Citrus Sinensis ID: 023749

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MEIIAGTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVKWLYNASISDPTSRLLGY
ccEEEccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHccEEEEEEccHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccc
*****GTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTS***********************************************ELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVKWLYNASISDP*******
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MEIIAGTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGFPESEVLPQLFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVKWLYNASISDPTSRLLGY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable inactive shikimate kinase like 1, chloroplastic Required for chloroplast biogenesis.probableQ9LW20

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NWJ, chain A
Confidence level:very confident
Coverage over the Query: 77-268
View the alignment between query and template
View the model in PyMOL
Template: 3M6A, chain A
Confidence level:probable
Coverage over the Query: 47-123
View the alignment between query and template
View the model in PyMOL