Citrus Sinensis ID: 023733

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS
Secondary Structure (PSIPRED)
cccEEEccccEEEHHHHHHHHEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEcccccEEEEccccEEccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccEEEEccccccccccccccccHHHHHHHHHccccccEEccccccccccccEEccccccc
Coil and Loop (DISEMBL)
mkcqrflsVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSvavaadpghvpsayvpdveddsggassDQELKKAAERRqcdkcsaykpprahhckvcrrcvlrmdhhclwinncvghwnYKAFFLLVFYATSGSIYSMVMIITSAFHknwdldgrvplKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKsglsyrhpfdvgvYKNISLVLgsnmltwlcptaishlkdgtsfptvrhts
Flexible Loop (DISEMBL)
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDkcsaykpprahhcKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAIshlkdgtsfptvrhts
Low Complexity Region (SEG)
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMlalclilgtllGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS
Disordered region (IsUnstruct)
***QRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHV**********************************AYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLK************
Disordered Region (DISOPRED)
*KCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPS************************RRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTV****
Disordered Region (DISEMBL)
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDV*********************CDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGT*********
Disordered Region (DISPRO)
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFP******
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	278	2.2.26 [Sep-21-2011]
Q500Z2	254	Probable S-acyltransferas	yes	no	0.913	1.0	0.619	2e-86
Q93VV0	286	Probable S-acyltransferas	no	no	0.946	0.919	0.507	1e-74
P0CS69	459	Palmitoyltransferase PFA4	N/A	no	0.953	0.577	0.310	9e-33
Q4PE27	604	Palmitoyltransferase PFA4	N/A	no	0.791	0.364	0.350	3e-31
P0CS68	456	Palmitoyltransferase PFA4	no	no	0.942	0.574	0.299	8e-29
Q94C49	302	Probable S-acyltransferas	no	no	0.820	0.754	0.335	8e-28
Q9UIJ5	367	Palmitoyltransferase ZDHH	yes	no	0.920	0.697	0.304	2e-27
Q8VYP5	307	Probable S-acyltransferas	no	no	0.863	0.781	0.334	5e-26
P59267	366	Palmitoyltransferase ZDHH	yes	no	0.906	0.688	0.295	5e-26
Q9JKR5	366	Palmitoyltransferase ZDHH	yes	no	0.906	0.688	0.295	9e-26

>sp|Q500Z2|ZDH20_ARATH Probable S-acyltransferase At5g04270 OS=Arabidopsis thaliana GN=At5g04270 PE=2 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 161/260 (61%), Positives = 196/260 (75%), Gaps = 6/260 (2%)

Query: 18  LGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPD 77
           +GFVYY+T+F+FI DW GLQ+SAG LNAL+F+LL  LC+FS S+ V  DPG VP++Y PD
Sbjct: 1   MGFVYYVTLFVFIDDWVGLQSSAGKLNALLFSLLASLCLFSLSICVLVDPGRVPASYAPD 60

Query: 78  VEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGH 137
           VED SG ++S+       E R+CDKC AYKP R HHC+VCRRCVL+MDHHCLWINNCVG+
Sbjct: 61  VED-SGWSNSN-----VTETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGY 114

Query: 138 WNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILG 197
            NYKAFF+LVFYAT  SIYS V+++  AF       G VPLKTF V CG  M+ L + LG
Sbjct: 115 ANYKAFFILVFYATVASIYSTVLLVCCAFKNGDSYAGNVPLKTFIVSCGIFMIGLSITLG 174

Query: 198 TLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWL 257
           TLL WHIYLI HNMTTIE+++  RA+WLA+KSG SYRH FDVG YKN++ VLG NM+ WL
Sbjct: 175 TLLCWHIYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKWL 234

Query: 258 CPTAISHLKDGTSFPTVRHT 277
           CPT   + +DG SF   R +
Sbjct: 235 CPTFTRNPEDGISFSASRDS 254

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q93VV0|ZDHC6_ARATH Probable S-acyltransferase At3g09320 OS=Arabidopsis thaliana GN=At3g09320 PE=2 SV=1

 Score =  279 bits (714), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/270 (50%), Positives = 189/270 (70%), Gaps = 7/270 (2%)

Query: 7   LSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAAD 66
            S+P+  V L++GF+Y+ ++F FI  W  L +S G+ NA  FT L  +C++++S+AV  D
Sbjct: 8   FSLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIAVFRD 67

Query: 67  PGHVPSAYVPDVEDDSGGASSDQELK-KAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMD 125
           PG VP  Y+PDVED     S   E+K K  + R C KCS +KPPRAHHC+VC+RCVLRMD
Sbjct: 68  PGRVPLNYMPDVEDPE---SPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRMD 124

Query: 126 HHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVP--LKTFYV 183
           HHC+WINNCVGH NYK FF+ V YA +  +YS+V+++ S   +  D +  +   L+T YV
Sbjct: 125 HHCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIYV 184

Query: 184 FCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYK 243
               +++ L + LG LLGWHIYLI+ N TTIEYHEG+RA WLA+K G  Y+HP+D+G Y+
Sbjct: 185 ISAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAYE 244

Query: 244 NISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
           N++L+LG N+L+WLCPT+  H+  G  F T
Sbjct: 245 NLTLILGPNILSWLCPTS-RHIGSGVRFRT 273

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P0CS69|PFA4_CRYNB Palmitoyltransferase PFA4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PFA4 PE=3 SV=1

 Score =  140 bits (353), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 139/277 (50%), Gaps = 12/277 (4%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVF-SF 59
           M  + +  V +    +L+ F+ + +    I  W G + S  LL  L+   L    +F ++
Sbjct: 1   MAARNWSRVWVGGTVILISFIAFSSQIFVIWPWYGREISLDLLKLLVPLNLAAFMIFWNY 60

Query: 60  SVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAER-RQCDKCSAYKPPRAHHCKVCR 118
            + V   PG VP  + P++     GA    E+KK     R C  C  YKPPRAHHC+ C+
Sbjct: 61  RLCVITSPGSVPEGWRPNI-----GAMDGMEVKKGTHTPRYCKNCEHYKPPRAHHCRQCK 115

Query: 119 RCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFH--KNWDLDGRV 176
            C L++DHHC WI NCVG +N   F   + +   G+ + +++++    +  + +  +  +
Sbjct: 116 TCWLKLDHHCPWIGNCVGFYNQGHFIRFLLWVDIGTTFHLIIMVRRVLYIAEYYHQEPTL 175

Query: 177 PLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGL-SYRH 235
               F VF     + + L +G    +H+YL   N TTIE  E  + A L ++  +   ++
Sbjct: 176 ADVLFLVFNFATCVPVWLCVGMFSIYHVYLACGNSTTIEGWEKDKVATLIRRGKIKEVKY 235

Query: 236 PFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFP 272
           P+++G+YKNI  VLG N   WL P  +    DG SFP
Sbjct: 236 PYNIGIYKNIKSVLGPNPFLWLWPQKMQ--GDGLSFP 270

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q4PE27|PFA4_USTMA Palmitoyltransferase PFA4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PFA4 PE=3 SV=1

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 133/251 (52%), Gaps = 31/251 (12%)

Query: 48  FTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQ--------------ELKK 93
           F L L    +++ + V  D G VP+ + P+       AS  +              ELK+
Sbjct: 116 FNLGLLAIYYNYWLCVTTDAGSVPAGWQPEWSALEPVASLAELEHLHLVAEEEPSLELKQ 175

Query: 94  AAER-RQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATS 152
           A  R R C  CSA+KPPR+HHCK C+RCVLRMDHHC W+ NCVGH+N+  F   +FY   
Sbjct: 176 AIYRPRYCKTCSAFKPPRSHHCKTCQRCVLRMDHHCPWLANCVGHFNHAHFIRFLFYVDV 235

Query: 153 GSIYSMVMI---ITSAFHK--NWDLDGRVPLKTFYVFCGTVMLALCLILGTLLG----WH 203
             +Y ++MI   +  +F+    W    R P     V+   V  ALC+ +  L+G    +H
Sbjct: 236 TCLYHLIMISCRVLDSFNSYTYW----REPCARELVWL-VVNYALCIPVILLVGIFSLYH 290

Query: 204 IYLIIHNMTTIEYHEGIRAAWLAKKSGL-SYRHPFDVGVYKNISLVLGSNMLTWLCPTAI 262
            Y +  N TTIE  E  R A + ++  +   ++P+D+G+++N+  VLG++ L W  P A 
Sbjct: 291 FYCLAVNQTTIESWEKDRTATMIRRGRVRKVKYPYDLGLWRNVRQVLGASPLVWCLPGAG 350

Query: 263 SHLK-DGTSFP 272
           + +  DG  +P
Sbjct: 351 ARMAGDGLKYP 361

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P0CS68|PFA4_CRYNJ Palmitoyltransferase PFA4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PFA4 PE=3 SV=1

 Score =  127 bits (320), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVF-SF 59
           M  + +  V +    +L+ F+ + +    I  W G + S  LL  L+   L    +F ++
Sbjct: 1   MAARNWSRVWVGGTVILISFIAFSSQIFVIWPWYGREISLDLLKLLVPLNLAAFMIFWNY 60

Query: 60  SVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAER-RQCDKCSAYKPPRAHHCKVCR 118
            + V   PG VP  + P++     GA    E+KK     R C  C  YKPPRAHHC+ C+
Sbjct: 61  RLCVITSPGSVPEGWRPNI-----GAMDGMEVKKGTHTPRYCKNCEHYKPPRAHHCRQCK 115

Query: 119 RCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFH--KNWDLDGRV 176
            C +   +HC WI NCVG +N   F   + +   G+ + +++++    +  + +  +  +
Sbjct: 116 TCWV---NHCPWIGNCVGFYNQGHFIRFLLWVDIGTTFHLIIMVRRVLYIAEYYHQEPTL 172

Query: 177 PLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGL-SYRH 235
               F VF     + + L +G    +H+YL   N TTIE  E  + A L ++  +   ++
Sbjct: 173 ADVLFLVFNFATCVPVWLCVGMFSIYHVYLACGNSTTIEGWEKDKVATLIRRGKIKEVKY 232

Query: 236 PFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFP 272
           P+++G+YKNI  VLG N   WL P  +    DG SFP
Sbjct: 233 PYNIGIYKNIKSVLGPNPFLWLWPQKMQ--GDGLSFP 267

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q94C49|ZDH18_ARATH Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1

 Score =  124 bits (311), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 28/256 (10%)

Query: 19  GFVYYITIFIFIKDWAGLQTSAGLLNALI---FTLLLCLCVFSFSVAVAADPGHVPSAYV 75
           GF YY  + +       +     LL+ L+   F  LL + ++S+   V  DPG VP+ + 
Sbjct: 28  GFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFFHFLLIMLLWSYFSVVVTDPGGVPTGWR 87

Query: 76  P--DVEDDSGGASSDQELKKAAER----RQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCL 129
           P  D+E   G  +   E           R C KC+ YKPPR+HHC VC RC+L+MDHHC+
Sbjct: 88  PELDIEKSEGNQALIGEASVGDSSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCV 147

Query: 130 WINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLK------TFYV 183
           W+ NCVG  NYK+F L +FY    +    V ++        D DG + +       +F  
Sbjct: 148 WVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSDGDGDITVSPGSLAASFVA 207

Query: 184 FCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYK 243
           F   +  AL  +LG L+  HI L+  N TTIE +E     W           P++VG   
Sbjct: 208 FVLNIAFALS-VLGFLI-MHIMLVARNTTTIEAYEKHTVNW-----------PYNVGRKT 254

Query: 244 NISLVLGSNMLTWLCP 259
           N   V GS+ + W  P
Sbjct: 255 NFEQVFGSDKMYWFVP 270

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UIJ5|ZDHC2_HUMAN Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=2 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 140/299 (46%), Gaps = 43/299 (14%)

Query: 2   KCQRFLS-VPIIAVFLLLGFVYY---ITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVF 57
           +C+R L  +P++ + LLLG+ YY   I + I   +  G Q    ++  + + LL  + V+
Sbjct: 13  RCRRVLYWIPVVFITLLLGWSYYAYAIQLCIVSMENTGEQ----VVCLMAYHLLFAMFVW 68

Query: 58  SFSVAVAADPG------HVPSAYVPDVEDDSGGASSDQELKKAAER------------RQ 99
           S+   +   P       H+  A    +E +  G +  + L++AA+             R 
Sbjct: 69  SYWKTIFTLPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRY 128

Query: 100 CDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMV 159
           CD+C   KP R HHC VC +C+L+MDHHC W+NNCVG  NYK F L + Y+    +Y + 
Sbjct: 129 CDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSL---LYCLF 185

Query: 160 MIITS-----AFHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTI 214
           +  T       F  N   D +      ++F    M ++   L +L G+H +L+  N +T+
Sbjct: 186 IAATDLQYFIKFWTNGLPDTQAKFHIMFLFFAAAMFSVS--LSSLFGYHCWLVSKNKSTL 243

Query: 215 EYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
           E            K+G      F +G  KN+  V G     WL P   S L DG SFPT
Sbjct: 244 EAFRSPVFRHGTDKNG------FSLGFSKNMRQVFGDEKKYWLLPI-FSSLGDGCSFPT 295

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP5|ZDH14_ARATH Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 129/269 (47%), Gaps = 29/269 (10%)

Query: 8   SVPIIAVFLLLGFVYY---ITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVA 64
           S+ I+ V  ++G  YY   +T +       GL + A L   ++F  LL + ++S+   V 
Sbjct: 24  SIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAALTILILFHFLLAMLLWSYFSVVF 83

Query: 65  ADPGHVPSAYVPDVEDDSG-----------GASSDQELKKAAERRQCDKCSAYKPPRAHH 113
            DPG VP  + P  +++ G           G  SD         R C KC+  KP R HH
Sbjct: 84  TDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS-SSNPRVRFCRKCNQLKPSRCHH 142

Query: 114 CKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITS--AFHKNWD 171
           C VC RCVL+MDHHC+W+ NCVG  NYK F L +FY    +    ++++    AF  + +
Sbjct: 143 CSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTLVLMPHFIAFFSDEE 202

Query: 172 LDGRVPLKTFYVFCGTVM-LALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSG 230
           + G  P      F   V+ LA  L +   L  HI L+  N TTIE +E        KK+ 
Sbjct: 203 IPG-TPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAGNTTTIEAYE--------KKTT 253

Query: 231 LSYRHPFDVGVYKNISLVLGSNMLTWLCP 259
             +R  +D+G  KN   V G +   WL P
Sbjct: 254 TKWR--YDLGKKKNFEQVFGMDKRYWLIP 280

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P59267|ZDHC2_MOUSE Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdhhc2 PE=2 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 36/288 (12%)

Query: 9   VPIIAVFLLLGFVYY---ITIFIFIKDWAGLQTSAGLLNALIFTLLLC---LCVFSFSVA 62
           +P++ + LLLG+ YY   I + I   +  G Q    +   L+F + +      +F+  + 
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIGEQVVCLMAYHLLFAMFVWSYWKTIFTLPMN 79

Query: 63  VAADPGHVPSAYVPDVEDDSGGASSDQELKKAAER------------RQCDKCSAYKPPR 110
            + +  H+  A    +E +  G +  + L++AA+             R CD+C   KP R
Sbjct: 80  PSKE-FHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDR 138

Query: 111 AHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITS-----A 165
            HHC VC +C+L+MDHHC W+NNCVG  NYK F L + Y+    +Y + +  T       
Sbjct: 139 CHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSL---LYCLFIAATDLQYFIR 195

Query: 166 FHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWL 225
           F  N   D +      ++F    M ++   L +L G+H +L+  N +T+E          
Sbjct: 196 FWTNGLPDTQAKFHIMFLFFAAAMFSVS--LSSLFGYHCWLVSKNKSTLEAFRNPVFRHG 253

Query: 226 AKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
             K+G      F +G  KN+  V G     WL P   S   DG SFPT
Sbjct: 254 TDKNG------FSLGFSKNMRQVFGDEKKYWLLPV-FSSQGDGCSFPT 294

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9JKR5|ZDHC2_RAT Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus GN=Zdhhc2 PE=2 SV=1

 Score =  117 bits (293), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 36/288 (12%)

Query: 9   VPIIAVFLLLGFVYY---ITIFIFIKDWAGLQTSAGLLNALIFTLLLC---LCVFSFSVA 62
           +P++ + LLLG+ YY   I + I   +  G Q    +   L+F + +      +F+  + 
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIGEQVVCLMAYHLLFAMFVWSYWKTIFTLPMN 79

Query: 63  VAADPGHVPSAYVPDVEDDSGGASSDQELKKAAER------------RQCDKCSAYKPPR 110
            + +  H+  A    +E +  G +  + L++AA+             R CD+C   KP R
Sbjct: 80  PSKE-FHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCRLIKPDR 138

Query: 111 AHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITS-----A 165
            HHC VC +C+L+MDHHC W+NNCVG  NYK F L + Y+    +Y + +  T       
Sbjct: 139 CHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSL---LYCLFIAATDLQYFIR 195

Query: 166 FHKNWDLDGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWL 225
           F  N   D +      ++F    M ++   L +L G+H +L+  N +T+E          
Sbjct: 196 FWTNGLPDTQAKFHIMFLFFAAAMFSVS--LSSLFGYHCWLVSKNKSTLEAFRNPVFRHG 253

Query: 226 AKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
             K+G      F +G  KN+  V G     WL P   S   DG SFPT
Sbjct: 254 TDKNG------FSLGFSKNMRQVFGDEKKYWLLPI-FSSQGDGCSFPT 294

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
225448986	276	PREDICTED: probable S-acyltransferase At	0.989	0.996	0.681	1e-110
449464364	276	PREDICTED: probable S-acyltransferase At	0.989	0.996	0.637	1e-107
449527519	276	PREDICTED: probable S-acyltransferase At	0.989	0.996	0.634	1e-107
356576244	268	PREDICTED: probable S-acyltransferase At	0.964	1.0	0.625	1e-102
356535613	273	PREDICTED: probable S-acyltransferase At	0.964	0.981	0.615	1e-100
224113083	268	predicted protein [Populus trichocarpa]	0.920	0.955	0.640	3e-98
357443165	275	Palmitoyltransferase ERF2 [Medicago trun	0.974	0.985	0.584	9e-94
147790250	243	hypothetical protein VITISV_027472 [Viti	0.870	0.995	0.602	3e-92
297810517	254	zinc ion binding protein [Arabidopsis ly	0.913	1.0	0.615	1e-89
145357624	254	putative S-acyltransferase [Arabidopsis	0.913	1.0	0.619	1e-84

>gi|225448986|ref|XP_002270805.1| PREDICTED: probable S-acyltransferase At5g04270 [Vitis vinifera] gi|296085987|emb|CBI31428.3| unnamed protein product [Vitis vinifera]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/279 (68%), Positives = 224/279 (80%), Gaps = 4/279 (1%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           MK +RFLS+PI +VFLLLGFVYY+T+F+FI+DW GLQTS G LNALIFT L  L +FS  
Sbjct: 1   MKDKRFLSIPIFSVFLLLGFVYYVTVFVFIEDWVGLQTSPGFLNALIFTFLAFLSLFSLF 60

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKK-AAERRQCDKCSAYKPPRAHHCKVCRR 119
           V V++DPG VP +YVPD E+ +    SDQE K+   + R CDKC  YKPPRAHHC+VCRR
Sbjct: 61  VCVSSDPGRVPPSYVPDDEESN---VSDQETKRNGGQLRHCDKCCIYKPPRAHHCRVCRR 117

Query: 120 CVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLK 179
           CVLRMDHHCLWINNCVG+WNYKAF +LV YAT GSI+S V+I+T A  ++WD  GRVP+K
Sbjct: 118 CVLRMDHHCLWINNCVGYWNYKAFVMLVLYATIGSIHSTVIIVTCALQRDWDFSGRVPVK 177

Query: 180 TFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDV 239
            FY   G +M+AL L LGT LGWHIYL+ HNMTTIEY+EGIRAAWLAKKSG SYRHPF+V
Sbjct: 178 IFYFTFGAMMVALSLTLGTFLGWHIYLLTHNMTTIEYYEGIRAAWLAKKSGQSYRHPFNV 237

Query: 240 GVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
           GVYKNI+LVLG NML WLCP+++ HLK+G SFP  R  S
Sbjct: 238 GVYKNITLVLGPNMLKWLCPSSVGHLKNGISFPVSRDNS 276

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464364|ref|XP_004149899.1| PREDICTED: probable S-acyltransferase At5g04270-like [Cucumis sativus]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/279 (63%), Positives = 223/279 (79%), Gaps = 4/279 (1%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           M  ++F+S+PI +V  L+GFVYYIT+FIFI+DW GL TS GL+N+ IFT L  LC+FSF+
Sbjct: 1   MNMKKFISIPIFSVLSLMGFVYYITVFIFIQDWTGLLTSPGLINSFIFTYLASLCLFSFA 60

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAA-ERRQCDKCSAYKPPRAHHCKVCRR 119
           V V  DPG VPS+Y+PD E+ +G   SD + K +A + +QC+KCS YKPPRAHHC+VCRR
Sbjct: 61  VCVLTDPGSVPSSYLPDFEESAG---SDHDAKNSALQMKQCEKCSTYKPPRAHHCRVCRR 117

Query: 120 CVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLK 179
           CVLRMDHHCLWINNCVG+WNYK+FF+LV Y T  S+YS  +I++ A  KNWD DG +PLK
Sbjct: 118 CVLRMDHHCLWINNCVGYWNYKSFFVLVSYGTLASLYSTFIIVSCAIRKNWDFDGTLPLK 177

Query: 180 TFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDV 239
            FY+ C  +M++L   LGTLLGWH+YLII NMTTIEY+EGIRAAWLA+KSG SY+HPFD+
Sbjct: 178 IFYIICAVMMISLSSTLGTLLGWHVYLIIRNMTTIEYYEGIRAAWLARKSGQSYQHPFDI 237

Query: 240 GVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
             YKN++LVLG N+L W  PT++ HLKDG SFPT+R TS
Sbjct: 238 SAYKNMTLVLGPNILKWAWPTSVGHLKDGLSFPTLRDTS 276

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527519|ref|XP_004170758.1| PREDICTED: probable S-acyltransferase At5g04270-like [Cucumis sativus]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/279 (63%), Positives = 223/279 (79%), Gaps = 4/279 (1%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           M  ++F+S+PI +V  L+GFVYYIT+FIFI+DW GL TS GL+N+ IFT L  LC+FSF+
Sbjct: 1   MNMKKFISIPIFSVLSLMGFVYYITVFIFIQDWTGLLTSPGLINSFIFTYLASLCLFSFA 60

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAA-ERRQCDKCSAYKPPRAHHCKVCRR 119
           V V  DPG VPS+Y+PD E+ +G   SD + K +A + +QC+KC+ YKPPRAHHC+VCRR
Sbjct: 61  VCVLTDPGSVPSSYLPDFEESAG---SDHDAKNSALQMKQCEKCNTYKPPRAHHCRVCRR 117

Query: 120 CVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLK 179
           CVLRMDHHCLWINNCVG+WNYK+FF+LV Y T  S+YS  +I++ A  KNWD DG +PLK
Sbjct: 118 CVLRMDHHCLWINNCVGYWNYKSFFVLVSYGTLASLYSTFIIVSCAIRKNWDFDGTLPLK 177

Query: 180 TFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDV 239
            FY+ C  +M++L   LGTLLGWH+YLII NMTTIEY+EGIRAAWLA+KSG SY+HPFD+
Sbjct: 178 IFYIICAVMMISLSSTLGTLLGWHVYLIIRNMTTIEYYEGIRAAWLARKSGQSYQHPFDI 237

Query: 240 GVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
             YKN++LVLG N+L W  PT++ HLKDG SFPT+R TS
Sbjct: 238 SAYKNMTLVLGPNILKWAWPTSVGHLKDGLSFPTLRDTS 276

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576244|ref|XP_003556243.1| PREDICTED: probable S-acyltransferase At5g04270-like [Glycine max]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/278 (62%), Positives = 214/278 (76%), Gaps = 10/278 (3%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           MK +RFLSVP++AVFLL+ FVYY +IF+F++DW GLQ+S G LNA +F+L   L +FSF 
Sbjct: 1   MKGKRFLSVPVLAVFLLMLFVYYSSIFVFLQDWLGLQSSPGTLNAFLFSLFASLSLFSFF 60

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRC 120
             V  DPGHVPS+Y PDVE            K  AE+++CDKC AYKPPR HHC+VCRRC
Sbjct: 61  SCVLTDPGHVPSSYAPDVEFS----------KDNAEQKKCDKCFAYKPPRTHHCRVCRRC 110

Query: 121 VLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKT 180
           +L+MDHHCLWINNCVG+WNYKAFF+ VFYAT+ SIYS ++ ++  F K+WD      LK 
Sbjct: 111 ILKMDHHCLWINNCVGYWNYKAFFVFVFYATTASIYSTIIFMSCVFQKDWDPIKGSSLKI 170

Query: 181 FYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVG 240
           FYV  GT+++ L + L TL GWH+YLI+HNMTTIEY+EG RA WLA +SG SYRHPF++G
Sbjct: 171 FYVLYGTMVVGLTITLLTLFGWHVYLILHNMTTIEYYEGNRAKWLAMRSGQSYRHPFNIG 230

Query: 241 VYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
            YKNI+LVLG NML WLCPTA+SHLKDG SFPT+R  S
Sbjct: 231 AYKNITLVLGPNMLKWLCPTAVSHLKDGVSFPTLRDNS 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535613|ref|XP_003536339.1| PREDICTED: probable S-acyltransferase At5g04270-like [Glycine max]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/278 (61%), Positives = 211/278 (75%), Gaps = 10/278 (3%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           MK +RF+SVP++AV LL+ FVYY ++F+F++DW GLQ+S G LNA +F+L   L +FSF 
Sbjct: 6   MKGKRFVSVPVLAVILLMVFVYYCSMFVFLQDWLGLQSSPGTLNAFLFSLFASLSLFSFF 65

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRC 120
             V  DPGHVPS+Y PDVE            K  AE+++CDKC AYKPPR HHC+VCRRC
Sbjct: 66  SCVLTDPGHVPSSYAPDVEFS----------KDNAEQKKCDKCFAYKPPRTHHCRVCRRC 115

Query: 121 VLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKT 180
           +L+MDHHCLWINNCVG+WNYK FF+ VFYAT  SIYS ++ ++  F K WD      LKT
Sbjct: 116 ILKMDHHCLWINNCVGYWNYKTFFVFVFYATMASIYSTIIFMSCVFQKYWDPIKGSSLKT 175

Query: 181 FYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVG 240
           F+V  GT+++ L + L TL GWH+YLI+HNMTTIEY+EG RA WLA KSG SYRHPF++G
Sbjct: 176 FFVLYGTMVVGLTITLLTLFGWHVYLILHNMTTIEYYEGKRAKWLAMKSGQSYRHPFNIG 235

Query: 241 VYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
            YKNI+LVLG NML WLCPTA+SHLKDG SFPT+R  S
Sbjct: 236 AYKNITLVLGPNMLKWLCPTAVSHLKDGVSFPTLRDNS 273

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113083|ref|XP_002316385.1| predicted protein [Populus trichocarpa] gi|222865425|gb|EEF02556.1| predicted protein [Populus trichocarpa]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/264 (64%), Positives = 204/264 (77%), Gaps = 8/264 (3%)

Query: 18  LGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPD 77
           +GFVYYIT+FIFI+DW GLQ+SAG LNA+IFT +  LC+FSF   V  +PG+VPS YVPD
Sbjct: 1   MGFVYYITVFIFIEDWVGLQSSAGTLNAMIFTFMASLCLFSFLFCVLKEPGYVPSPYVPD 60

Query: 78  VEDDSGGASSDQ--------ELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCL 129
           VE  +     +         +   +++ R+CDKC  YKPPRAHHC+VCRRCVLRMDHHCL
Sbjct: 61  VEGAAVPPHQEPLNNVMKLFDFCISSQLRRCDKCVTYKPPRAHHCRVCRRCVLRMDHHCL 120

Query: 130 WINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVM 189
           WINNCVG+WNYKAFF+LV YAT  SIYS VMII+ A  KNW+  GR+P+K F+V  G +M
Sbjct: 121 WINNCVGYWNYKAFFILVLYATIASIYSSVMIISCASQKNWNFSGRIPMKIFFVVSGAMM 180

Query: 190 LALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVL 249
             L +  GTLLGWHIYL+  NMTTIE +EGIRAAWLA+KSG SYRHPF++ VYKNI+ VL
Sbjct: 181 FGLSITFGTLLGWHIYLMSCNMTTIENYEGIRAAWLARKSGHSYRHPFNLSVYKNITSVL 240

Query: 250 GSNMLTWLCPTAISHLKDGTSFPT 273
           G N+L WLCPTA+SHLKDG S+PT
Sbjct: 241 GPNILKWLCPTAVSHLKDGMSYPT 264

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443165|ref|XP_003591860.1| Palmitoyltransferase ERF2 [Medicago truncatula] gi|355480908|gb|AES62111.1| Palmitoyltransferase ERF2 [Medicago truncatula] gi|388502002|gb|AFK39067.1| unknown [Medicago truncatula]

 Score =  349 bits (895), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 162/277 (58%), Positives = 203/277 (73%), Gaps = 6/277 (2%)

Query: 2   KCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSV 61
           + +RF+S+P++ V  L+ FVYY TIFI + DW GL+TS G LN+  FTL   L +FSF +
Sbjct: 5   RMKRFVSLPVLGVLSLMLFVYYTTIFILLDDWVGLRTSPGTLNSFFFTLFASLSLFSFFL 64

Query: 62  AVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCV 121
            V  DPGHVPS++ PD  + +  A      K  AE+++CDKC  YKPPR HHC+VCRRCV
Sbjct: 65  CVLTDPGHVPSSFYPDDVESTANA------KDNAEQKKCDKCFGYKPPRTHHCRVCRRCV 118

Query: 122 LRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTF 181
           L+MDHHCLWINNCVG+WNYKAFF  +FYAT  SIYSMV+ I+    K W  +    LK F
Sbjct: 119 LKMDHHCLWINNCVGYWNYKAFFDFIFYATLASIYSMVLFISYVLQKEWGHNKESSLKLF 178

Query: 182 YVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGV 241
           YV  GT+++ L + L TL GWH+YLI+HNMTTIEY+EG RA WLA K+G SYRHP+++G 
Sbjct: 179 YVMYGTIVVGLTITLLTLTGWHVYLILHNMTTIEYYEGNRAKWLATKTGQSYRHPYNIGA 238

Query: 242 YKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
           YKNI+L+LG  ML WLCPTA+ HLKDG SFPT+R  S
Sbjct: 239 YKNITLILGPTMLKWLCPTAVGHLKDGVSFPTLRDNS 275

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790250|emb|CAN72305.1| hypothetical protein VITISV_027472 [Vitis vinifera]

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 168/279 (60%), Positives = 199/279 (71%), Gaps = 37/279 (13%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           MK +RFLS+PI +VFLLLGFVYY+T+F+FI+DW GLQTS G LNALIFT L  L +FS  
Sbjct: 1   MKDKRFLSIPIFSVFLLLGFVYYVTVFVFIEDWVGLQTSPGFLNALIFTFLAFLSLFSLF 60

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQELKK-AAERRQCDKCSAYKPPRAHHCKVCRR 119
           V V++DPG VP +YVPD E+ +    SDQE K+   + R CDKC  YKPPRAHHC+VCRR
Sbjct: 61  VCVSSDPGRVPPSYVPDDEESN---VSDQETKRNGXQLRHCDKCCIYKPPRAHHCRVCRR 117

Query: 120 CVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLK 179
           CVLRMDHHCLWINNCVG+WNYKAF +LV YAT GSI+S V+I+T A  ++WD  GRVP+K
Sbjct: 118 CVLRMDHHCLWINNCVGYWNYKAFVMLVLYATIGSIHSTVIIVTCALQRDWDFSGRVPVK 177

Query: 180 TFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDV 239
            FY                                 Y+EGIRAAWLAKKSG SYRHPF+V
Sbjct: 178 IFY---------------------------------YYEGIRAAWLAKKSGQSYRHPFNV 204

Query: 240 GVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRHTS 278
           GVYKNI+LVLG NML WLCP+++ HLK+G SFP  R  S
Sbjct: 205 GVYKNITLVLGPNMLKWLCPSSVGHLKNGISFPVSRXNS 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810517|ref|XP_002873142.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297318979|gb|EFH49401.1| zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 160/260 (61%), Positives = 197/260 (75%), Gaps = 6/260 (2%)

Query: 18  LGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPD 77
           +GFVYY+T+FIFI DW GL++SAG LNAL+F+ L  LC+FS S+ V  DPG VP++YVPD
Sbjct: 1   MGFVYYVTLFIFIDDWVGLRSSAGKLNALLFSFLASLCLFSLSICVLVDPGRVPASYVPD 60

Query: 78  VEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGH 137
           VED SG ++ +     A E R+CDKC AYKP R HHC+VCRRCVL+MDHHCLWINNCVG+
Sbjct: 61  VED-SGWSNGN-----ATETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGY 114

Query: 138 WNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILG 197
            NYKAFF+LVFYAT  SIYS V+++  AF       G VPLKTF V CG  M+ L + LG
Sbjct: 115 ANYKAFFILVFYATVASIYSTVLLVCCAFKNGDSYAGNVPLKTFIVCCGIFMIGLSITLG 174

Query: 198 TLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWL 257
           TLL WHIYLI HN+TTIE+++  RA+WLA+KSG S+RH FD+GVYKNI+ VLG NM+ WL
Sbjct: 175 TLLCWHIYLIAHNITTIEHYDSKRASWLARKSGQSFRHQFDIGVYKNITSVLGPNMIKWL 234

Query: 258 CPTAISHLKDGTSFPTVRHT 277
           CPT   + +DG SF   R +
Sbjct: 235 CPTFTRNSEDGISFSASRDS 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145357624|ref|NP_196047.2| putative S-acyltransferase [Arabidopsis thaliana] gi|75276304|sp|Q500Z2.1|ZDH20_ARATH RecName: Full=Probable S-acyltransferase At5g04270; AltName: Full=Probable palmitoyltransferase At5g04270; AltName: Full=Zinc finger DHHC domain-containing protein At5g04270 gi|63025178|gb|AAY27062.1| At5g04270 [Arabidopsis thaliana] gi|332003339|gb|AED90722.1| putative S-acyltransferase [Arabidopsis thaliana]

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 161/260 (61%), Positives = 196/260 (75%), Gaps = 6/260 (2%)

Query: 18  LGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPD 77
           +GFVYY+T+F+FI DW GLQ+SAG LNAL+F+LL  LC+FS S+ V  DPG VP++Y PD
Sbjct: 1   MGFVYYVTLFVFIDDWVGLQSSAGKLNALLFSLLASLCLFSLSICVLVDPGRVPASYAPD 60

Query: 78  VEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGH 137
           VED SG ++S+       E R+CDKC AYKP R HHC+VCRRCVL+MDHHCLWINNCVG+
Sbjct: 61  VED-SGWSNSN-----VTETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGY 114

Query: 138 WNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLALCLILG 197
            NYKAFF+LVFYAT  SIYS V+++  AF       G VPLKTF V CG  M+ L + LG
Sbjct: 115 ANYKAFFILVFYATVASIYSTVLLVCCAFKNGDSYAGNVPLKTFIVSCGIFMIGLSITLG 174

Query: 198 TLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWL 257
           TLL WHIYLI HNMTTIE+++  RA+WLA+KSG SYRH FDVG YKN++ VLG NM+ WL
Sbjct: 175 TLLCWHIYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKWL 234

Query: 258 CPTAISHLKDGTSFPTVRHT 277
           CPT   + +DG SF   R +
Sbjct: 235 CPTFTRNPEDGISFSASRDS 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	278
TAIR|locus:2146713	254	AT5G04270 [Arabidopsis thalian	0.902	0.988	0.610	1e-84
TAIR|locus:2083504	286	AT3G09320 [Arabidopsis thalian	0.942	0.916	0.490	9.3e-75
ASPGD|ASPL0000047879	435	AN1565 [Emericella nidulans (t	0.514	0.328	0.364	5.3e-29
DICTYBASE|DDB_G0278239	420	DDB_G0278239 "Palmitoyltransfe	0.938	0.621	0.326	7.1e-29
TAIR|locus:2134643	291	AT4G00840 [Arabidopsis thalian	0.899	0.859	0.323	2.4e-28
DICTYBASE|DDB_G0279395	442	DDB_G0279395 "DHHC-type zinc f	0.251	0.158	0.457	3.4e-28
TAIR|locus:2101806	307	AT3G60800 "AT3G60800" [Arabido	0.863	0.781	0.323	5e-28
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.812	0.697	0.325	5e-28
FB|FBgn0033474	443	CG1407 [Drosophila melanogaste	0.600	0.376	0.360	1e-27
GENEDB_PFALCIPARUM|PF10_0273	270	PF10_0273 "DHHC-type zinc fing	0.820	0.844	0.316	2.2e-27

TAIR|locus:2146713 AT5G04270 [Arabidopsis thaliana (taxid:3702)]

 Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
 Identities = 158/259 (61%), Positives = 190/259 (73%)

Query:    18 LGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPD 77
             +GFVYY+T+F+FI DW GLQ+SAG LNAL+F+LL  LC+FS S+ V  DPG VP++Y PD
Sbjct:     1 MGFVYYVTLFVFIDDWVGLQSSAGKLNALLFSLLASLCLFSLSICVLVDPGRVPASYAPD 60

Query:    78 VEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGH 137
             VED SG ++S+       E R+CDKC AYKP R HHC+VCRRCVL+MDHHCLWINNCVG+
Sbjct:    61 VED-SGWSNSN-----VTETRKCDKCFAYKPLRTHHCRVCRRCVLKMDHHCLWINNCVGY 114

Query:   138 WNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWD-LDGRVPLKTFYVFCGTVMXXXXXXX 196
              NYKAFF+LVFYAT  SIYS V+++  AF KN D   G VPLKTF V CG  M       
Sbjct:   115 ANYKAFFILVFYATVASIYSTVLLVCCAF-KNGDSYAGNVPLKTFIVSCGIFMIGLSITL 173

Query:   197 XXXXGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTW 256
                  WHIYLI HNMTTIE+++  RA+WLA+KSG SYRH FDVG YKN++ VLG NM+ W
Sbjct:   174 GTLLCWHIYLITHNMTTIEHYDSKRASWLARKSGQSYRHQFDVGFYKNLTSVLGPNMIKW 233

Query:   257 LCPTAISHLKDGTSFPTVR 275
             LCPT   + +DG SF   R
Sbjct:   234 LCPTFTRNPEDGISFSASR 252

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2083504 AT3G09320 [Arabidopsis thaliana (taxid:3702)]

 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 132/269 (49%), Positives = 182/269 (67%)

Query:     8 SVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADP 67
             S+P+  V L++GF+Y+ ++F FI  W  L +S G+ NA  FT L  +C++++S+AV  DP
Sbjct:     9 SLPVTVVMLVIGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIAVFRDP 68

Query:    68 GHVPSAYVPDVEDDSGGASSDQELK-KAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDH 126
             G VP  Y+PDVED     S   E+K K  + R C KCS +KPPRAHHC+VC+RCVLRMDH
Sbjct:    69 GRVPLNYMPDVEDPE---SPVHEIKRKGGDLRYCQKCSHFKPPRAHHCRVCKRCVLRMDH 125

Query:   127 HCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVP--LKTFYVF 184
             HC+WINNCVGH NYK FF+ V YA +  +YS+V+++ S   +  D +  +   L+T YV 
Sbjct:   126 HCIWINNCVGHTNYKVFFVFVVYAVTACVYSLVLLVGSLTVEPQDEEEEMGSYLRTIYVI 185

Query:   185 CGTVMXXXXXXXXXXXGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKN 244
                ++           GWHIYLI+ N TTIEYHEG+RA WLA+K G  Y+HP+D+G Y+N
Sbjct:   186 SAFLLIPLSIALGVLLGWHIYLILQNKTTIEYHEGVRAMWLAEKGGQVYKHPYDIGAYEN 245

Query:   245 ISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
             ++L+LG N+L+WLCPT+  H+  G  F T
Sbjct:   246 LTLILGPNILSWLCPTS-RHIGSGVRFRT 273

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

ASPGD|ASPL0000047879 AN1565 [Emericella nidulans (taxid:162425)]

 Score = 278 (102.9 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
 Identities = 59/162 (36%), Positives = 85/162 (52%)

Query:     1 MKCQRF----LSVPIIAVFLLLGFVYYIT--IFIFIKDWAGLQTSAGLLNALIFTLLLCL 54
             M C  F    L++P  AV +L+ F+ Y +   F++ +D    +     +N L   + +C 
Sbjct:     1 MLCSSFSVSRLAIP--AVCILIAFLAYTSQIFFLYFEDAPLKEDEVWRINILAICIWIC- 57

Query:    55 CVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHC 114
                 +  A   DPGHVP  ++P    D     +D   + +  +R C +C AYKPPRAHHC
Sbjct:    58 ----YYRACTVDPGHVPKGWMPS---DRERLKAD---RASGRQRWCRRCEAYKPPRAHHC 107

Query:   115 KVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIY 156
             K C RCV +MDHHC W +NCV H+ +  F   +FYA  G  Y
Sbjct:   108 KTCERCVPKMDHHCPWTSNCVSHFTFPHFARFLFYAVVGIAY 149

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0278239 DDB_G0278239 "Palmitoyltransferase PFA3" [Dictyostelium discoideum (taxid:44689)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 93/285 (32%), Positives = 139/285 (48%)

Query:    10 PIIAVFLLLGFVYYITIFIFIKD-WAGLQTS--AGLLNALIFTLLLCLCVFSFSVAVAAD 66
             PII +  L  F Y   +F + K+ +     +    LL  + F L+  +    F  A   D
Sbjct:   131 PIIFLEGLFLFCYIPFVFYYTKNIYNNFDNNRIGNLLVLVFFHLIFIITQICFYRASFTD 190

Query:    67 PGHVPSAYVPD--VEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRM 124
             PG +P+ + PD  ++     + S  E   + + R+C KCS  KP R HHC  C+RC+L+M
Sbjct:   191 PGGIPNNF-PDFLLQSQDLESVSFYEFNSSGKNRKCSKCSLNKPDRCHHCSKCKRCILKM 249

Query:   125 DHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVF 184
             DHHC +INNCVG +NYK F L + ++T+  ++  V+  TSA  KN    G   +    V 
Sbjct:   250 DHHCPFINNCVGFYNYKFFVLFLMWSTTLCLF--VLCTTSANLKNLLQQGSDSVVLGIVS 307

Query:   185 CGTVMXXXXXXXXXXXGWHIYLIIHNMTTIEYHE------GIRAAW---LA---KKSGLS 232
                ++             HI  I++N TTIE+ E      G  ++    L    K +  S
Sbjct:   308 IIALVFGLGLFFFTMT--HIKYILYNETTIEHFEKNNKSSGNNSSNNRNLGRDDKGNDGS 365

Query:   233 YRHPFDVGVYKNISLVLGSNMLTWLCPTAISH-LKDGTSFPTVRH 276
               + F++G  KN   V G N LTW  P AI++ +  G  FP V+H
Sbjct:   366 RANIFNIGFKKNFCQVFGKNPLTWFLPIAINYTILSGLEFP-VQH 409

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2134643 AT4G00840 [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 91/281 (32%), Positives = 128/281 (45%)

Query:    11 IIAVFLLLGFVYYITIF-----IFIK-DWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVA 64
             I+ V  ++G  YY  +      I I+ D   L   A L+   +F  LL + ++S+   V 
Sbjct:    18 ILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALI-IFVFHFLLIMLLWSYFTTVF 76

Query:    65 ADPGHVPSAYVPDVED-DS--GGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCV 121
              DPG VP  +  ++   DS   G S+DQ          C KC   KPPR HHC VC+RCV
Sbjct:    77 TDPGSVPEHFRREMGGGDSLEAGTSTDQGA--FGSLGYCTKCRNVKPPRCHHCSVCQRCV 134

Query:   122 LRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITS--AFHKNWDLDGRVPLK 179
             L+MDHHC+WI NCVG  NYK F L +FY    ++  +++++ S   F          P K
Sbjct:   135 LKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIVLLPSFIEFFSQAIKHSSSPGK 194

Query:   180 TFYVFCGTVMXXXXXXXXX-XXGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFD 238
                +    V+              HI L+  N T++E HE         K+G   R  +D
Sbjct:   195 LASLVLAFVLNFAFVLSLLCFVVMHISLLSSNTTSVEVHE---------KNG-EVRWKYD 244

Query:   239 VGVYKNISLVLGSNMLTWLCPTA----ISHLK--DGTSFPT 273
             +G  KN   V G     WL P      I ++   +G  FPT
Sbjct:   245 LGKKKNFEQVFGKKKAFWLLPLYSKDDIDNITSLEGLEFPT 285

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0279395 DDB_G0279395 "DHHC-type zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 202 (76.2 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
 Identities = 32/70 (45%), Positives = 43/70 (61%)

Query:    98 RQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYS 157
             R C +C A+KPPR HHCK C+RC+L+ DHHC WI NC G  N K F   +FY    +  +
Sbjct:   129 RFCSQCCAFKPPRTHHCKQCKRCILKHDHHCPWIGNCTGFRNQKFFIQFLFYVVILTSIT 188

Query:   158 MVMIITSAFH 167
             +  +  S F+
Sbjct:   189 ITTLTISGFY 198

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2101806 AT3G60800 "AT3G60800" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 87/269 (32%), Positives = 126/269 (46%)

Query:     8 SVPIIAVFLLLGFVYY---ITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVA 64
             S+ I+ V  ++G  YY   +T +       GL + A L   ++F  LL + ++S+   V 
Sbjct:    24 SIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAALTILILFHFLLAMLLWSYFSVVF 83

Query:    65 ADPGHVPSAYVPDVEDDSG-----------GASSDQELKKAAERRQCDKCSAYKPPRAHH 113
              DPG VP  + P  +++ G           G  SD        R  C KC+  KP R HH
Sbjct:    84 TDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSSSSNPRVRF-CRKCNQLKPSRCHH 142

Query:   114 CKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYA-TSGSIYSMVMIITS-AFHKNWD 171
             C VC RCVL+MDHHC+W+ NCVG  NYK F L +FY     ++ ++V++    AF  + +
Sbjct:   143 CSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTLVLMPHFIAFFSDEE 202

Query:   172 LDGRVPLKTFYVFCGTVMXXXXXXXXXXXG-WHIYLIIHNMTTIEYHEGIRAAWLAKKSG 230
             + G  P      F   V+              HI L+  N TTIE +E        KK+ 
Sbjct:   203 IPG-TPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAGNTTTIEAYE--------KKTT 253

Query:   231 LSYRHPFDVGVYKNISLVLGSNMLTWLCP 259
               +R  +D+G  KN   V G +   WL P
Sbjct:   254 TKWR--YDLGKKKNFEQVFGMDKRYWLIP 280

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 82/252 (32%), Positives = 120/252 (47%)

Query:    21 VYYITIFIFIKDWAGLQTSAGLLNAL-IFTL--LLCLCVFSFSVAVAADPGHVPSAYVP- 76
             V  +  F F+  WA    + G    L  F L  +L + ++S+   V  DPG VP+ + P 
Sbjct:    54 VLVLAFFHFL--WAQSSLACGFTFVLSTFELPRILIMLLWSYFSVVVTDPGGVPTGWRPE 111

Query:    77 -DVEDDSGGAS--SDQELKKAAER--RQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWI 131
              D+E   G  +   +  +  ++    R C KC+ YKPPR+HHC VC RC+L+MDHHC+W+
Sbjct:   112 LDIEKSEGNQALIGEASVGDSSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWV 171

Query:   132 NNCVGHWNYKAFFLLVFYA-TSGSIYSMVMI-ITSAFHKNWDLDGRV-PLKTFYVFCGTV 188
              NCVG  NYK+F L +FY     ++ ++ ++ I   F  + D D  V P      F   V
Sbjct:   172 VNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSDGDGDITVSPGSLAASFVAFV 231

Query:   189 MXXXXXXXXXXXG-WHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISL 247
             +              HI L+  N TTIE +E     W           P++VG   N   
Sbjct:   232 LNIAFALSVLGFLIMHIMLVARNTTTIEAYEKHTVNW-----------PYNVGRKTNFEQ 280

Query:   248 VLGSNMLTWLCP 259
             V GS+ + W  P
Sbjct:   281 VFGSDKMYWFVP 292

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

FB|FBgn0033474 CG1407 [Drosophila melanogaster (taxid:7227)]

 Score = 282 (104.3 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
 Identities = 66/183 (36%), Positives = 95/183 (51%)

Query:    98 RQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYS 157
             R C+KC   KP RAHHC VC  CVL+MDHHC W+NNCV  +NYK F L + YA    +Y 
Sbjct:   129 RFCEKCKIIKPDRAHHCSVCSCCVLKMDHHCPWVNNCVNFYNYKYFVLFLGYAL---VYC 185

Query:   158 MVMIITSA--FHKNWDLD-GRVP---LKTFYV-FCGTVMXXXXXXXXXXXGWHIYLIIHN 210
             + +  TS   F + W +  G++    +  F++ F   +            G+HIYL++ N
Sbjct:   186 LYVAFTSLHDFVEFWKVGAGQLNASGMGRFHILFLFFIAIMFAISLVSLFGYHIYLVLVN 245

Query:   211 MTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTS 270
              TT+E     RA  + +  G   ++ +++G Y N   V G +   W  P   S   DG S
Sbjct:   246 RTTLE---SFRAP-IFRVGGPD-KNGYNLGRYANFCEVFGDDWQYWFLPV-FSSRGDGYS 299

Query:   271 FPT 273
             +PT
Sbjct:   300 YPT 302

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISS

GENEDB_PFALCIPARUM|PF10_0273 PF10_0273 "DHHC-type zinc finger protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 79/250 (31%), Positives = 125/250 (50%)

Query:    17 LLGFVYYITIFIFI---KDWAGLQT-SAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPS 72
             LL  ++Y  + + I   K +  +   + G    L F +LL L ++SF      +PG++P 
Sbjct:    14 LLPVMFYCMVLLQINVEKQYVNIDLLNEGYTKLLTFHILLLLLIWSFYKTYKVNPGNIPD 73

Query:    73 AYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWIN 132
              Y   V+ + G     +E +K  E R C     YKP R+H+C+   + VL+MDH+C W+ 
Sbjct:    74 NYEWKVDPNIGRI---KEREKTGELRYCIHEKKYKPDRSHYCRAIEKNVLKMDHYCPWVA 130

Query:   133 NCVGHWNYKAFFLLVFYATSGSIYSMVMIITSA--FHKNWDLDGRVPLKTFYVFCGTVMX 190
             NCVG +NYK F L +FYA    +Y  +   TS   F+ N ++   +  + FY+F   V+ 
Sbjct:   131 NCVGFYNYKFFLLSLFYANICCLYVNINCYTSFPNFYSNPNI---LFNEVFYLFLEIVLA 187

Query:   191 XXXXXXXXXXG-WHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVL 249
                         +HIYL   N TT+E+   +   W  +K  +     +D+GV +N   VL
Sbjct:   188 SVILIIIFPFFLFHIYLTSKNYTTLEFC--VTGQW--EKGNI-----YDLGVEENFKQVL 238

Query:   250 GSNMLTWLCP 259
             G N+L W+ P
Sbjct:   239 GDNILLWIFP 248

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q500Z2	ZDH20_ARATH	2, ., 3, ., 1, ., -	0.6192	0.9136	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018152001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (276 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	278
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	2e-39
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	9e-30

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  134 bits (340), Expect = 2e-39
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 56  VFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCK 115
           ++S+   +  DPG+VP       ++      S++  ++  E + C  C+  KPPR+HHC+
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEED-ELKFCSTCNIIKPPRSHHCR 59

Query: 116 VCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFH---KNWDL 172
           VC RCVLR DHHC W+NNC+G  N+K F L + Y T   I  +V+      +        
Sbjct: 60  VCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELF 119

Query: 173 DGRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEY 216
              +      +    + L   L L  LL +H+YLI+ N+TT EY
Sbjct: 120 FFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEY 163

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  113 bits (285), Expect = 9e-30
 Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 42/293 (14%)

Query: 1   MKCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFS 60
           M    FL   I+   LL+       + +FI  +                ++L L  FS+ 
Sbjct: 30  MFIGLFLLSRIVVYTLLVIVKSLSLVVLFIILFI---------------VILVLASFSYL 74

Query: 61  VAVAADPGHVPSAYVPDVEDDSGGASSDQEL---KKAAERRQCDKCSAYKPPRAHHCKVC 117
           + + +DPG     Y+ +    SG   +   L    K      C  C+ YKPPR+HHC +C
Sbjct: 75  LLLVSDPG-----YLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSIC 129

Query: 118 RRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVP 177
            RCVL+ DHHC WINNCVG  NY+ F+  + Y    ++  ++          + +     
Sbjct: 130 NRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTA-YYIAGIFSIRHDTS 188

Query: 178 LKTFYVFCGTVMLALCLILGTLLGW--HIYLIIHNMTTIEYHEGIR------AAWLAKKS 229
           L   ++  G  +L +   + T L     IYLI++N+TTIE+ +  R         L ++S
Sbjct: 189 LAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRES 248

Query: 230 GLSYRH---------PFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPT 273
            L + +         P D+G+ +N+S + GSN L WL P   ++  +   F  
Sbjct: 249 NLPFTNIFDSSEGALPLDLGIGQNLSTIKGSNALYWLTPL-HTNYCNSYDFSL 300

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	278
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.98
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.97
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	95.59
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	94.21
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	90.6
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	90.37
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	88.69
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	88.14
PF13248	26	zf-ribbon_3: zinc-ribbon domain	86.57
PTZ00303	1374	phosphatidylinositol kinase; Provisional	85.9

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=9.6e-57  Score=392.24  Aligned_cols=264  Identities=41%  Similarity=0.728  Sum_probs=208.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHhhheeheeecccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 023733            2 KCQRFLSVPIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDD   81 (278)
Q Consensus         2 ~~~~~~~~pv~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~y~~~~~~dPG~vp~~~~~~~~~~   81 (278)
                      .++|  ++|++++..++++.||++++.+.-.+.... ....+..++++++.++.+|+|++++++|||.+|..+.++.+++
T Consensus         9 ~~~r--~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~-~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~   85 (307)
T KOG1315|consen    9 KCLR--WIPVLIILLVIGWTYYVYVAVLCILSISLT-IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDE   85 (307)
T ss_pred             hhhc--chhheeeeeeEEEEEEEeehhhhHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCcc
Confidence            3456  899999999999999999998887766543 5566778899999999999999999999999999988877765


Q ss_pred             CCCC-CChH-------HHHhhccccccccccccCCCCCCCCccccccccCCcccccccccccccccHHHHHHHHHHHHHH
Q 023733           82 SGGA-SSDQ-------ELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSG  153 (278)
Q Consensus        82 ~~~~-~~~~-------e~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~  153 (278)
                      +... ....       ....+|..|+|.+|+.+||+||||||.|+|||+||||||||+|||||.+|||+|++|++|+.+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~  165 (307)
T KOG1315|consen   86 DSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLY  165 (307)
T ss_pred             ccccccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHH
Confidence            4211 1111       1234458999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccccCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHhcCCC
Q 023733          154 SIYSMVMIITSAFHKNWDLDGRVP-LKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLS  232 (278)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~li~~n~Tt~E~~~~~~~~~~~~~~~~~  232 (278)
                      +++.++.....+...........+ ....++++.++++.+++.+++++++|++||++|+||+|.++....     ..+..
T Consensus       166 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~-----~~~~~  240 (307)
T KOG1315|consen  166 SIYVLVTTLIGFTKYFQGGAGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVF-----RSGLH  240 (307)
T ss_pred             HHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccccc-----ccccc
Confidence            988887766655442111011112 233444555566777888888999999999999999998876311     22334


Q ss_pred             ccCCCChhHHHHHHHhcCCCCccccccccCCCCCCCceeeccCC
Q 023733          233 YRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRH  276 (278)
Q Consensus       233 ~~~pyd~G~~~N~~~vfG~~~~~W~~P~~~~~~~dG~~~~~~~~  276 (278)
                      ..+.|++  ..|++++||+++..|++|.. ++.+||.+++...+
T Consensus       241 ~~~~~~~--~~n~~~vfg~~~~~wl~P~~-~s~~~~~~~~~~~~  281 (307)
T KOG1315|consen  241 NKNGFNL--YVNFREVFGSNLLYWLLPID-SSWGDGVSFPLRGD  281 (307)
T ss_pred             ccCCcce--eecHHHHhCCCceEEecccc-CccccCcccccccc
Confidence            4566666  88999999999999999998 77888888777654

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=3e-51  Score=352.84  Aligned_cols=252  Identities=28%  Similarity=0.523  Sum_probs=180.3

Q ss_pred             CCCcchh-HHHHHHHHHHHHhhheeheeecccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccc
Q 023733            3 CQRFLSV-PIIAVFLLLGFVYYITIFIFIKDWAGLQTSAGLLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDD   81 (278)
Q Consensus         3 ~~~~~~~-pv~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~y~~~~~~dPG~vp~~~~~~~~~~   81 (278)
                      .||++-. |+..+-++ ........+.-.-.|....+..++.+.+.|.+...|++++|+.+++++||++|.+|.|+...|
T Consensus         9 ~rr~~hwGpi~alsii-t~i~~~~~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D   87 (414)
T KOG1314|consen    9 FRRFLHWGPITALSII-TIITSTTGYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKD   87 (414)
T ss_pred             hhheeccccHHHHHHH-HHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChh
Confidence            4566655 55443332 222212222222234445566778888899999999999999999999999999999976655


Q ss_pred             CCCCCChHHHHhhccccccccccccCCCCCCCCccccccccCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 023733           82 SGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMI  161 (278)
Q Consensus        82 ~~~~~~~~e~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~  161 (278)
                      +        .    -.++|.+|+.+|+||||||+.|||||.+|||||||+|||||..||.+|+.||++..++|+-+.++.
T Consensus        88 ~--------~----~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~  155 (414)
T KOG1314|consen   88 E--------M----FLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIIL  155 (414)
T ss_pred             H--------H----HHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeee
Confidence            2        1    568999999999999999999999999999999999999999999999999999999877665544


Q ss_pred             HHHHhh---ccc-----cc-CCCCch---hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh----HHHH
Q 023733          162 ITSAFH---KNW-----DL-DGRVPL---KTFYVFC-GTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGI----RAAW  224 (278)
Q Consensus       162 ~~~~~~---~~~-----~~-~~~~~~---~~~~~~~-~~~~~~~~~~~~~l~~~~~~li~~n~Tt~E~~~~~----~~~~  224 (278)
                      +...++   ..|     .. ......   .++..++ .-++++..+++++|++.|+..|++|+|.+|.+..+    |..+
T Consensus       156 ~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~  235 (414)
T KOG1314|consen  156 VCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREY  235 (414)
T ss_pred             hhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHh
Confidence            433322   111     11 011111   1112222 22335567788999999999999999999998733    3333


Q ss_pred             HHHhcCCCccCCCChhHHHHHHHhcCCCCccccccccCCCCCCCceeeccCC
Q 023733          225 LAKKSGLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKDGTSFPTVRH  276 (278)
Q Consensus       225 ~~~~~~~~~~~pyd~G~~~N~~~vfG~~~~~W~~P~~~~~~~dG~~~~~~~~  276 (278)
                      ...+..++...|||+|++.|+++||-.+.         .+.|||++||+.++
T Consensus       236 ~~~d~~~~f~ypydlgWr~n~r~vf~~~~---------~~~gdg~~wPv~~g  278 (414)
T KOG1314|consen  236 YFNDDEGEFTYPYDLGWRINLREVFFQNK---------KEEGDGIEWPVVEG  278 (414)
T ss_pred             hccCCCCceeeeccccccccHHHHhhhcc---------ccCCCCccccccCc
Confidence            33333356789999999999999985442         46799999998654

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2.8e-45  Score=326.58  Aligned_cols=204  Identities=34%  Similarity=0.652  Sum_probs=146.1

Q ss_pred             cCCCCCCCCCCCCCccc-CCCCCChHH-HHhhccccccccccccCCCCCCCCccccccccCCcccccccccccccccHHH
Q 023733           65 ADPGHVPSAYVPDVEDD-SGGASSDQE-LKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKA  142 (278)
Q Consensus        65 ~dPG~vp~~~~~~~~~~-~~~~~~~~e-~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k~  142 (278)
                      +|||.+|++..+..+.. +....+..+ .....+.+||.+|+.+||||||||+.||+||+||||||||+|||||++|||+
T Consensus        79 sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~  158 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRY  158 (299)
T ss_pred             CCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHH
Confidence            59999998632222211 000000111 1112278999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccc----ccC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Q 023733          143 FFLLVFYATSGSIYSMVMIITSAFHKNW----DLD--GRVPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEY  216 (278)
Q Consensus       143 Fi~fl~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~li~~n~Tt~E~  216 (278)
                      |++|++++++++++..+.....+.....    ...  .........+++++..+..+..++.|+.+|++++.+|+||+|.
T Consensus       159 F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~  238 (299)
T KOG1311|consen  159 FVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYES  238 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhh
Confidence            9999999999999988887777654111    110  1111222333444445566677788999999999999999998


Q ss_pred             hhhhHHHHHHHhcCCCccCCCChhHHHHHHHhcCCC-CccccccccCC--CCCCCceeeccCC
Q 023733          217 HEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGSN-MLTWLCPTAIS--HLKDGTSFPTVRH  276 (278)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~pyd~G~~~N~~~vfG~~-~~~W~~P~~~~--~~~dG~~~~~~~~  276 (278)
                      .++.        ..+...++||+|.++|++++||.+ ...|+-|....  .+.||..++..+.
T Consensus       239 ~~~~--------~~~~~~~~~~~g~~~n~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~  293 (299)
T KOG1311|consen  239 IKSL--------DFVSRSNPYDLGLLKNLQEVFGGPLPLSWLSPFARSGPLPHDGEGGPPTPH  293 (299)
T ss_pred             hhcc--------ccccccCCCchhHHHHHHHHhCCCCCcccccccccCCCCCCCCCCCCcccc
Confidence            7651        111124899999999999999975 57999998753  5667777665443

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=1.3e-41  Score=284.89  Aligned_cols=177  Identities=33%  Similarity=0.555  Sum_probs=133.5

Q ss_pred             ccccccccccCCCCCCCCccccccccCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cccc
Q 023733           97 RRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFH-----KNWD  171 (278)
Q Consensus        97 ~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~~~~~~~-----~~~~  171 (278)
                      ..+|.+|+.+||||+||||.||+||++|||||||+|||||..|||||++|++|+++++.|..++..+...+     .+.+
T Consensus       102 ~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~t  181 (309)
T KOG1313|consen  102 DSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEIT  181 (309)
T ss_pred             ccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            47999999999999999999999999999999999999999999999999999999999988775544433     0000


Q ss_pred             -c--C---CCCchh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHhcCCCccC
Q 023733          172 -L--D---GRVPLK----------TFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRH  235 (278)
Q Consensus       172 -~--~---~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~~  235 (278)
                       .  +   ...+..          ...+-+.++...++++++.+..||.++|.+|.|++|++.....++....  +...|
T Consensus       182 ay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a--~~R~~  259 (309)
T KOG1313|consen  182 AYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLA--HLRSN  259 (309)
T ss_pred             cccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHH--hccCC
Confidence             0  0   000111          1112233334556778899999999999999999999765443322211  22379


Q ss_pred             CCChhHHHHHHHhcCC--CCccc---cccccCCCCCCCceeeccC
Q 023733          236 PFDVGVYKNISLVLGS--NMLTW---LCPTAISHLKDGTSFPTVR  275 (278)
Q Consensus       236 pyd~G~~~N~~~vfG~--~~~~W---~~P~~~~~~~dG~~~~~~~  275 (278)
                      |++.|.++||+.++|-  ++-.|   ++|....+.+.|..+++++
T Consensus       260 ~~n~g~k~nWr~fLg~~~~r~~wk~v~lPt~~~p~~~~~~~~~~d  304 (309)
T KOG1313|consen  260 PTNFGGKANWRNFLGLFRGRHFWKTVLLPTIRKPVKYGDSKEKSD  304 (309)
T ss_pred             CcccchHHHHHHhhccccCCceeEEEeccccccccccCCcccccc
Confidence            9999999999999983  34355   7898778888999998765

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=1.4e-40  Score=294.70  Aligned_cols=229  Identities=30%  Similarity=0.544  Sum_probs=162.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccCCCCCChHHHHhhccccccccccccCCCCCCCCccccccccCC
Q 023733           45 ALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRM  124 (278)
Q Consensus        45 ~~~~~~l~~l~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~e~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~  124 (278)
                      .+.+.+...+...+|+..+.+|||..+++.....-++  ...+..+..+.+..++|.+|+.+||+|||||+.||+||+||
T Consensus        59 ~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~  136 (309)
T COG5273          59 IILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRE--TISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKF  136 (309)
T ss_pred             hhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhh--hhhhhhhcCccccceeccccccccCCCCccchhhcchhhcc
Confidence            4455566677889999999999999885322111111  01122223445588999999999999999999999999999


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCchhHHHHHH--HHHHHHHHHHHHHHHHH
Q 023733          125 DHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFC--GTVMLALCLILGTLLGW  202 (278)
Q Consensus       125 DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~  202 (278)
                      ||||||+|||||.+|||+|++|++++...++..+......+....... .........++.  ....+.+++.+..++.+
T Consensus       137 DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~~~~~~~~f~~~~~~~~~  215 (309)
T COG5273         137 DHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIR-HDTSLAICFLIFGCSLLGVVFFIITTLLLLF  215 (309)
T ss_pred             CccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-CChHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998877666665554443321111 111111122222  23445556677888899


Q ss_pred             HHHHHHhccchhhhhhhhHHHHHHH------hc---------CCCccCCCChhHHHHHHHhcCCCCccccccccCCCCCC
Q 023733          203 HIYLIIHNMTTIEYHEGIRAAWLAK------KS---------GLSYRHPFDVGVYKNISLVLGSNMLTWLCPTAISHLKD  267 (278)
Q Consensus       203 ~~~li~~n~Tt~E~~~~~~~~~~~~------~~---------~~~~~~pyd~G~~~N~~~vfG~~~~~W~~P~~~~~~~d  267 (278)
                      +.+++..|+|++|..+..+.....+      .+         ..+...|+|.|.-+|+..++|.+...|..|..+.. .+
T Consensus       216 ~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~  294 (309)
T COG5273         216 LIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKGSNALYWLTPLHTNY-CN  294 (309)
T ss_pred             HHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCccccceeecCCCceeeccccccCC-CC
Confidence            9999999999999887644432211      11         12245688999999999999999999999976443 77


Q ss_pred             CceeeccCCC
Q 023733          268 GTSFPTVRHT  277 (278)
Q Consensus       268 G~~~~~~~~~  277 (278)
                      +..|+.+.++
T Consensus       295 ~~~~~~~~~~  304 (309)
T COG5273         295 SYDFSLRSDT  304 (309)
T ss_pred             ccCcccchhh
Confidence            7777776654

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=3.1e-41  Score=277.97  Aligned_cols=163  Identities=30%  Similarity=0.625  Sum_probs=118.7

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCC-cccCCC-----CCChHHHHhhccccccccccccCCCCCCCCccccccccCCcccccc
Q 023733           57 FSFSVAVAADPGHVPSAYVPDV-EDDSGG-----ASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLW  130 (278)
Q Consensus        57 ~~y~~~~~~dPG~vp~~~~~~~-~~~~~~-----~~~~~e~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw  130 (278)
                      ++|++++++|||++|+...++. +.+...     .....+....++.++|.+|+..||+|||||+.||+||+++||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            5789999999999998621111 111100     0111122234489999999999999999999999999999999999


Q ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCch--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023733          131 INNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPL--KTF-YVFCGTVMLALCLILGTLLGWHIYLI  207 (278)
Q Consensus       131 ~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~~~~~~li  207 (278)
                      +|||||++|||+|++|+++..+++++.....+..+.............  ... .+++.+..++.+++++.++++|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998888887666665521111111111  111 13333444566777889999999999


Q ss_pred             Hhccchhhhhhh
Q 023733          208 IHNMTTIEYHEG  219 (278)
Q Consensus       208 ~~n~Tt~E~~~~  219 (278)
                      ++|+||+|.+++
T Consensus       162 ~~n~Tt~E~~~~  173 (174)
T PF01529_consen  162 LRNITTYERIKR  173 (174)
T ss_pred             HcCCcHHHHHHc
Confidence            999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.98  E-value=3.7e-32  Score=229.12  Aligned_cols=173  Identities=28%  Similarity=0.525  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccCCCCCChHHHHhhccccccccccccCCCCCCCCccccccc
Q 023733           42 LLNALIFTLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAERRQCDKCSAYKPPRAHHCKVCRRCV  121 (278)
Q Consensus        42 ~~~~~~~~~l~~l~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~e~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV  121 (278)
                      ..+.+....+.++-.+++..+..+|||.+.++....    .....|.+++-- .....|++|+..||.||+|||.||+||
T Consensus        98 l~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~----~~~~ypYDy~if-~k~~kCSTCki~KPARSKHCsiCNrCV  172 (341)
T KOG1312|consen   98 LHYLILPYLLVIVPLIFFTLTCGSNPGIITKANESL----FLHVYPYDYVIF-PKNVKCSTCKIRKPARSKHCSICNRCV  172 (341)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhcc----ceeccCccceee-cCCCccccccCCCccccccchHHHHHH
Confidence            444454455566677888899999999987532111    111122222111 034789999999999999999999999


Q ss_pred             cCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccc----------ccCCCCchhHHHHHHHHH
Q 023733          122 LRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFH---KNW----------DLDGRVPLKTFYVFCGTV  188 (278)
Q Consensus       122 ~~~DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~~  188 (278)
                      .|+||||.|+|||||++|.|||++|++....++.|+.+-.......   +..          ....+.-.....++.++.
T Consensus       173 ~rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi~ln~~sdl~q~v~ilt~~~g~~ks~~~L~~yl~la~~  252 (341)
T KOG1312|consen  173 HRFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFIVLNVMSDLYQEVYILTLGHGHVKSTVFLIQYLFLAFP  252 (341)
T ss_pred             HHhccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHheehhhccccchheeeeeeeecchhhHHHHHHHHHHHhc
Confidence            9999999999999999999999999999988888777665544221   100          000000011111111111


Q ss_pred             H-------HHHHHHHHHHHHHHHHHHHhccchhhhhhh
Q 023733          189 M-------LALCLILGTLLGWHIYLIIHNMTTIEYHEG  219 (278)
Q Consensus       189 ~-------~~~~~~~~~l~~~~~~li~~n~Tt~E~~~~  219 (278)
                      -       ....-+++.-..+-.++..+|+||.|+.++
T Consensus       253 ~~v~~l~~~~~~~~~~~Y~~f~~y~~~t~~~~~~W~~~  290 (341)
T KOG1312|consen  253 RIVFMLGFVVVLSFLGGYLLFVLYLAATNQTTNEWYRG  290 (341)
T ss_pred             cceeeeehhhhhhHhHHHHHHHHHHHhccCCchhhhcc
Confidence            0       112233566677788999999999998776

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.97  E-value=2.7e-31  Score=245.81  Aligned_cols=195  Identities=24%  Similarity=0.382  Sum_probs=127.1

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccCCCCCChHHHHhhccc-cccccccccCCCCCCCCccccccccCCccc
Q 023733           49 TLLLCLCVFSFSVAVAADPGHVPSAYVPDVEDDSGGASSDQELKKAAER-RQCDKCSAYKPPRAHHCKVCRRCVLRMDHH  127 (278)
Q Consensus        49 ~~l~~l~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~e~~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHH  127 (278)
                      .+..+.+++++.+...+|||++|......    +....+..|..+.+.. ++|.+|.+.||.|||||+.|||||.|||||
T Consensus       375 i~~~l~~~~~f~~~~rsDPg~i~~~~~~~----~~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHh  450 (600)
T KOG0509|consen  375 IISVLAYFITFGLFLRSDPGFIPTSTEVG----RETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHH  450 (600)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCchhhH----HHHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccC
Confidence            33344456666677779999998632111    1001112222222244 699999999999999999999999999999


Q ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCchhHHHHHHHHHHHH--HH------------
Q 023733          128 CLWINNCVGHWNYKAFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGRVPLKTFYVFCGTVMLA--LC------------  193 (278)
Q Consensus       128 Cpw~~nCIG~~N~k~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------  193 (278)
                      |||++||||.+|||+|+.|++.+...+.+.+.....++.......   ......+.........  +.            
T Consensus       451 CPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~t  527 (600)
T KOG0509|consen  451 CPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENAS---TIYVGFLIAVQAFRIPKPVTGNLLGNEDLNPT  527 (600)
T ss_pred             CCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH---HHHHHHHHHHHHHhCCccceeeeeeccccccc
Confidence            999999999999999999999988777666665554443321110   0011011100000000  00            


Q ss_pred             HHHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHhcCCCccCCCChhHHHHHHHhcCC
Q 023733          194 LILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKNISLVLGS  251 (278)
Q Consensus       194 ~~~~~l~~~~~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~~pyd~G~~~N~~~vfG~  251 (278)
                      -..+..-..|...++.+.||+|+++..|++....+.+. .++|++.|+++|+.+++=.
T Consensus       528 ~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~~~-~~~~~s~g~~~Nl~df~~~  584 (600)
T KOG0509|consen  528 WGSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKRGP-TRSPFSPGPIRNLVDFFLC  584 (600)
T ss_pred             cccccccccccceeeecccHHHHHHHHHhhccccccCc-CCCCCCchhhhcchheeec
Confidence            00111222344568999999999999888776655553 6899999999999998843

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=95.59  E-value=0.17  Score=45.37  Aligned_cols=163  Identities=13%  Similarity=0.136  Sum_probs=84.7

Q ss_pred             CCCCCCCCccccccccCCcccccccccccccccHH-----------HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Q 023733          107 KPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYK-----------AFFLLVFYATSGSIYSMVMIITSAFHKNWDLDGR  175 (278)
Q Consensus       107 kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k-----------~Fi~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (278)
                      +-.+.+.|++|+.-...+-|||.-=|.||-..-|.           -.=.|..++......+.++.......... . ..
T Consensus       105 ~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~-~-~~  182 (309)
T COG5273         105 KFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAG-I-FS  182 (309)
T ss_pred             ccccceeccccccccCCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-cc
Confidence            44577889999999999999999999999877764           44456666655555555555544443321 1 11


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHhcCCCccCCCChhHHHH--HHHhcCCCC
Q 023733          176 VPLKTFYVFCGTVMLALCLILGTLLGWHIYLIIHNMTTIEYHEGIRAAWLAKKSGLSYRHPFDVGVYKN--ISLVLGSNM  253 (278)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~li~~n~Tt~E~~~~~~~~~~~~~~~~~~~~pyd~G~~~N--~~~vfG~~~  253 (278)
                      ........+..++.......+..+......++..+....+.....+.....+........++.++.  |  +...+...+
T Consensus       183 ~~~~~~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~  260 (309)
T COG5273         183 IRHDTSLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRES--NLPFTNIFDSSE  260 (309)
T ss_pred             ccCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccC--CcCceeccCCCc
Confidence            222222233333332223334445555555666666666655443332222211111223333332  2  122333333


Q ss_pred             ccccccccCCCCCCCceeeccCC
Q 023733          254 LTWLCPTAISHLKDGTSFPTVRH  276 (278)
Q Consensus       254 ~~W~~P~~~~~~~dG~~~~~~~~  276 (278)
                        |.+|.. .+.++|+++.+.++
T Consensus       261 --~~~~~~-~~~~~~~~~i~~~~  280 (309)
T COG5273         261 --GALPLD-LGIGQNLSTIKGSN  280 (309)
T ss_pred             --cccccc-cCccccceeecCCC
Confidence              666654 55567777666544

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.21  E-value=0.54  Score=38.03  Aligned_cols=50  Identities=20%  Similarity=0.385  Sum_probs=35.2

Q ss_pred             cccccccccccCCCCCCCCccccccccCCcccccccccccccccHHHHHHHHHHHHHHHHH
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRRCVLRMDHHCLWINNCVGHWNYKAFFLLVFYATSGSIY  156 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~k~Fi~fl~~~~~~~~~  156 (278)
                      +.+.|..|+.-...+-|||..-|+||.+.-|.           ..-.|+++..-..+..++
T Consensus        61 Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~~-----------~F~~fl~~~~~~~~~~~~  110 (174)
T PF01529_consen   61 RSHHCRVCNRCVLRFDHHCPWLGNCIGRRNHR-----------YFLLFLLYLCLYCLYFFI  110 (174)
T ss_pred             cceeccccccccccccccchhhccccccccHH-----------HHHHHHHHHHHHHHHHHH
Confidence            67888888888888888888888888887662           344566655544444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=90.60  E-value=0.15  Score=27.11  Aligned_cols=21  Identities=29%  Similarity=0.632  Sum_probs=18.7

Q ss_pred             ccccccccCCCCCCCCccccc
Q 023733           99 QCDKCSAYKPPRAHHCKVCRR  119 (278)
Q Consensus        99 ~C~~C~~~kP~Rs~HC~~C~~  119 (278)
                      +|+.|...-++.+..|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999999985

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=90.37  E-value=0.87  Score=40.57  Aligned_cols=52  Identities=17%  Similarity=0.370  Sum_probs=39.5

Q ss_pred             CCCCCccccccccCCcccccccccccccccH-----------HHHHHHHHHHHHHHHHHHHHH
Q 023733          110 RAHHCKVCRRCVLRMDHHCLWINNCVGHWNY-----------KAFFLLVFYATSGSIYSMVMI  161 (278)
Q Consensus       110 Rs~HC~~C~~CV~~~DHHCpw~~nCIG~~N~-----------k~Fi~fl~~~~~~~~~~~~~~  161 (278)
                      +.++|..|+..+..+-|||+.=|+||-..-|           |-+-.|+.++..+.+..+...
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~  174 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLAL  174 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999988765           567778866653333333333

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=88.69  E-value=0.24  Score=31.13  Aligned_cols=24  Identities=33%  Similarity=0.841  Sum_probs=22.4

Q ss_pred             cccccccccccCCCCCCCCccccc
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRR  119 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~  119 (278)
                      ....|.+|...-|+||..|+.||.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            678999999999999999999986

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=88.14  E-value=1.9  Score=38.55  Aligned_cols=31  Identities=23%  Similarity=0.453  Sum_probs=26.2

Q ss_pred             cccccccccccCCCCCCCCccccccccCCcc
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRRCVLRMDH  126 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DH  126 (278)
                      +...|+.|+.=--..=|||..-|+||.-.++
T Consensus       122 RaHHCsvC~rCvLKmDHHCpWi~nCVgf~Ny  152 (307)
T KOG1315|consen  122 RAHHCSVCNRCVLKMDHHCPWINNCVGFRNY  152 (307)
T ss_pred             ccccchhhhhhhhccccCCcceeceecccch
Confidence            6678888887777888999999999987665

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=86.57  E-value=0.4  Score=26.15  Aligned_cols=22  Identities=32%  Similarity=0.680  Sum_probs=19.0

Q ss_pred             cccccccccCCCCCCCCccccc
Q 023733           98 RQCDKCSAYKPPRAHHCKVCRR  119 (278)
Q Consensus        98 ~~C~~C~~~kP~Rs~HC~~C~~  119 (278)
                      ++|+.|...-++-++.|+.||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6799999888889999999885

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=85.90  E-value=0.55  Score=46.48  Aligned_cols=22  Identities=36%  Similarity=0.825  Sum_probs=18.0

Q ss_pred             cccccccccCC-------CCCCCCccccc
Q 023733           98 RQCDKCSAYKP-------PRAHHCKVCRR  119 (278)
Q Consensus        98 ~~C~~C~~~kP-------~Rs~HC~~C~~  119 (278)
                      ..|..|+..-.       -|-|||+.||+
T Consensus       461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CcccCcCCcccccccccccccccccCCcc
Confidence            67999986654       39999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	278
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	85.39
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	84.82

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=85.39  E-value=0.3  Score=30.52  Aligned_cols=27  Identities=30%  Similarity=0.613  Sum_probs=23.8

Q ss_pred             cccccccccccCCCCCCCCcccccccc
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRRCVL  122 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~  122 (278)
                      ....|..|...-|+++..|+.||.--+
T Consensus        13 ~k~iCpkC~a~~~~gaw~CrKCG~~~l   39 (51)
T 3j21_g           13 KKYVCLRCGATNPWGAKKCRKCGYKRL   39 (51)
T ss_dssp             SEEECTTTCCEECTTCSSCSSSSSCCC
T ss_pred             CCccCCCCCCcCCCCceecCCCCCccc
Confidence            568999999999999999999987544

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=84.82  E-value=0.3  Score=30.90  Aligned_cols=27  Identities=37%  Similarity=0.844  Sum_probs=23.6

Q ss_pred             cccccccccccCCCCCCCCcccccccc
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRRCVL  122 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~  122 (278)
                      ....|.+|...-|+||..|+.||..-+
T Consensus        18 ~k~ICrkC~ARnp~~A~~CRKCg~~~L   44 (56)
T 2ayj_A           18 LKKVCRKCGALNPIRATKCRRCHSTNL   44 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCCCCE
T ss_pred             chhhhccccCcCCcccccccCCCCCCC
Confidence            568999999999999999999986544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	278
d2ayja1	56	g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolob	4e-04

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} Length = 56

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 88  DQELKKAAERRQCDK-----CSAYKPPRAHHCKVCRRCVLRM 124
           D    +  ++R   K     C A  P RA  C+ C    LR+
Sbjct: 5   DPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHSTNLRL 46

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	278
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	88.82
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	84.18

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=88.82  E-value=0.064  Score=32.26  Aligned_cols=24  Identities=38%  Similarity=0.931  Sum_probs=21.9

Q ss_pred             cccccccccccCCCCCCCCccccc
Q 023733           96 ERRQCDKCSAYKPPRAHHCKVCRR  119 (278)
Q Consensus        96 ~~~~C~~C~~~kP~Rs~HC~~C~~  119 (278)
                      ....|.+|...-|+||..|+.||.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            568999999999999999998875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.18  E-value=0.12  Score=25.30  Aligned_cols=16  Identities=44%  Similarity=1.130  Sum_probs=13.2

Q ss_pred             CCCCccccccccCCcc
Q 023733          111 AHHCKVCRRCVLRMDH  126 (278)
Q Consensus       111 s~HC~~C~~CV~~~DH  126 (278)
                      .|.|..||+|..|-|.
T Consensus         1 phkc~~c~kcfsrkdk   16 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDK   16 (26)
T ss_dssp             CCCBTTTTBCCCCHHH
T ss_pred             CCccchhhhHhcchhH
Confidence            3789999999988763