-value=1.1  Score=31.42  Aligned_cols=81  Identities=12%  Similarity=0.017  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCC---ChhHHHHHHHHHHcCCeEEEEecchHHHHHH-----HhhhC--CeEEEecCCCHHHHHHHHHHHHh
Q 023708           16 TGKVAVITGGA---RGIGAATAKLFAENGAHIVIADILDELGAAL-----ASTIG--GRYIHCDVTKEEDVESAVRLAVS   85 (278)
Q Consensus        16 ~~k~vlVtGas---~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~-----~~~~~--~~~~~~D~~~~~~i~~~~~~~~~   85 (278)
                      +.|++.|.|+|   +..|..+++.|.+.|++|+.+..........     .+++.  +..+.. +...+.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            57899999998   5799999999999999999875432111000     00011  111111 1246667777777666


Q ss_pred             hcCCccEEEECCcc
Q 023708           86 WKGQLDIMFNNAGI   99 (278)
Q Consensus        86 ~~g~id~li~nag~   99 (278)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            5  46666666654

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=81.61  E-value=4.7  Score=26.91  Aligned_cols=80  Identities=11%  Similarity=0.078  Sum_probs=54.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhcCCccE
Q 023708           15 LTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWKGQLDI   92 (278)
Q Consensus        15 l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~g~id~   92 (278)
                      |++.++||.--...+...+.+.|.+.|++|..+...+ ..-+...+.....+-+|+.  +.+. -++++++++....+-+
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~-~al~~~~~~~~dlvi~D~~mp~~~G-~e~~~~lr~~~~~~~i   78 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAE-AFLAFAPDVRNGVLVTDLRMPDMSG-VELLRNLGDLKINIPS   78 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHH-HHHHHGGGCCSEEEEEECCSTTSCH-HHHHHHHHHTTCCCCE
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHhhcCCcEEEEeccCccccc-hHHHHHHHhcCCCCeE
Confidence            3556899999999999999999999999988665444 3344444445566667775  4443 3567777766555666


Q ss_pred             EEEC
Q 023708           93 MFNN   96 (278)
Q Consensus        93 li~n   96 (278)
                      ++..
T Consensus        79 I~lt   82 (123)
T d1dbwa_          79 IVIT   82 (123)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=81.26  E-value=2.8  Score=32.36  Aligned_cols=69  Identities=17%  Similarity=0.216  Sum_probs=46.8

Q ss_pred             CCCCcEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhh-----hCCeEEEecCCCHHHHHHHHHHHHhhcC
Q 023708           14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALAST-----IGGRYIHCDVTKEEDVESAVRLAVSWKG   88 (278)
Q Consensus        14 ~l~~k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~g   88 (278)
                      ...|+++|=.|+.+|+   ++..+++.|++|+.++.++...+...+.     +...++..|+.      ..+     ..+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~------~~~-----~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLE------AAL-----PFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHH------HHG-----GGC
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccc------ccc-----ccc
Confidence            3568899999998886   3345778899999999988776655432     23456665532      111     235


Q ss_pred             CccEEEEC
Q 023708           89 QLDIMFNN   96 (278)
Q Consensus        89 ~id~li~n   96 (278)
                      +.|+++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            79999877

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.00  E-value=0.7  Score=31.36  Aligned_cols=33  Identities=30%  Similarity=0.284  Sum_probs=28.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecch
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILD   51 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~   51 (278)
                      |.++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            5677766 47999999999999999999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=80.94  E-value=0.66  Score=33.46  Aligned_cols=80  Identities=13%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCeEEE-EecchHHH-----HHHH--------------hhhCCeEEEecCCCHHHH
Q 023708           18 KVAVITGGARGIGAATAKLFAEN-GAHIVI-ADILDELG-----AALA--------------STIGGRYIHCDVTKEEDV   76 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~-g~~Vi~-~~r~~~~~-----~~~~--------------~~~~~~~~~~D~~~~~~i   76 (278)
                      -.+.|.|++|-+|+++++.+.+. ++.++. ++|.....     .++.              ......-+-.|++.++..
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~~   84 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGT   84 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHHH
Confidence            35899999999999999998875 566653 33321100     0000              000011155899999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCcc
Q 023708           77 ESAVRLAVSWKGQLDIMFNNAGI   99 (278)
Q Consensus        77 ~~~~~~~~~~~g~id~li~nag~   99 (278)
                      .+.++...+.  ++-+|+-..|.
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999877665  68888855553

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.56  E-value=0.84  Score=35.87  Aligned_cols=30  Identities=27%  Similarity=0.304  Sum_probs=25.6

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-eEEEEecc
Q 023708           20 AVITGGARGIGAATAKLFAENGA-HIVIADIL   50 (278)
Q Consensus        20 vlVtGas~giG~~ia~~L~~~g~-~Vi~~~r~   50 (278)
                      |+|.|| |-+|.++|.+|+++|. +|+++++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            777776 5899999999999997 69998875

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=80.35  E-value=3.7  Score=27.33  Aligned_cols=79  Identities=5%  Similarity=-0.048  Sum_probs=55.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCeEEEEecchHHHHHHHhhhCCeEEEecCC--CHHHHHHHHHHHHhhcCCccEEEE
Q 023708           18 KVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVT--KEEDVESAVRLAVSWKGQLDIMFN   95 (278)
Q Consensus        18 k~vlVtGas~giG~~ia~~L~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~g~id~li~   95 (278)
                      .++||.--..-+...+...|.+.|+.|..+....+....+.+......+-+|+.  +.+ --++++++++.+..+-+++.
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dliilD~~lp~~~-G~el~~~ir~~~~~~pii~l   81 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLS-IFSLLDIVKEQTKQPSVLIL   81 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSC-HHHHHHHHTTSSSCCEEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcCCCCEEEEeCCCCCCC-HHHHHHHHHhcCCCCcEEEE
Confidence            468888999999999999999999999987766655555544334556666665  333 44667788776555666665


Q ss_pred             CC
Q 023708           96 NA   97 (278)
Q Consensus        96 na   97 (278)
                      .+
T Consensus        82 t~   83 (118)
T d2b4aa1          82 TT   83 (118)
T ss_dssp             ES
T ss_pred             EC
Confidence            44