Citrus Sinensis ID: 023783


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
MFGRMSLSRLSSRTHILPLLQQSRCVKDVLWSNYKYTRVDTSCYASVWGLMPRCGYGSNMTNGYRKPQSFGSGCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED
cccccccccccccccccHHHHccccccccccccccCECcccccEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccCEEEccHHHHHHHHccccccccccEEEEEEEEECccccccEEECcccEEEEcccccEEEEEEECccccccEEEEEEcccccHHHHHHcccEEEEEEcccccccccEEEEEEEEEEccccccccccccccEEEEEEEEEEEccc
*********LSSRTHILPLLQQSRCVKDVLWSNYKYTRVDTSCYASVWGLMPRCGYG******************************************KMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETV********KDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MFGRMSLSRLSSRTHILPLLQQSRCVKDVLWSNYKYTRVDTSCYASVWGLMPRCGYGSNMTNGYRKPQSFGSGCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cytochrome c oxidase assembly protein COX11, mitochondrial Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.probableQ8GWR0
Cytochrome c oxidase assembly protein COX11, mitochondrial Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.probableA3KMZ6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1SO9, chain A
Confidence level:very confident
Coverage over the Query: 139-276
View the alignment between query and template
View the model in PyMOL