Citrus Sinensis ID: 023896

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEccEEccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEEEEccHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccEccccccccccEcHHHHcHHHHHHHcccccccccEEEEccccccc
Coil and Loop (DISEMBL)
MAEATKKYAVVtgsnkgigFETVRQLASKGITVVLTARDEKRGLEAVEKLKasgvdpelllfhqldisdlasVSSLADFIKtqfgkldiltkgdaevdwskVCYQTYELAVECLKtnyygtkqtCEALipllelsdsprlvnLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKdyeegeianrgwcphssaykVSKAVINAYTRILAkrypkfcvncvcpgfvktdinFHAGILsveegaespvklallpdggptgrfflrkeeapf
Flexible Loop (DISEMBL)
maeatkkyavvtgsnkgigfetVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLlelsdsprLVNLSSYVSALKDLPEKARAvlgdvenlteerIEMVVKDYFKDYEEGEianrgwcphssAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFlrkeeapf
Low Complexity Region (SEG)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered region (IsUnstruct)
*******YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALL******************
Disordered Region (DISOPRED)
****TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered Region (DISEMBL)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered Region (DISPRO)
*****KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	yes	no	1.0	0.929	0.567	9e-89
Q9ZUH5	296	Short-chain dehydrogenase	no	no	1.0	0.929	0.540	3e-83
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	1.0	0.875	0.503	5e-77
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.970	0.858	0.498	1e-72
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.974	0.853	0.506	5e-70
P48758	277	Carbonyl reductase [NADPH	no	no	0.941	0.935	0.392	3e-41
P47727	277	Carbonyl reductase [NADPH	yes	no	0.941	0.935	0.380	4e-40
Q8MI29	277	Carbonyl reductase [NADPH	N/A	no	0.912	0.906	0.392	7e-40
P16152	277	Carbonyl reductase [NADPH	yes	no	0.905	0.898	0.392	6e-39
Q5RCU5	277	Carbonyl reductase [NADPH	yes	no	0.905	0.898	0.388	1e-38

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  326 bits (836), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 210/296 (70%), Gaps = 21/296 (7%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPEL 59
           MAE T +YAVVTG+N+GIGFE  RQLAS+GI VVLT+RDE RGLEAVE LK    +  + 
Sbjct: 1   MAEETPRYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQS 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTKG--------DAEV----------DWSK 101
           LLFHQLD++D AS++SLA+F+KTQFGKLDIL           DAE            W +
Sbjct: 61  LLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDE 120

Query: 102 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPEKARAV 160
           +  +TYEL  EC+K NYYG K+ CEA IPLL+LSDSPR+VN+SS +  LK+ L E A+ +
Sbjct: 121 IITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGI 180

Query: 161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 220
           L D ENLTEERI+ V+     D++EG +  + W    SAY VSKA +N YTR+LAK++P+
Sbjct: 181 LSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKHPE 240

Query: 221 FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG-GPTGRFFLRKEEAPF 275
           F VN VCPGFVKTD+NF  G+LSVEEGA SPV+LALLP    P+G FF RK+ + F
Sbjct: 241 FRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFFSRKQVSEF 296

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  308 bits (789), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/296 (54%), Positives = 203/296 (68%), Gaps = 21/296 (7%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPEL 59
           MAE + +YA+VTG N+GIGFE  RQLA+KGI V+LT+RDEK+GLEAVE LK    +  + 
Sbjct: 1   MAEESPRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQS 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTK------------------GDAEVDWSK 101
           ++FHQLD+SD  SV+SLA+F+KT FGKLDIL                    G     W +
Sbjct: 61  IVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEE 120

Query: 102 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL-PEKARAV 160
              +TYELA EC+K NYYG K+ CEA IPLL+LSDSPR++N+SS++  +K+L  E A+ +
Sbjct: 121 TITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGI 180

Query: 161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 220
           L D ENLTE RI+ V+     D +E     + W    SAY VSKA +NAYTRILAK++P+
Sbjct: 181 LSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKKHPE 240

Query: 221 FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG-GPTGRFFLRKEEAPF 275
             VN VCPGFVKTD+NF  GILSVEEGA SPV+LALLP    P+G FF RK+ + F
Sbjct: 241 IRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSEF 296

Arabidopsis thaliana (taxid: 3702)

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  287 bits (735), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 205/314 (65%), Gaps = 39/314 (12%)

Query: 1   MAEATK--KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDP 57
           MAE T   +YAVVTG NKGIG+ET RQLASKG+ VVLT+RDEK+G+EA+E+LK  S    
Sbjct: 1   MAEKTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTD 60

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDIL----------TKGDAEV---------- 97
           E +LFHQLDI D AS+SSL + IKT+FG+LDIL           +GD +V          
Sbjct: 61  EHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYIS 120

Query: 98  ------------DWSKV---CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN 142
                        W+K        YEL  EC++TNYYG K+  EA IPLL+LS+SPR+VN
Sbjct: 121 IVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVN 180

Query: 143 LSSYVSALKDLPEK-ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 201
           ++S +  LK L  K A  VL D ++LTEE+++ VV ++ KD+ E    ++GW  + +AYK
Sbjct: 181 VASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYK 240

Query: 202 VSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGG 261
           VSKA + AYTR+LA +YP F +N VCPG+ KTD+N + G L+  EGAES V LALLP+ G
Sbjct: 241 VSKASLIAYTRVLATKYPNFRINSVCPGYCKTDVNANTGSLTAGEGAESLVNLALLPNDG 300

Query: 262 PTGRFFLRKEEAPF 275
           P+G FF RKE   F
Sbjct: 301 PSGLFFYRKEVTFF 314

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/301 (49%), Positives = 192/301 (63%), Gaps = 34/301 (11%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG NKGIGFE  +QL+S GI VVLT RD  RGLEAVEKLK S  + E ++FHQLD
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNS--NHENVVFHQLD 70

Query: 67  ISD-LASVSSLADFIKTQFGKLDILTKGDAEVDWS------------------------- 100
           ++D + ++SSLADFIK +FGKLDIL        +S                         
Sbjct: 71  VTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYE 130

Query: 101 -----KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP- 154
                ++  +TYELA ECLK NYYG K   E L+PLL+LSDSPR+VN+SS   +LK +  
Sbjct: 131 KPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSN 190

Query: 155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 214
           E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR+L
Sbjct: 191 ETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL 250

Query: 215 AKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP 274
           AK+ PKF VNCVCPG VKT++N+  G  + +EGA+  V++AL PD GP+G F+   E + 
Sbjct: 251 AKKIPKFQVNCVCPGLVKTEMNYGIGNYTADEGAKHVVRIALFPDDGPSGFFYDCSELSA 310

Query: 275 F 275
           F
Sbjct: 311 F 311

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  264 bits (675), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 203/308 (65%), Gaps = 40/308 (12%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPEL 59
           MAE  ++YA+VTG+NKGIGFE  RQLA KGI V+LT+R+EKRGLEA +KL K   V    
Sbjct: 1   MAE-VQRYALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENR 59

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTK----------GDA-------EVDWSKV 102
           L+FHQLD++DLASV+++A FIK++FGKLDIL            GD        E D+  +
Sbjct: 60  LVFHQLDVTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKAL 119

Query: 103 --------------------CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN 142
                                 + +E A +C+ TNYYG K+  +ALIPLL+LS SPR+VN
Sbjct: 120 QALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVN 179

Query: 143 LSSYVSALKD-LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 201
           +SS   +L     E A+ VLGD + LTEER++ VV+ + KD +EG++    W PH +A +
Sbjct: 180 VSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAER 239

Query: 202 VSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGG 261
           VSKA +NAYT+I AK+YP F +N +CPG+ KTDI FHAG LSV E A+ PVKLALLPDGG
Sbjct: 240 VSKAALNAYTKIAAKKYPSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALLPDGG 299

Query: 262 PTGRFFLR 269
           P+G FF R
Sbjct: 300 PSGCFFPR 307

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  169 bits (427), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 168/288 (58%), Gaps = 29/288 (10%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +++  A+VTG+NKGIGF   R L  K    VVL ARDE+RG  AV+KL+A G+ P    F
Sbjct: 3   SSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPR---F 59

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGT 121
           HQLDI +  S+ +L DF+  ++G LD+L   +A + +       + +  E  +KTN++GT
Sbjct: 60  HQLDIDNPQSIRALRDFLLKEYGGLDVLVN-NAGIAFKVNDDTPFHIQAEVTMKTNFFGT 118

Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVS--ALKD----LPEKARAVLGDVENLTEERIEMV 175
           +  C+ L+PL++     R+VN+SS VS  ALK+    L +K R+     E +TEE +  +
Sbjct: 119 RDVCKELLPLIKPQG--RVVNVSSMVSLRALKNCRLELQQKFRS-----ETITEEELVGL 171

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCPG 229
           +  + +D ++G  A  GW   +SAY V+K  +   +RILA+      R  K  +N  CPG
Sbjct: 172 MNKFVEDTKKGVHAEEGW--PNSAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPG 229

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF 275
           +V+TD+       S EEGAE+PV LALLP    GP G+F   K+  P+
Sbjct: 230 WVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEPW 277

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2

 Score =  164 bits (416), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 164/284 (57%), Gaps = 25/284 (8%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +  A+VTG+NKGIGF  VR L  K +  VVLTARDE RG EAV++L+  G+ P    FHQ
Sbjct: 5   RPVALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPR---FHQ 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQ 123
           LDI +  S+ +L DF+  ++G L++L   +A + +  V    + +  E  +KTN++GT+ 
Sbjct: 62  LDIDNPQSIRALRDFLLQEYGGLNVLVN-NAGIAFKVVDPTPFHIQAEVTMKTNFFGTQD 120

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALK----DLPEKARAVLGDVENLTEERIEMVVKDY 179
            C+ L+P+++       V+ S  + ALK    +L +K R+     E +TEE +  ++  +
Sbjct: 121 VCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKFRS-----ETITEEELVGLMNKF 175

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCPGFVKT 233
            +D ++G  A  GW   +SAY V+K  +   +RI A+      R  K  +N  CPG+V+T
Sbjct: 176 IEDAKKGVHAKEGW--PNSAYGVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRT 233

Query: 234 DINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF 275
           D+       S EEGAE+PV LALLP G  GP G+F   K+  P+
Sbjct: 234 DMAGPKATKSPEEGAETPVYLALLPPGAEGPHGQFVQDKKVEPW 277

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1

 Score =  164 bits (415), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/280 (39%), Positives = 161/280 (57%), Gaps = 29/280 (10%)

Query: 7   KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTGSNKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQL
Sbjct: 6   RVALVTGSNKGIGLAIVRDLCRLFSGEVVLTARDVARGQAAVQQLQAEGLSPR---FHQL 62

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQT 124
           DI DL S+ +L DF+  ++G LD+L   +A + +       + +  E  +KTN++GT+  
Sbjct: 63  DIDDLQSIRTLRDFLLKEYGGLDVLVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 121

Query: 125 CEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEMVVKD 178
           C  L+PL++     R+VN+SS +S  ALK    +L +K R+     E +TEE +  ++  
Sbjct: 122 CTELLPLIK--PQGRVVNISSMMSLRALKSCSPELQQKFRS-----ETITEEELVGLMNK 174

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVK 232
           + +D ++G     GW   SSAY V+K  +   +RI A++        K  +N  CPG+V+
Sbjct: 175 FAEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 232

Query: 233 TDINFHAGILSVEEGAESPVKLALLP--DGGPTGRFFLRK 270
           TD+   +   S EEGAE+PV LALLP    GP G+F + K
Sbjct: 233 TDMAGPSATKSPEEGAETPVYLALLPLDAEGPHGQFVMEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score =  161 bits (407), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 158/278 (56%), Gaps = 29/278 (10%)

Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 64

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
            DL S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT+  C 
Sbjct: 65  DDLQSIRALRDFLRKEYGGLDVLVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 123

Query: 127 ALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEMVVKDYF 180
            L+PL++     R+VN+SS +S  ALK    +L +K R+     E +TEE +  ++  + 
Sbjct: 124 ELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRS-----ETITEEELVGLMNKFV 176

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTD 234
           +D ++G     GW   SSAY V+K  +   +RI A++        K  +N  CPG+V+TD
Sbjct: 177 EDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 234

Query: 235 INFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 270
           +       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 235 MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score =  160 bits (404), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 29/278 (10%)

Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPR---FHQLDI 64

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
            DL S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT+  C 
Sbjct: 65  DDLQSIRALRDFLRKEYGGLDVLVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 123

Query: 127 ALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEMVVKDYF 180
            L+PL++     R+VN+SS +S  ALK    +L +K R+     E +TEE +  ++  + 
Sbjct: 124 ELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRS-----ETITEEELVGLMNKFV 176

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTD 234
           +D ++G     GW   SSAY V+K  +   +RI A++        +  +N  CPG+V+TD
Sbjct: 177 EDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTD 234

Query: 235 INFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 270
           +       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 235 MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
224064013	296	predicted protein [Populus trichocarpa]	0.996	0.925	0.599	2e-96
359489616	297	PREDICTED: (+)-neomenthol dehydrogenase-	0.992	0.919	0.578	5e-94
147800243	298	hypothetical protein VITISV_002460 [Viti	0.992	0.916	0.583	4e-93
225454097	297	PREDICTED: (+)-neomenthol dehydrogenase	0.992	0.919	0.575	1e-92
297745216	298	unnamed protein product [Vitis vinifera]	0.992	0.916	0.56	2e-92
359489600	539	PREDICTED: (+)-neomenthol dehydrogenase	0.989	0.504	0.551	8e-90
356530092	294	PREDICTED: (+)-neomenthol dehydrogenase-	0.996	0.931	0.559	4e-89
297745219	302	unnamed protein product [Vitis vinifera]	0.992	0.903	0.549	3e-87
356566889	528	PREDICTED: LOW QUALITY PROTEIN: (+)-neom	0.989	0.515	0.562	4e-87
356520438	298	PREDICTED: (+)-neomenthol dehydrogenase-	0.996	0.919	0.535	4e-87

>gi|224064013|ref|XP_002301348.1| predicted protein [Populus trichocarpa] gi|222843074|gb|EEE80621.1| predicted protein [Populus trichocarpa]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 178/297 (59%), Positives = 227/297 (76%), Gaps = 23/297 (7%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEATK YAVVTG+NKGIGFE  RQLASKGI VVLT+R+EKRGLE+V+KLK SG+  + +
Sbjct: 1   MAEATKSYAVVTGANKGIGFEICRQLASKGIVVVLTSRNEKRGLESVQKLKESGLS-DFV 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL----------TKGDA-----------EVDW 99
           +FHQLD++D+ S++SLADFIK+QFGKLDIL          T GDA           +++W
Sbjct: 60  VFHQLDVADINSIASLADFIKSQFGKLDILVNNAGVGGVKTDGDALKAAISGKEGAKINW 119

Query: 100 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EKAR 158
           S+   QT+ELA ECL+ NYYG K+  EALIPLL+LSDSPR+VN+SS +  LK +  E A+
Sbjct: 120 SEFITQTWELAEECLRINYYGAKRMAEALIPLLQLSDSPRIVNVSSSMGNLKGVSNEWAK 179

Query: 159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 218
            VLGD ENLTEER++ V+  Y +D++EG +   GW    SAY +SKA ++A+TR+LAK++
Sbjct: 180 GVLGDAENLTEERVDEVLSKYLEDFKEGSLETEGWPAMMSAYILSKAAMSAFTRVLAKKH 239

Query: 219 PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           P FCVNCVCPG+VKTDINF+ GI  VEEGAE+ V+LALLP+GGP+G FF R EE+PF
Sbjct: 240 PTFCVNCVCPGYVKTDINFNTGIRPVEEGAENVVRLALLPNGGPSGCFFDRTEESPF 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489616|ref|XP_002267348.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera] gi|297745217|emb|CBI40297.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 173/299 (57%), Positives = 222/299 (74%), Gaps = 26/299 (8%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEA  +YAVVTG+NKGIG E  RQLA+ G+ VVLTARDEKRGLEA+E LK SG+    L
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSN--L 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDA------------EV 97
           +FHQLD+ D AS+SS+ADFIK QFGKLDIL           T  DA            +V
Sbjct: 59  VFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRIASAEAVGKV 118

Query: 98  DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EK 156
           +W ++  + +EL  ECLK NYYG K+  EA IPLL+LSDSPR+VN+SS +  L+++  E 
Sbjct: 119 NWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEW 178

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
           A+AVL D ENLTEER++ V+  + KD++EG +  + W  + SAY VSKA +NAYTRILA+
Sbjct: 179 AKAVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNLSAYTVSKAALNAYTRILAR 238

Query: 217 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           +YP  C+NCVCPGFVKTD+N+++GIL++EEGAESPV+LALLPDGGP+G+FF+RKE + F
Sbjct: 239 KYPTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVSEF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800243|emb|CAN77657.1| hypothetical protein VITISV_002460 [Vitis vinifera] gi|297745213|emb|CBI40293.3| unnamed protein product [Vitis vinifera]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 175/300 (58%), Positives = 222/300 (74%), Gaps = 27/300 (9%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEATKKYAVVTG+NKGIG    R+LA+ G+TVVLTARDEKRG+EA+E LK SG+    +
Sbjct: 1   MAEATKKYAVVTGANKGIGLGICRELAANGVTVVLTARDEKRGVEALESLKGSGLSN--V 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDA-------------E 96
           +FHQLD+   AS++SLADFIKTQFGKLDIL           T  DA             E
Sbjct: 59  IFHQLDVGQPASIASLADFIKTQFGKLDILVNNAGVIGMIVTDPDALRSAIAAAQGRIGE 118

Query: 97  VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 155
           V+W+++  Q  E+A ECLK NYYG K+  EAL+PLL+LSD PR+VN+SS    L+++P E
Sbjct: 119 VNWNEIVIQPLEMAEECLKINYYGPKRMIEALMPLLQLSDLPRIVNVSSSGGKLQNIPNE 178

Query: 156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 215
            A+ VL D ENLTEE +  V+  + KD++EG +  + W    SAY+VSKA +NAYTR+LA
Sbjct: 179 WAKGVLSDAENLTEETVIEVLNQFLKDFKEGLLEAKSWPTFFSAYRVSKAALNAYTRLLA 238

Query: 216 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           K+YP FC+NCVCPG+VKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G FF+RKE + F
Sbjct: 239 KKYPTFCINCVCPGYVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGLFFVRKEVSDF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454097|ref|XP_002267820.1| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera] gi|297745218|emb|CBI40298.3| unnamed protein product [Vitis vinifera]

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/299 (57%), Positives = 221/299 (73%), Gaps = 26/299 (8%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEA  +YAVVTG+NKGIG E  RQLA+ G+ VVLTARDEKRGLEA+E LK SG+    L
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSN--L 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDA------------EV 97
           +FHQLD+ D AS+SS+ADFIK QFGKLDIL           T  DA            +V
Sbjct: 59  VFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRYASAEAVGKV 118

Query: 98  DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EK 156
           +W ++  + +EL  ECLK NYYG K+  EA IPLL+LSDSPR+VN+SS +  L+++  E 
Sbjct: 119 NWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEW 178

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
           A+AVL D ENLTEER++ V+  + KD++EG +  + W  + SAY VSKA +NAYTRILA+
Sbjct: 179 AKAVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNVSAYTVSKAALNAYTRILAR 238

Query: 217 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           + P  C+NCVCPGFVKTD+N+++GIL++EEGAESPV+LALLPDGGP+G+FF+RKE + F
Sbjct: 239 KCPTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVSEF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745216|emb|CBI40296.3| unnamed protein product [Vitis vinifera]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 168/300 (56%), Positives = 219/300 (73%), Gaps = 27/300 (9%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEAT +YAV+TG+NKGIG E  RQLA+ G+ VVLTARDEKRG+EA+E LK SG+    +
Sbjct: 1   MAEATNRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSN--V 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDA------------------------E 96
           +FHQLD+ D AS++SLADFIKTQFGKLDIL                             +
Sbjct: 59  VFHQLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGK 118

Query: 97  VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 155
           ++W ++  + +ELA EC+K NYYG K+  E LIPLL LSDSPR+VN+SS +  L+++  E
Sbjct: 119 INWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNE 178

Query: 156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 215
            A+ VL D ENLTEER++ V+  + KD++EG +  + W    SA  VSK+ +NAYTRI+A
Sbjct: 179 WAKGVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMA 238

Query: 216 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           K+YP FC+NCVCPGFVKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G+FFL+KE + F
Sbjct: 239 KKYPTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489600|ref|XP_002267232.2| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera]

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 165/299 (55%), Positives = 216/299 (72%), Gaps = 27/299 (9%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           AE   +YAV+TG+NKGIG E  RQLA+ G+ VVLTARDEKRG+EA+E LK SG+    ++
Sbjct: 243 AEYLFRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSN--VV 300

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILTKGDA------------------------EV 97
           FHQLD+ D AS++SLADFIKTQFGKLDIL                             ++
Sbjct: 301 FHQLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGKI 360

Query: 98  DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EK 156
           +W ++  + +ELA EC+K NYYG K+  E LIPLL LSDSPR+VN+SS +  L+++  E 
Sbjct: 361 NWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEW 420

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
           A+ VL D ENLTEER++ V+  + KD++EG +  + W    SA  VSK+ +NAYTRI+AK
Sbjct: 421 AKGVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMAK 480

Query: 217 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           +YP FC+NCVCPGFVKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G+FFL+KE + F
Sbjct: 481 KYPTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 539

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530092|ref|XP_003533618.1| PREDICTED: (+)-neomenthol dehydrogenase-like [Glycine max]

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 165/295 (55%), Positives = 219/295 (74%), Gaps = 21/295 (7%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E  K+YAVVTG+NKGIGF   ++LAS GI VVLTARDEK G +AVEKLK  G+  +LL
Sbjct: 1   MGEEAKRYAVVTGANKGIGFGMCKKLASSGIVVVLTARDEKNGFKAVEKLKEFGLS-DLL 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDA-------------------EVDWSK 101
           +FHQLD+ D ASVS+LADFIKT+FGKLDIL    A                   ++DW++
Sbjct: 60  VFHQLDVDDPASVSALADFIKTEFGKLDILVNNAAVTGGKLLDADAFLRKRNGEQIDWNE 119

Query: 102 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EKARAV 160
           V Y+TYELA +C++TN+YG K+  EAL+PLL+LS SPR+VN+SS     K++P E AR +
Sbjct: 120 VGYETYELAEQCVETNFYGVKRVTEALLPLLQLSTSPRIVNISSRAGLFKNIPNEWARTM 179

Query: 161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 220
           L D+ENLT E+I+ V++++ KD++EG +  +GW   +SAY +SKA +NAYTRI+AK+YP+
Sbjct: 180 LSDIENLTREKIDGVLEEFQKDFKEGSLEIKGWPAFASAYTMSKAALNAYTRIMAKKYPR 239

Query: 221 FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           F +N VCPGFVKTD+N + G LS++EGAE+PV LALLP+GGP+G FF + E  PF
Sbjct: 240 FHINSVCPGFVKTDMNNNTGQLSIDEGAETPVLLALLPNGGPSGCFFHQGEVIPF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745219|emb|CBI40299.3| unnamed protein product [Vitis vinifera]

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/304 (54%), Positives = 208/304 (68%), Gaps = 31/304 (10%)

Query: 1   MAEATK-----KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV 55
           MAEA       + AVVTG+NKG+G E  RQLA+ G+ VVLTARDEKRG+EA++ L  SG+
Sbjct: 1   MAEAITSVLNFRSAVVTGANKGMGLEICRQLAASGVRVVLTARDEKRGVEALQSLNGSGL 60

Query: 56  DPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDA-------------------- 95
               L+FHQLD+ D AS++S ADFIKTQFGKLDIL                         
Sbjct: 61  SN--LVFHQLDVGDPASIASFADFIKTQFGKLDILVNNAGMSGSIVKDPVALESGVAATE 118

Query: 96  ---EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 152
              +V+W  +  Q  ELA EC+K NYYG K+  EA IPLL+LSDSPR+VN+SS +  L++
Sbjct: 119 IREQVNWHGIMTQPLELAEECVKINYYGPKRMAEAFIPLLQLSDSPRIVNVSSSLGKLQN 178

Query: 153 LP-EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 211
           +  E A+AVL D ENLTEER++ V+  + KD+EEG +  + W    +AY VSKA +NAYT
Sbjct: 179 VTNEWAKAVLSDAENLTEERVDEVLNQFLKDFEEGLLEAKNWSAFYAAYTVSKAALNAYT 238

Query: 212 RILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE 271
           RILA +YP FC+NCVCPG+VKTD N + GIL+VEEGAE PVKLALLPDGGP+G FF RKE
Sbjct: 239 RILATKYPAFCINCVCPGYVKTDFNDNIGILTVEEGAECPVKLALLPDGGPSGHFFSRKE 298

Query: 272 EAPF 275
              F
Sbjct: 299 VTEF 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566889|ref|XP_003551658.1| PREDICTED: LOW QUALITY PROTEIN: (+)-neomenthol dehydrogenase-like [Glycine max]

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 167/297 (56%), Positives = 210/297 (70%), Gaps = 25/297 (8%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           A +  + AVVTG+NKGIGF   +QL S GITVVLTARDEKRGLEAVEKLK  GV  +++ 
Sbjct: 234 AASVVRNAVVTGANKGIGFGICKQLVSNGITVVLTARDEKRGLEAVEKLKEFGVSDQVV- 292

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILTKGD---------------------AEVDWS 100
           FHQLD++D  S+ SLA+FIKTQFGKLDIL                         A VDW 
Sbjct: 293 FHQLDVTDPKSIESLANFIKTQFGKLDILVNNAGIHGAYVDRDALAAAGSSEKVANVDWR 352

Query: 101 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK-ARA 159
           K+  + +E A   ++TNYYG K  CEALIPLLELS +PR+VN+SS +  L+ +P   AR 
Sbjct: 353 KISTENFEAAEAGIRTNYYGVKLMCEALIPLLELSGTPRIVNVSSSMGKLEKIPNAWARG 412

Query: 160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAKRY 218
            L D E+LTEE+++ V+  + KD++EG +  +GW PH+ SAY VSKA + AYTRILAK+Y
Sbjct: 413 ALSDAESLTEEKVDEVLNQFLKDFKEGSLETKGW-PHAFSAYIVSKAALTAYTRILAKKY 471

Query: 219 PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           P FC+N VCPGFVKTD+N++ G LSV+EGAES V+LALLP+GGP+G FF R E APF
Sbjct: 472 PSFCINAVCPGFVKTDLNYNTGYLSVDEGAESVVRLALLPNGGPSGLFFSRSEVAPF 528

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520438|ref|XP_003528869.1| PREDICTED: (+)-neomenthol dehydrogenase-like [Glycine max]

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 160/299 (53%), Positives = 213/299 (71%), Gaps = 25/299 (8%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E T++YAVVTG+NKGIG E VRQLAS GI VVLTAR+E+RG++A++ LK SG+   L+
Sbjct: 1   MGETTERYAVVTGANKGIGLEIVRQLASAGIKVVLTARNEERGIQALQTLKDSGLS-HLV 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILT----------------------KGDAEVD 98
           LFHQ+D++D  SV+SLADFIK++FGKLDIL                       +G    D
Sbjct: 60  LFHQVDVADATSVASLADFIKSKFGKLDILVNNAGILGAVIKDTDSFTSLLLKRGATPED 119

Query: 99  WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK-- 156
            +K   Q+YELA ECL+ NYYG K T E+L+PLL+LSDSPR+VN+SS +  L+ LP+   
Sbjct: 120 GTKAITQSYELAKECLQINYYGAKTTVESLLPLLQLSDSPRIVNVSSTMGQLESLPKGSW 179

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
           AR V  D   +TEE+++ ++K + +D++EG + + GW  H  AY VSKA +NAYTRILAK
Sbjct: 180 AREVFSDANIITEEKVDEILKKFLRDFQEGSLESNGWPRHLGAYIVSKAAMNAYTRILAK 239

Query: 217 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
           +YP FC+N VCPG+VKTDI  + G+L+VEEGA SPV+LALLP+G P+G F+ R + A F
Sbjct: 240 KYPSFCINSVCPGYVKTDITSNTGLLTVEEGAASPVRLALLPNGSPSGLFYYRSDVASF 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
TAIR|locus:2198230	295	AT1G01800 [Arabidopsis thalian	0.676	0.630	0.534	4.6e-76
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.727	0.636	0.5	5.9e-74
TAIR|locus:2157408	314	AT5G51030 [Arabidopsis thalian	0.952	0.834	0.435	5.1e-51
RGD|2286	277	Cbr1 "carbonyl reductase 1" [R	0.934	0.927	0.403	3.6e-41
MGI|MGI:88284	277	Cbr1 "carbonyl reductase 1" [M	0.938	0.931	0.408	9.6e-41
TAIR|locus:2159188	316	AT5G61830 [Arabidopsis thalian	0.963	0.838	0.389	2e-40
TAIR|locus:2097508	302	AT3G59710 [Arabidopsis thalian	0.930	0.847	0.388	3.3e-40
UNIPROTKB|J9P7P2	277	CBR1 "Uncharacterized protein"	0.938	0.931	0.395	5.3e-40
UNIPROTKB|Q3SZD7	277	CBR1 "Carbonyl reductase [NADP	0.92	0.913	0.390	8.7e-40
RGD|2321756	277	LOC100360601 "carbonyl reducta	0.927	0.920	0.402	8.7e-40

TAIR|locus:2198230 AT1G01800 [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
 Identities = 100/187 (53%), Positives = 135/187 (72%)

Query:    90 LTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA 149
             + +  A  D SK+   TYE+  EC+KTNYYG K+ CEA+IPLL+ SDSPR+V+++S +  
Sbjct:   109 IAEAGAPTDISKIMSDTYEIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGK 168

Query:   150 LKDLP-EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN 208
             L+++  E A+ VL D ENLTEE+I+ V+ +Y KDY+EG +  +GW    S Y +SKA + 
Sbjct:   169 LENVSNEWAKGVLSDAENLTEEKIDEVINEYLKDYKEGALQVKGWPTVMSGYILSKAAVI 228

Query:   209 AYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFL 268
             A TR+LAKR+  F +N VCPGFV T+INF+ GILSVEEGA SPVKLAL+P+G P+G FF 
Sbjct:   229 ALTRVLAKRHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPNGDPSGLFFD 288

Query:   269 RKEEAPF 275
             R   + F
Sbjct:   289 RANVSNF 295

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 486 (176.1 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
 Identities = 103/206 (50%), Positives = 136/206 (66%)

Query:    70 LASVSSLADFIKTQFGKLDILTKGDAEVDWSKV-----CYQTYELAVECLKTNYYGTKQT 124
             +  VS   ++I+  F  L  L  G  E    K        + +E A +C+ TNYYG K+ 
Sbjct:   102 VGDVSVFNEYIEADFKALQALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRL 161

Query:   125 CEALIPLLELSDSPRLVNLSSYVSALKDL-PEKARAVLGDVENLTEERIEMVVKDYFKDY 183
              +ALIPLL+LS SPR+VN+SS   +L  L  E A+ VLGD + LTEER++ VV+ + KD 
Sbjct:   162 TQALIPLLQLSPSPRIVNVSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDI 221

Query:   184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILS 243
             +EG++    W PH +A +VSKA +NAYT+I AK+YP F +N +CPG+ KTDI FHAG LS
Sbjct:   222 KEGKLEESQWPPHFAAERVSKAALNAYTKIAAKKYPSFRINAICPGYAKTDITFHAGPLS 281

Query:   244 VEEGAESPVKLALLPDGGPTGRFFLR 269
             V E A+ PVKLALLPDGGP+G FF R
Sbjct:   282 VAEAAQVPVKLALLPDGGPSGCFFPR 307

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2157408 AT5G51030 [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 122/280 (43%), Positives = 174/280 (62%)

Query:     9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             AVVTG+N+GIGFE VRQLA  G+TV+LT+RDE  G+EA + L+  G + +   FH+LDI 
Sbjct:    40 AVVTGANRGIGFEMVRQLAGHGLTVILTSRDENVGVEAAKILQEGGFNVD---FHRLDIL 96

Query:    69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
             D +S+    ++IK ++G +D+L   +A V+++     + E +   + TNYYGTK    A+
Sbjct:    97 DSSSIQEFCEWIKEKYGFIDVLIN-NAGVNYNVGSDNSVEFSHMVISTNYYGTKNIINAM 155

Query:   129 IPLLELS-DSPRLVNLSSYVSALKDLPEK-----ARAVLGDVENLTEERIEMVVKDYFKD 182
             IPL+  +    R+VN++S +  LK    K      RA L DV++LTEE ++  V ++ K 
Sbjct:   156 IPLMRHACQGARIVNVTSRLGRLKGRHSKLENEDVRAKLMDVDSLTEEIVDKTVSEFLKQ 215

Query:   183 YEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAKRY---P---KFCVNCVCPGFVKTDI 235
              EEG   + GW PHS + Y VSK  +NAYTR+LAK     P   K   NC CPG+VKT +
Sbjct:   216 VEEGTWESGGW-PHSFTDYSVSKMAVNAYTRVLAKELSERPEGEKIYANCFCPGWVKTAM 274

Query:   236 NFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
               +AG +S E+GA++ V LALLPD   TG+FF  + E  F
Sbjct:   275 TGYAGNVSAEDGADTGVWLALLPDQAITGKFFAERREISF 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 113/280 (40%), Positives = 166/280 (59%)

Query:     9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
             A+VTG+NKGIGF  VR L  K +  VVLTARDE RG EAV++L+  G+ P    FHQLDI
Sbjct:     8 ALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPR---FHQLDI 64

Query:    68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
              +  S+ +L DF+  ++G L++L   +A + +  V    + +  E  +KTN++GT+  C+
Sbjct:    65 DNPQSIRALRDFLLQEYGGLNVLVN-NAGIAFKVVDPTPFHIQAEVTMKTNFFGTQDVCK 123

Query:   127 ALIPLLELSDSPRLVNLSSYVS--ALKDL-PEKARAVLGDVENLTEERIEMVVKDYFKDY 183
              L+P+++     R+VN+SS VS  ALK   PE  +      E +TEE +  ++  + +D 
Sbjct:   124 ELLPIIK--PQGRVVNVSSSVSLRALKSCSPELQQKFRS--ETITEEELVGLMNKFIEDA 179

Query:   184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCPGFVKTDINF 237
             ++G  A  GW P+S AY V+K  +   +RI A+      R  K  +N  CPG+V+TD+  
Sbjct:   180 KKGVHAKEGW-PNS-AYGVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRTDMAG 237

Query:   238 HAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF 275
                  S EEGAE+PV LALLP G  GP G+F   K+  P+
Sbjct:   238 PKATKSPEEGAETPVYLALLPPGAEGPHGQFVQDKKVEPW 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEP

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO;ISS

GO:0018205 "peptidyl-lysine modification" evidence=NAS

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0034698 "response to gonadotropin stimulus" evidence=IEP

GO:0042373 "vitamin K metabolic process" evidence=ISO;ISS

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 118/289 (40%), Positives = 173/289 (59%)

Query:     4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
             +++  A+VTG+NKGIGF   R L  K    VVL ARDE+RG  AV+KL+A G+ P    F
Sbjct:     3 SSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPR---F 59

Query:    63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT-YELAVEC-LKTNYYG 120
             HQLDI +  S+ +L DF+  ++G LD+L   +A + + KV   T + +  E  +KTN++G
Sbjct:    60 HQLDIDNPQSIRALRDFLLKEYGGLDVLVN-NAGIAF-KVNDDTPFHIQAEVTMKTNFFG 117

Query:   121 TKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEM 174
             T+  C+ L+PL++     R+VN+SS VS  ALK    +L +K R+     E +TEE +  
Sbjct:   118 TRDVCKELLPLIK--PQGRVVNVSSMVSLRALKNCRLELQQKFRS-----ETITEEELVG 170

Query:   175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCP 228
             ++  + +D ++G  A  GW P+S AY V+K  +   +RILA+      R  K  +N  CP
Sbjct:   171 LMNKFVEDTKKGVHAEEGW-PNS-AYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCP 228

Query:   229 GFVKTDINFHAGILSVEEGAESPVKLALLP-DG-GPTGRFFLRKEEAPF 275
             G+V+TD+       S EEGAE+PV LALLP D  GP G+F   K+  P+
Sbjct:   229 GWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEPW 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005902 "microvillus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO

GO:0042373 "vitamin K metabolic process" evidence=ISO

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;TAS

TAIR|locus:2159188 AT5G61830 [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 109/280 (38%), Positives = 157/280 (56%)

Query:     9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             AVVTGSN+GIGFE  RQLA  G+TVVLTAR+   GLEAV+ L+      ++  FHQLD++
Sbjct:    39 AVVTGSNRGIGFEIARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGLKVY-FHQLDVT 97

Query:    69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
             D +S+     ++K  FG LDIL   +A V+++     T E A   + TNY GTK   +A+
Sbjct:    98 DSSSIREFGCWLKQTFGGLDILVN-NAGVNYNLGSDNTVEFAETVISTNYQGTKNMTKAM 156

Query:   129 IPLLELSD-SPRLVNLSSYVSALKDLPEKARAV-----LGDVENLTEERIEMVVKDYFKD 182
             IPL+  S    R+VN+SS +  +     +   V     L   + LTEE I+  V  +   
Sbjct:   157 IPLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRDQLSSPDLLTEELIDRTVSKFINQ 216

Query:   183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTDIN 236
              ++G   + GW    + Y +SK  +NAYTR++AK         K  VN  CPG+VKT + 
Sbjct:   217 VKDGTWESGGWPQTFTDYSMSKLAVNAYTRLMAKELERRGEEEKIYVNSFCPGWVKTAMT 276

Query:   237 FHAGILSVEEGAESPVKLAL-LPDGGPTGRFFLRKEEAPF 275
              +AG +  E+ A++ V L+L L +   TG+FF  + E  F
Sbjct:   277 GYAGNMPPEDAADTGVWLSLVLSEEAVTGKFFAERREINF 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2097508 AT3G59710 [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 103/265 (38%), Positives = 154/265 (58%)

Query:     9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             AVVTG+NKGIGF  V++L   G+TVVLTAR+ + G +A E L+  G     + F  LDIS
Sbjct:    31 AVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGN--VHFCCLDIS 88

Query:    69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
             D +S+++ A +     G LDIL   +A V ++ V     +     +KTN+YG K   EAL
Sbjct:    89 DPSSIAAFASWFGRNLGILDILVN-NAAVSFNAVGENLIKEPETIIKTNFYGAKLLTEAL 147

Query:   129 IPLLELSDS-PRLVNLSSYVSALKDLPEKA-RAVLGDVENLTEERIEMVVKDYFKDYEEG 186
             +PL   S S  R++N+SS +  L  L   + R +L + E+LT E+I+  +  + +D + G
Sbjct:   148 LPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRIL-ESEDLTNEQIDATLTQFLQDVKSG 206

Query:   187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDINFHAGILSV 244
                 +GW  +   Y +SK  +NAY+R+LA+RY   K  VNC+CPGF +T +    G  + 
Sbjct:   207 TWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTA 266

Query:   245 EEGAESPVKLALLP-DGGPTGRFFL 268
             +E A    KL LLP +   TG+F++
Sbjct:   267 DEAAAIVAKLVLLPPEKLATGKFYI 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|J9P7P2 CBR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 111/281 (39%), Positives = 162/281 (57%)

Query:     4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
             A  + A+VTG+NKGIGF   R+L  +    VVLTARDE RG  AV++L+A G+ P    F
Sbjct:     3 AASRVALVTGANKGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEGLSPR---F 59

Query:    63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGT 121
             H LDI DL S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT
Sbjct:    60 HLLDIDDLQSIRALRDFLRKEYGGLDVLVN-NAGIAFKTNDPTPFHIQAEVTMKTNFFGT 118

Query:   122 KQTCEALIPLLELSDSPRLVNLSSYVS--ALKDL-PEKARAVLGDVENLTEERIEMVVKD 178
             +  C  L+PL++     R+VN+SS VS  ALK   PE  +      E +TEE +  ++  
Sbjct:   119 RDVCTELLPLMK--PQGRVVNVSSVVSVRALKSCSPELQQKFRS--EAITEEELVGLMNK 174

Query:   179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCPGFVK 232
             + +D ++G   N GW P  +AY V+K  +   +RI A+      R  K  +N  CPG+V+
Sbjct:   175 FVEDTKKGVHRNEGW-P-DNAYGVTKIGVTVLSRIHARKLSEQRRDDKILLNACCPGWVR 232

Query:   233 TDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKE 271
             TD+       S EEGAE+PV LALLP    GP G F + K+
Sbjct:   233 TDMAGPRAPKSPEEGAETPVYLALLPSDAEGPHGEFLMEKK 273

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3SZD7 CBR1 "Carbonyl reductase [NADPH] 1" [Bos taurus (taxid:9913)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 107/274 (39%), Positives = 157/274 (57%)

Query:     9 AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
             A+VTG+NKGIGF  VR L  +    VVLTARDE RG  AV++L+A G+ P   LFHQLDI
Sbjct:     8 ALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSP---LFHQLDI 64

Query:    68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
              D  S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT+  C 
Sbjct:    65 DDRQSIRALRDFLRKEYGGLDVLVN-NAGIAFKTADTTPFHIQAEVTMKTNFFGTRDVCT 123

Query:   127 ALIPLLELSDSPRLVNLSSYVS--ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
              L+PL++     R+VN+SS+VS  +LK    + +      E +TEE +  ++  + +D +
Sbjct:   124 ELLPLIK--PQGRVVNVSSFVSVNSLKKCSRELQQKFRS-ETITEEELVGLMNKFVEDTK 180

Query:   185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTDINFH 238
              G     GW P  +AY V+K  +   +RI A++        K  +N  CPG+V+TD+   
Sbjct:   181 NGVHRKEGW-P-DTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGP 238

Query:   239 AGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 270
                 S EEGAE+PV LALLP    GP G F   K
Sbjct:   239 KASKSPEEGAETPVYLALLPSDAEGPHGEFISEK 272

GO:0042373 "vitamin K metabolic process" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2321756 LOC100360601 "carbonyl reductase 2-like" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 112/278 (40%), Positives = 161/278 (57%)

Query:     7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             + A+VTG+NKGIGF   R L  K  G  VVLTARDE RG  AV++L+A G+ P    FHQ
Sbjct:     6 RVALVTGANKGIGFAITRDLCRKFPG-DVVLTARDEARGRAAVQQLQAEGLSPR---FHQ 61

Query:    65 LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQ 123
             LDI +  S+ +L DF++ ++G LD+L   +A +         + +  E  +KTN++GT+ 
Sbjct:    62 LDIDNPQSICALRDFLRKEYGGLDVLVN-NAGIGSKCTDLNHFHIQREAAMKTNFFGTQA 120

Query:   124 TCEALIPLLELSDSPRLVNLSSYVS--ALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
              C  L+PL++     R+VN+SS +S  ALK+   + R      E +TEE +  ++  + +
Sbjct:   121 VCTELLPLIKTQG--RVVNVSSLISLEALKNCSPELRQKFRS-ETITEEELVGLMNKFVE 177

Query:   182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNCVCPGFVKTDI 235
             D +EG     GW P+S AY VSK  +   +RI A+      R  K  +N  CPG+V+TD+
Sbjct:   178 DAKEGVHEKEGW-PNS-AYAVSKIGVTVLSRIYARKLNEERRGDKILLNACCPGWVRTDM 235

Query:   236 NFHAGILSVEEGAESPVKLALL-PDG-GPTGRFFLRKE 271
                    S EEGAE+PV LALL PD  GP G+F   K+
Sbjct:   236 AGPKATKSPEEGAETPVYLALLTPDAEGPHGQFVQDKK 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16152	CBR1_HUMAN	1, ., 1, ., 1, ., 1, 8, 9	0.3920	0.9054	0.8989	yes	no
Q6WAU1	IPIPR_MENPI	1, ., 3, ., 1, ., 8, 2	0.5064	0.9745	0.8535	N/A	no
P47727	CBR1_RAT	1, ., 1, ., 1, ., 1, 8, 9	0.3802	0.9418	0.9350	yes	no
Q9M2E2	SDR1_ARATH	1, ., 1, ., 1, ., 2, 0, 8	0.5675	1.0	0.9290	yes	no
Q5RCU5	CBR1_PONAB	1, ., 1, ., 1, ., 1, 8, 9	0.3884	0.9054	0.8989	yes	no
B2X050	MNR1_CAPAN	1, ., 1, ., 1, ., 2, 0, 8	0.5031	1.0	0.8757	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	275
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-84
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-35
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-31
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-25
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-25
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	7e-24
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-21
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-20
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-19
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	9e-19
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-18
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-18
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-16
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-16
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	4e-16
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-16
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	8e-16
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	7e-15
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-14
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-14
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	7e-14
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-14
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-14
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-13
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	3e-13
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-13
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-13
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-13
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	3e-13
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	8e-13
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-13
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-13
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-12
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-12
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-12
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-12
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-12
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-12
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	5e-12
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	8e-12
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	8e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	9e-12
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-11
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-11
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-11
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-11
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-11
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-11
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	6e-11
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-11
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-11
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-11
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-11
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-10
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-10
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-10
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-10
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-10
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-10
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	4e-10
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-10
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	8e-10
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-09
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-09
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-09
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-09
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-09
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-09
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-09
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-09
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-09
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-09
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-09
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-09
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	4e-09
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-09
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	5e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	6e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-09
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-09
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	7e-09
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	7e-09
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-09
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	9e-09
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-08
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-08
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-08
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-08
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-08
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-08
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-08
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-08
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	4e-08
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-08
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-08
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	5e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	5e-08
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	5e-08
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-08
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	6e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-08
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	8e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-07
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-07
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-07
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-07
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-07
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	5e-07
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-07
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-07
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-07
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	7e-07
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	7e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	8e-07
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	8e-07
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	9e-07
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-06
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-06
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-06
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-06
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-06
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	3e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-06
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-06
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	4e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	4e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-06
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	6e-06
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-06
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	6e-06
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	7e-06
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	9e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-05
pfam08659	181	pfam08659, KR, KR domain	1e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-05
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-05
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-05
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-05
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-05
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-05
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-05
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-05
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	6e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-05
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-04
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-04
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-04
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-04
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-04
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-04
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-04
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-04
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-04
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-04
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-04
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-04
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-04
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-04
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	5e-04
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	5e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	6e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-04
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	7e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-04
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-04
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	8e-04
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	0.001
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	0.001
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	0.001
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.001
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	0.002
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.002
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	0.002
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	0.003
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	0.003
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	0.003
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	0.003

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  251 bits (643), Expect = 3e-84
 Identities = 116/278 (41%), Positives = 152/278 (54%), Gaps = 62/278 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+N+GIGFE VRQLA  G  TV+LTARD +RG  AVEKL+A G+      FHQL
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVR---FHQL 57

Query: 66  DISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           D++D AS+ + ADF++ ++G LDIL            D +     T E A E +KTN++G
Sbjct: 58  DVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDST----PTREQARETMKTNFFG 113

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
           T    +AL+PLL+ S + R+VN+SS + +L                              
Sbjct: 114 TVDVTQALLPLLKKSPAGRIVNVSSGLGSL------------------------------ 143

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH 238
                           +SAY VSKA +NA TRILAK        VN  CPG+VKTD+   
Sbjct: 144 ----------------TSAYGVSKAALNALTRILAKELKETGIKVNACCPGWVKTDMGGG 187

Query: 239 AGILSVEEGAESPVKLALLP-DGGPTGRFFLRKEEAPF 275
               + EEGAE+PV LALLP DG PTG+FF  K+  P+
Sbjct: 188 KAPKTPEEGAETPVYLALLPPDGEPTGKFFSDKKVVPW 225

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  126 bits (319), Expect = 4e-35
 Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 65/287 (22%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K  V+TG+N GIG ET R+LA +G  V++  R+E++G EA  ++K        +   QL
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKET-GNAKVEVIQL 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVC--------YQTYELAVEC-LKT 116
           D+S LASV   A+    +F +LDIL           +          +  +   E     
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDIL-----------INNAGIMAPPRRLTKDGFELQFAV 108

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           NY G       L+P+L+ S   R+VN+SS       +                     + 
Sbjct: 109 NYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPID-----------------FNDLD 151

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD 234
            +  K+Y   +           AY  SK     +TR LA+R       VN + PG V+T+
Sbjct: 152 LENNKEYSPYK-----------AYGQSKLANILFTRELARRLEGTGVTVNALHPGVVRTE 200

Query: 235 INFHAGIL-------------SVEEGAESPVKLALLPD-GGPTGRFF 267
           +    G               S E+GA++ +  A  P+  G +G++F
Sbjct: 201 LLRRNGSFFLLYKLLRPFLKKSPEQGAQTALYAATSPELEGVSGKYF 247

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  115 bits (289), Expect = 6e-31
 Identities = 75/289 (25%), Positives = 109/289 (37%), Gaps = 88/289 (30%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG++ GIG    R+LA +G  VVL  R+E+  L  +  ++A G +    +  Q D+S
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEA-LAELAAIEALGGN---AVAVQADVS 56

Query: 69  DLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVECLKT 116
           D   V +L +    +FG+LDIL             +   E DW +V           L  
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDE-DWDRV-----------LDV 104

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N  G      A +P ++     R+VN+SS V+ L+ L                       
Sbjct: 105 NLTGVFLLTRAALPHMKKQGGGRIVNISS-VAGLRPL----------------------- 140

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                             P  +AY  SKA +   TR LA     +   VN V PG V T 
Sbjct: 141 ------------------PGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLVDTP 182

Query: 235 INFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFF 267
           +    G                + + EE AE+ V LA       TG+  
Sbjct: 183 MLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVI 231

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  100 bits (252), Expect = 2e-25
 Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 69/245 (28%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VTG+++GIG     +LA+ G  VV+   +E+       +L+A+G +  +L    
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVL---V 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVEC 113
            D+SD A+V +L +     FG LDIL        DA +      DW +V      + V  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRV------IDV-N 113

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           L   +   +    A +P +  +   R+VN+SS                            
Sbjct: 114 LTGTFNVVR----AALPPMIKARYGRIVNISSVS-------------------------- 143

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                       G   N G     + Y  +KA +  +T+ LA         VN V PGF+
Sbjct: 144 ------------GVTGNPGQ----TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFI 187

Query: 232 KTDIN 236
            TD+ 
Sbjct: 188 DTDMT 192

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 99.9 bits (249), Expect = 4e-25
 Identities = 66/273 (24%), Positives = 96/273 (35%), Gaps = 70/273 (25%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR--DEKRGLEAVEKLKASGVDPELLLF 62
           + K A+VTG++ GIG    R LA +G  VV+ AR  +E+        +K +G        
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR--AAA 61

Query: 63  HQLDISD-LASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVECLK 115
              D+SD   SV +L    + +FG++DIL         DA ++       T E     + 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEE-----LTEEDWDRVID 116

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N  G      A +P   L    R+VN+SS                              
Sbjct: 117 VNLLGAFLLTRAALP---LMKKQRIVNISS------------------------------ 143

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
                       +A  G  P  +AY  SKA +   T+ LA         VN V PG++ T
Sbjct: 144 ------------VAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT 191

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            +            +     L  L    P GR 
Sbjct: 192 PMTAAL-------ESAELEALKRLAARIPLGRL 217

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 96.5 bits (241), Expect = 7e-24
 Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 71/243 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG     +LA++G  V +T R E+   E VE++KA G +       + D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGN---AAALEAD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           +SD  +V +L + ++ +FG +DIL      T+ D       E DW  V           +
Sbjct: 58  VSDREAVEALVEKVEAEFGPVDILVNNAGITR-DNLLMRMSEEDWDAV-----------I 105

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N  G     +A+I  +    S R++N+SS V                           
Sbjct: 106 NVNLTGVFNVTQAVIRAMIKRRSGRIINISSVV--------------------------- 138

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G I N G     + Y  SKA +  +T+ LAK        VN V PGF+ 
Sbjct: 139 -----------GLIGNPG----QANYAASKAGVIGFTKSLAKELASRGITVNAVAPGFID 183

Query: 233 TDI 235
           TD+
Sbjct: 184 TDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 66/244 (27%), Positives = 97/244 (39%), Gaps = 70/244 (28%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K A+VTG+++GIG     +LA++G  VV+     + G EA V ++ A G      L  
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK---ALAV 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYELAVE 112
           Q D+SD  SV    D  K +FG +DIL      T+ +      E DW +V          
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV---------- 110

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            + TN  G     +A+   +    S R++N+SS V                         
Sbjct: 111 -IDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV------------------------- 144

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                        G + N G       Y  SKA +  +T+ LA+        VN V PGF
Sbjct: 145 -------------GLMGNPGQA----NYAASKAGVIGFTKSLARELASRGITVNAVAPGF 187

Query: 231 VKTD 234
           ++TD
Sbjct: 188 IETD 191

Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 57/247 (23%), Positives = 77/247 (31%), Gaps = 69/247 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
            +    K A+VTG+ +G+G      LA  G TV           E    L+A+G      
Sbjct: 2   ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR---A 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL--------TKGDAEVD---WSKVCYQTYEL 109
                D++D ASV    D      G LD L        +K   E+D   W  V       
Sbjct: 59  HAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAV------- 111

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
               +  N  GT     A +P L  S   R+VNL+S  +                     
Sbjct: 112 ----MNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG------------------ 149

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVC 227
                                    P   AY  SK  +   TR LA+        VN + 
Sbjct: 150 ------------------------APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIA 185

Query: 228 PGFVKTD 234
           PG   T+
Sbjct: 186 PGLTATE 192

Length = 250

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 59/271 (21%)

Query: 9   AVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
            ++TG+++GIG E VRQL ++G  TV+ T RD      A  +L A G     L   +LD+
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDP----SAATELAALGASHSRLHILELDV 56

Query: 68  SDL--ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC--LKTNYYGTKQ 123
           +D    S  ++A   +     LD+L   +A +  S       +        + N  G   
Sbjct: 57  TDEIAESAEAVA--ERLGDAGLDVLIN-NAGILHSYGPASEVDSEDLLEVFQVNVLGPLL 113

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A +PLL      +++N+SS V ++ D                               
Sbjct: 114 LTQAFLPLLLKGARAKIINISSRVGSIGDNTSG--------------------------- 146

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILA---KRYPKFCVNCVCPGFVKTDI--NFH 238
                   GW     +Y+ SKA +N  T+ LA   KR     V+ + PG+V+TD+   F 
Sbjct: 147 --------GW----YSYRASKAALNMLTKSLAVELKRDGITVVS-LHPGWVRTDMGGPFA 193

Query: 239 A--GILSVEEGAESPVKLALLPDGGPTGRFF 267
              G ++ EE     +K+    +   +G+F 
Sbjct: 194 KNKGPITPEESVAGLLKVIDNLNEEDSGKFL 224

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 57/254 (22%), Positives = 96/254 (37%), Gaps = 64/254 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + GIG      LA++G  V+ TAR+    LE++ +L    ++       +LD
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARN-PDKLESLGELLNDNLEVL-----ELD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
           ++D  S+ +    +  +FG++D+L         G  E         + E   E  + N +
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLE-------ETSIEEVRELFEVNVF 107

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
           G  +   A +PL+    S R+VN+SS V+ L   P                         
Sbjct: 108 GPLRVTRAFLPLMRKQGSGRIVNVSS-VAGLVPTPFL----------------------- 143

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVC--PGFVKTDINF 237
                               Y  SKA + A +  L      F +      PG V+T    
Sbjct: 144 ------------------GPYCASKAALEALSESLRLELAPFGIKVTIIEPGPVRTGFAD 185

Query: 238 HAGILSVEEGAESP 251
           +A   ++E+   SP
Sbjct: 186 NAAGSALEDPEISP 199

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 83.5 bits (207), Expect = 9e-19
 Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 19/145 (13%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           AVVTG+N G+G+ET   LA+KG  VVL  R+  +G  A  ++ A+    ++ L  +LD++
Sbjct: 19  AVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTL-QELDLT 77

Query: 69  DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT----YELAVECLKTNYYG---- 120
            LASV + AD ++  + ++D+L   +A V ++    QT    +EL      TN+ G    
Sbjct: 78  SLASVRAAADALRAAYPRIDLLIN-NAGVMYTP--KQTTADGFELQ---FGTNHLGHFAL 131

Query: 121 TKQTCEALIPLLELSDSPRLVNLSS 145
           T    + L+P+       R+V +SS
Sbjct: 132 TGLLLDRLLPV----PGSRVVTVSS 152

Length = 306

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 66/241 (27%), Positives = 99/241 (41%), Gaps = 72/241 (29%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG+++GIG     +LA +G  V++T    E+   E VE+LKA GV     L    D+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---ALGVVCDV 57

Query: 68  SDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECLK 115
           SD   V ++ + I+ + G +DIL      T+ D       E DW  V           + 
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGITR-DNLLMRMKEEDWDAV-----------ID 105

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
           TN  G     +A++ ++    S R++N+SS V                            
Sbjct: 106 TNLTGVFNLTQAVLRIMIKQRSGRIINISSVV---------------------------- 137

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
                     G + N G     + Y  SKA +  +T+ LAK        VN V PGF+ T
Sbjct: 138 ----------GLMGNAG----QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDT 183

Query: 234 D 234
           D
Sbjct: 184 D 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 65/244 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---TARDEKRGLEAVEKLKASGVDPELLLFH 63
           K A+VTG+++GIG    ++LA  G +VV+   +++      E V +++A+G     +   
Sbjct: 4   KVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAE--EVVAEIEAAGGKAIAV--- 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYEL-----AVECLKTNY 118
           Q D+SD + V+ L D  +  FG +DIL      +    +   + E       V   K  +
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNT-KGAF 117

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
           +  ++          L D  R++N+SS ++A                             
Sbjct: 118 FVLQEA------AKRLRDGGRIINISSSLTAAY--------------------------- 144

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFVKTDIN 236
                           P+  AY  SKA + A+TR+LAK        VN V PG V TD+ 
Sbjct: 145 ---------------TPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDM- 188

Query: 237 FHAG 240
           F+AG
Sbjct: 189 FYAG 192

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 48/231 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG+ +G+G     +LA  G  VV+  R DE+   E VE ++A G         Q 
Sbjct: 7   RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR---AQAVQA 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D++D A++ +       +FG++DIL       +   +   + +   E +  N  G     
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
            A++P +      R+VN+SS V+ L                                   
Sbjct: 124 RAVVPPMRKQRGGRIVNISS-VAGLP---------------------------------- 148

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                 GW P  S Y  +KA +   T+ LA+   ++   VN V PG + TD
Sbjct: 149 ------GW-PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 31/158 (19%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPEL 59
           M     K A++TG++ GIG  T R LA  G  VVL AR E+R LEA+ +++ A       
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER-LEALADEIGAGAALA-- 57

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTY 107
                LD++D A+V +  + +  +FG++DIL             + D + DW ++     
Sbjct: 58  ---LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLD-DWDRM----- 108

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
                 + TN  G      A++P +    S  ++NL S
Sbjct: 109 ------IDTNVKGLLNGTRAVLPGMVERKSGHIINLGS 140

Length = 246

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 66/247 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK--LKASGVDPE 58
                 K A++TG++ GIG E  +QLA +G  ++L AR E + LEA+ K     +GV+ E
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK-LEALAKELEDKTGVEVE 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNY 118
                  D+SD  ++  L D +K + G +D+L                    V       
Sbjct: 60  ---VIPADLSDPEALERLEDELKERGGPIDVL--------------------VNNAGFGT 96

Query: 119 YGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           +G         P LELS      ++ L+  + AL  L    +AVL               
Sbjct: 97  FG---------PFLELSLDEEEEMIQLN--ILALTRL---TKAVL--------------- 127

Query: 177 KDYFKDYEEGEIANRG------WCPHSSAYKVSKAVINAYTRILAKRYPKFCVN--CVCP 228
                +   G I N G        P+ + Y  +KA + +++  L +      V    VCP
Sbjct: 128 -PGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCP 186

Query: 229 GFVKTDI 235
           G  +T+ 
Sbjct: 187 GPTRTEF 193

Length = 265

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 75.6 bits (186), Expect = 4e-16
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 60/293 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+N GIG ET R+LA +G  V++  RD  +  EA  +++   ++ E+++ H LD
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRH-LD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVC-YQTYELAVEC-LKTNYYGTKQT 124
           ++ L S+ + A     +  +LD+L   +A V     C Y   E   E     N+ G    
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLIN-NAGV---MRCPYSKTEDGFEMQFGVNHLGHFLL 116

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
              L+ LL+ S   R+VN+SS       +         + ++L  E          K Y 
Sbjct: 117 TNLLLDLLKKSAPSRIVNVSSLAHKAGKI---------NFDDLNSE----------KSYN 157

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDINFHAGIL 242
            G            AY  SK     +TR LA+R     V  N + PG V+T++  H GI 
Sbjct: 158 TG-----------FAYCQSKLANVLFTRELARRLQGTGVTVNALHPGVVRTELGRHTGIH 206

Query: 243 -----------------SVEEGAESPVKLALLPD-GGPTGRFF---LRKEEAP 274
                            +  EGA++ + LAL  +  G +G++F     KE AP
Sbjct: 207 HLFLSTLLNPLFWPFVKTPREGAQTSIYLALAEELEGVSGKYFSDCKLKEPAP 259

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 54/238 (22%), Positives = 81/238 (34%), Gaps = 55/238 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T + L  KG  V +  R+E  G  A  +     V      F Q D
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVK---ATFVQCD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKT---NYYGTKQ 123
           ++    +++       +FG++DIL    A +   K      +L     KT   N  G   
Sbjct: 58  VTSWEQLAAAFKKAIEKFGRVDILINN-AGILDEKSYLFAGKLPPPWEKTIDVNLTGVIN 116

Query: 124 TCEALIPLLELSDSP---RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
           T    +  ++ +       +VN+ S V+ L   P                          
Sbjct: 117 TTYLALHYMDKNKGGKGGVIVNIGS-VAGLY--P-------------------------- 147

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF---CVNCVCPGFVKTDI 235
                         P    Y  SK  +  +TR LA          VN +CPGF  T +
Sbjct: 148 -------------APQFPVYSASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 74.6 bits (184), Expect = 8e-16
 Identities = 53/236 (22%), Positives = 81/236 (34%), Gaps = 46/236 (19%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
             +   + A+VTG+ +GIG     +LA+ G  V++            E ++A+G      
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARAR 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
              Q+D+ D A++ +        FG+LDIL         +       E     +  N  G
Sbjct: 61  ---QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTG 117

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
           T    +A +P L  +   R+V  SS              V G                  
Sbjct: 118 TFLLTQAALPALIRAGGGRIVLTSS--------------VAGPR---------------- 147

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                  +   G     + Y  SKA +  +TR LA         VN V PG V T 
Sbjct: 148 -------VGYPGL----AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTP 192

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 71.9 bits (176), Expect = 7e-15
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 53/278 (19%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG+N GIG      +A +G TV +  R++ R  EA ++++    +  + L H +D+SD
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFL-HIVDMSD 63

Query: 70  LASVSSLADFIKTQFGKLDIL-TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
              V    +  K +  KL +L       V+  ++     E       TN  GT      L
Sbjct: 64  PKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKN---FATNTLGTYILTTHL 120

Query: 129 IPLLELSDSPRLVNLSS---YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           IP+LE  + PR++ +SS    V  L            +  NL  E               
Sbjct: 121 IPVLEKEEDPRVITVSSGGMLVQKL------------NTNNLQSE--------------- 153

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI------NFHA 239
                R     +  Y  +K      T   AK++P+   + + PG+  T        +FHA
Sbjct: 154 -----RTAFDGTMVYAQNKRQQVIMTEQWAKKHPEIHFSVMHPGWADTPAVRNSMPDFHA 208

Query: 240 G----ILSVEEGAESPVKLAL--LPDGGPTGRFFL-RK 270
                + S E+GA++ V LAL       P+GRF+  RK
Sbjct: 209 RFKDRLRSEEQGADTVVWLALSSAAAKAPSGRFYQDRK 246

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 49/235 (20%), Positives = 83/235 (35%), Gaps = 60/235 (25%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG ++GIG     +LA +G  VV+   + +    E   +++  G    ++   + D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVV---RADV 57

Query: 68  SDLASVSSLADFIKTQFGKLDIL---TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           S    V  +   +K +FG+LD+L       A    S++    ++  +    TN       
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMN---TNLKALVHC 114

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +    L+      R+V +SS  S                                    
Sbjct: 115 AQQAAKLMRERGGGRIVAISSLGS------------------------------------ 138

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC-----VNCVCPGFVKTD 234
                 R   P+  A   +KA + A  R LA    +       VN V PG + TD
Sbjct: 139 -----IRAL-PNYLAVGTAKAALEALVRYLAV---ELGPRGIRVNAVSPGVIDTD 184

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (174), Expect = 2e-14
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+VTG++ GIG      LA +G  VV+    +E+   E +E++K  G D    +  +
Sbjct: 5  GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---AIAVK 61

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+S    V +L + I  +FGK+DIL
Sbjct: 62 ADVSSEEDVENLVEQIVEKFGKIDIL 87

Length = 247

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 75/266 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+++GIG     +LA  G  +VL AR+E R     ++L   G +    L    D
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEA---LVVPTD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTNYYGTKQT 124
           +SD  +   L +    +FG +DIL        WS+   +  +L+V    ++ NY G    
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFD-ELTDLSVFERVMRVNYLGAVYC 117

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKA------RAVLGDVENLTEERIEMVVKD 178
             A +P L+ S   ++V +SS ++ L  +P ++       A+ G  ++L   RIE+    
Sbjct: 118 THAALPHLKASRG-QIVVVSS-LAGLTGVPTRSGYAASKHALHGFFDSL---RIEL---- 168

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH 238
                              +   V+                   V  VCPGFV TDI   
Sbjct: 169 -------------------ADDGVA-------------------VTVVCPGFVATDIR-- 188

Query: 239 AGILSVEEGAESPVKLALLPDGGPTG 264
                         K AL  DG P G
Sbjct: 189 --------------KRALDGDGKPLG 200

Length = 263

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 69.3 bits (170), Expect = 7e-14
 Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 69/242 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIGF     LA  G  +V+ +R+E++  EA + ++  GV+         D
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVE---ATAFTCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDA-----------EVDWSKVCYQTYELAVECLK 115
           +SD  ++ +  + I+  FGK+DIL                E +W  V           + 
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDV-----------ID 111

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N  G     +A+   +      +++N+ S +S                           
Sbjct: 112 VNLNGVFFVSQAVARHMIKQGHGKIINICSLLS--------------------------- 144

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
                   E G        P   AY  SK  +   T+ LA  + +    VN + PG+  T
Sbjct: 145 --------ELGG-------PPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPGYFAT 189

Query: 234 DI 235
           ++
Sbjct: 190 EM 191

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 50/232 (21%)

Query: 8   YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
             ++TG+++GIG     +L  +G    VVL AR E    E +++LK        +   + 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE----EPLQELKEELRPGLRVTTVKA 56

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQT 124
           D+SD A V  L + I+   G+ D+L      +   SK+ +   +   +    N       
Sbjct: 57  DLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 125 CEALIPLLELSDSPRL-VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
              L+   +     +  VN+SS  +A+                                 
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSG-AAVN-------------------------------- 143

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI 235
                  +GW      Y  SKA  + + R+LA   P   V    PG V TD+
Sbjct: 144 -----PFKGW----GLYCSSKAARDMFFRVLAAEEPDVRVLSYAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 52/238 (21%), Positives = 88/238 (36%), Gaps = 63/238 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VT ++ GIG    R LA +G  V + AR+ +    A  +L+A G     +     D
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAV---VAD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILT-------KGD-AEVDWSKVCYQTYELAVECLKTNY 118
           ++D   +  L +     FG++DIL         G  AE+        T E  +E      
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAEL--------TDEDWLEAFDLKL 110

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
               +   A++P ++     R+VN+SS              V     NL           
Sbjct: 111 LSVIRIVRAVLPGMKERGWGRIVNISSL------------TVKEPEPNLV---------- 148

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTD 234
                    ++N           V++A +    + L++      V  N V PG++ T+
Sbjct: 149 ---------LSN-----------VARAGLIGLVKTLSRELAPDGVTVNSVLPGYIDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A++TG +KGIGF     L ++G  V +TARD+K   EA  +L   G     +
Sbjct: 1  MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGN----V 56

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDIL 90
          L    D+ D A V    D I   FG LD+L
Sbjct: 57 LGLAADVRDEADVQRAVDAIVAAFGGLDVL 86

Length = 237

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 64/249 (25%), Positives = 94/249 (37%), Gaps = 67/249 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++ G+++GIG E VRQ  + G  V+ TARD      A+  L+A G +        LD
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGAEA-----LALD 52

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE---------CLKTN 117
           ++D ASV+ LA        KLD     DA V  + V Y      VE          + TN
Sbjct: 53  VADPASVAGLA-------WKLD-GEALDAAVYVAGV-YGPRTEGVEPITREDFDAVMHTN 103

Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
             G  Q    L+PL+E +    L  LSS + ++ D                         
Sbjct: 104 VLGPMQLLPILLPLVEAAGG-VLAVLSSRMGSIGDATG---------------------- 140

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINF 237
                         GW      Y+ SKA +N   R  + +        + PG+V+TD+  
Sbjct: 141 ------------TTGWL-----YRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG 183

Query: 238 HAGILSVEE 246
               L   +
Sbjct: 184 AQAALDPAQ 192

Length = 222

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 58/236 (24%), Positives = 89/236 (37%), Gaps = 50/236 (21%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           + K A+VTG+++GIG    R+LA+ G  V +  A       E V +++A+G      +  
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRA---IAV 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           Q D++D A+V+ L D  +T FG++D+L      +    +     E     + TN  G   
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFV 120

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
                     L    R++NLS+ V AL                                 
Sbjct: 121 VLREAAR--HLGQGGRIINLSTSVIALP-------------------------------- 146

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFVKTDINF 237
                      P    Y  SKA +     +LA   R     VN V PG V T++ F
Sbjct: 147 ----------LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF 192

Length = 245

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 16/143 (11%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG++ GIG E    LA  G  +VL+AR E+R  E   +    G  P   +   LD+SD
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELG-APSPHVVP-LDMSD 64

Query: 70  LASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVECLKTNYYGTK 122
           L     + +     FG LDIL        +      +           +E    NY+G  
Sbjct: 65  LEDAEQVVEEALKLFGGLDILINNAGISMRS----LFHDTSIDVDRKIME---VNYFGPV 117

Query: 123 QTCEALIPLLELSDSPRLVNLSS 145
              +A +P L       +V +SS
Sbjct: 118 ALTKAALPHLIERSQGSIVVVSS 140

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 58/264 (21%), Positives = 95/264 (35%), Gaps = 74/264 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG  +G+G    R L ++G  VVL+   ++ G  A  +L       +   F  LD
Sbjct: 6   KVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELG------DAARFFHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLD-------ILTKGDAEV----DWSKVCYQTYELAVECLK 115
           ++D    +++ D  +  FG+LD       ILT G  E     +W ++           L 
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRL-----------LD 108

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N  G      A+IP ++ +    ++N+SS              ++GD            
Sbjct: 109 INLTGVFLGTRAVIPPMKEAGGGSIINMSS-----------IEGLVGD------------ 145

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI----LAKRYPKFCVNCVCPGFV 231
                              P  +AY  SK  +   T+      A +     VN V PG++
Sbjct: 146 -------------------PALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPGYI 186

Query: 232 KTDINFHAGILSVEEGAESPVKLA 255
            T +     I   E G      + 
Sbjct: 187 YTPMTDELLIAQGEMGNYPNTPMG 210

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 43/238 (18%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M++  K   ++TG++ G+G    + LA +G  V++  R+ K+   A ++L   G+ P+  
Sbjct: 1   MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL---GIPPDSY 57

Query: 61  LFHQLDISDLASVSSLADFIKTQFGK-LDILTKGDA-------EVDWSKVCYQTYELAVE 112
               +D+ DL SV    D  +   GK LD L    A       E   S    Q YEL++ 
Sbjct: 58  TIIHIDLGDLDSVRRFVDDFR-ALGKPLDALVCNAAVYMPLLKEPLRSP---QGYELSM- 112

Query: 113 CLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSSYVSALKDL----PEKARAVLGDVEN 166
              TN+ G    C  L+  L+ S    PRLV L +  +  K+L    P  A A LGD+  
Sbjct: 113 --ATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSG 170

Query: 167 LTE---ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT-RILAKRYPK 220
                   I M      K ++ G+           AYK SK + N  T R L +RY +
Sbjct: 171 FEAGFKAPISMADG---KKFKPGK-----------AYKDSK-LCNMLTMRELHRRYHE 213

Length = 322

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 8e-13
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPEL 59
          M +   K A+VTGS++GIG +T + LA  G  VV+  R    R  + V +++A+G     
Sbjct: 1  MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA 60

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDIL---TKGDAEVD 98
          +     D++D  SV++L D  + +FG LD L     G  E  
Sbjct: 61 V---GADLTDEESVAALMDTAREEFGGLDALVLNASGGMESG 99

Length = 248

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.9 bits (161), Expect = 8e-13
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 1   MAEATK-KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPE 58
           MA++ + K A++TG+ +GIG      LA +G+ V L AR E+  L+AV E+++A GV   
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE-NLKAVAEEVEAYGVK-- 57

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNY 118
            ++    D+SD   V++  + +K + G +DIL        + K          + ++ N 
Sbjct: 58  -VVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNL 116

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSS 145
            G      A++P +    S  ++N+SS
Sbjct: 117 MGVYYATRAVLPSMIERQSGDIINISS 143

Length = 239

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 50/238 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A+VTG ++GIG    R LA  G  V +      R  E  E+L K  GV  +    ++ 
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTK---AYKC 65

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQT 124
           D+S   SV      I+  FGK+DIL   +A +   K     TYE   + +  N  G    
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILI-ANAGITVHKPALDYTYEQWNKVIDVNLNGVFNC 124

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +A   + +      L+  +S                            M          
Sbjct: 125 AQAAAKIFKKQGKGSLIITAS----------------------------M---------- 146

Query: 185 EGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY-PKFC-VNCVCPGFVKTDINFHA 239
            G I NR   P   +AY  SKA +    + LA  +   F  VN + PG++ TD+    
Sbjct: 147 SGTIVNR---PQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSISPGYIDTDLTDFV 201

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 18/132 (13%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG ET RQ  ++G  V +T RD      ++E  +A   +  L++  + D
Sbjct: 7   KTALITGGTSGIGLETARQFLAEGARVAITGRDP----ASLEAARAELGESALVI--RAD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDIL--TKGDAEV----DWSKVCYQTYELAVECLKTNYYG 120
             D+A+  +LA  +   FG+LD +    G A+     DW +  +           TN  G
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFD------RSFNTNVKG 114

Query: 121 TKQTCEALIPLL 132
                +AL+PLL
Sbjct: 115 PYFLIQALLPLL 126

Length = 249

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 59/241 (24%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T K A++TG+ +GIG    R  A  G  ++L     +   +  ++L   G     +
Sbjct: 1   MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAV 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCY------QTYELAVECL 114
                D+ D ASV++     K + G++DIL      V+ + VC        + E     +
Sbjct: 60  ---VADVRDPASVAAAIKRAKEKEGRIDIL------VNNAGVCRLGSFLDMSDEDRDFHI 110

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N  G     +A++P +      R+V +SS              V GD           
Sbjct: 111 DINIKGVWNVTKAVLPEMIARKDGRIVMMSS--------------VTGD----------- 145

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVK 232
           +V D       GE          +AY ++KA I   T+ LA  Y +    VN +CPG+V+
Sbjct: 146 MVAD------PGE----------TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVR 189

Query: 233 T 233
           T
Sbjct: 190 T 190

Length = 263

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 36/190 (18%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
             +   + AVVTG + GIG  TV  L   G +V +  RDE+R   A  +L+     P   
Sbjct: 3   QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREK--FPGAR 60

Query: 61  LFHQ-LDISDLASVSSLADFIKTQFGKLDIL----------TKGDAEVD-WSKVCYQTYE 108
           L     D+ D A V++ A  ++ +FG +D+L          T  D   D W        E
Sbjct: 61  LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRD------E 114

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE-------KARA-V 160
           L    LK  Y+       A +PLL  S +  +V ++S + AL+  PE        ARA +
Sbjct: 115 LE---LK--YFSVINPTRAFLPLLRASAAASIVCVNS-LLALQ--PEPHMVATSAARAGL 166

Query: 161 LGDVENLTEE 170
           L  V++L  E
Sbjct: 167 LNLVKSLATE 176

Length = 265

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 65.3 bits (159), Expect = 3e-12
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 15/155 (9%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K  ++TG+N GIGFET R  A  G  V+L  R+  R   AV ++  +      E +    
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAM---T 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKT----NYYG 120
           LD++ L SV   A+  K +   L +L    A      V    + L  + L+T    N+ G
Sbjct: 59  LDLASLRSVQRFAEAFKAKNSPLHVLVCNAA------VFALPWTLTEDGLETTFQVNHLG 112

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 155
                + L  +L  S   R++ +SS      DLP+
Sbjct: 113 HFYLVQLLEDVLRRSAPARVIVVSSESHRFTDLPD 147

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 64.6 bits (157), Expect = 3e-12
 Identities = 58/249 (23%), Positives = 91/249 (36%), Gaps = 70/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPEL 59
           M +   K A+VTG  KGIG      LA +G  VV+     K   E  V +L   G D   
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYA 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILT-----------KGDAEVDWSKVCYQTYE 108
           +   Q D+S +   + L +     FGK+DIL            K     DW +V      
Sbjct: 61  V---QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERV------ 111

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                +  N      T  A++P +  ++  R++++SS +                     
Sbjct: 112 -----IDVNLSSVFNTTSAVLPYITEAEEGRIISISSII--------------------- 145

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G+    G     + Y  +KA +  +T+ LA    K    VN +
Sbjct: 146 -----------------GQAGGFG----QTNYSAAKAGMLGFTKSLALELAKTNVTVNAI 184

Query: 227 CPGFVKTDI 235
           CPGF+ T++
Sbjct: 185 CPGFIDTEM 193

Length = 247

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          T + A+VTGS++GIG+     LA  G  V+L  RD  +   A E LK  G+    L F  
Sbjct: 9  TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF-- 66

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++D  +V +  D  + + G +DIL
Sbjct: 67 -DVTDHDAVRAAIDAFEAEIGPIDIL 91

Length = 255

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.5 bits (158), Expect = 3e-12
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG++ GIG    R+ A++G  VV+T R+E+       ++ A G      +    D
Sbjct: 6  KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGR----AIAVAAD 61

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +SD A V +       +FG +DIL
Sbjct: 62 VSDEADVEAAVAAALERFGSVDIL 85

Length = 251

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 53/240 (22%), Positives = 84/240 (35%), Gaps = 70/240 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG+  GIG  T +  A +G  VV+  RD +        + A G         Q D
Sbjct: 6   RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGR----AFARQGD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDA-----------EVDWSKVCYQTYELAVECLK 115
           +    +V +L DF+  ++G+LD+L                E DW  V           ++
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAV-----------MR 110

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N  G     +  IP+++      +VN +S +           A+ G             
Sbjct: 111 VNVGGVFLWAKYAIPIMQRQGGGSIVNTASQL-----------ALAGGRGR--------- 150

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
                                 +AY  SK  I + TR +A  +      VN V PG + T
Sbjct: 151 ----------------------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDT 188

Length = 252

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          + K AVVTG++ G+G    R+LA+ G  V+L  R+  +G  AV  ++ +  D +L L   
Sbjct: 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSL-RA 71

Query: 65 LDISDLASVSSLAD 78
          LD+S LASV++L +
Sbjct: 72 LDLSSLASVAALGE 85

Length = 313

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 63.9 bits (156), Expect = 8e-12
 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 19/144 (13%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G ET R LA  G  V++ AR      EA+  +    V         LD
Sbjct: 27  KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVM-------LD 79

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT-----YELAVECLKTNYYGT 121
           ++DL SV + A+       ++DIL    A V     C +T     +E       TN+ G 
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINN-AGV---MACPETRVGDGWEAQ---FATNHLGH 132

Query: 122 KQTCEALIPLLELSDSPRLVNLSS 145
                 L P L      R+V LSS
Sbjct: 133 FALVNLLWPALAAGAGARVVALSS 156

Length = 315

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 63.1 bits (154), Expect = 8e-12
 Identities = 58/260 (22%), Positives = 90/260 (34%), Gaps = 69/260 (26%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            ++TG++ GIG    R+ A  G  V L AR   R  E   +L       E+     LD++
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEV---EILDVT 57

Query: 69  DLASVSSLADFIKTQFGKLDIL---------TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
           D      +   ++ + G LD++         T       +     +T +       TN  
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLS-FKAF-RETID-------TNLL 108

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
           G     EA +P         LV +SS V+AL+ LP  A                      
Sbjct: 109 GAAAILEAALPQFRAKGRGHLVLISS-VAALRGLPGAA---------------------- 145

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDIN- 236
                              AY  SKA +++    L     K    V  + PGF+ T +  
Sbjct: 146 -------------------AYSASKAALSSLAESLRYDVKKRGIRVTVINPGFIDTPLTA 186

Query: 237 --FHA-GILSVEEGAESPVK 253
             F    ++SVE+ A+   K
Sbjct: 187 NMFTMPFLMSVEQAAKRIYK 206

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 62.9 bits (153), Expect = 9e-12
 Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 69/245 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG++ GIG  T R LA++G  V + AR   R     ++L+A G    +L   +LD
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVL---ELD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKG----------DAE-VDWSKVCYQTYELAVECLK 115
           ++D   V +  +      G+LDIL             DA+  DW+++           + 
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRM-----------ID 109

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
           TN  G   T  A +P   L +   +VN+SS                              
Sbjct: 110 TNLLGLMYTTHAALPHHLLRNKGTIVNISS------------------------------ 139

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFVKT 233
                       +A R    +S+ Y  +K  +NA++  L +        V  + PG V T
Sbjct: 140 ------------VAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEPGTVDT 187

Query: 234 DINFH 238
           ++  H
Sbjct: 188 ELRDH 192

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 80/276 (28%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
              A++TG++ GIG  T    A  G  + L AR +   LEA+  +L+++GV       + 
Sbjct: 6   MPRALITGASSGIGKATALAFAKAGWDLALVARSQDA-LEALAAELRSTGVK---AAAYS 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL--------TKGDAEV---DWSKVCYQTYELAVEC 113
           +D+S+  +++     +  QFG  D+L        T    E+   DW  V           
Sbjct: 62  IDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWV----------- 110

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           ++ N     Q C A++P +       ++N+SS                            
Sbjct: 111 IQLNLTSVFQCCSAVLPGMRARGGGLIINVSS---------------------------- 142

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFV 231
                         IA R   P   AY VSKA + A+T+ LA+  R     V  +  G V
Sbjct: 143 --------------IAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAV 188

Query: 232 KTDI--------NF-HAGILSVEEGAESPVKLALLP 258
            T +        +F  + +LS E+ A++ + LA LP
Sbjct: 189 NTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLP 224

Length = 241

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A+VTGS +G+GFE  R LA  G  V++  R+      AV  L+A+G   E L F   D
Sbjct: 12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF---D 68

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          I+D  +V++    I  + G+LDIL
Sbjct: 69 IADEEAVAAAFARIDAEHGRLDIL 92

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 10/142 (7%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGL--EAVEKLKASGVDPELLLFH 63
              ++TG   G+G    R LA++G   +VL +R        E V +L+A G +       
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVT---VA 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
             D++D  ++++L   +    G LD +      +D   +   T E     L     G   
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWN 117

Query: 124 TCEALIPLLELSDSPRLVNLSS 145
             E    L    D    V  SS
Sbjct: 118 LHELTRDL----DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 55/238 (23%), Positives = 84/238 (35%), Gaps = 48/238 (20%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
               + K A+VTG   GIG  T    A +G  VV+  RD   G E V  ++ +G +    
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEA--- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDI-LTKGDAEVDWSKVCYQTYELAVECLKTNYY 119
           LF   D++  A V +L +     +G+LD        E++  ++   +       +  N  
Sbjct: 59  LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVK 118

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
           G     +  IPL+       +VN +S                                  
Sbjct: 119 GVWLCMKYQIPLMLAQGGGAIVNTAS---------------------------------- 144

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                   +A  G  P  S Y  SK  +   T+  A  Y K    VN VCP  + TD+
Sbjct: 145 --------VAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194

Length = 253

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 63/246 (25%), Positives = 94/246 (38%), Gaps = 69/246 (28%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K A+VTG++ GIG     +LA+ G  VV+  R ++   E  VE++KA G      +  
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKA---IAV 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILT-----KGDAEV------DWSKVCYQTYELAVE 112
           Q D+S    V +L      +FG LDIL      +GDA        DW+KV      + V 
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKV------IDVN 112

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            L   +   +   EA+    +     +++N+SS                        E+I
Sbjct: 113 -LTGQFLCAR---EAIKRFRKSKIKGKIINMSS----------------------VHEKI 146

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGF 230
                               W  H   Y  SK  +   T+ LA+ Y      VN + PG 
Sbjct: 147 P-------------------WPGH-VNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGA 186

Query: 231 VKTDIN 236
           + T IN
Sbjct: 187 INTPIN 192

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL-LLFHQ 64
            K+ ++TG + GIG    ++L  +G  V++ AR E +  EAVE+++A        + +  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL--TKGDAEV-DWSKVCYQTYELAVECLKTNYYGT 121
            D+SD   V         + G  D++    G +    +  +  + +E  ++    NY+G+
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMD---VNYFGS 117

Query: 122 KQTCEALIPLLELSDSPRLVNLSS 145
                A++PL++      +V +SS
Sbjct: 118 LNVAHAVLPLMKEQRPGHIVFVSS 141

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 6  KKYAVVTGSNKGIGFETVRQL-----ASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          +K  +VTG+N G+G     +L      +  +T++L  R+ +R   A   L AS  D  ++
Sbjct: 1  RKVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVV 60

Query: 61 L-FHQLDISDLASVSSLADFIKTQFGKLDIL 90
            +  +D+S++ SV + A  +K ++ +LD L
Sbjct: 61 FDYVLVDLSNMVSVFAAAKELKKRYPRLDYL 91

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 24/151 (15%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG++ G G  T  +LA KG  V+ T R+ ++    + +     +  + +   QL
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQL 61

Query: 66  DISDLASVSSLADFIKTQFGKLDILTK-------GDAEVDWSKVCYQTYELAVECLK--- 115
           D++D  S+ +    +K   G++D+L         G  E           E+ VE  +   
Sbjct: 62  DVTDQNSIHNFQLVLKE-IGRIDLLVNNAGYANGGFVE-----------EIPVEEYRKQF 109

Query: 116 -TNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
            TN +G     +A++P +    S +++N+SS
Sbjct: 110 ETNVFGAISVTQAVLPYMRKQKSGKIINISS 140

Length = 280

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 44/146 (30%), Positives = 59/146 (40%), Gaps = 20/146 (13%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K A+VTG+++GIG  T R L ++G  V + ARDE R   A  +      G+         
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGL--------A 52

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+ D A V    D ++  FG LD L           V   T E     L TN  G    
Sbjct: 53  GDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYC 112

Query: 125 C-EALIPLLELSDSPR----LVNLSS 145
             +A   LL      R    +VN+ S
Sbjct: 113 IHKAAPALL-----RRGGGTIVNVGS 133

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 52/238 (21%), Positives = 82/238 (34%), Gaps = 47/238 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFHQL 65
           K A++TGS+ GIG  T    A  G  + LT RD +R LE   +    +GV  + +L    
Sbjct: 4   KVAIITGSSSGIGAGTAILFARLGARLALTGRDAER-LEETRQSCLQAGVSEKKILLVVA 62

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D+++      +      +FG+LDIL      +       Q  E   + +  N        
Sbjct: 63  DLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLT 122

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +  +P L +     +VN+SS                                        
Sbjct: 123 KLAVPHL-IKTKGEIVNVSSVAGGRS---------------------------------- 147

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGI 241
                    P    Y +SKA ++ +TR  A         VN V PG + T  +   G+
Sbjct: 148 --------FPGVLYYCISKAALDQFTRCTALELAPKGVRVNSVSPGVIVTGFHRRMGM 197

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 27/149 (18%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG++ GIG  T R+LA++G TV   AR     ++ +E L + GV P       L
Sbjct: 3   KKVALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDLASLGVHP-----LSL 53

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE---------CLKT 116
           D++D AS+ +  D I  + G++D+L         +   Y +Y  A+E           + 
Sbjct: 54  DVTDEASIKAAVDTIIAEEGRIDVL--------VNNAGYGSYG-AIEDVPIDEARRQFEV 104

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSS 145
           N +G  +  + ++P +    S R++N+SS
Sbjct: 105 NLFGAARLTQLVLPHMRAQRSGRIINISS 133

Length = 273

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTG+  GIG E    LA +G  VV+   +++    A E L+ +G      +   
Sbjct: 3  KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK---AIGVA 59

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
          +D++D  ++++  D+    FG +DIL
Sbjct: 60 MDVTDEEAINAGIDYAVETFGGVDIL 85

Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 7e-11
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG++ GIG  T  ++A  G TV L AR+ +   E V +++A G        +  D
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT---AHAYTCD 428

Query: 67  ISDLASVSSLADFIKTQFGKLDIL 90
           ++D A+V      I  + G +D L
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYL 452

Length = 657

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 60.6 bits (147), Expect = 7e-11
 Identities = 63/257 (24%), Positives = 93/257 (36%), Gaps = 59/257 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVDPELLLFHQ 64
           K A+VTG+  GIG     +LA +G  VV+   D       V ++   A  +        +
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALAL--------R 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTNYYGTK 122
           +D++D   V++L +    +FG LD+L      +  +     T +LAV  + +  N  GT 
Sbjct: 56  VDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDT-DLAVWDQTMAINLRGTF 114

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
             C    P +       +VNLSS                                     
Sbjct: 115 LCCRHAAPRMIARGGGSIVNLSS------------------------------------- 137

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNC--VCPGFVKTDINFHAG 240
                IA +   P   AY  SKA I   TR LA       + C  + PG + T +     
Sbjct: 138 -----IAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPLLLAK- 191

Query: 241 ILSVEEGAESPVKLALL 257
            L+  EGA  P    LL
Sbjct: 192 -LAGFEGALGPGGFHLL 207

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 60.9 bits (148), Expect = 7e-11
 Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 11/172 (6%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASGVDPEL 59
           M     K AV+TG++ GIG  +   LA +G  V+  A D    + E V+K+K++G   + 
Sbjct: 1   MKRLENKVAVITGASTGIGQASAIALAQEGAYVL--AVDIAEAVSETVDKIKSNGGKAKA 58

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWS--KVCYQTYELAVECLKTN 117
             +H +DISD   V   A  IK QFG++D+L   +A VD +  ++     ++  + +  +
Sbjct: 59  --YH-VDISDEQQVKDFASEIKEQFGRVDVLFN-NAGVDNAAGRIHEYPVDVFDKIMAVD 114

Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA-RAVLGDVENLT 168
             GT    + L+PL+ +     ++N SS+     DL      A  G V N T
Sbjct: 115 MRGTFLMTKMLLPLM-MEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFT 165

Length = 272

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 18/154 (11%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           + A++TG++KGIG    R+    G  V++ ARD     +A ++L     + E+   H L 
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREV---HGLA 66

Query: 66  -DISDLASVSSLADFIKTQFGKLDILTKG------DAEVDWSKVCYQTYELAVECLKTNY 118
            D+SD     ++ D+++  +  L IL          A +D+++  ++         +TN 
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWR------GIFETNL 120

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 152
           +   +      PLL+   S  +VN+ S VS L  
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGS-VSGLTH 153

Length = 257

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 8e-11
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 3/140 (2%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K   VTG+  GIG  T  +LA++G  + LT RD     + V   +A G    +     LD
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG--GTVPEHRALD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ISD  +V++ A  I    G +D++        W  V   T+E     +  N  G     E
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIE 118

Query: 127 ALIP-LLELSDSPRLVNLSS 145
             +P ++       LVN+SS
Sbjct: 119 TFVPPMVAAGRGGHLVNVSS 138

Length = 272

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG ++G+G +    L   G  VVL+AR  +   EA   L+A G+D   +     D
Sbjct: 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI---AAD 69

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D A +  LA+    +FG +DIL
Sbjct: 70 VADEADIERLAEETLERFGHVDIL 93

Length = 259

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 19/158 (12%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             K  +VTG+N+GIG   V  L + G   V    RD       +       V P  L   
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPG-SAAHLVAKYGDKVVPLRL--- 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLK----TNYY 119
             D++D  S+ + A   K     +D++   +A V   K      E A+E LK     N +
Sbjct: 58  --DVTDPESIKAAAAQAK----DVDVVIN-NAGV--LKPATLLEEGALEALKQEMDVNVF 108

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 157
           G  +  +A  P+L+ +    +VNL+S V++LK+ P   
Sbjct: 109 GLLRLAQAFAPVLKANGGGAIVNLNS-VASLKNFPAMG 145

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 56/230 (24%), Positives = 84/230 (36%), Gaps = 48/230 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG  KGIG+  V +LA  G  V   AR++K   E + + +  G   E       D
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS---VCD 63

Query: 67  ISDLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           +S  +    L D + + F GKL+IL          +    T E     + TN+       
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLS 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
               PLL+ S +  +V +SS V+ +  +                                
Sbjct: 124 RLAHPLLKASGNGNIVFISS-VAGVIAV-------------------------------- 150

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
                    P  + Y  +K  +N  TR LA  + K    VN V P  + T
Sbjct: 151 ---------PSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAPWVIAT 191

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 56/237 (23%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           + K A+VTGS++GIG     +LA +G  + +  AR  K   E  E+++A G     +   
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAV--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE----CLKTNYY 119
           + ++ D+  +  +   I  +FG+LD+     A    S V     EL        +  N  
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA----SGVLRPAMELEESHWDWTMNINAK 115

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                 +    L+E     ++++LSS               LG +              Y
Sbjct: 116 ALLFCAQEAAKLMEKVGGGKIISLSS---------------LGSIR-------------Y 147

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYPK-FCVNCVCPGFVKTD 234
            ++Y              +   VSKA + A TR LA +  PK   VN V  G V TD
Sbjct: 148 LENY--------------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTD 190

Length = 250

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 66/277 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG    +G    R LA  G  V    R++++G +  +++ A G      +    D
Sbjct: 6   KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRA---IALAAD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKG------DAEVDWSKVCYQT----YELAVECLKT 116
           + D AS+    + I  QFG +DIL  G      DA  D      +T    ++L  E  + 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 117 ----NYYGT-KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
               N  G+   +      +LE      ++N+SS ++A   L                  
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLE-QKGGSIINISS-MNAFSPL------------------ 162

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
                          ++          AY  +KA ++ +T+ LA  +      VN + PG
Sbjct: 163 --------------TKVP---------AYSAAKAAVSNFTQWLAVEFATTGVRVNAIAPG 199

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           F  T  N     L   +G+ +     +L    P GRF
Sbjct: 200 FFVTPQNRKL--LINPDGSYTDRSNKIL-GRTPMGRF 233

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 55/229 (24%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             +TG  +GIG     + A+ G  +++  RD     E  +KL  +  D  L +  Q DI+
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDA----EGAKKLAEALGDEHLSV--QADIT 325

Query: 69  DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
           D A+V S    I+ ++G+LD+L                     E  K +    +Q+ E  
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAG--------------IAEVFKPS---LEQSAEDF 368

Query: 129 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVL--GDVENLTEERIEMVVKDYFKDYEEG 186
             + +       VNLS   +  +     AR +   G + NL                  G
Sbjct: 369 TRVYD-------VNLSGAFACAR---AAARLMSQGGVIVNL------------------G 400

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
            IA+    P  +AY  SKA +   +R LA  +      VN V PG+++T
Sbjct: 401 SIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIET 449

Length = 520

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 62/286 (21%), Positives = 98/286 (34%), Gaps = 77/286 (26%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K A+VTG+  GIG    R LA+ G  VV+    E+    A +    +G       +   
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVI---YLPA 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILTK--GDAEV---------DWSKVCYQTYELAVECL 114
           D++    ++ +      +FG LDIL    G   V         DW ++           +
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRI-----------I 106

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
                    T  A +P ++     R++N++S    L   P K+                 
Sbjct: 107 AVMLTSAFHTIRAALPHMKKQGWGRIINIAS-AHGLVASPFKS----------------- 148

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVK 232
                                   AY  +K  +   T++LA         VN +CPG+V+
Sbjct: 149 ------------------------AYVAAKHGLIGLTKVLALEVAEHGITVNAICPGYVR 184

Query: 233 T-----DINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 273
           T      I   A    + E  E  ++  +L  G PT RF    E A
Sbjct: 185 TPLVEKQIADQAKTRGIPE--EQVIREVMLK-GQPTKRFVTVDEVA 227

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPEL 59
          M     K A+VTG  +G+G    R  A +G   +V+  R+ ++G     +L+A G     
Sbjct: 1  MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKA-- 58

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
           +F Q D+SD+     +       FG+LD L
Sbjct: 59 -VFVQADLSDVEDCRRVVAAADEAFGRLDAL 88

Length = 260

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 57/232 (24%), Positives = 86/232 (37%), Gaps = 51/232 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG E  R LA  G  V L  R+     E +  L ASG D E       D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEA---VPYD 53

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
             D     +L D ++ +FG++D+L         + +   +          N     +   
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTR 113

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           AL+P L  + S R+V L+S +S                                     G
Sbjct: 114 ALLPALREAGSGRVVFLNS-LS-------------------------------------G 135

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKR--YPKFCVNCVCPGFVKTDIN 236
           +    G    ++ Y  SK  + A    L +        V+ VCPGFV T + 
Sbjct: 136 KRVLAG----NAGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 57.9 bits (140), Expect = 8e-10
 Identities = 68/291 (23%), Positives = 106/291 (36%), Gaps = 45/291 (15%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K   V+TG++ G+G    + LA +G   VV+  RD  +  +A +++   G+  +      
Sbjct: 1   KGTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEV---GMPKDSYSVLH 57

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDA-EVDWSKVCYQTYELAVECLKTNYYGTKQ 123
            D++ L SV    D  +     LD L    A  +  +K    T +     +  N+ G   
Sbjct: 58  CDLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFL 117

Query: 124 TCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA--RAVLGDVENL--TEERIEMVVK 177
               L+  L+ S+  SPR+V + S       L      RA LGD+E L    +    ++ 
Sbjct: 118 LTNLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMI- 176

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPG----- 229
               D  E E A         AYK SK      T  L +R         N + PG     
Sbjct: 177 ----DGGEFEGAK--------AYKDSKVCNMLTTYELHRRLHEETGITFNSLYPGCIAET 224

Query: 230 -------------FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFF 267
                        F         G +S EE  E    +   P  G +G ++
Sbjct: 225 GLFREHYPLFRTLFPPFQKYITKGYVSEEEAGERLAAVIADPSLGVSGVYW 275

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 59/235 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG+ +G+G       A  G  V++ AR E +  E  E+++A+G    ++     D
Sbjct: 11  QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVA---AD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           ++   + + LA      FG+LDI+      T  +  +  S     T +LA +    N   
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTS-----TKDLA-DAFTFNVAT 121

Query: 121 TKQTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                 A +PL LE S    ++N+SS +                                
Sbjct: 122 AHALTVAAVPLMLEHSGGGSVINISSTM-------------------------------- 149

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT 233
                 G +A RG+    +AY  +KA +  YTR+ A    P+  VN + PG + T
Sbjct: 150 ------GRLAGRGF----AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILT 194

Length = 263

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLT-------ARDEKRGLEAVEKLKASGVDPE 58
           K A+VTGS  GIG    R LA+ G  +VL            + GL A   +K       
Sbjct: 2  GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKV------ 55

Query: 59 LLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
            L+H  D+S  A++  +  + + QFG +DIL
Sbjct: 56 --LYHGADLSKPAAIEDMVAYAQRQFGGVDIL 85

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 69/239 (28%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG+  G+G     + A +G  + L   +E+ G E ++ L+ +G D     + + D+ D
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVRD 60

Query: 70  LASVSSLADFIKTQFGKLDILTK--------GDAEV---DWSKVCYQTYELAVECLKTNY 118
            + +++LA   + ++G +D++             E+   DW              +  N 
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQ-----------IAINL 109

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
            G  + C+A +PL +   S R+VN++S ++ L   P                        
Sbjct: 110 MGVVKGCKAFLPLFKRQKSGRIVNIAS-MAGLMQGPA----------------------- 145

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI 235
                              S+Y V+KA + A +  L          V+ VCP F +T++
Sbjct: 146 ------------------MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186

Length = 270

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFH 63
           +  A+VTG  +GIG    R LA+ G  + +    D++      ++L+A GV+   ++F 
Sbjct: 1  MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE---VIFF 57

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
            D++DL++  ++ D  +  +G++D L
Sbjct: 58 PADVADLSAHEAMLDAAQAAWGRIDCL 84

Length = 256

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 39/228 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+   IG    + L S G  ++L   +     +  E+L     +   ++  +LD
Sbjct: 3   KIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNR--VIALELD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKG---DAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           I+   S+  L +    +FG++DIL        +V  S+     YE   E L  N  G   
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A I L +      ++N++S                          I  V+   F+ Y
Sbjct: 121 CSQAFIKLFKKQGKGSIINIAS--------------------------IYGVIAPDFRIY 154

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPG 229
           E  ++ +         Y V KA I   T+ LAK Y      VN + PG
Sbjct: 155 ENTQMYS------PVEYSVIKAGIIHLTKYLAKYYADTGIRVNAISPG 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 55/242 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG++ G+G    + LA  G  VVL +R  +R  E   +++A G    ++    LD
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVV---SLD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT----K 122
           ++D  S+ +     +T+ G +DIL          K+   T         TN  G     +
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126

Query: 123 QTCEALIPLLELSDSP----RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
           +  + +I   + + +     R++N++S V+ L+ LP+     +G                
Sbjct: 127 EVAKRMIARAKGAGNTKPGGRIINIAS-VAGLRVLPQ-----IG---------------- 164

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDIN 236
                                Y +SKA +   TR +A  + +    VN +CPG++ T+IN
Sbjct: 165 --------------------LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204

Query: 237 FH 238
            H
Sbjct: 205 HH 206

Length = 258

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 5/87 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFH 63
          T K A+VTG+++GIG    + LA +G  V++++R +  G +AV + + A+G   E L  H
Sbjct: 7  TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR-KLDGCQAVADAIVAAGGKAEALACH 65

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
             I ++  + +L   I+ + G+LDIL
Sbjct: 66 ---IGEMEQIDALFAHIRERHGRLDIL 89

Length = 252

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 29/153 (18%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T    ++TG   GIG    R+    G TV++T R E+R  EA ++L         +    
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN-------IHTIV 56

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVE 112
           LD+ D  SV +LA+ + +++  LDIL                +++D         +   E
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLD---------KADTE 107

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
            + TN  G  +  +A +P L+      +VN+SS
Sbjct: 108 -IDTNLIGPIRLIKAFLPHLKKQPEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A +TG   GIG    +  A  G +V +  R  +    A E++ ++          Q D
Sbjct: 4  KVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSAT--GGRAHPIQCD 61

Query: 67 ISDLASVSSLADFIKTQFGKLDILTKGDA 95
          + D  +V +  D    +FGK+DIL    A
Sbjct: 62 VRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 21/158 (13%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVEKLKAS 53
            K A VTG+++GIG     +LA  G TVV+ A+    G             E  E+++A+
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVC---YQTYELA 110
           G      L   +D+ D   V +L +    QFG+LDIL      +  S V     + ++L 
Sbjct: 63  GGQA---LPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLM 119

Query: 111 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS 148
                 N  GT    +A +P +  +    ++N+S  +S
Sbjct: 120 QR---VNLRGTYLLSQAALPHMVKAGQGHILNISPPLS 154

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  VVTG+ +GIG E  R+L ++G  + L   +E   L A+    A     + +L    D
Sbjct: 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE-LAALA---AELGGDDRVLTVVAD 65

Query: 67 ISDLASVSSLADFIKTQFGKLDI 89
          ++DLA++ + A+    +FG +D+
Sbjct: 66 VTDLAAMQAAAEEAVERFGGIDV 88

Length = 296

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 55/227 (24%), Positives = 83/227 (36%), Gaps = 45/227 (19%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           +VTG++ GIG E     A  G TV+L  R+E++  +  + +   G          L    
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 70  LASVSSLADFIKTQFGKLD-ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
             +   LA  I   + +LD +L       D   +  Q  ++  +  + N   T    +AL
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQAL 127

Query: 129 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEI 188
           +PLL  SD+  LV  SS V        + RA  G                          
Sbjct: 128 LPLLLKSDAGSLVFTSSSVG------RQGRANWG-------------------------- 155

Query: 189 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
                     AY VSK       ++LA  Y +    VNC+ PG  +T
Sbjct: 156 ----------AYAVSKFATEGLXQVLADEYQQRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          + K AVVTG   GIG       A+KG  V L  R      E V ++ A  +         
Sbjct: 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-----EDVAEVAAQ-LLGGNAKGLV 67

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+SD  SV +    + + FG++DIL
Sbjct: 68 CDVSDSQSVEAAVAAVISAFGRIDIL 93

Length = 255

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + AV+TG   GIG  T R+LA++G TVV+   D + G  A +++          LF   D
Sbjct: 8  RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG--------LFVPTD 59

Query: 67 ISDLASVSSLADFIKTQFGKLDI 89
          ++D  +V++L D     +G +DI
Sbjct: 60 VTDEDAVNALFDTAAETYGSVDI 82

Length = 255

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDI 67
           V+TG++ G+G  T R  A +G  VVL AR E  GLE    +++A+G +    L    D+
Sbjct: 11 VVITGASAGVGRATARAFARRGAKVVLLARGE-EGLEALAAEIRAAGGEA---LAVVADV 66

Query: 68 SDLASVSSLADFIKTQFGKLDI 89
          +D  +V + AD  + + G +D 
Sbjct: 67 ADAEAVQAAADRAEEELGPIDT 88

Length = 334

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
            + T K  ++TG++ GIG     Q A +G TVV  AR E       +++  +G D     
Sbjct: 36  VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA-- 93

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDIL 90
               D+SDL +V +L   ++ + G +DIL
Sbjct: 94  -VPCDLSDLDAVDALVADVEKRIGGVDIL 121

Length = 293

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 70/269 (26%), Positives = 95/269 (35%), Gaps = 55/269 (20%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K   +TGS+ G+G    R L  +G  VVL AR +KR  +A          P        
Sbjct: 7   MKRIFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC------PGAAGVLIG 60

Query: 66  DISDLASVSSLADFIKTQFGKLD--ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           D+S LA    LAD +    G+ D  I   G       K            +  N      
Sbjct: 61  DLSSLAETRKLADQVNA-IGRFDAVIHNAGILSGPNRK---TPDTGIPAMVAVN------ 110

Query: 124 TCEALIP--LLELSDSP-RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
               L P  L  L   P RL+ LSS       +     A L D+             D+F
Sbjct: 111 ---VLAPYVLTALIRRPKRLIYLSS------GMHRGGNASLDDI-------------DWF 148

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAG 240
                    NRG    S AY  SK  +      +A+R+     N V PG+V T +     
Sbjct: 149 ---------NRGE-NDSPAYSDSKLHVLTLAAAVARRWKDVSSNAVHPGWVPTKMGGAGA 198

Query: 241 ILSVEEGAESPVKLALLPDGGP--TGRFF 267
              +E+G  + V LA   D     +G +F
Sbjct: 199 PDDLEQGHLTQVWLAESDDPQALTSGGYF 227

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 56.0 bits (135), Expect = 6e-09
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 53/238 (22%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +A  +  +VTG+  GIG    ++ A  G  VV+  R+ +R  E  + L   G D   L  
Sbjct: 2   KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHAL-- 56

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYG 120
             +D+SD A +    + +  +FG++D+L       D   +     T E        N  G
Sbjct: 57  -AMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTG 115

Query: 121 TKQ-TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                 EAL  ++E      +VN++S  + L  LP++                       
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVAS-GAGLVALPKR----------------------- 151

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK-FCVNCVCPGFVKTDI 235
                             +AY  SKA + + TR LA  +  K   VN V PG+V+T +
Sbjct: 152 ------------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 12/86 (13%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          + K   VTG+ +GIG+         G  V     D                +        
Sbjct: 7  SGKTVWVTGAAQGIGYAVALAFVEAGAKV--IGFD----------QAFLTQEDYPFATFV 54

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
          LD+SD A+V+ +   +  + G LD+L
Sbjct: 55 LDVSDAAAVAQVCQRLLAETGPLDVL 80

Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 65/291 (22%), Positives = 98/291 (33%), Gaps = 78/291 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG    R  A +G  V L   D      A   +        +L     D
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPA-D 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILTK-------GD----AEVDWSKVCYQTYELAVECLK 115
           ++D ASV++     +  FG LD+L          D     + DW +           C  
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRR-----------CFA 115

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            +  G    C A++P +       +VN++S   A K +                      
Sbjct: 116 VDLDGAWNGCRAVLPGMVERGRGSIVNIAS-THAFKII---------------------- 152

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK-FCVNCVCPGFVKT 233
                              P    Y V+K  +   TR L   Y  +   VN + PG+++T
Sbjct: 153 -------------------PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIET 193

Query: 234 DINFHAGILSVEE-GAESPVKLALLPDGGPTGR--------FFLRKEEAPF 275
            +       +  +  A     LAL P     GR         FL  +EAPF
Sbjct: 194 QLT-EDWWNAQPDPAAARAETLALQP-MKRIGRPEEVAMTAVFLASDEAPF 242

Length = 260

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 64/274 (23%), Positives = 102/274 (37%), Gaps = 79/274 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  G G    R+ A +G  VV+   +        E++ A     E  +  Q D
Sbjct: 6   KVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAAD--IGEAAIAIQAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILT---------KGDAEVD---WSKVCYQTYELAVECL 114
           ++  A V ++ +   ++FG+LDIL          K   EVD   + +V       AV   
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRV------FAVNV- 112

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           K+ Y   +    AL+P +E      ++N++S  + L+  P            LT      
Sbjct: 113 KSIYLSAQ----ALVPHMEEQGGGVIINIAS-TAGLRPRP-----------GLT------ 150

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVK 232
                             W      Y  SK  +   T+ +A         VNC+CP   +
Sbjct: 151 ------------------W------YNASKGWVVTATKAMAVELAPRNIRVNCLCPVAGE 186

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T       +LS+  G ++P   A      P GR 
Sbjct: 187 T------PLLSMFMGEDTPENRAKFRATIPLGRL 214

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          V+TG++ GIG  T    A +G  VVL AR  +   E   +++  G +    +    D++D
Sbjct: 4  VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE---AIAVVADVAD 60

Query: 70 LASVSSLADFIKTQFGKLDI 89
           A V   AD    +FG++D 
Sbjct: 61 AAQVERAADTAVERFGRIDT 80

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 54.5 bits (132), Expect = 9e-09
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VTG+N+GIG   V QL ++G   V   ARD     E+V  L    V P      QL
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTDL-GPRVVPL-----QL 56

Query: 66  DISDLASVSSLADFIKTQFGKLDILTK--GDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           D++D ASV++ A+        + IL    G        +     +     ++TNY+G   
Sbjct: 57  DVTDPASVAAAAE----AASDVTILVNNAGIFRTGSL-LLEGDEDALRAEMETNYFGPLA 111

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPE 155
              A  P+L  +    +VN+ S V +  + P 
Sbjct: 112 MARAFAPVLAANGGGAIVNVLS-VLSWVNFPN 142

Length = 238

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 54.5 bits (132), Expect = 9e-09
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 25/148 (16%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VTG++ GIG  T  +LA  G  V  T+R+  R         A+ +    LL  +
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR---------AAPIPGVELL--E 51

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTK-------GDAEVDWSKVCYQTYELAVECLKTN 117
           LD++D ASV +  D +  + G++D+L         G AE         +   A     TN
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAE-------ESSIAQAQALFDTN 104

Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSS 145
            +G  +   A++P +    S R++N+SS
Sbjct: 105 VFGILRMTRAVLPHMRAQGSGRIINISS 132

Length = 270

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 17/169 (10%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG+  GIG ET    A  G  V L   DE  GL A+    A+ +  E ++   LD++D 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDED-GLAAL----AAELGAENVVAGALDVTDR 59

Query: 71  AS-VSSLADFIKTQFGKLDIL--TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
           A+  ++LADF     G+LD L    G       +            +  N  G      A
Sbjct: 60  AAWAAALADFAAATGGRLDALFNNAGVGRGGPFED--VPLAAHDRMVDINVKGVLNGAYA 117

Query: 128 LIPLLELSDSPRLVNLSSYVSALKDLPEKA------RAVLGDVENLTEE 170
            +P L+ +   R++N +S  SA+   P+ A       AV G  E L  E
Sbjct: 118 ALPYLKATPGARVINTAS-SSAIYGQPDLAVYSATKFAVRGLTEALDVE 165

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           ++TG   GIG     + A +G  VV+   +EK   E    ++ +G     + +++ D+S
Sbjct: 2  VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK---VHYYKCDVS 58

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
              V   A  IK + G + IL
Sbjct: 59 KREEVYEAAKKIKKEVGDVTIL 80

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A+VTG    IG    R L + G  V +   D   G      + AS    E  
Sbjct: 1  MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG----AAVAAS--LGERA 54

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDIL 90
           F   DI+D A++      +  +FG++DIL
Sbjct: 55 RFIATDITDDAAIERAVATVVARFGRVDIL 84

Length = 261

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  GIG  T ++LA++G  VVL   DE+    A  +L          L    D
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDR----ALGVACD 478

Query: 67  ISDLASVSSLADFIKTQFGKLDIL 90
           ++D A+V +  +     FG +DI+
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIV 502

Length = 681

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           +TG  +GIG  T R LA+ G  V +   DE          K +  +  L++   LD++D
Sbjct: 9  AITGGARGIGLATARALAALGARVAIGDLDE-------ALAKETAAELGLVVGGPLDVTD 61

Query: 70 LASVSSLADFIKTQFGKLDIL 90
           AS ++  D ++   G +D+L
Sbjct: 62 PASFAAFLDAVEADLGPIDVL 82

Length = 273

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M +   K AV+TG+  G G    R  A+ G+ +VL    +     AV +L+A G +   +
Sbjct: 1  MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE---V 57

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDIL 90
          L  + D+SD A V +LAD    +FG + +L
Sbjct: 58 LGVRTDVSDAAQVEALADAALERFGAVHLL 87

Length = 287

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
            K  ++TG++KGIG       A++G  + L ARD          L+A+ GVD  +   H
Sbjct: 6  AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAV---H 62

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
           LD+S   +   LA     + G +DIL
Sbjct: 63 ALDLSSPEAREQLA----AEAGDIDIL 85

Length = 259

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 63/262 (24%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG+++GIG     +LA++G  + +    D+ +  E V ++ A+G       + Q DI
Sbjct: 4   AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAI---YFQADI 60

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEV------DWSKVCYQTYELAVEC-LKTNYYG 120
            +L+   +L D     FG+LD L   +A +      D   +   +++  +   L+  ++ 
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVN-NAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 121 TKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
           T+     ++   +  D P   ++ ++S ++A    P +                      
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTS-INAYLVSPNRGE-------------------- 158

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDIN 236
                                Y +SKA ++  TR+LA R       V+ + PG + TD+ 
Sbjct: 159 ---------------------YCISKAGLSMATRLLAYRLADEGIAVHEIRPGLIHTDM- 196

Query: 237 FHAGILSVEEGAESPVKLALLP 258
                  V+E  +  +   L+P
Sbjct: 197 ----TAPVKEKYDELIAAGLVP 214

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 63/233 (27%), Positives = 86/233 (36%), Gaps = 53/233 (22%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           V+TG+  GIG  T   L   G TV+    D +                        D+S 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI--GIDLREA------------------DVIADLST 42

Query: 70  LASVSSL-ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
               ++  AD +    G LD L      V+ + V   T  +A   LK NY+G +   EAL
Sbjct: 43  PEGRAAAIADVLARCSGVLDGL------VNCAGVGGTT--VAGLVLKVNYFGLRALMEAL 94

Query: 129 IPLLELSDSPRLVNLSSYVSA--LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           +P L     P  V +SS   A   +D  E A+A+       TE R               
Sbjct: 95  LPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAG----TEAR-------------AV 137

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC----VNCVCPGFVKTDI 235
            +A     P   AY  SK  +  +TR  A     +     VN V PG V+T I
Sbjct: 138 ALAEHAGQPGYLAYAGSKEALTVWTRRRA-ATWLYGAGVRVNTVAPGPVETPI 189

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 61/230 (26%), Positives = 87/230 (37%), Gaps = 52/230 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG+ +GIG      L ++G  VVL   D +RG       K +    E   F  +D
Sbjct: 11  RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG------SKVAKALGENAWFIAMD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D A V++    +  QFG+LD L    A  D                         T E
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIAD---------------------PHNTTLE 103

Query: 127 ALIPLLELSDSPRL--VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
           +    L L+   R+  VNL+  +   K      RA  G + NL   R             
Sbjct: 104 S----LSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTR------------- 146

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT 233
                 R   P + AY  SK  + A T  LA    P+  VN V PG++  
Sbjct: 147 -----ARQSEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDA 191

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A+VTG+  GIG      LA +G +VV+   + +      +++ A G      
Sbjct: 1  MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA--- 57

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDIL 90
          +  Q+D+SD  S  ++AD   + FG +D L
Sbjct: 58 IAVQVDVSDPDSAKAMADATVSAFGGIDYL 87

Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 65/275 (23%), Positives = 97/275 (35%), Gaps = 77/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T R  A  G  VV+   D+  G +AV    A+ +    + F   D
Sbjct: 5   KVAIITGGASGIGEATARLFAKHGARVVIADIDDDAG-QAV----AAELGDPDISFVHCD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEV--------------DWSKVCYQTYELAVE 112
           ++  A V +  D    +FG+LDI+   +A V              ++ +V      L V 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMF-NNAGVLGAPCYSILETSLEEFERV------LDVN 112

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +   + GTK     +IP    +    +V+++S              V+G          
Sbjct: 113 -VYGAFLGTKHAARVMIP----AKKGSIVSVASVAG-----------VVG---------- 146

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGF 230
                              G  PH  AY  SK  +   TR  A    +    VNCV P  
Sbjct: 147 -------------------GLGPH--AYTASKHAVLGLTRSAATELGEHGIRVNCVSPYG 185

Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDGGPTGR 265
           V T +      +  E   E+    A L   G   R
Sbjct: 186 VATPLLTAGFGVEDEAIEEAVRGAANL--KGTALR 218

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           +VTG+ +GIG+   R LA  G  V    R+ ++ LE V  L+  G        ++LD++
Sbjct: 1  VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFAT---YKLDVA 57

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
          D A+V  +   ++ ++G +D+L
Sbjct: 58 DSAAVDEVVQRLEREYGPIDVL 79

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA--SGVDPE 58
          M     + A+VTG++ GIG    R L   G+ VV  AR     ++ +E L A        
Sbjct: 1  MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARR----VDKIEALAAECQSAGYP 56

Query: 59 LLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
           L  +Q D+S+   + S+   I+TQ   +D+ 
Sbjct: 57 TLFPYQCDLSNEEQILSMFSAIRTQHQGVDVC 88

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 68/252 (26%), Positives = 91/252 (36%), Gaps = 85/252 (33%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQLDIS 68
           VTG+  GIG E     A  G TV+L  R E++ LEAV  E   A G  P ++        
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEK-LEAVYDEIEAAGGPQPAIIPL------ 69

Query: 69  DLASVSS-----LADFIKTQFGKLD-------ILTKGD-------AEVDWSKVCYQTYEL 109
           DL + +      LAD I+ QFG+LD       +L  G+           W  V       
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLL--GELGPMEQQDPEVWQDV------- 120

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
               ++ N   T    +AL+PLL  S +  LV  SS V        + RA          
Sbjct: 121 ----MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR------QGRA---------- 160

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC 227
                                  W     AY VSK       ++LA  Y      VNC+ 
Sbjct: 161 ----------------------NW----GAYAVSKFATEGMMQVLADEYQGTNLRVNCIN 194

Query: 228 PGFVKTDINFHA 239
           PG  +T +   A
Sbjct: 195 PGGTRTAMRASA 206

Length = 247

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 73/244 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+++G+G    R  A +G  VV+   +  R  E+ E + A   +  + +  Q D
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEAGERAIAI--QAD 55

Query: 67  ISDLASVSSLADFIKTQFGKLDILT--------------KGDAEVDWSKVCYQT-YELAV 111
           + D   V ++ +  K  FG +D +               K    +DW    YQ   E AV
Sbjct: 56  VRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWED--YQQQLEGAV 113

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
           +       G     +A++P  +   S R++N+ +                    NL +  
Sbjct: 114 K-------GALNLLQAVLPDFKERGSGRVINIGT--------------------NLFQNP 146

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
              VV   + DY                    KA +  +TR +AK    +   VN V  G
Sbjct: 147 ---VV--PYHDYTTA-----------------KAALLGFTRNMAKELGPYGITVNMVSGG 184

Query: 230 FVKT 233
            +K 
Sbjct: 185 LLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 5/140 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG+ +GIG     +LA +G  V+L  R E    E + ++ A+G   +    H  D
Sbjct: 5   KVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAG---DAAHVHTAD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTC 125
           +   A    +      +FG++D+L        W+K      E  +E  ++ + + T   C
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 126 EALIPLLELSDSPRLVNLSS 145
            A++P +       +VN+SS
Sbjct: 121 RAVLPHMLERQQGVIVNVSS 140

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A++TG++ GIG    +  A +G  VV+ AR +    + V +++A G +    
Sbjct: 1  MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEA--- 57

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDI 89
          +    D+ D A   +L      +FG LDI
Sbjct: 58 VALAGDVRDEAYAKALVALAVERFGGLDI 86

Length = 254

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 50/232 (21%), Positives = 74/232 (31%), Gaps = 49/232 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K   +TG   G+G  T   LA++G  V L  R      + +  + A  +         +D
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALR-----IGGID 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D  +     D +  QFG+LD L        W  +     +        N   T    +
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A +P L  S   R+VN+ +  +ALK                                   
Sbjct: 123 AALPALTASGGGRIVNIGA-GAALK----------------------------------- 146

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDIN 236
             A  G      AY  +KA +   T  LA         VN V P  + T  N
Sbjct: 147 --AGPGM----GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN 192

Length = 239

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG  +GIG     +LA  G  V +   +E+   E  +++  +G      + ++LD
Sbjct: 1  KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKA---VAYKLD 57

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +SD   V S  D    +FG  D++
Sbjct: 58 VSDKDQVFSAIDQAAEKFGGFDVM 81

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          + A+VT S+ GIG      LA +G  + +T   DE+   E  E++++ GV  E+    QL
Sbjct: 3  QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEI---RQL 59

Query: 66 DISDLASVSSLADFIKTQFGKLDIL 90
          D+SDL   +   D +  + G++D+L
Sbjct: 60 DLSDLPEGAQALDKLIQRLGRIDVL 84

Length = 256

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 10  VVTGSNKGIGFETVRQLASK-GITVVLTAR-----DEKRGLEAVEKLKASGVDPELLLFH 63
           +VTG   GIG    R LA + G  +VL  R     +E+   + +  L+A G     +L+ 
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR---VLYI 265

Query: 64  QLDISDLASVSSLADFIKTQFGKLD 88
             D++D A+V  L + ++ ++G +D
Sbjct: 266 SADVTDAAAVRRLLEKVRERYGAID 290

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          AVVTG   G+G  TV +L ++G  VV+       G E V KL  +        F  +D++
Sbjct: 5  AVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKLGDNCR------FVPVDVT 57

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
              V +     K +FG+LDI+
Sbjct: 58 SEKDVKAALALAKAKFGRLDIV 79

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 8/87 (9%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
          K  ++ G  +N+ I +   + LA +G  +  T + E+  LE  VE+L A  +  +L+L  
Sbjct: 7  KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--LEKRVEEL-AEELGSDLVL-- 61

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
            D+++  S+ +L   IK ++GKLD L
Sbjct: 62 PCDVTNDESIDALFATIKKKWGKLDGL 88

Length = 259

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 48/231 (20%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG    R+L + G  V+ T         A +  +  G   + +   +L
Sbjct: 2   KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--AKDWFEEYGFTEDQVRLKEL 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQ-TYELAVECLKTNYYGTKQT 124
           D++D    +     I+ + G +DIL   +A +    V  + +++   + + TN       
Sbjct: 60  DVTDTEECAEALAEIEEEEGPVDILVN-NAGITRDSVFKRMSHQEWNDVINTNLNSVFNV 118

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            + L   +      R++N+SS V+ LK                                 
Sbjct: 119 TQPLFAAMCEQGYGRIINISS-VNGLK--------------------------------- 144

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
            G+          + Y  +KA +  +T+ LA    ++   VNC+ PG++ T
Sbjct: 145 -GQFGQ-------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFHQ 64
           K A++TG+ +GIG     +LA+ G  +VL   + +   ++  + +  +G +    +   
Sbjct: 2  SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYN---AVAVG 58

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++D   V +L D    +FG  D++
Sbjct: 59 ADVTDKDDVEALIDQAVEKFGSFDVM 84

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG+  GIG ET    A +G  VV +  DE       E ++A+G        +++D
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHA---YRVD 372

Query: 67  ISDLASVSSLADFIKTQFGKLDIL 90
           +SD  ++ + A++++ + G  DI+
Sbjct: 373 VSDADAMEAFAEWVRAEHGVPDIV 396

Length = 582

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 51/242 (21%), Positives = 88/242 (36%), Gaps = 66/242 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + G G    ++L S G TV+     +       ++L+   V  + L   QLD
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNG--PGAKELR--RVCSDRLRTLQLD 56

Query: 67  ISDLASVSSLADFIKTQFGKLD----------ILTKGDAEVDWSKVCYQTYELAVECLKT 116
           ++    +   A ++K   G+            +   GD E           +   +C++ 
Sbjct: 57  VTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEE--LL-----PMDDYRKCMEV 109

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N +GT +  +A +PLL  +   R+VN+SS              + G V            
Sbjct: 110 NLFGTVEVTKAFLPLLRRAKG-RVVNVSS--------------MGGRVPF---------- 144

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTD 234
                             P   AY  SKA + A++  L +    +   V+ + PG  KT 
Sbjct: 145 ------------------PAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTG 186

Query: 235 IN 236
           I 
Sbjct: 187 IT 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 57/228 (25%), Positives = 82/228 (35%), Gaps = 50/228 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG +        G  VV    DE+RG +  E        P L   H  D
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG-----PNLFFVH-GD 55

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D   V  +   +  + G++D+L    A                        G+K    
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAA-----------------------RGSKGILS 92

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           +L  LLE  D    VNL+      +   ++     G + N+   R             + 
Sbjct: 93  SL--LLEEWDRILSVNLTGPYELSRYCRDELIKNKGRIINIASTRA-----------FQS 139

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT 233
           E       P S AY  SK  + A T  LA    P   VNC+ PG++ T
Sbjct: 140 E-------PDSEAYAASKGGLVALTHALAMSLGPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 11/86 (12%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          T +  +VTG  +GIG    R   + G TVV+  R                VD     FH 
Sbjct: 5  TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA-----------PETVDGRPAEFHA 53

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+ D   V++L D I  + G+LD+L
Sbjct: 54 ADVRDPDQVAALVDAIVERHGRLDVL 79

Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 57/234 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A++TG  +GIG         +G  V VL    E    E    L+  GV        + 
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKE----LREKGV-----FTIKC 58

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTY--ELAVECLKTNYYGTKQ 123
           D+ +   V    + ++ +FG++D+L   +A +    + ++ +  E   + +K N  G   
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVN-NAGI-MYLMPFEEFDEEKYNKMIKINLNGAIY 116

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
           T    +PLL+LS +  +VN++S             A +G                     
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIAS------------NAGIG--------------------- 143

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI 235
                A  G    ++ Y ++KA I   TR LA    K+   VN V PG+V+TD+
Sbjct: 144 ----TAAEG----TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 7   KYAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VT +   GIG  T R+   +G  VV++   E+R  E  ++L A        +   +
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE--LGLGRVEAVV 75

Query: 66  -DISDLASVSSLADFIKTQFGKLDILTK-----GDAEV------DWSKV 102
            D++  A V +L D    + G+LD+L       G   V      +WS+V
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRV 124

Length = 262

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 18/147 (12%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             K+  ++TG + GIG    R L S G  V  T R E    E V  L+A G++       
Sbjct: 2   DMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEA-----F 52

Query: 64  QLDISDLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLK----TNY 118
           QLD ++  S+++L   +     G+LD L    A      V     +L  E L+     N+
Sbjct: 53  QLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAV----EDLPTEALRAQFEANF 108

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSS 145
           +G       +IP++      R+V  SS
Sbjct: 109 FGWHDLTRRVIPVMRKQGQGRIVQCSS 135

Length = 277

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 58/288 (20%), Positives = 96/288 (33%), Gaps = 69/288 (23%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG ++GIG   V +L  +G  V+     E      V+  K         
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-DVDYFK--------- 50

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
               +D+S+   V    D++ +++G++DIL        +  +     +     +  N  G
Sbjct: 51  ----VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNG 106

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
                +  IP +   D   ++N++S  S                                
Sbjct: 107 IFLMSKYTIPYMLKQDKGVIINIASVQS-------------------------------- 134

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA 239
                     R    +++AY  SK  +   TR +A  Y P      VCPG ++T +   A
Sbjct: 135 ------FAVTR----NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWA 184

Query: 240 GILSV------------EEGAESPVKLALLPDGGPTGRFFLRKEEAPF 275
             L V            E G   P+K    P+       FL  + A F
Sbjct: 185 AELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASF 232

Length = 258

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  ++TG++ GIG  T R+ A  G  ++LT R  +R L+ +     +    ++L   QLD
Sbjct: 1  KTVLITGASSGIGEATARRFAKAGAKLILTGRRAER-LQELADELGAKFPVKVLPL-QLD 58

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +SD  S+ +  + +  +F  +DIL
Sbjct: 59 VSDRESIEAALENLPEEFRDIDIL 82

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+VTG+  GIG    R+L  +G+ V + AR E+     V++L+ +GV+ +       D+ 
Sbjct: 6  ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRT---CDVR 62

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
           +  + +L      ++G +D+L
Sbjct: 63 SVPEIEALVAAAVARYGPIDVL 84

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 7/104 (6%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+V G++ GIG  T  +LA+ G  V L AR  ++  E V+K++A G +    +   LD++
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEA---VAFPLDVT 69

Query: 69  DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE 112
           D  SV S     +   G++++L  G  +  + K+    +E++ E
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKL----HEISTE 109

Length = 274

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          +K  ++TG + G+G    ++ A +G  VV+T R +++  EA  +++     P  +L  Q+
Sbjct: 1  EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ---FPGQVLTVQM 57

Query: 66 DISDLASVSSLADFIKTQFGKLDIL 90
          D+ +   V  + + I  +FG++D L
Sbjct: 58 DVRNPEDVQKMVEQIDEKFGRIDAL 82

Length = 252

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG+  GIG  T    A++G  V     +E      +  L A  +         LD++D 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINE----AGLAALAAE-LGAGNAWTGALDVTDR 60

Query: 71  ASVS-SLADFIKTQFGKLD-------ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTK 122
           A+   +LADF     G+LD       IL  G  E           E     +  N  G  
Sbjct: 61  AAWDAALADFAAATGGRLDVLFNNAGILRGGPFE-------DIPLEAHDRVIDINVKGVL 113

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 157
               A +P L+ +   R++N SS  SA+   P  A
Sbjct: 114 NGAHAALPYLKATPGARVINTSS-ASAIYGQPGLA 147

Length = 260

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 5/136 (3%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG++ GIG      LA+ G  ++L  R+     E +E L A    P    +   D++ 
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRWVVADLTS 64

Query: 70  LASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI 129
            A   ++    + + G +++L        ++ +  Q  E     L  N     Q   AL+
Sbjct: 65  EAGREAVLARAR-EMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALL 123

Query: 130 PLLELSDSPRLVNLSS 145
           PLL    S  +VN+ S
Sbjct: 124 PLLRAQPSAMVVNVGS 139

Length = 263

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 48.7 bits (116), Expect = 8e-07
 Identities = 61/238 (25%), Positives = 88/238 (36%), Gaps = 49/238 (20%)

Query: 1   MAEATK---KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP 57
           MA   +   K  +VTG ++GIG   VR     G  VV  AR E  G     +L  +G  P
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAG--P 58

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTN 117
               F   D++    + +L      +FG++D L        W      T E + +  +  
Sbjct: 59  GSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVN---NAGWHPPHQTTDETSAQEFRD- 114

Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
                        LL L       NL SY  A K      R   G++ NL+     +V  
Sbjct: 115 -------------LLNL-------NLISYFLASKYALPHLRKSQGNIINLS----SLV-- 148

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
                   G I  +   P    Y  +K  I A T+ LA    ++   VNC+ PG + T
Sbjct: 149 --------GSIGQKQAAP----YVATKGAITAMTKALAVDESRYGVRVNCISPGNIWT 194

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 36/161 (22%), Positives = 52/161 (32%), Gaps = 35/161 (21%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGVDP 57
           +        +VTG   GIG       A  G  V +    E         +   K +    
Sbjct: 6   LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATV- 64

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDIL---------TKGDAEV---DWSKVCYQ 105
                   D++D A V  + D    +FG LD+L         T G  E+    W +    
Sbjct: 65  -------ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQT--- 114

Query: 106 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPR-LVNLSS 145
                   L  N  G      A +PLL+ S     ++ LSS
Sbjct: 115 --------LAVNLNGQFYFARAAVPLLKASGHGGVIIALSS 147

Length = 264

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 53/228 (23%), Positives = 78/228 (34%), Gaps = 49/228 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQL 65
             A+VTG+ K IG      LA++G  VV+     E       ++L A      L+   Q 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLV---QA 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECL-KTNYYGTKQT 124
           D+SD A+ + L       FG+ D+L   +A   +     Q  E A   L   N       
Sbjct: 58  DLSDFAACADLVAAAFRAFGRCDVLVN-NASAFYPTPLGQGSEDAWAELFGIN------- 109

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
                P L +    R             L        G + N+ +   +  +  YF    
Sbjct: 110 --LKAPYLLIQAFARR------------LAGSRN---GSIINIIDAMTDRPLTGYF---- 148

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFV 231
                         AY +SKA +   TR  A    P   VN + PG +
Sbjct: 149 --------------AYCMSKAALEGLTRSAALELAPNIRVNGIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++TG  +++ I +   + L   G  +  T + E      VEKL     +  L+L   
Sbjct: 2  KRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKR-VEKLAERLGESALVL--P 58

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+S+   +  L   +K  +GKLD L
Sbjct: 59 CDVSNDEEIKELFAEVKKDWGKLDGL 84

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 57/268 (21%), Positives = 93/268 (34%), Gaps = 73/268 (27%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVV---LTARDEKRGLEAVEKL--KASGVDPELLLFH 63
           A+VTG   GIG      LA  G +VV   L +   +    A+++   +A G+        
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGL-------- 53

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTK----GDAEVDWSKVCYQTYELAVECLKTNYY 119
           + +++    + ++     +QFG + IL      G  +     +  + +E A +    + +
Sbjct: 54  ECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAF 113

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
              Q C    P ++ +    ++N+SS  S  K+                           
Sbjct: 114 RLSQLC---APHMQKAGGGAILNISSMSSENKN--------------------------- 143

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF 237
                             +AY  SKA +N  TR LA         VN V PG VKTD   
Sbjct: 144 ---------------VRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPGAVKTDALA 188

Query: 238 HAGILSVEEGAESPVKLALLPDGGPTGR 265
                 +E         A+L    P GR
Sbjct: 189 SVLTPEIER--------AMLKH-TPLGR 207

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG  KGIG  TV +L   G  VV TAR                  PE + F   D
Sbjct: 10 KRALVTGGTKGIGAATVARLLEAGARVVTTAR------------SRPDDLPEGVEFVAAD 57

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++     +++A  +  + G +DIL
Sbjct: 58 LTTAEGCAAVARAVLERLGGVDIL 81

Length = 260

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 56/263 (21%), Positives = 95/263 (36%), Gaps = 57/263 (21%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLF 62
           + K  +VTG+++G+G +  +  A+ G TV+L AR +K+ LE V    ++A   +P  + F
Sbjct: 5   SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK-LEKVYDAIVEAGHPEPFAIRF 63

Query: 63  HQLDISDLASVSSLADFIKTQF-GKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYG 120
             +   +       A  I     GKLD +          S + +QT    V   + N   
Sbjct: 64  DLMSAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVA 122

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
                 AL PL                  LK  P+ +   +G+    T +          
Sbjct: 123 PMGLTRALFPL------------------LKQSPDASVIFVGESHGETPK---------- 154

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA---KRYPKFCVNCVCPGFVKTD--I 235
                          +   +  SKA +N   ++ A   +R+     N + PG + +   I
Sbjct: 155 --------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI 200

Query: 236 NFHAGILSVEEGAESPVKLALLP 258
             H G    E  +E      +LP
Sbjct: 201 KSHPG----EAKSERKSYGDVLP 219

Length = 239

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
          M     K A++TG+  GIG     +  ++G  VV+      R   A  ++   A  V   
Sbjct: 1  MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAV--- 57

Query: 59 LLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
                LD++   S+  +      +FG +DIL
Sbjct: 58 -----SLDVTRQDSIDRIVAAAVERFGGIDIL 84

Length = 257

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 64/250 (25%), Positives = 90/250 (36%), Gaps = 90/250 (36%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL----TARDEKRGLEAV-EKLKASGVDPELLL 61
           K A+VTG+ +GIG      LA  G  VV      A +    L AV  ++  + +      
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA---LAAVANRVGGTAL------ 261

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDI------------LTKGDAEVDWSKVCYQTYEL 109
              LDI+   + + +A+ +  + G LDI            L   D    W  V      L
Sbjct: 262 --ALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEA-RWDSV------L 312

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
           AV     N     +  EAL+    L D  R+V +SS +S                     
Sbjct: 313 AV-----NLLAPLRITEALLAAGALGDGGRIVGVSS-ISG-------------------- 346

Query: 170 ERIEMVVKDYFKDYEEGEIA-NRGWCPHSSAYKVSKA-VI---NAYTRILAKRYPKFCVN 224
                             IA NRG     + Y  SKA VI    A   +LA+R     +N
Sbjct: 347 ------------------IAGNRG----QTNYAASKAGVIGLVQALAPLLAER--GITIN 382

Query: 225 CVCPGFVKTD 234
            V PGF++T 
Sbjct: 383 AVAPGFIETQ 392

Length = 450

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  +VTG   GIG     +LA +G   V+  R      E  E+L+A     E   F Q+D
Sbjct: 8  KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAE---FVQVD 63

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D A      +    +FG++D L
Sbjct: 64 LTDDAQCRDAVEQTVAKFGRIDGL 87

Length = 258

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDI 67
           AV+TG   GIG  T  + A +G  VVL   D K GL  AV  L+A G D   ++    D+
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVLGDVD-KPGLRQAVNHLRAEGFDVHGVM---CDV 64

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
                V+ LAD      G +D++      V    +   T++     +  + +G+  T EA
Sbjct: 65  RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124

Query: 128 LIP-LLE 133
            +P LLE
Sbjct: 125 FLPRLLE 131

Length = 275

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  V+TG  +G+G      LA KG  + L   ++++  EAV +  A G +   +  +  +
Sbjct: 6  KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE---VRGYAAN 62

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D   V +    I   FG+L+ L
Sbjct: 63 VTDEEDVEATFAQIAEDFGQLNGL 86

Length = 253

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 60/202 (29%)

Query: 54  GVD---PELLL--FHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVC 103
           GVD   P + L  F Q D+ D AS+ +    +    G++D L       G A V+     
Sbjct: 14  GVDRREPGMTLDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGTAPVE----- 65

Query: 104 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 163
                  V   + N+ G +   EAL+P +    +  +VN++S   A  + P++       
Sbjct: 66  ------LV--ARVNFLGLRHLTEALLPRMAPGGA--IVNVASLAGA--EWPQRLELHKAL 113

Query: 164 VENLTEERIEMVVKDYFKDYEEGEIANRGWC-----PHSSAYKVSKAVINAYTRILAKRY 218
                              ++EG      W        ++ Y++SK  +  +T  + +  
Sbjct: 114 AAT--------------ASFDEG----AAWLAAHPVALATGYQLSKEALILWT--MRQAQ 153

Query: 219 PKFC-----VNCVCPGFVKTDI 235
           P F      VNCV PG V T I
Sbjct: 154 PWFGARGIRVNCVAPGPVFTPI 175

Length = 241

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 54/235 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG   GIG    ++LA  G  V      +E+R    +++  A G D  ++   + 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVV---EG 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQ-TYELAVECLKTNYYGTKQT 124
           D+S   S  +    ++ + G +D+L   +A +       + TYE     + TN       
Sbjct: 58  DVSSFESCKAAVAKVEAELGPIDVLVN-NAGITRDATFKKMTYEQWSAVIDTNLNSVFNV 116

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            + +I  +      R++N+SS V+  K                                 
Sbjct: 117 TQPVIDGMRERGWGRIINISS-VNGQK--------------------------------- 142

Query: 185 EGEI--ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI 235
            G+    N         Y  +KA +  +T+ LA+        VN + PG++ TD+
Sbjct: 143 -GQFGQTN---------YSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K AV+TG    +G    ++LA  G  V +  R++++    V ++KA+G +    L  + D
Sbjct: 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEA---LAVKAD 67

Query: 67 ISDLASVSSLADFIKTQFGKLDILTKG 93
          + D  S+      I   FG  DIL  G
Sbjct: 68 VLDKESLEQARQQILEDFGPCDILING 94

Length = 278

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL--EAVEKLKASGVDPELLLFHQ 64
           K  VVTG+ +GIG     + A++G  VVL  R E   L  E   +L+A+G +   L    
Sbjct: 9   KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE---LVHEVAAELRAAGGEALAL---- 61

Query: 65  LDISDL---ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELA-VEC-LKTNYY 119
              +DL   A   +        FG++D+L        W+K  ++ YE   +E  ++ + +
Sbjct: 62  --TADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKP-FEEYEEEQIEAEIRRSLF 118

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSS 145
            T   C A++P +       +VN+SS
Sbjct: 119 PTLWCCRAVLPHMLAQGGGAIVNVSS 144

Length = 260

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 4e-06
 Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 19/146 (13%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKA-SGVDPELLLFHQ 64
           K  ++ G+   I     R+ A+ G  + L ARD +R LE +   L+A   V       H+
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVER-LERLADDLRARGAVAVST---HE 57

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
           LDI D A   S A F+ +     DI+     T GD        C     LA+   +TN+ 
Sbjct: 58  LDILDTA---SHAAFLDSLPALPDIVLIAVGTLGD-----QAACEADPALALREFRTNFE 109

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSS 145
           G       L    E   S  +V +SS
Sbjct: 110 GPIALLTLLANRFEARGSGTIVGISS 135

Length = 243

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG++ GIGF   +  A  G T+V    +++   + +   +  G++    +    D
Sbjct: 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC---D 67

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D   V ++   I+ + G +DIL
Sbjct: 68 VTDEDGVQAMVSQIEKEVGVIDIL 91

Length = 265

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  ++TGS +GIGF     LA  G  +++     +R   AV KL+  G+      F   +
Sbjct: 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF---N 66

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++    V +  + I+   G +D+L
Sbjct: 67 VTHKQEVEAAIEHIEKDIGPIDVL 90

Length = 254

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M+    K AVVTG+  GIG E   +LA  G  V +   ++       +++  +G      
Sbjct: 2  MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK---A 58

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDIL 90
          +   +D+++  +V++  D +  +FG +DIL
Sbjct: 59 IGVAMDVTNEDAVNAGIDKVAERFGSVDIL 88

Length = 262

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 71/241 (29%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQLDIS 68
           +VTG+++GIG     +LA+ G  + +     +   E+ V  ++A G +  LL F   D++
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF---DVA 58

Query: 69  DLASVSSLADFIKTQFGKLD--ILTKG---DA------EVDWSKVCYQTYELAVECLKTN 117
           D  +  +L +    + G     +L  G   DA      E DW  V           + TN
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIV-----------IHTN 107

Query: 118 ---YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
              +Y     C   +P++      R++ L+S VS                          
Sbjct: 108 LDGFYNVIHPC--TMPMIRARQGGRIITLAS-VS-------------------------- 138

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD 234
                      G + NRG   +S+A         A    LAKR  K  VNC+ PG + T+
Sbjct: 139 -----------GVMGNRGQVNYSAAKAGLIGATKALAVELAKR--KITVNCIAPGLIDTE 185

Query: 235 I 235
           +
Sbjct: 186 M 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 52/244 (21%), Positives = 87/244 (35%), Gaps = 48/244 (19%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL- 59
           MA    +  ++TG + G+G     +LA+ G  V++      RG    + + A+G++    
Sbjct: 1   MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAV-AAGIEAAGG 59

Query: 60  -LLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNY 118
             L    D+ D A+  +  D    +FG+LDIL         +     + E   + +  N 
Sbjct: 60  KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNL 119

Query: 119 YGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
            G     +A + P++      R+VN++S                                
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIAS-------------------------------- 147

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI 235
                   G   NRG       Y  SKA +   T+ LA         VN V PG + T +
Sbjct: 148 ------VAGVRGNRGQVN----YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197

Query: 236 NFHA 239
             +A
Sbjct: 198 ADNA 201

Length = 249

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 11/158 (6%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VV+G   G+G     + A  G  VVL AR  +R  E   ++   G      L    D
Sbjct: 6   KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---ALAVPTD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEV----DWSKVCYQTYELAVECLKTNYYGTK 122
           I+D    ++L      +FG++D L      V      +   +  +   +E    N  GT 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIE---LNVLGTL 119

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 160
           +  +A  P L  S    +V ++S V         A  +
Sbjct: 120 RLTQAFTPALAESGGS-IVMINSMVLRHSQPKYGAYKM 156

Length = 258

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 16 KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSS 75
            I +   +  A +G  VVLT       + AV++L      P  ++   LD++    +  
Sbjct: 6  NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAK--ELPADVIP--LDVTSDEDIDE 61

Query: 76 LADFIKTQFGKLDIL 90
          L + +K   GK+D L
Sbjct: 62 LFEKVKEDGGKIDFL 76

Length = 239

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 73/246 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  V+TG + G+G     +   +   VV+  R DE+   +  E++K +G +   +   + 
Sbjct: 8   KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV---KG 64

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEV------------DWSKVCYQTYELAVEC 113
           D++  + V +L      +FG LD++   +A +            DW+KV           
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMIN-NAGIENAVPSHEMSLEDWNKV----------- 112

Query: 114 LKTNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
           + TN  G      EA+   +E      ++N+SS                        E+I
Sbjct: 113 INTNLTGAFLGSREAIKYFVEHDIKGNIINMSS----------------------VHEQI 150

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGF 230
                               W P    Y  SK  +   T  LA  Y      VN + PG 
Sbjct: 151 P-------------------W-PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGA 190

Query: 231 VKTDIN 236
           + T IN
Sbjct: 191 INTPIN 196

Length = 261

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA 52
           +AVVTG+  GIG     +LA +G  V+L +R +       EKL A
Sbjct: 2  TWAVVTGATDGIGKAYAEELAKRGFNVILISRTQ-------EKLDA 40

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 63/275 (22%), Positives = 104/275 (37%), Gaps = 88/275 (32%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH- 63
           T++  ++TG++ G+G    R+ A+KG  + L AR   R  + +E+LKA     ELL  + 
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCAR---R-TDRLEELKA-----ELLARYP 51

Query: 64  -------QLDISDLASVSSLADFIKTQFGKLD--I----------LTKGDAEVDWSKVCY 104
                   LD++D   V  +    + + G LD  I          L  G    +      
Sbjct: 52  GIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWAN-----K 106

Query: 105 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 164
            T E       TN+      CEA + +     S  LV +SS VSA++ LP          
Sbjct: 107 ATAE-------TNFVAALAQCEAAMEIFREQGSGHLVLISS-VSAVRGLPG--------- 149

Query: 165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FC 222
                                            +AY  SKA + +    L     K    
Sbjct: 150 -------------------------------VKAAYAASKAGVASLGEGLRAELAKTPIK 178

Query: 223 VNCVCPGFVKTDINFHAG----ILSVEEGAESPVK 253
           V+ + PG++++++N  A     ++  E G ++ VK
Sbjct: 179 VSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVK 213

Length = 248

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 10  VVTGSNKGIGFETVRQLASKGIT-VVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLD 66
           ++TG   G+G    R LA++G   +VL +R     R       L+A G    ++   + D
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVV---RCD 210

Query: 67  ISDLASVSSLAD 78
           ++D A++++L  
Sbjct: 211 VTDPAALAALLA 222

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 44.4 bits (106), Expect = 1e-05
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 10 VVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQL 65
          +VTG   G+G E  R LA +G   +VL +R           + +L+A G +   +     
Sbjct: 4  LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAE---VTVVAC 60

Query: 66 DISDLASVSSLADFIKTQFGKLD 88
          D+SD  +V +L   I+     L 
Sbjct: 61 DVSDRDAVRALLAEIRADGPPLR 83

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
          K A+VTG+++GIG     QL   G TV +T R     L    E+++A G     +   + 
Sbjct: 4  KIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV---RC 60

Query: 66 DISDLASVSSLADFI-KTQFGKLDIL 90
          D SD   V +L + + + Q G+LDIL
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDIL 86

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 58/233 (24%), Positives = 88/233 (37%), Gaps = 50/233 (21%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VT S  GIG    R+LA  G  VV+++R ++    AV  L+  G+     + H 
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHV 68

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTK 122
               D   + + A       G +DIL   +A V+  +  +   T E+  + L  N   T 
Sbjct: 69  GKAEDRERLVATA---VNLHGGVDILVS-NAAVNPFFGNILDSTEEVWDKILDVNVKATA 124

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
              +A++P +E      +V +SS V+A    P                            
Sbjct: 125 LMTKAVVPEMEKRGGGSVVIVSS-VAAFHPFP---------------------------- 155

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
                    G  P    Y VSK  +   T+ LA         VNC+ PG +KT
Sbjct: 156 ---------GLGP----YNVSKTALLGLTKNLAPELAPRNIRVNCLAPGLIKT 195

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 55/228 (24%), Positives = 87/228 (38%), Gaps = 38/228 (16%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K   ++TG++ G+G    + LA+ G   V++  RD  +  +A + L   G+  +      
Sbjct: 3   KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL---GMPKDSYTIMH 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDA-------EVDWSKVCYQTYELAVECLKTN 117
           LD+  L SV       +     LD L    A       E  ++      +EL+V    TN
Sbjct: 60  LDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTA---DGFELSV---GTN 113

Query: 118 YYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA--RAVLGDVENLT---EE 170
           + G    C  L+  L+ S     RL+ + S       L      +A LGD+  L    + 
Sbjct: 114 HLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKA 173

Query: 171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 218
            I M+    FK               + AYK SK       R L +R+
Sbjct: 174 PIAMIDGKEFKG--------------AKAYKDSKVCNMLTVRELHRRF 207

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           +VTG+ +GIG    R L   G TV   A D    L             + L    LD++
Sbjct: 1  VIVTGAAQGIGRAVARHLLQAGATV--IALDLPFVLLLEY--------GDPLRLTPLDVA 50

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
          D A+V  +   +  + G +D L
Sbjct: 51 DAAAVREVCSRLLAEHGPIDAL 72

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 51/175 (29%), Positives = 72/175 (41%), Gaps = 19/175 (10%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG   VR     G  V +    +  G    + L   G +P +  FH  D
Sbjct: 19  KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL---GGEPNVCFFH-CD 74

Query: 67  ISDLASVSSLADFIKTQFGKLDILTK-----GDAEVDWSKVCYQTYELAVEC-LKTNYYG 120
           ++    VS   DF   +FG LDI+       G    D   V    +E   +  +K  + G
Sbjct: 75  VTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLG 134

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA-----RAVLGDVENLTEE 170
            K     +IPL + S    +V+L S  SA+  L   A      AVLG   ++  E
Sbjct: 135 MKHAARIMIPLKKGS----IVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAE 185

Length = 280

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 57/250 (22%), Positives = 90/250 (36%), Gaps = 64/250 (25%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFH 63
           K+ A++ G+++G+G   V +L  +G  V  T R  ++   L+A+      GV  E     
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALP-----GVHIE----- 50

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNY 118
           +LD++D AS+  L   ++ Q  + D+L       G A    +       E+  +   TN 
Sbjct: 51  KLDMNDPASLDQLLQRLQGQ--RFDLLFVNAGISGPAHQSAADA--TAAEIG-QLFLTNA 105

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
               +    L+  +       L  +SS               LG VE             
Sbjct: 106 IAPIRLARRLLGQVR-PGQGVLAFMSS--------------QLGSVE------------- 137

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN 236
                                YK SKA +N+ TR        P   V  + PG+VKTD+ 
Sbjct: 138 ------------LPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG 185

Query: 237 FHAGILSVEE 246
                L VE 
Sbjct: 186 GDNAPLDVET 195

Length = 225

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  ++TG   G+G  T  +LA +G  + L   +E+ GLEA +           +L  +
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEE-GLEAAKAALLEIAPDAEVLLIK 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTNYYGTK 122
            D+SD A V +  D    QFG++D     +A ++  +   + +      + +  N  G  
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFN-NAGIEGKQNLTEDFGADEFDKVVSINLRGVF 119

Query: 123 QTCEALIPLLELSDSPRLVNLSS 145
              E ++ ++    S  +VN +S
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTAS 142

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG   GIG    ++    G TV++  R+E+R L   +        PE+      D++D 
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNEER-LAEAKAEN-----PEIHTE-VCDVADR 62

Query: 71  ASVSSLADFIKTQFGKLDILTKG---DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
            S   L +++K ++  L++L          D +       + A + + TN     +    
Sbjct: 63  DSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGA-EDLLDDAEQEIATNLLAPIRLTAL 121

Query: 128 LIPLLELSDSPRLVNLSS 145
           L+P L       ++N+SS
Sbjct: 122 LLPHLLRQPEATIINVSS 139

Length = 245

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 28/169 (16%)

Query: 1   MAEATKKYAVVTG--SNKGIGFETVRQLASKGITVVLT------ARDEKRGLEAVEKLKA 52
           M + T K A+VTG  +N+ I +   +QL + G  + +T       R EK+  E  E L  
Sbjct: 1   MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP 60

Query: 53  SGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILT-------KGDAEVDWSKVCYQ 105
           S       LF   D+ D A +    + IK ++GKLDIL        K +   D+S    +
Sbjct: 61  S-------LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSRE 113

Query: 106 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 154
            +  A+E    + Y     C+A  PL  +S+   +V L +Y+  ++ +P
Sbjct: 114 GFARALE---ISAYSLAPLCKAAKPL--MSEGGSIVTL-TYLGGVRAIP 156

Length = 258

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 10 VVTGSNKGIGFETVRQLASKGI-TVVLTAR---DEKRGLEAVEKLKASGVDPELLLFHQL 65
          ++TG   G+G    R LA +G   +VL +R   D       + +L+A+G    +      
Sbjct: 4  LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTV---VAC 60

Query: 66 DISDLASVSSLADFIKTQFGKLD 88
          D++D  +++++   I    G L 
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLT 83

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTG+ +GIGF   ++L   G  V +   +E+    A +KL   G     +   +
Sbjct: 1  MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAV---K 57

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+SD   V +    +   FG L+++
Sbjct: 58 ADVSDRDQVFAAVRQVVDTFGDLNVV 83

Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR---DEKRGLEA-VEKLKASGVD 56
          M   + K A++TG  + IG    R L + G  V +       E   L A +  L+     
Sbjct: 1  MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSA- 59

Query: 57 PELLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
                 Q D+ D  ++  L       FG+LD L
Sbjct: 60 ----AALQADLLDPDALPELVAACVAAFGRLDAL 89

Length = 249

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 12/84 (14%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  +VTG + GIG   V++L + G  VV               +       E   F   D
Sbjct: 10 KIIIVTGGSSGIGLAIVKELLANGANVV------------NADIHGGDGQHENYQFVPTD 57

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +S    V+     I  +FG++D L
Sbjct: 58 VSSAEEVNHTVAEIIEKFGRIDGL 81

Length = 266

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 60/268 (22%), Positives = 90/268 (33%), Gaps = 88/268 (32%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E   K  ++TG+  GIG    R   ++G  V         G++  +K   SG       F
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQDKPDLSGN----FHF 49

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL--TKG--DA--------EVDWSKVCYQTYELA 110
            QLD+SD   +  L D++      +DIL  T G  D           +W  +        
Sbjct: 50  LQLDLSD--DLEPLFDWV----PSVDILCNTAGILDDYKPLLDTSLEEWQHI-------- 95

Query: 111 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEE 170
                TN   T     A +P +    S  ++N+ S                         
Sbjct: 96  ---FDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIA----------------------- 129

Query: 171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCP 228
                            +A  G     +AY  SK  +  +T+ LA  Y K    V  + P
Sbjct: 130 ---------------SFVAGGG----GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAP 170

Query: 229 GFVKTDIN---FHAGILSVEEGAESPVK 253
           G VKT +    F  G L+     E+P+K
Sbjct: 171 GAVKTPMTAADFEPGGLADWVARETPIK 198

Length = 235

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 22/149 (14%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            +K   +TG+++G G         +G  VV TARD     +  EK        + LL   
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY------GDRLLPLA 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTK--GDA------EVDWSKVCYQTYELAVECLKT 116
           LD++D A+V +  +     FG+LDI+    G        EV  S+   Q        + T
Sbjct: 56  LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQ--------IDT 107

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSS 145
           N++G     +A++P L    S  ++ +SS
Sbjct: 108 NFFGALWVTQAVLPYLREQRSGHIIQISS 136

Length = 275

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 21/175 (12%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
            +TG++ GIG    R+ A +G T+ L AR   R  +A++   A       +  +  D+ D
Sbjct: 6   FITGASSGIGQALAREYARQGATLGLVAR---RT-DALQAFAARLPKAARVSVYAADVRD 61

Query: 70  LASVSSLA-DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTNYYGTKQTCE 126
             ++++ A DFI    G  D++   +A +    +  +  +LAV  E + TNY+G   T +
Sbjct: 62  ADALAAAAADFIA-AHGLPDVVI-ANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQ 119

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLP-------EKARAVLGDVENLTEERIEM 174
             I  +  +    LV ++S V+ ++ LP        KA A +  +E+L   R+E+
Sbjct: 120 PFIAPMRAARRGTLVGIAS-VAGVRGLPGAGAYSASKA-AAIKYLESL---RVEL 169

Length = 257

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          ++TG+ + IG      L ++G  V+++ R     ++ + +  A           Q D S 
Sbjct: 6  LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQC--------IQADFST 57

Query: 70 LASVSSLADFIKTQFGKLD 88
           A + +  D +K     L 
Sbjct: 58 NAGIMAFIDELKQHTDGLR 76

Length = 236

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 56/245 (22%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPEL 59
           M     K A+VTG+++GIG     +LA+ G  V +   R+++   E + +++++G    L
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFL 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQF------GKLDILTKGDAEVDWSKVCYQTYELAVEC 113
           +   + D++ +  V  L + +K +        ++DIL           +   T E+  E 
Sbjct: 61  I---EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI 117

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           +  N        +  +PLL      R++N+SS           A   LG   ++      
Sbjct: 118 MAVNIKAPFFLIQQTLPLLRAEG--RVINISS-----------AEVRLGFTGSI------ 158

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFV 231
                                    AY +SK  +N  T  LAK   +    VN + PG+ 
Sbjct: 159 -------------------------AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT 193

Query: 232 KTDIN 236
           KTDIN
Sbjct: 194 KTDIN 198

Length = 254

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            A+VTG ++GIG  T   LA +G TV V   ++     E V  +  +G    +L   Q 
Sbjct: 2  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL---QA 58

Query: 66 DISDLASVSSLADFIKTQFGKLDIL 90
          DISD   V ++   I      L  L
Sbjct: 59 DISDENQVVAMFTAIDQHDEPLAAL 83

Length = 247

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 50/230 (21%), Positives = 85/230 (36%), Gaps = 53/230 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG ++GIG    +     G  V+++AR  +   +A E+L A G      +    D
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGE----CIAIPAD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE-CLKTNYYGTKQTC 125
           +S    + +L   +  +  +LD+L   +A   W        E   +  +  N        
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVN-NAGATWGAPLEAFPESGWDKVMDINVKSVFFLT 121

Query: 126 EALIPLLELS----DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
           +AL+PLL  +    +  R++N+ S                          I  +V    +
Sbjct: 122 QALLPLLRAAATAENPARVINIGS--------------------------IAGIVVSGLE 155

Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPG 229
           +Y               +Y  SKA ++  TR LAK        VN + PG
Sbjct: 156 NY---------------SYGASKAAVHQLTRKLAKELAGEHITVNAIAPG 190

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 18/108 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+N G+G      LA  G  +V   R E     + VE L          L    
Sbjct: 6   KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRR------FLSLTA 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILT-------KGDA----EVDWSKV 102
           D+SD+ ++ +L D    +FG +DIL        + DA    E DW  V
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDV 107

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 62/250 (24%), Positives = 90/250 (36%), Gaps = 72/250 (28%)

Query: 5   TKKYAVVTGSNK--GIGFETVRQLASKGITVVLT---ARDEK-----RGLEAV---EKLK 51
            KK A+VTG+++  GIG    R+LA+KGI +  T     D+         E V   E+++
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE 63

Query: 52  ASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV 111
           + GV  E +   ++D+S   + + +   +  + G   IL    A                
Sbjct: 64  SYGVRCEHM---EIDLSQPYAPNRVFYAVSERLGDPSILINNAA---------------- 104

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVN------LSSYVSALKDLPEKARAVLGDVE 165
                  Y T    E L    E  D    VN      LSS  +   D     R +     
Sbjct: 105 -------YSTHTRLEELTA--EQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRII----- 150

Query: 166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 223
           NLT                 G+    G  P   AY  +K  I A+T+ LA    +    V
Sbjct: 151 NLT----------------SGQS--LGPMPDELAYAATKGAIEAFTKSLAPELAEKGITV 192

Query: 224 NCVCPGFVKT 233
           N V PG   T
Sbjct: 193 NAVNPGPTDT 202

Length = 256

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          +Y ++TG+++G+G     QL  KG  V+  +R E + L  + +   S      L FH LD
Sbjct: 2  RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSN-----LTFHSLD 56

Query: 67 ISDLASVSSL 76
          + D+  + + 
Sbjct: 57 LQDVHELETN 66

Length = 251

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 56/259 (21%), Positives = 94/259 (36%), Gaps = 55/259 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A++TG + GIG       A +G  + +   DE       ++  +  GV   L+     
Sbjct: 47  KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLI---PG 103

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQT 124
           D+SD A      +    + G+LDIL    A       +   T E   +  KTN Y     
Sbjct: 104 DVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHM 163

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +A +P L+   +  ++N  S ++  +         L D                     
Sbjct: 164 TKAALPHLKQGSA--IINTGS-ITGYEGNET-----LID--------------------- 194

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDIN---FHA 239
                          Y  +K  I+A+TR LA+   +    VN V PG + T +    F  
Sbjct: 195 ---------------YSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE 239

Query: 240 GILSVEEGAESPVKLALLP 258
             +S + G+ +P++    P
Sbjct: 240 EKVS-QFGSNTPMQRPGQP 257

Length = 290

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           ++TG + GIG        + G  V  TAR      E VE L A+G         QLD++
Sbjct: 4  VLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGFTAV-----QLDVN 54

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
          D A+++ LA+ ++ + G LD+L
Sbjct: 55 DGAALARLAEELEAEHGGLDVL 76

Length = 274

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 45/229 (19%), Positives = 84/229 (36%), Gaps = 55/229 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++T + +GIG       A +G  V+ T  +E    E +++L+             LD
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIATDINE----EKLKELERGPGITTR----VLD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D   V++LA     + G++D+L      V    +     +     +  N        +
Sbjct: 55  VTDKEQVAALA----KEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++P +       ++N+SS  S++K +P                                
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVP-------------------------------- 138

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
              NR        Y  +KA +   T+ +A  + +     N +CPG V T
Sbjct: 139 ---NR------FVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 22/145 (15%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG++ G G     +L ++G  V  T R      +A++ LKA     + L   QLD++D 
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRR----PDALDDLKAR--YGDRLWVLQLDVTDS 60

Query: 71  ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC--------LKTNYYGTK 122
           A+V ++ D      G++D++         S   Y  +  A E         + TN  G+ 
Sbjct: 61  AAVRAVVDRAFAALGRIDVVV--------SNAGYGLFGAAEELSDAQIRRQIDTNLIGSI 112

Query: 123 QTCEALIPLLELSDSPRLVNLSSYV 147
           Q   A +P L      R+V +SS  
Sbjct: 113 QVIRAALPHLRRQGGGRIVQVSSEG 137

Length = 276

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  VV G   GI     +  A  G  V + +R +++   AV +L+ +G  PE L     D
Sbjct: 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG--PEGLGV-SAD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILTKGDA 95
          + D A+V +    I  +FG +D+L  G A
Sbjct: 67 VRDYAAVEAAFAQIADEFGPIDVLVSGAA 95

Length = 264

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK--LKASGVDPEL 59
               ++ A VTG   GIG ET R+LA++G  VVL   + +   EAV        G    +
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEA-AEAVAAEINGQFGAGRAV 468

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
            L  ++D++D  +V +    +   +G +DI+
Sbjct: 469 AL--KMDVTDEQAVKAAFADVALAYGGVDIV 497

Length = 676

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQL 65
           K A  T S+KGIGF   R LA  G  V+L +R+E+   +A EK+K+ S VD   +     
Sbjct: 9   KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYI----- 63

Query: 66  DISDLASVSSLADFIK--TQFGKLDIL---TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
            ++DL     L   +K     G+ DI    T G     + ++  + +E AV+ L    Y 
Sbjct: 64  -VADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLL---LYP 119

Query: 121 TKQTCEALIPLLELSDSPRLVNLSS 145
                 AL+P +E     R++  +S
Sbjct: 120 AVYLTRALVPAMERKGFGRIIYSTS 144

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A V G+  G+G    R+ A++G +V L AR E + LEA+                  D  
Sbjct: 2  AAVVGAGDGLGAAIARRFAAEGFSVALAARREAK-LEALLVDIIRDAGGSAKAV-PTDAR 59

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
          D   V +L D I+ + G L++L
Sbjct: 60 DEDEVIALFDLIEEEIGPLEVL 81

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 58/240 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG    ++LA+ G  V +   + K    E V +++++G     +     
Sbjct: 5   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI---GA 61

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           ++  L  V +L   +  +       TK D  ++ + +    +   +E     ++    + 
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF---IEETTEQFFDRMVSV 118

Query: 126 EALIP-------LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
            A  P       L  L D+ R++N+SS  +                      RI +    
Sbjct: 119 NAKAPFFIIQQALSRLRDNSRIINISSAAT----------------------RISL---- 152

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDIN 236
                           P   AY ++K  IN  T  LAK+       VN + PGF+KTD+N
Sbjct: 153 ----------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN 196

Length = 252

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
          +K  ++TG+++GIG  T    A +G  V L     +   EAV + ++  G +    L   
Sbjct: 2  RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEA---LAVA 58

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++D A V  L + +  + G+LD L
Sbjct: 59 ADVADEADVLRLFEAVDRELGRLDAL 84

Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 4  ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
          ++ K  ++TG + G G    +   + G  VV T R E     A    +A    P+  L  
Sbjct: 2  SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEAL--HPDRALAR 55

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
           LD++D  ++ ++    +  FG +D+L
Sbjct: 56 LLDVTDFDAIDAVVADAEATFGPIDVL 82

Length = 277

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG   GIG    ++LA++G  VV+   D     E  EK+  +       L  Q D
Sbjct: 2  KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDP----EIAEKVAEAAQGGPRALGVQCD 57

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++  A V S  +    +FG LDI+
Sbjct: 58 VTSEAQVQSAFEQAVLEFGGLDIV 81

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 30/156 (19%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++  +VTG ++G+G    R  A +G  VV+     +   +A E L     D  + L  Q 
Sbjct: 5   EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAIAL--QA 59

Query: 66  DISDLASVSSLADFIKTQFGK----------LDILTKGDA-----EVDWSKVCYQT-YEL 109
           D++D   V ++       FGK           D    GDA     ++ W    +Q   E 
Sbjct: 60  DVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWED--FQQQLEG 117

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
           +V+       G   T +A +P +      R++N+ +
Sbjct: 118 SVK-------GALNTIQAALPGMREQGFGRIINIGT 146

Length = 253

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
          K  ++TG+   IG   V+ +   G  V+    D++   E +E L K      + L   +L
Sbjct: 5  KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS--KKLSLVEL 62

Query: 66 DISDLASVSSLADFIKTQFGKLD 88
          DI+D  S+         ++GK+D
Sbjct: 63 DITDQESLEEFLSKSAEKYGKID 85

Length = 256

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPEL 59
          M     K  VVTGS +GIG     +LA +G  VV+ A+       E ++ +K +G +   
Sbjct: 1  MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG 60

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
          +L    D+S      +LA     ++G  DIL
Sbjct: 61 VL---ADVSTREGCETLAKATIDRYGVADIL 88

Length = 252

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTAR----DEKRGLEAVEKLKASGVDPELLLF 62
          K A+VTG N G+G      LA  G  +++T      DE R L  +EK            F
Sbjct: 16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRL--IEKEGRKVT------F 67

Query: 63 HQLDISDLASVSSLADFIKTQFGKLDIL 90
           Q+D++   S   +      +FGK+DIL
Sbjct: 68 VQVDLTKPESAEKVVKEALEEFGKIDIL 95

Length = 258

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 56/238 (23%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
           +++ A VTG   GIG    ++L   G  VV     +  R ++ +E  KA G D    +  
Sbjct: 2   SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD---FIAS 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDA---EVDWSKVCYQTYELAVECLKTNYYG 120
           + ++ D  S  +  D +K + G++D+L        +V + K+  + +   ++   T+ + 
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFN 118

Query: 121 -TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
            TKQ  + ++         R++N+SS                                  
Sbjct: 119 VTKQVIDGMVE----RGWGRIINISSV--------------------------------- 141

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
             + ++G+          + Y  +KA I+ +T  LA+        VN V PG++ TD+
Sbjct: 142 --NGQKGQFGQ-------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190

Length = 246

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVL----TARDEKRGLEAVEKLKASGVDPELLLF 62
          K  ++ G  K +G    R LA++G   V     +A  +    E V  +KA+G        
Sbjct: 9  KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF-- 66

Query: 63 HQLDISDLASVSSLADFIKTQFGKLDI 89
           Q D++  A+V  L D  K  FG+ DI
Sbjct: 67 -QADLTTAAAVEKLFDDAKAAFGRPDI 92

Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 24/165 (14%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL----------------TARDEKRGLEAVEKL 50
           K A +TG+ +G G     +LA++G  ++                 T  D       VE L
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEAL 63

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELA 110
                    +L  + D+ DLA V ++ +    QFG+LD++      + + +    + E  
Sbjct: 64  GRK------VLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQW 117

Query: 111 VECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLP 154
              L  N  G  +TC+A++P ++E  +   ++  SS V+ LK LP
Sbjct: 118 DTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSS-VAGLKALP 161

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 13/91 (14%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPEL 59
          M   T K  +V G ++GIG   VR+  + G  V  T    K   +A E+L   +G     
Sbjct: 1  MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK---DAAERLAQETGATAV- 56

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
              Q D +D  +V  +      + G LDIL
Sbjct: 57 ----QTDSADRDAVIDVVR----KSGALDIL 79

Length = 237

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 12/130 (9%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT--ARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           A++TG++ GIG  T    A +G  + L     +E+   E V+ ++A G     L     D
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL---PGD 114

Query: 67  ISDLASVSSLADFIKTQFGKLDILT----KGDAEVDWSKVCYQTYELAVECLKTNYYGTK 122
           + D A    L +    + G LDIL     K  A  D + +  + ++      KTN Y   
Sbjct: 115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFD---ATFKTNVYAMF 171

Query: 123 QTCEALIPLL 132
             C+A IP L
Sbjct: 172 WLCKAAIPHL 181

Length = 300

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 30/155 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR----DEKRGLE-----AVEKLKASGVDP 57
           K   +TG+++GIG     + A  G  +V+ A+      K  L      A E+++A+G   
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK--LPGTIHTAAEEIEAAGGQA 64

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDIL--------TKGDAEVDWSKVCYQTYEL 109
              L    D+ D   V++       +FG +DI           G  +    +     ++L
Sbjct: 65  ---LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKR-----FDL 116

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS 144
             +    N  GT    +A +P L+ S++P ++ LS
Sbjct: 117 MQQ---INVRGTFLVSQACLPHLKKSENPHILTLS 148

Length = 273

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 19/45 (42%), Positives = 32/45 (71%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG 54
          +VT S++GIGF   R+L  KG  VV+++R+E+   +A+++LK  G
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG 48

Length = 259

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 52/232 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQ 64
           K A++TG + GIG       A +G  V +    E+     E  + ++  G    LL+   
Sbjct: 27  KKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK-CLLIPG- 84

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQ 123
            D+ D +    L   +  +FGKLDIL    A       +   T E   +  +TN +    
Sbjct: 85  -DLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFY 143

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A +P L+   S  ++N +S                                      
Sbjct: 144 LTKAALPHLKKGSS--IINTTSVT------------------------------------ 165

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
                A +G  PH   Y  +K  I A+TR L+ +  +    VN V PG + T
Sbjct: 166 -----AYKG-SPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWT 211

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M        V+TG++ GIG  T    A +G  +VL ARDE+      E+ +A G +   +
Sbjct: 2  MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---V 58

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDI 89
          L    D++D   V +LA    +  G++D+
Sbjct: 59 LVVPTDVTDADQVKALATQAASFGGRIDV 87

Length = 330

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+VTG ++G+G     QL   GI V+  AR     L A     A+G     L   +LD+S
Sbjct: 4  AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA-----AAGER---LAEVELDLS 55

Query: 69 DLASV 73
          D A+ 
Sbjct: 56 DAAAA 60

Length = 243

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE 40
          K A+VTG+ KGIG  TV+ LA  G  VV  +R +
Sbjct: 8  KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQ 41

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC---RCD 68

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          I+    +S+LADF  ++ GK+DIL
Sbjct: 69 ITSEQELSALADFALSKLGKVDIL 92

Length = 255

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 50/183 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------------LEAVEKLKAS 53
           K A+V G+ +G G     +L + G TV +T R  +                E V      
Sbjct: 9   KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR 68

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTK----GDAEVDWSKVCY----- 104
           G+        Q+D      V +L + I  + G+LDIL      G+   +W K  +     
Sbjct: 69  GIAV------QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLD 122

Query: 105 ---QTYELAVEC-LKTNYYGTKQTCEALIPLL---------ELSDSPRLVNLSSY-VSAL 150
              +   LA++  L T+++         +PLL         E++D     N + Y +S  
Sbjct: 123 KGLRMLRLAIDTHLITSHF--------ALPLLIRRPGGLVVEITDGTAEYNATHYRLSVF 174

Query: 151 KDL 153
            DL
Sbjct: 175 YDL 177

Length = 305

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 56/247 (22%), Positives = 90/247 (36%), Gaps = 74/247 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PEL 59
           M + + + A+VTG++ GIG E  R L ++G  V L           VEKL+A   +  E 
Sbjct: 1   MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHG-------TRVEKLEALAAELGER 53

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYE 108
           +     ++SD   V +L    +     +DIL      TK       ++ DW  V      
Sbjct: 54  VKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSV------ 107

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L+ N   T +    L   +      R++N++S V                     
Sbjct: 108 -----LEVNLTATFRLTRELTHPMMRRRYGRIINITSVV--------------------- 141

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCV 226
                            G   N    P  + Y  SKA +  +++ LA+        VNCV
Sbjct: 142 -----------------GVTGN----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCV 180

Query: 227 CPGFVKT 233
            PGF+++
Sbjct: 181 APGFIES 187

Length = 245

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          +K  ++TG+++GIG  T    A++G +V +  ARD     E  + ++A+G          
Sbjct: 2  RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR---ACVVA 58

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+++ A V ++ D +++ FG+LD L
Sbjct: 59 GDVANEADVIAMFDAVQSAFGRLDAL 84

Length = 248

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 30/162 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG + GIG     +LA   SK   V  T RD K+     E   A  +    L   
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA--AGALAGGTLETL 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYEL--AVECL------- 114
           QLD+ D  SV++  + +      +D+L           VC     L   +E L       
Sbjct: 59  QLDVCDSKSVAAAVERVTE--RHVDVL-----------VCNAGVGLLGPLEALSEDAMAS 105

Query: 115 --KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 154
               N +GT +  +A +P ++   S R++  SS V  L+ LP
Sbjct: 106 VFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSS-VGGLQGLP 146

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 33/169 (19%)

Query: 8   YAVVTGSNKGIGFETVRQLA----SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             +VTG+++G G    ++LA    S G  +VL+AR+     EA+ +LKA        L  
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARN----DEALRQLKAEIGAERSGLRV 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVC--------YQTYELAVECLK 115
                DL + + L   +K        L +        ++             +  V+   
Sbjct: 58  VRVSLDLGAEAGLEQLLK-------ALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSD 110

Query: 116 T----NYYGTK------QTCEALIPLLELSDSPRLVNLSSYVSALKDLP 154
           +    NY+          T   L    +     R V   S + A++   
Sbjct: 111 STQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK 159

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARD 39
          K  +VTG++ GIG      LA +G  VV  AR+
Sbjct: 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARN 42

Length = 245

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 199 AYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKT 233
           AY  +KA +  YT++LA  Y +F +  N V PG VKT
Sbjct: 147 AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKT 183

Length = 257

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG   GIG  T   LA +G  V++T  D++ G   VE++   G +    LF   D
Sbjct: 17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEA---LFVSYD 73

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +        +       F ++D+L
Sbjct: 74 MEKQGDWQRVISITLNAFSRIDML 97

Length = 169

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.98
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.98
PRK07069	251	short chain dehydrogenase; Validated	99.98
PRK05875	276	short chain dehydrogenase; Provisional	99.98
PRK07326	237	short chain dehydrogenase; Provisional	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK08267	260	short chain dehydrogenase; Provisional	99.98
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.98
PRK06179	270	short chain dehydrogenase; Provisional	99.98
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.93
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.87
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
PRK06720	169	hypothetical protein; Provisional	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02583	297	cinnamoyl-CoA reductase	99.83
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.81
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
PLN02650	351	dihydroflavonol-4-reductase	99.79
PLN00198	338	anthocyanidin reductase; Provisional	99.78
PLN02240	352	UDP-glucose 4-epimerase	99.78
PLN02214	342	cinnamoyl-CoA reductase	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.77
PLN02572	442	UDP-sulfoquinovose synthase	99.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.76
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.75
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.74
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.73
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.73
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.71
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.71
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.7
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.7
PLN02686	367	cinnamoyl-CoA reductase	99.69
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.69
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.68
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.68
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.65
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.63
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.63
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.62
PLN02427	386	UDP-apiose/xylose synthase	99.61
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.61
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.59
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.58
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.55
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.55
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.55
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.55
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.53
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.53
PLN02260	668	probable rhamnose biosynthetic enzyme	99.53
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.53
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.52
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.47
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.47
PLN02206	442	UDP-glucuronate decarboxylase	99.45
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.43
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.4
CHL00194	317	ycf39 Ycf39; Provisional	99.38
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.36
PLN02996	491	fatty acyl-CoA reductase	99.34
PRK07201	657	short chain dehydrogenase; Provisional	99.33
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.31
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.31
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.28
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.28
PLN02503	605	fatty acyl-CoA reductase 2	99.26
PRK05865	854	hypothetical protein; Provisional	99.24
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.24
PLN02778	298	3,5-epimerase/4-reductase	99.24
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.16
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.14
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.11
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.11
PLN02260	668	probable rhamnose biosynthetic enzyme	99.1
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.08
PRK08309	177	short chain dehydrogenase; Provisional	99.05
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.99
PLN00016	378	RNA-binding protein; Provisional	98.93
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.85
PRK12320	699	hypothetical protein; Provisional	98.79
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.74
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.73
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.69
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.67
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.67
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.67
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.64
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.62
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.61
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.54
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.41
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.38
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.3
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.28
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.28
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.27
COG2910	211	Putative NADH-flavin reductase [General function p	98.22
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.14
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.14
PLN00106	323	malate dehydrogenase	98.13
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.11
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.03
PRK09620	229	hypothetical protein; Provisional	98.01
PRK14982	340	acyl-ACP reductase; Provisional	97.95
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.94
PTZ00325	321	malate dehydrogenase; Provisional	97.92
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.79
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.76
KOG2774	366	consensus NAD dependent epimerase [General functio	97.6
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.55
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.53
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.5
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.46
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.45
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.43
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.35
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.32
PRK05086	312	malate dehydrogenase; Provisional	97.26
PRK06849	389	hypothetical protein; Provisional	97.22
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.19
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.17
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.17
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.15
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.15
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.1
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.08
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.08
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.07
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.06
COG3268	382	Uncharacterized conserved protein [Function unknow	97.03
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.01
PRK14968	188	putative methyltransferase; Provisional	97.01
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.0
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.99
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.96
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.92
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.92
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.91
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.9
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.89
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.87
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.87
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.83
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.81
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.73
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.72
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.61
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.6
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.59
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.58
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.57
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.57
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.54
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.5
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.5
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.48
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.46
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.4
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.39
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.35
PRK08328	231	hypothetical protein; Provisional	96.35
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.33
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.31
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.3
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.27
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.26
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.23
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.22
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.21
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.2
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.2
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.17
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.17
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.13
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.11
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.1
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.07
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.06
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.05
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.99
PRK08223	287	hypothetical protein; Validated	95.99
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.98
PRK09496	453	trkA potassium transporter peripheral membrane com	95.96
PLN00203	519	glutamyl-tRNA reductase	95.9
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.9
PTZ00117	319	malate dehydrogenase; Provisional	95.88
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.86
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.86
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.85
PRK04148	134	hypothetical protein; Provisional	95.84
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.83
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.82
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.8
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.79
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.75
PRK05442	326	malate dehydrogenase; Provisional	95.73
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.71
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.69
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.68
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.66
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.65
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.62
PRK08655	437	prephenate dehydrogenase; Provisional	95.62
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.61
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.6
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.54
PLN02602	350	lactate dehydrogenase	95.53
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.5
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.49
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.49
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.49
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.48
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.46
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.4
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.38
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.3
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.26
PLN02740	381	Alcohol dehydrogenase-like	95.22
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.22
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.13
PLN02928	347	oxidoreductase family protein	95.12
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.06
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.03
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.02
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.01
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.98
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.93
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.92
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	94.92
PTZ00354	334	alcohol dehydrogenase; Provisional	94.89
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.89
PRK06223	307	malate dehydrogenase; Reviewed	94.88
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.86
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.86
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.83
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	94.82
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.8
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.7
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.7
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.7
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.69
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.67
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.67
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.66
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.62
PRK09496	453	trkA potassium transporter peripheral membrane com	94.6
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.57
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.56
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.52
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.49
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.48
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.48
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.47
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	94.44
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	94.44
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.44
PLN02827	378	Alcohol dehydrogenase-like	94.43
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.39
PRK07411	390	hypothetical protein; Validated	94.36
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.31
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.25
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	94.25
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.24
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.23
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.23
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.18
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.14
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.11
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.08
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.05
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	94.01
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	93.99
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	93.97
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.95
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	93.94
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.94
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.89
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	93.84
PRK14851	679	hypothetical protein; Provisional	93.84
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	93.83
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	93.82
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	93.79
PLN02306	386	hydroxypyruvate reductase	93.71
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	93.66
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.63
PLN02494	477	adenosylhomocysteinase	93.62
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.61

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.5e-42  Score=284.45  Aligned_cols=214  Identities=27%  Similarity=0.326  Sum_probs=195.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |..+++|+++|||||+|||.++|+.|+++|++|++++|..+++++++.++..     ..+.+..+|++|.++++++++.+
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHHHHHHHHHHH
Confidence            7888999999999999999999999999999999999999999999988865     12889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++|++||+||||||.....++...+.++|+.++++|+.|.++.+++++|.|.+++.|.|||+||++|..+.        
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y--------  147 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY--------  147 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC--------
Confidence            999999999999999988888999999999999999999999999999999999999999999999988665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+++.+|+..++.|+  ++|||.+|+||.|.|.....
T Consensus       148 ----------------------------------~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~  193 (246)
T COG4221         148 ----------------------------------PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFST  193 (246)
T ss_pred             ----------------------------------CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccc
Confidence                                              889999999999999999999999  89999999999997654321


Q ss_pred             C----------------CCCChhhhhccceeecccCCCC
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGG  261 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~  261 (275)
                      .                ..++|++.|+.+++....|...
T Consensus       194 v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         194 VRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             ccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcc
Confidence            1                2578999999999888888754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.3e-41  Score=288.02  Aligned_cols=193  Identities=26%  Similarity=0.365  Sum_probs=176.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++.||+|+|||||+|||.++|.+|+++|++++++.|..++++...+++.+..... +++++++|++|+++++++++++
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999999988888765554 6999999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ..+||++|+||||||..........+.+++.+.|++|++|+..++++++|+|++++.|+||++||++|..+.        
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~--------  157 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL--------  157 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC--------
Confidence            999999999999999988555667788899999999999999999999999998888999999999998765        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC----CeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP----KFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~----~i~vn~v~pG~v~T~~~  236 (275)
                                                        |....|++||+|+.+|+.+++.|+.    .|++ +|+||+|+|++.
T Consensus       158 ----------------------------------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~  202 (282)
T KOG1205|consen  158 ----------------------------------PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFT  202 (282)
T ss_pred             ----------------------------------CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeeccc
Confidence                                              6677999999999999999999982    2667 999999999975


Q ss_pred             C
Q 023896          237 F  237 (275)
Q Consensus       237 ~  237 (275)
                      .
T Consensus       203 ~  203 (282)
T KOG1205|consen  203 G  203 (282)
T ss_pred             c
Confidence            3

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.9e-40  Score=280.24  Aligned_cols=215  Identities=23%  Similarity=0.304  Sum_probs=195.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |..+.++++||||||+|||.++|++|+++|++|++++|+.++++++.+++....+.  .+.++++|+++.+++.++.+++
T Consensus         1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v--~v~vi~~DLs~~~~~~~l~~~l   78 (265)
T COG0300           1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV--EVEVIPADLSDPEALERLEDEL   78 (265)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCc--eEEEEECcCCChhHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999876533  2889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++.||+||||||.....++.+.+.++.++++++|+++...|.++++|.|.+++.|.||||+|.+|..+.        
T Consensus        79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~--------  150 (265)
T COG0300          79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT--------  150 (265)
T ss_pred             HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC--------
Confidence            999899999999999999999999999999999999999999999999999999999999999999999876        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        |..+.|++||+++.+|+.+|+.|+  .||+|.+|+||+|.|++...
T Consensus       151 ----------------------------------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~  196 (265)
T COG0300         151 ----------------------------------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA  196 (265)
T ss_pred             ----------------------------------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc
Confidence                                              788999999999999999999999  57999999999999999841


Q ss_pred             C-----------CCCChhhhhccceeecccCC
Q 023896          239 A-----------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ~-----------~~~~~~~~a~~~~~~~~~~~  259 (275)
                      .           ..++|++.++..+..+...+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         197 KGSDVYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             cccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence            1           14678888877776665533

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=4e-40  Score=260.95  Aligned_cols=226  Identities=20%  Similarity=0.224  Sum_probs=199.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++.|+++||||++|||++++..|+++|++|++.+++...+++.+..+...+ +   ...+.||+++.++++..+++..+.
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~---h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-D---HSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-c---cceeeeccCcHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999998888887775532 2   668999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh--cCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE--LSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +|++++||||||+....-..-...++|++.+.+|+.|.|.+.|++...|.  +++..+|||+||+.|..+.         
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN---------  158 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN---------  158 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc---------
Confidence            99999999999998776666778899999999999999999999998854  3334599999999999887         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       -+...|+++|+++.+|+|+.|+|+  ++||||.|+||+|.|||+...
T Consensus       159 ---------------------------------~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m  205 (256)
T KOG1200|consen  159 ---------------------------------FGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM  205 (256)
T ss_pred             ---------------------------------ccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc
Confidence                                             568899999999999999999998  799999999999999998765


Q ss_pred             CCCChhhh-hccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILSVEEG-AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ++--.++. ...|+++...++++++...||+++.++|
T Consensus       206 p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssY  242 (256)
T KOG1200|consen  206 PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSY  242 (256)
T ss_pred             CHHHHHHHHccCCccccCCHHHHHHHHHHHhcccccc
Confidence            44333333 3568999999999999999999999887

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=280.81  Aligned_cols=228  Identities=24%  Similarity=0.251  Sum_probs=188.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+..+++...+++....+  .++.++++|++++++++++++++. 
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN--VDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCCCHHHHHHHHHHHH-
Confidence            36899999999999999999999999999999999999888887777754322  237889999999999999999885 


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.          
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~----------  151 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI----------  151 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC----------
Confidence            6899999999999866666677899999999999999999999999999988878999999998876543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      +....|+++|+++++|+|.++.|+  .|||||+|+||+|+|++.... 
T Consensus       152 --------------------------------~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~  199 (263)
T PRK08339        152 --------------------------------PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLA  199 (263)
T ss_pred             --------------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHH
Confidence                                            667889999999999999999999  589999999999999975321 


Q ss_pred             ------CCCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          240 ------GILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ------~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                            ...++++.     ...++++...|++.+....|+.++.++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~  246 (263)
T PRK08339        200 QDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSY  246 (263)
T ss_pred             HhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcC
Confidence                  00111111     1235566666777777777777766543

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=273.85  Aligned_cols=231  Identities=20%  Similarity=0.204  Sum_probs=185.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||.+++++|+++|++|++++|+.++.+...+++...+.   ++..+++|+++++++.++++++
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG---KVVPVCCDVSQHQQVTSMLDQV   80 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999888888777765442   2778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++ +++||++||..+....       
T Consensus        81 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  153 (253)
T PRK05867         81 TAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-------  153 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-------
Confidence            99999999999999987766677788999999999999999999999999997654 4799999997765321       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       .+.....|+++|+++++++++++.++  .+|+||+|+||+|+|++..
T Consensus       154 ---------------------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~  200 (253)
T PRK05867        154 ---------------------------------VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE  200 (253)
T ss_pred             ---------------------------------CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc
Confidence                                             00234689999999999999999998  5899999999999999864


Q ss_pred             CCCCCChhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          238 HAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       238 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      .............++++..+|++++....|+.++.++
T Consensus       201 ~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~  237 (253)
T PRK05867        201 PYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASS  237 (253)
T ss_pred             cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence            3211101111223445555555666666666655444

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3.8e-38  Score=272.11  Aligned_cols=232  Identities=31%  Similarity=0.387  Sum_probs=197.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++.+|+++|||+++|||+++|++|++.|++|++++|+.++++...+++........++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999998888776555556899999999999999999999


Q ss_pred             Hhh-cCCccEEEcCCcccccc-hhhccchhHHHHhHHhhccc-HHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           81 KTQ-FGKLDILTKGDAEVDWS-KVCYQTYELAVECLKTNYYG-TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        81 ~~~-~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      .++ ||+||++|||||..... ++.+.+.+.|+.++++|+.| .+.+.+.+.+++.++++|.|+++||..+..+.     
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~-----  157 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG-----  157 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC-----
Confidence            999 79999999999987765 57799999999999999995 67777777888888788999999998877553     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC-chhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                           .+. ..|+++|+|+++++|.+|.|+  .+||||+|+||+|.|+
T Consensus       158 -------------------------------------~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~  200 (270)
T KOG0725|consen  158 -------------------------------------PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTS  200 (270)
T ss_pred             -------------------------------------CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCC
Confidence                                                 222 789999999999999999999  6899999999999999


Q ss_pred             CcCCCCCC-----Chhh----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGIL-----SVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~-----~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      + ......     ...+    ....+++++..|++++....|++++.++|
T Consensus       201 ~-~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asy  249 (270)
T KOG0725|consen  201 L-RAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASY  249 (270)
T ss_pred             c-cccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCccccc
Confidence            8 221111     1111    12347889999999999999999888765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=273.40  Aligned_cols=228  Identities=20%  Similarity=0.227  Sum_probs=182.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..  +...+.+...+.   ++.++++|++++++++++++++
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGR---KFHFITADLIQQKDIDSIVSQA   77 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCC---eEEEEEeCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998653  233344443332   3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|.|.+++ +|+||++||..+..+.       
T Consensus        78 ~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  150 (251)
T PRK12481         78 VEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------  150 (251)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-------
Confidence            99999999999999987666677788999999999999999999999999997654 5899999998876553       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         +....|++||++++.+++.++.|+  .+||||+|+||+|+|++..
T Consensus       151 -----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~  195 (251)
T PRK12481        151 -----------------------------------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTA  195 (251)
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchh
Confidence                                               456789999999999999999998  5899999999999999864


Q ss_pred             CCCCCCh---hhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILSV---EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .......   ....+.++.+..+|++.+....|+.++.+.|
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~  236 (251)
T PRK12481        196 ALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDY  236 (251)
T ss_pred             hcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            3211000   0112334555566666676777776665543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-38  Score=274.58  Aligned_cols=225  Identities=21%  Similarity=0.231  Sum_probs=176.9

Q ss_pred             ccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+....+. .+++....+.   ...+++|+++.++++++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~---~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS---DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC---ceEEeCCCCCHHHHHHHHHHH
Confidence            36789999999997  99999999999999999999998643333 3333322221   346899999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .++||++|+||||||....    .++.+.+.++|++.+++|++++++++++++|+|++  +|+||++||..+..+.    
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~----  153 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVM----  153 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccC----
Confidence            9999999999999997543    34567889999999999999999999999999973  4899999998776443    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            +.+..|++||+|+.+|+|+++.|+  .+||||+|+||+|+|+
T Consensus       154 --------------------------------------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~  195 (271)
T PRK06505        154 --------------------------------------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL  195 (271)
T ss_pred             --------------------------------------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence                                                  667889999999999999999998  5899999999999999


Q ss_pred             CcCCCCCC-Chh-h-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGIL-SVE-E-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~-~~~-~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +....... ... . ....++++..+|++.+....|++++.++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        196 AGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             ccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccc
Confidence            75321100 000 0 11235555666667777777776665543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-38  Score=275.44  Aligned_cols=225  Identities=20%  Similarity=0.215  Sum_probs=176.5

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.+++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++......  . .++++|+++.+++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~--~-~~~~~Dv~d~~~v~~~~~~   76 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS--D-YVYELDVSKPEHFKSLAES   76 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC--c-eEEEecCCCHHHHHHHHHH
Confidence            45689999999997  89999999999999999999999863 22233333322221  1 5689999999999999999


Q ss_pred             HHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           80 IKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      +.+++|++|++|||||....    .++.+.+.++|++.|++|+.+++++++.++|.|.+  .|+||++||..+..+.   
T Consensus        77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~---  151 (274)
T PRK08415         77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYV---  151 (274)
T ss_pred             HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCC---
Confidence            99999999999999997542    45567889999999999999999999999999964  4799999998776443   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             +....|++||+|+.+|+++++.|+  ++||||+|+||+|+|
T Consensus       152 ---------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T  192 (274)
T PRK08415        152 ---------------------------------------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKT  192 (274)
T ss_pred             ---------------------------------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence                                                   567789999999999999999998  589999999999999


Q ss_pred             CCcCCCCCCC---hhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          234 DINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       234 ~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ++........   .......++.+..+|++.+....|+.++.++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~  236 (274)
T PRK08415        193 LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSS  236 (274)
T ss_pred             HHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhh
Confidence            8753211100   0001234556666666777777776665544

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.5e-38  Score=273.02  Aligned_cols=228  Identities=24%  Similarity=0.259  Sum_probs=183.1

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      |+++++|+++||||+  +|||++++++|+++|++|++++|+.+  +.++.++++.....   +..++++|++++++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN---PSLFLPCDVQDDAQIEET   77 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC---cceEeecCcCCHHHHHHH
Confidence            778899999999986  89999999999999999999877543  33445555554432   266889999999999999


Q ss_pred             HHHHHhhcCCccEEEcCCcccc----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           77 ADFIKTQFGKLDILTKGDAEVD----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      ++++.+++|++|++|||||...    ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.
T Consensus        78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~  155 (258)
T PRK07370         78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAI  155 (258)
T ss_pred             HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCC
Confidence            9999999999999999999753    245667789999999999999999999999999974  4899999998776543


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                +....|++||+|+.+++++++.|+  ++|+||+|+||+
T Consensus       156 ------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~  193 (258)
T PRK07370        156 ------------------------------------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGP  193 (258)
T ss_pred             ------------------------------------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCc
Confidence                                                      667899999999999999999998  589999999999


Q ss_pred             eecCCcCCCCC---CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          231 VKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       231 v~T~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      |+|++......   .........++.++.+|++.++...|+.++.++|
T Consensus       194 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~  241 (258)
T PRK07370        194 IRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG  241 (258)
T ss_pred             ccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhcc
Confidence            99997532210   0000112345666667777777777777766554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.8e-38  Score=265.13  Aligned_cols=211  Identities=22%  Similarity=0.254  Sum_probs=195.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+|++||||||++|||+++|.+|+++|+++++.+.|.+..++..++++..+    +++.+.||+++.+++.+..+++++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----ceeEEEecCCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999999888663    399999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++|.+|+||||||+....++.+.+.++++.++++|+.|+|+..|+|+|.|.+++.|+||+++|++|..+.          
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~----------  180 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP----------  180 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC----------
Confidence            9999999999999999988889999999999999999999999999999999999999999999999876          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCCeeecCCcC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                      ++...|++||.|+.++.+++..|+     .+|+...|+|++++|.|..
T Consensus       181 --------------------------------~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~  228 (300)
T KOG1201|consen  181 --------------------------------AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD  228 (300)
T ss_pred             --------------------------------ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC
Confidence                                            788999999999999999999987     4799999999999999875


Q ss_pred             C-------CCCCChhhhhccceeecccCC
Q 023896          238 H-------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       238 ~-------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      .       .+.+.|++.++.++..+.+.+
T Consensus       229 ~~~~~~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  229 GATPFPTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             CCCCCccccCCCCHHHHHHHHHHHHHcCC
Confidence            2       356899999999888776555

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-38  Score=271.54  Aligned_cols=228  Identities=16%  Similarity=0.126  Sum_probs=181.4

Q ss_pred             CcccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |..+++|++|||||  ++|||++++++|+++|++|++++|+. +.++.++++....+.   ...+++|++++++++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS---ELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC---ceEEECCCCCHHHHHHHHH
Confidence            77889999999997  67999999999999999999998864 334444555433222   4578999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccc----h-hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           79 FIKTQFGKLDILTKGDAEVDWS----K-VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      ++.++++++|++|||||+....    + +.+.+.++|+..+++|+++++++++++.|.|+++ +|+||++||..+..+. 
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~-  154 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAI-  154 (261)
T ss_pred             HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCC-
Confidence            9999999999999999986431    2 3356778999999999999999999999999754 4899999998776543 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               +++..|+++|+|+..+++.++.++  .+||||+|+||+|
T Consensus       155 -----------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v  193 (261)
T PRK08690        155 -----------------------------------------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPI  193 (261)
T ss_pred             -----------------------------------------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence                                                     677889999999999999999998  5899999999999


Q ss_pred             ecCCcCCCCCCCh--hh-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          232 KTDINFHAGILSV--EE-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       232 ~T~~~~~~~~~~~--~~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +|++.........  +. ....+++++.+|++.++...|+.++.++|
T Consensus       194 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~  240 (261)
T PRK08690        194 KTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG  240 (261)
T ss_pred             cchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            9997543211000  01 12346666777777777777777766554

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-38  Score=272.03  Aligned_cols=221  Identities=20%  Similarity=0.204  Sum_probs=179.7

Q ss_pred             ccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+. +.++..+++..     ..+.++++|++++++++++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-----EEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-----CceeEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999  8999999999999999999999984 34443344322     13778999999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+++|++|++|||||....    .++.+.+.++|+..+++|+.+++.++++++|.|++  .|+||++||..+..+.    
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~----  151 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAI----  151 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccC----
Confidence            9999999999999997543    45567788999999999999999999999999964  4899999998776543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            +.+..|++||+|+++|+++++.|+  ++||||+|+||+|+|+
T Consensus       152 --------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~  193 (252)
T PRK06079        152 --------------------------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL  193 (252)
T ss_pred             --------------------------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence                                                  567889999999999999999998  5899999999999999


Q ss_pred             CcCCCCCCChhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +.....  ..++     ..+.++.+..+|++.+....|+.++.++|
T Consensus       194 ~~~~~~--~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  237 (252)
T PRK06079        194 AVTGIK--GHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTG  237 (252)
T ss_pred             ccccCC--ChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccccc
Confidence            753321  1111     12345566677777777777777766543

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-38  Score=271.33  Aligned_cols=232  Identities=26%  Similarity=0.320  Sum_probs=190.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++..... ..++.++++|+++++++.++++++
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999888888777765211 123788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....+..+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.        
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  152 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII--------  152 (260)
T ss_pred             HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC--------
Confidence            999999999999999866555556788999999999999999999999999987777899999998766543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++++++.++.++  .+||||+|+||+|+|++...
T Consensus       153 ----------------------------------~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        153 ----------------------------------PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTED  198 (260)
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhh
Confidence                                              566789999999999999999998  58999999999999998542


Q ss_pred             CC-C-CChhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AG-I-LSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~-~-~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .. . ..++.     ....++.+..+|++.+....|+.++.++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~  242 (260)
T PRK07063        199 WWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPF  242 (260)
T ss_pred             hhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccc
Confidence            10 0 11111     11235566666777777777777766544

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=265.59  Aligned_cols=192  Identities=27%  Similarity=0.321  Sum_probs=171.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||.+++++|+++|++|++++|+.++++...+++...+..   +.++.+|++++++++++++++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~   77 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE---AVALAGDVRDEAYAKALVALA   77 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999998888887777654432   788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc-CCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL-KDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~~  158 (275)
                      .++++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.. +.      
T Consensus        78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------  151 (254)
T PRK07478         78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF------  151 (254)
T ss_pred             HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC------
Confidence            999999999999999753 3556678899999999999999999999999999888788999999977642 22      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.++++++.++  .+|+||+|+||+++|++.
T Consensus       152 ------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  195 (254)
T PRK07478        152 ------------------------------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMG  195 (254)
T ss_pred             ------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccc
Confidence                                                567889999999999999999998  589999999999999975


Q ss_pred             C
Q 023896          237 F  237 (275)
Q Consensus       237 ~  237 (275)
                      .
T Consensus       196 ~  196 (254)
T PRK07478        196 R  196 (254)
T ss_pred             c
Confidence            4

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.8e-38  Score=271.50  Aligned_cols=190  Identities=26%  Similarity=0.364  Sum_probs=168.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+ .++++..+++...+.   ++.++++|+++++++.++++++
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG---KAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCC---eEEEEEeecCCHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999 777777777765433   2788999999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|+||||||.... .++.+.+.+.|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.       
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------  148 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD-------  148 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-------
Confidence            9999999999999998643 4555678899999999999999999999999998665 899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.++++++.++  .+|+||+|+||+|+|++..
T Consensus       149 -----------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  193 (272)
T PRK08589        149 -----------------------------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVD  193 (272)
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhh
Confidence                                               566789999999999999999998  5899999999999999754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.5e-38  Score=269.92  Aligned_cols=226  Identities=17%  Similarity=0.153  Sum_probs=177.1

Q ss_pred             CcccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |.++++|++|||||++  |||++++++|+++|++|++++|+. +.+...+++......   ...+++|++++++++++++
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---DIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCC---ceEeecCCCCHHHHHHHHH
Confidence            6778999999999986  999999999999999999999983 444445555443322   5678999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccch-----hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSK-----VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      ++.+.||++|++|||||+....+     +.+.+.++|++.+++|+.+++.+.+.+.|.++  ++|+||++||..+..+. 
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~-  153 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAI-  153 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCC-
Confidence            99999999999999999754322     44568899999999999999999999998764  34899999998765443 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               +....|++||+|+++++++++.|+  ++||||+|+||+|
T Consensus       154 -----------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v  192 (262)
T PRK07984        154 -----------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI  192 (262)
T ss_pred             -----------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcc
Confidence                                                     567789999999999999999998  5899999999999


Q ss_pred             ecCCcCCCCCCC---hhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          232 KTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       232 ~T~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      +|++........   .......++.+...|++.+....|+.++.++
T Consensus       193 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~  238 (262)
T PRK07984        193 RTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  238 (262)
T ss_pred             cchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccc
Confidence            998743211100   0001123555566666666666666666544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-37  Score=268.89  Aligned_cols=225  Identities=22%  Similarity=0.226  Sum_probs=177.8

Q ss_pred             ccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|++|||||++  |||++++++|+++|++|++++|+. +.++..+++....+.   ..++++|++++++++++++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~---~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC---NFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC---ceEEEccCCCHHHHHHHHHHH
Confidence            36789999999997  999999999999999999999884 334444555433221   346789999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .++||++|+||||+|....    .++.+.+.++|++.+++|+.+++.+++++.|.|++  +|+||++||..+..+.    
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~----  154 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVI----  154 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCC----
Confidence            9999999999999987532    34557789999999999999999999999999963  4899999998766443    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            +....|++||+|+++|+++++.|+  ++||||+|+||+|+|+
T Consensus       155 --------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  196 (260)
T PRK06603        155 --------------------------------------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL  196 (260)
T ss_pred             --------------------------------------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence                                                  567889999999999999999998  5899999999999999


Q ss_pred             CcCCCCCCCh--h-hhhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGILSV--E-EGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~~~--~-~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +.........  + .....++.+...|++.+....|+.++.++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  240 (260)
T PRK06603        197 ASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKG  240 (260)
T ss_pred             hhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccc
Confidence            7532211100  0 111235566666777777777777766554

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=266.17  Aligned_cols=232  Identities=20%  Similarity=0.232  Sum_probs=190.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+++...+.   ++..+++|+++++++.+++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR---RAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999999764 44566666655432   277889999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+..      
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  153 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNR------  153 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC------
Confidence            99999999999999998766667778899999999999999999999999999887778999999988765430      


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ......|+++|++++.+++.++.++  .+||||+|+||+++|++..
T Consensus       154 ----------------------------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        154 ----------------------------------GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT  199 (254)
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence                                              0225789999999999999999998  6899999999999999864


Q ss_pred             CCCCCC--hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILS--VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ......  .......++++..+|++.+....|++++.++|
T Consensus       200 ~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~  239 (254)
T PRK06114        200 RPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASF  239 (254)
T ss_pred             cccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            211110  01123356677777777888888888776654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=267.90  Aligned_cols=225  Identities=18%  Similarity=0.178  Sum_probs=174.7

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~   75 (275)
                      |.++++|+++||||+  +|||++++++|+++|++|++++|+.+   ++++..+++.  +   .++.++++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~---~~~~~~~~Dv~d~~~v~~   76 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--G---QESLLLPCDVTSDEEITA   76 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--C---CceEEEecCCCCHHHHHH
Confidence            556789999999997  89999999999999999999987643   2333333221  1   237788999999999999


Q ss_pred             HHHHHHhhcCCccEEEcCCcccc----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC
Q 023896           76 LADFIKTQFGKLDILTKGDAEVD----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK  151 (275)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  151 (275)
                      +++++.++||++|++|||||...    ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+|||+||..+..+
T Consensus        77 ~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~  154 (257)
T PRK08594         77 CFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERV  154 (257)
T ss_pred             HHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccC
Confidence            99999999999999999999753    234557788999999999999999999999999964  489999999887654


Q ss_pred             CCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCC
Q 023896          152 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPG  229 (275)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG  229 (275)
                      .                                          +....|++||+|+++|+++++.|+  .+||||+|+||
T Consensus       155 ~------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  192 (257)
T PRK08594        155 V------------------------------------------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAG  192 (257)
T ss_pred             C------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecC
Confidence            3                                          567789999999999999999998  58999999999


Q ss_pred             eeecCCcCCCCCCCh---hhhhccceeecccCCCCCcceEeccCcccC
Q 023896          230 FVKTDINFHAGILSV---EEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       230 ~v~T~~~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      +|+|++.........   ......++.+..+|++.+....|+.++.++
T Consensus       193 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~  240 (257)
T PRK08594        193 PIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSR  240 (257)
T ss_pred             cccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccc
Confidence            999987432110000   001122444455555556666666555443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=267.57  Aligned_cols=225  Identities=19%  Similarity=0.193  Sum_probs=174.2

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+.+..+ .++++......   ..++++|+++.+++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDA---PIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhcc---ceEEecCcCCHHHHHHHHHH
Confidence            56789999999998  59999999999999999999999864322 22333222111   45789999999999999999


Q ss_pred             HHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           80 IKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      +.++||++|++|||||....    .++.+.+.++|++.|++|+.+++.+++.++|.|++  .|+||++||..+..+.   
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~---  156 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVV---  156 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCC---
Confidence            99999999999999997542    34556788999999999999999999999999963  4899999997765432   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             +....|+++|+|+.+++++++.|+  .+||||+|+||+|+|
T Consensus       157 ---------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T  197 (258)
T PRK07533        157 ---------------------------------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKT  197 (258)
T ss_pred             ---------------------------------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCC
Confidence                                                   567789999999999999999998  689999999999999


Q ss_pred             CCcCCCCCCCh--h-hhhccceeecccCCCCCcceEeccCcccC
Q 023896          234 DINFHAGILSV--E-EGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       234 ~~~~~~~~~~~--~-~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ++.........  + .....++.+..+|++.+....|++++.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~  241 (258)
T PRK07533        198 RAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAAR  241 (258)
T ss_pred             hhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhc
Confidence            98643211110  0 01123444455555566666666655443

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=266.30  Aligned_cols=224  Identities=21%  Similarity=0.236  Sum_probs=187.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh---------hHHHHHHHHHHhcCCCCCceeEEEecccChH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---------KRGLEAVEKLKASGVDPELLLFHQLDISDLA   71 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~   71 (275)
                      |..+++|++|||||++|||++++++|+++|++|++++|+.         ..++...+++...+..   +.++++|+++++
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~~   77 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE---AVANGDDIADWD   77 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc---eEEEeCCCCCHH
Confidence            7778999999999999999999999999999999998876         5666666666654332   778899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC------CCeEEEEec
Q 023896           72 SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD------SPRLVNLSS  145 (275)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~vsS  145 (275)
                      ++.++++++.+.+|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.++.      .|+||++||
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS  157 (286)
T PRK07791         78 GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS  157 (286)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence            99999999999999999999999987666677788999999999999999999999999997532      379999999


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV  223 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v  223 (275)
                      .++..+.                                          ++...|+++|+|+++++++++.|+  .+|||
T Consensus       158 ~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrV  195 (286)
T PRK07791        158 GAGLQGS------------------------------------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTV  195 (286)
T ss_pred             hhhCcCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence            8877654                                          667899999999999999999998  68999


Q ss_pred             EeecCCeeecCCcCCC-------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          224 NCVCPGFVKTDINFHA-------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       224 n~v~pG~v~T~~~~~~-------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      |+|+|| +.|++....             ...+|++.++.+++++.......+|.++..+
T Consensus       196 n~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vd  254 (286)
T PRK07791        196 NAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVE  254 (286)
T ss_pred             EEECCC-CCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEc
Confidence            999999 888874211             1357778787777766554445566655544

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-37  Score=265.19  Aligned_cols=227  Identities=17%  Similarity=0.149  Sum_probs=175.2

Q ss_pred             CcccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |..+++|++|||||  ++|||++++++|+++|++|++++|.... ++.++++......   ...+++|++++++++++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~   76 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGS---DLVFPCDVASDEQIDALFA   76 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCC---cceeeccCCCHHHHHHHHH
Confidence            67889999999996  6899999999999999999998765322 2222333322222   3468899999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccc----h-hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           79 FIKTQFGKLDILTKGDAEVDWS----K-VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      ++.++||++|++|||||.....    + +.+.+.++|++.|++|+.+++.++++++|+|.  +.|+||++||+.+..+. 
T Consensus        77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~-  153 (260)
T PRK06997         77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVV-  153 (260)
T ss_pred             HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCC-
Confidence            9999999999999999975432    2 33567899999999999999999999999995  34899999998776443 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               +....|++||+|+++++++++.|+  ++||||+|+||+|
T Consensus       154 -----------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v  192 (260)
T PRK06997        154 -----------------------------------------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPI  192 (260)
T ss_pred             -----------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence                                                     567789999999999999999998  5899999999999


Q ss_pred             ecCCcCCCCCCCh--hh-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          232 KTDINFHAGILSV--EE-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       232 ~T~~~~~~~~~~~--~~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +|++.........  ++ ....++.+...|++.+....|+.++.++|
T Consensus       193 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  239 (260)
T PRK06997        193 KTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG  239 (260)
T ss_pred             ccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence            9987532211000  00 11235566666777777777777765543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-37  Score=266.11  Aligned_cols=193  Identities=18%  Similarity=0.163  Sum_probs=166.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++| +.++++...+++....+  .++.++++|+++++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--IKAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHH
Confidence            46778999999999999999999999999999998875 55666666666654322  2388999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccc------cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           80 IKTQFGKLDILTKGDAEVD------WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      +.+.++++|++|||||...      ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+. 
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  159 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI-  159 (260)
T ss_pred             HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC-
Confidence            9999999999999998642      234556778999999999999999999999999988777899999998766443 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               +....|++||++++.+++.++.++  ++||||+|+||++
T Consensus       160 -----------------------------------------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i  198 (260)
T PRK08416        160 -----------------------------------------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPI  198 (260)
T ss_pred             -----------------------------------------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcc
Confidence                                                     567789999999999999999998  5899999999999


Q ss_pred             ecCCcC
Q 023896          232 KTDINF  237 (275)
Q Consensus       232 ~T~~~~  237 (275)
                      +|++..
T Consensus       199 ~T~~~~  204 (260)
T PRK08416        199 DTDALK  204 (260)
T ss_pred             cChhhh
Confidence            999853

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-37  Score=265.45  Aligned_cols=229  Identities=26%  Similarity=0.325  Sum_probs=187.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...... .++..+++|+++.+++.++++++.+
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG-ARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999998888877777654322 2377899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||.....++.+.+.++|++.+++|+++++.+++.++|.|++++.|+||++||..+..+.          
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  153 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE----------  153 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC----------
Confidence            9999999999999876666777888999999999999999999999999988777999999998876554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      +....|+++|+++.+++++++.|+  .+|+||+|+||+|+|++.... 
T Consensus       154 --------------------------------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~  201 (265)
T PRK07062        154 --------------------------------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRY  201 (265)
T ss_pred             --------------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHH
Confidence                                            567889999999999999999998  689999999999999975321 


Q ss_pred             -----CCCChhh-------hhccceeecccCCCCCcceEeccCcccC
Q 023896          240 -----GILSVEE-------GAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       240 -----~~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                           .....++       ....++.+..+|++.+....|+.++.+.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~  248 (265)
T PRK07062        202 EARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSS  248 (265)
T ss_pred             HHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhc
Confidence                 0001111       1123455555666666666666665443

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-37  Score=270.98  Aligned_cols=194  Identities=22%  Similarity=0.243  Sum_probs=163.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh----------hHHHHHHHHHHhcCCCCCceeEEEecccCh
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----------KRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~   70 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.          ++++...+++...+.   ++.++++|++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~Dv~~~   79 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGG---RGIAVQVDHLVP   79 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCC---ceEEEEcCCCCH
Confidence            5678899999999999999999999999999999999984          344555556654432   277889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCC-cccc----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGD-AEVD----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ++++++++++.+.||+||++|||| |...    ..++.+.+.++|++.+++|+.+++.++++++|.|.++++|+||++||
T Consensus        80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS  159 (305)
T PRK08303         80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD  159 (305)
T ss_pred             HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence            999999999999999999999999 7531    14455678899999999999999999999999998776789999999


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV  223 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v  223 (275)
                      ..+....                                       .+.++...|++||+|+.+|+++++.|+  .+|||
T Consensus       160 ~~~~~~~---------------------------------------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrV  200 (305)
T PRK08303        160 GTAEYNA---------------------------------------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATA  200 (305)
T ss_pred             ccccccC---------------------------------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            6653211                                       011345689999999999999999999  58999


Q ss_pred             EeecCCeeecCCc
Q 023896          224 NCVCPGFVKTDIN  236 (275)
Q Consensus       224 n~v~pG~v~T~~~  236 (275)
                      |+|+||+|+|++.
T Consensus       201 n~v~PG~v~T~~~  213 (305)
T PRK08303        201 VALTPGWLRSEMM  213 (305)
T ss_pred             EEecCCccccHHH
Confidence            9999999999974

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.7e-37  Score=269.64  Aligned_cols=227  Identities=20%  Similarity=0.209  Sum_probs=176.7

Q ss_pred             cccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc----------CCCCCceeEEEecc--
Q 023896            2 AEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS----------GVDPELLLFHQLDI--   67 (275)
Q Consensus         2 ~~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~~~~Dl--   67 (275)
                      ++++||++|||||  ++|||+++|+.|+++|++|++ +|+..++++...++...          +........+++|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3488999999999  899999999999999999999 88888888777666421          10011246788898  


Q ss_pred             cC------------------hHHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHH
Q 023896           68 SD------------------LASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEA  127 (275)
Q Consensus        68 ~~------------------~~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  127 (275)
                      ++                  +++++++++++.++||+||+||||||...  ..++.+.+.++|+++|++|+++++.++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  34899999999999999999999997533  25677889999999999999999999999


Q ss_pred             HhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC-chhhHhHHH
Q 023896          128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAV  206 (275)
Q Consensus       128 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a  206 (275)
                      ++|.|++  .|+|||+||+.+..+.                                          ++. ..|++||+|
T Consensus       164 ~~p~m~~--~G~II~isS~a~~~~~------------------------------------------p~~~~~Y~asKaA  199 (303)
T PLN02730        164 FGPIMNP--GGASISLTYIASERII------------------------------------------PGYGGGMSSAKAA  199 (303)
T ss_pred             HHHHHhc--CCEEEEEechhhcCCC------------------------------------------CCCchhhHHHHHH
Confidence            9999975  3899999998876543                                          434 479999999


Q ss_pred             HHHHHHHHHHhC-C--CeEEEeecCCeeecCCcCCCCCCChhh----hhccceeecccCCCCCcceEeccCcccC
Q 023896          207 INAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHAGILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       207 ~~~~~~~~a~~~-~--~i~vn~v~pG~v~T~~~~~~~~~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      +++|+++|+.|+ +  +||||+|+||+|+|+|...... .++.    ....++.+...|++.+....|+.++.++
T Consensus       200 l~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~  273 (303)
T PLN02730        200 LESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-IDDMIEYSYANAPLQKELTADEVGNAAAFLASPLAS  273 (303)
T ss_pred             HHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999998 3  7999999999999998643210 1110    1122445555566666666666665554

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=268.82  Aligned_cols=214  Identities=25%  Similarity=0.327  Sum_probs=189.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++.+|+++.++++++++++
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~~~~~~~   78 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---VLVVPTDVTDADQVKALATQA   78 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999988888887765433   778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.+++++.+++|+.+++++++.++|+|++++.|+||++||+.+..+.        
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~--------  150 (330)
T PRK06139         79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ--------  150 (330)
T ss_pred             HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC--------
Confidence            999999999999999877777778899999999999999999999999999998878999999998776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||+++.+|+++++.|+   ++|+|++|+||+|+|++..
T Consensus       151 ----------------------------------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~  196 (330)
T PRK06139        151 ----------------------------------PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR  196 (330)
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccc
Confidence                                              667899999999999999999997   3799999999999999753


Q ss_pred             C------------CCCCChhhhhccceeecccCC
Q 023896          238 H------------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       238 ~------------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      .            ....+|++.++.++..+..+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        197 HGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             cccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            2            124688888888887766554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.9e-37  Score=265.96  Aligned_cols=223  Identities=17%  Similarity=0.219  Sum_probs=173.8

Q ss_pred             cCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+  +|||++++++|+++|++|++++|+.. ..+.++++....+.   ...+++|++++++++++++++.
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA---FVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC---ceEEecCCCCHHHHHHHHHHHH
Confidence            568999999997  89999999999999999999998743 22233333322222   4568999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           82 TQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      +++|++|++|||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|++  +|+||++||+.+..+.     
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~-----  156 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVM-----  156 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCC-----
Confidence            999999999999997542    34557788999999999999999999999999963  4899999997665433     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           +.+..|++||+|+.+++++++.|+  .+||||+|+||+|+|++
T Consensus       157 -------------------------------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  199 (272)
T PRK08159        157 -------------------------------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA  199 (272)
T ss_pred             -------------------------------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence                                                 667889999999999999999998  58999999999999987


Q ss_pred             cCCCCCCCh-hh--hhccceeecccCCCCCcceEeccCcccC
Q 023896          236 NFHAGILSV-EE--GAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       236 ~~~~~~~~~-~~--~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ......... .+  ....++.+..+|++.+...+|+.++.++
T Consensus       200 ~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~  241 (272)
T PRK08159        200 ASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSR  241 (272)
T ss_pred             HhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCcccc
Confidence            532211100 00  1124555556666666666666665554

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.7e-37  Score=264.97  Aligned_cols=181  Identities=24%  Similarity=0.324  Sum_probs=164.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.....              .+..+++|++++++++++++++
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~--------------~~~~~~~D~~~~~~i~~~~~~~   66 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN--------------DVDYFKVDVSNKEQVIKGIDYV   66 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC--------------ceEEEEccCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999864311              2778999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.        
T Consensus        67 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  138 (258)
T PRK06398         67 ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT--------  138 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC--------
Confidence            999999999999999877677777899999999999999999999999999987777999999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++++++.++.|+ ++|+||+|+||+++|++..
T Consensus       139 ----------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~  182 (258)
T PRK06398        139 ----------------------------------RNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLE  182 (258)
T ss_pred             ----------------------------------CCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHh
Confidence                                              667899999999999999999998 5699999999999999753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=261.52  Aligned_cols=226  Identities=23%  Similarity=0.260  Sum_probs=184.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+++|++|||||++|||++++++|+++|++|++++|+.++++...+++.      .++.++++|+++.++++++++++
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG------DHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCCCHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999887766655441      12778899999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhH----HHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYEL----AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      .+.++++|++|||||+... .++.+.+.++    |++++++|+.+++.+++.++|.|+++ .|+||++||..+..+.   
T Consensus        75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~---  150 (263)
T PRK06200         75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPG---  150 (263)
T ss_pred             HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCC---
Confidence            9999999999999997532 3333444443    89999999999999999999998755 4899999998776543   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecC
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~  234 (275)
                                                             ++...|++||++++.+++.++.++ ++||||+|+||+|+|+
T Consensus       151 ---------------------------------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~  191 (263)
T PRK06200        151 ---------------------------------------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD  191 (263)
T ss_pred             ---------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence                                                   556789999999999999999998 7799999999999999


Q ss_pred             CcCCCCC--------CCh----hhhhccceeecccCCCCCcceEeccCcc-cCC
Q 023896          235 INFHAGI--------LSV----EEGAESPVKLALLPDGGPTGRFFLRKEE-APF  275 (275)
Q Consensus       235 ~~~~~~~--------~~~----~~~a~~~~~~~~~~~~~~~~~~~~~~~~-a~~  275 (275)
                      +......        ..+    ......++++..+|++.+....|+.++. ++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~  245 (263)
T PRK06200        192 LRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRA  245 (263)
T ss_pred             CcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCc
Confidence            8532110        001    1112346777888888888888888876 654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=261.81  Aligned_cols=187  Identities=25%  Similarity=0.288  Sum_probs=165.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++++|+++++++.++++++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG------ERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CeeEEEEecCCCHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999877766655541      12788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||....... +.+.++|++.+++|+.+++.++++++|.|. ++.|+||++||..+..+.        
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~--------  144 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQ--------  144 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCC--------
Confidence            9999999999999997544333 467899999999999999999999999997 556899999998877554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++..
T Consensus       145 ----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~  189 (261)
T PRK08265        145 ----------------------------------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMD  189 (261)
T ss_pred             ----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhh
Confidence                                              567789999999999999999998  5899999999999999753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=260.77  Aligned_cols=229  Identities=19%  Similarity=0.245  Sum_probs=187.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..++....+++...+.   ++..+++|++++++++++++++.
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGI---KAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC---eEEEEecCCCCHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999888777777765432   27788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.         
T Consensus        82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  152 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---------  152 (254)
T ss_pred             HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC---------
Confidence            99999999999999876666777889999999999999999999999999987777899999998766543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++....
T Consensus       153 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~  199 (254)
T PRK08085        153 ---------------------------------DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL  199 (254)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh
Confidence                                             566789999999999999999998  589999999999999986432


Q ss_pred             CC---CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..   +........++.+..+|++.+....|+.++.++|
T Consensus       200 ~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~  238 (254)
T PRK08085        200 VEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF  238 (254)
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            11   0000112234555555666666666666655543

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=258.42  Aligned_cols=191  Identities=25%  Similarity=0.301  Sum_probs=172.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.   ++.++++|+++.+++.++++++
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF---DVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEeCCCCCHHHHHHHHHHH
Confidence            8889999999999999999999999999999999999999888887777764432   2778999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++ +|+||++||..+..+.       
T Consensus        78 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-------  150 (275)
T PRK05876         78 FRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-------  150 (275)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-------
Confidence            99999999999999987766777889999999999999999999999999997665 5899999998876554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|+++|+++.++++.++.++  .+|+|++|+||+++|++.
T Consensus       151 -----------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  194 (275)
T PRK05876        151 -----------------------------------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV  194 (275)
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence                                               677899999999999999999998  589999999999999975

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=259.45  Aligned_cols=227  Identities=22%  Similarity=0.252  Sum_probs=181.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++|++|||||++|||.+++++|+++|++|++++|+ ++.+...+.+...+.   .+.++++|+++++++.++++++.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGR---KVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999998 555555555544332   27889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.+|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.         
T Consensus        87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  157 (258)
T PRK06935         87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG---------  157 (258)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC---------
Confidence            99999999999999876666667788999999999999999999999999988878999999998776543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       +....|+++|++++.++++++.++  .+|+||+|+||+++|++....
T Consensus       158 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~  204 (258)
T PRK06935        158 ---------------------------------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPI  204 (258)
T ss_pred             ---------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhc
Confidence                                             556789999999999999999998  589999999999999975422


Q ss_pred             CCC-Ch--hhhhccceeecccCCCCCcceEeccCcccC
Q 023896          240 GIL-SV--EEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       240 ~~~-~~--~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ... ..  ......+..+...|++.+....|++++.++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  242 (258)
T PRK06935        205 RADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASD  242 (258)
T ss_pred             ccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhc
Confidence            100 00  001122334444455555555555555443

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=251.72  Aligned_cols=225  Identities=21%  Similarity=0.251  Sum_probs=187.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||.+++++|+++|++|++++|+..+.+...+++...+..   +..+++|+++.++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~   79 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK---AEALACHIGEMEQIDALFAHI   79 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999998888887777654332   778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||... ..+..+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.       
T Consensus        80 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  152 (252)
T PRK07035         80 RERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG-------  152 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC-------
Confidence            999999999999998643 344556788999999999999999999999999988777899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||+++++++++++.++  .+|+||+|+||+|+|++..
T Consensus       153 -----------------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~  197 (252)
T PRK07035        153 -----------------------------------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFAS  197 (252)
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccc
Confidence                                               667889999999999999999998  5899999999999998754


Q ss_pred             CC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                 ...+|++.++..+.++.......+|..+..+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d  247 (252)
T PRK07035        198 ALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVD  247 (252)
T ss_pred             cccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence            21                 1235666666666655544444555555444

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-35  Score=255.36  Aligned_cols=186  Identities=24%  Similarity=0.272  Sum_probs=155.9

Q ss_pred             CcccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         1 m~~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      |+++++|+++||||  ++|||.+++++|+++|++|++++|+.  +..++..+++.    .  ++.++++|++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----~--~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP----E--PAPVLELDVTNEEHLASL   75 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC----C--CCcEEeCCCCCHHHHHHH
Confidence            45588999999999  89999999999999999999999874  22333333331    1  267889999999999999


Q ss_pred             HHHHHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      ++++.+.++++|++|||||+...    .++.+.+.++|++.+++|+.+++.+++.++|.|++  +|+||++|+.. ..+.
T Consensus        76 ~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~  152 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAW  152 (256)
T ss_pred             HHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccC
Confidence            99999999999999999997643    23556788999999999999999999999999973  47999998742 2111


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                +.+..|++||+|+.+|+++++.|+  ++||||+|+||+
T Consensus       153 ------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~  190 (256)
T PRK07889        153 ------------------------------------------PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGP  190 (256)
T ss_pred             ------------------------------------------CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCc
Confidence                                                      556789999999999999999998  689999999999


Q ss_pred             eecCCcC
Q 023896          231 VKTDINF  237 (275)
Q Consensus       231 v~T~~~~  237 (275)
                      |+|++..
T Consensus       191 v~T~~~~  197 (256)
T PRK07889        191 IRTLAAK  197 (256)
T ss_pred             ccChhhh
Confidence            9999754

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=254.84  Aligned_cols=226  Identities=27%  Similarity=0.277  Sum_probs=185.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|+++||||++|||++++++|+++|++|++++|+.++.+...+++...+.   ++..+++|+++.+++.++++++
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~   78 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG---EALFVACDVTRDAEVKALVEQT   78 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999888777777765433   3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|++|||+|.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.       
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-------  151 (253)
T PRK06172         79 IAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-------  151 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-------
Confidence            9999999999999997543 33567788999999999999999999999999987777899999998776554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       152 -----------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~  196 (253)
T PRK06172        152 -----------------------------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFR  196 (253)
T ss_pred             -----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence                                               667889999999999999999998  5899999999999999865


Q ss_pred             CCC------------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          238 HAG------------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       238 ~~~------------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ...                  ..+|++.++..+.++.......+|.++..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        197 RAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             hhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            321                  1245555555555444444445555544443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=255.63  Aligned_cols=228  Identities=23%  Similarity=0.291  Sum_probs=185.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+.+...+.+...+.   ++..+++|++++++++++++++
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~---~~~~~~~D~~~~~~~~~~~~~~   81 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL---SAHALAFDVTDHDAVRAAIDAF   81 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCc---eEEEEEccCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999887777666655432   3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.+.|.+++.++||++||..+..+.        
T Consensus        82 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  153 (255)
T PRK07523         82 EAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR--------  153 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC--------
Confidence            999999999999999877777778889999999999999999999999999987777899999997765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++...
T Consensus       154 ----------------------------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  199 (255)
T PRK07523        154 ----------------------------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAA  199 (255)
T ss_pred             ----------------------------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhh
Confidence                                              567899999999999999999998  58999999999999998542


Q ss_pred             CCC---CChhhhhccceeecccCCCCCcceEeccCccc
Q 023896          239 AGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  273 (275)
Q Consensus       239 ~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a  273 (275)
                      ...   ....-..+.++.+...+++.+...+|+.++.+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  237 (255)
T PRK07523        200 LVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDAS  237 (255)
T ss_pred             hccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            210   00001112344445555555666666655544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1e-35  Score=255.85  Aligned_cols=188  Identities=22%  Similarity=0.289  Sum_probs=162.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++++..  ++..+.+...+.   .+..+++|++++++++++++++.+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGR---RFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999998887643  333444443322   278899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++ +|+||++||..+..+.         
T Consensus        82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  152 (253)
T PRK08993         82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---------  152 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---------
Confidence            999999999999987666666788899999999999999999999999997654 5899999998776543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       +....|+++|++++++++.++.++  .+|+||+|+||+++|++..
T Consensus       153 ---------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~  197 (253)
T PRK08993        153 ---------------------------------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ  197 (253)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchh
Confidence                                             556789999999999999999998  5899999999999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=257.34  Aligned_cols=227  Identities=24%  Similarity=0.248  Sum_probs=185.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.   ++.++++|+++++++.++++++.+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG---EALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998887777777765433   388899999999999999999999


Q ss_pred             hcCCccEEEcCCccccc---------------chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           83 QFGKLDILTKGDAEVDW---------------SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      .++++|++|||||....               .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~  163 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN  163 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence            99999999999986432               234466789999999999999999999999999887779999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+.                                          ++...|+++|++++.++++++.++  ++||||+
T Consensus       164 ~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~  201 (278)
T PRK08277        164 AFTPL------------------------------------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNA  201 (278)
T ss_pred             hcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            76554                                          567889999999999999999998  5899999


Q ss_pred             ecCCeeecCCcCCCCC----CChhh----hhccceeecccCCCCCcceEeccCc-ccC
Q 023896          226 VCPGFVKTDINFHAGI----LSVEE----GAESPVKLALLPDGGPTGRFFLRKE-EAP  274 (275)
Q Consensus       226 v~pG~v~T~~~~~~~~----~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~-~a~  274 (275)
                      |+||+|+|++......    ...+.    ....++++..+|++.+....|+.++ .+.
T Consensus       202 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~  259 (278)
T PRK08277        202 IAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASS  259 (278)
T ss_pred             EEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccC
Confidence            9999999997532210    00000    1234556666677777777777776 544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.5e-35  Score=253.65  Aligned_cols=221  Identities=18%  Similarity=0.198  Sum_probs=178.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+++++..+.   .+   ..+..+++|+++.+++.++++++.
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~---~~~~~~~~D~~~~~~~~~~~~~~~   74 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HG---DAVVGVEGDVRSLDDHKEAVARCV   74 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cC---CceEEEEeccCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998766554332   11   127788999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc-chhhccc----hhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           82 TQFGKLDILTKGDAEVDW-SKVCYQT----YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++++++|++|||||.... .++.+.+    .+.|++.+++|+.+++.++++++|.|.+.+ |+||++||..+..+.    
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~----  149 (262)
T TIGR03325        75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN----  149 (262)
T ss_pred             HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC----
Confidence            999999999999996432 2222222    257999999999999999999999997654 799999998776543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~  235 (275)
                                                            ++...|+++|++++++++.++.++ ++||||+|+||+|+|++
T Consensus       150 --------------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       150 --------------------------------------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             --------------------------------------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence                                                  456789999999999999999998 66999999999999998


Q ss_pred             cCCCC---------CCChhhh--hccceeecccCCCCCcceEeccCc
Q 023896          236 NFHAG---------ILSVEEG--AESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       236 ~~~~~---------~~~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .....         .....+.  ...++++..+|++.+....|+.++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       192 RGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             ccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecC
Confidence            64211         0011121  234677888888888998888876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.9e-35  Score=250.14  Aligned_cols=226  Identities=23%  Similarity=0.205  Sum_probs=185.5

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecC-----------hhHHHHHHHHHHhcCCCCCceeEEEecc
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARD-----------EKRGLEAVEKLKASGVDPELLLFHQLDI   67 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl   67 (275)
                      |..+++|++|||||+  +|||++++++|+++|++|++++|+           .....+..++++..+.   ++.++++|+
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~D~   77 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV---KVSSMELDL   77 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC---eEEEEEcCC
Confidence            778899999999999  499999999999999999998643           2223334444544332   388899999


Q ss_pred             cChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      ++.+++.++++++.+.+|++|++|||||.....++.+.+.++|++.+++|+.+++.+.++++|.|.+++.|+||++||..
T Consensus        78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  157 (256)
T PRK12859         78 TQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQ  157 (256)
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence            99999999999999999999999999998766677788999999999999999999999999999877779999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+.                                          ++...|+++|++++.++++++.++  ++|+||+
T Consensus       158 ~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~  195 (256)
T PRK12859        158 FQGPM------------------------------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNA  195 (256)
T ss_pred             cCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            76543                                          667899999999999999999998  5899999


Q ss_pred             ecCCeeecCCcCC------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          226 VCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       226 v~pG~v~T~~~~~------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |+||+++|++...            ....+|++.++..+.++.......+|.++..+.
T Consensus       196 v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  253 (256)
T PRK12859        196 INPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEG  253 (256)
T ss_pred             EEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence            9999999986321            013467777777777665544556666665543

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-34  Score=248.43  Aligned_cols=208  Identities=18%  Similarity=0.164  Sum_probs=178.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||++|||++++++|+ +|++|++++|+.+++++..+++...+..  .+.++++|++|.++++++++++.+.+|+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT--SVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC--ceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 5999999999999988888888765432  2778899999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|++|||||.....+..+.+.+.+.+.+++|+.+++.+++.++|.|.+++ +|+||++||.++..+.             
T Consensus        78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-------------  144 (246)
T PRK05599         78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-------------  144 (246)
T ss_pred             CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-------------
Confidence            99999999986544444556677889999999999999999999997654 5899999998887654             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                                   ++...|+++|+|++++++.++.|+  .+|+||+|+||+|+|++....    
T Consensus       145 -----------------------------~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~~  195 (246)
T PRK05599        145 -----------------------------RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPAP  195 (246)
T ss_pred             -----------------------------cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCCC
Confidence                                         567889999999999999999998  689999999999999985432    


Q ss_pred             CCCChhhhhccceeecccCC
Q 023896          240 GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ...+|++.++.++..+....
T Consensus       196 ~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        196 MSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             CCCCHHHHHHHHHHHHhcCC
Confidence            12589999999888777543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=252.76  Aligned_cols=222  Identities=23%  Similarity=0.187  Sum_probs=184.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||++|||++++++|+++|++|++++|+..++++..+++...+    .+.++++|+++.++++++++++.+.++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG----EVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            69999999999999999999999999999999988888877776432    27789999999999999999999999999


Q ss_pred             cEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh-cCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           88 DILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        88 d~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      |+||||||...  ...+.+.+.++|.+.+++|+.+++.+.+.++|.|. +++.|+||++||..+..+.            
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~------------  145 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM------------  145 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC------------
Confidence            99999999753  23355677889999999999999999999999886 4456899999998776443            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC--
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG--  240 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~--  240 (275)
                                                    ++...|+++|+++.+++|+++.++  ++|+||+|+||+++|++.....  
T Consensus       146 ------------------------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~  195 (259)
T PRK08340        146 ------------------------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLAR  195 (259)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHh
Confidence                                          567789999999999999999998  5899999999999999863210  


Q ss_pred             -----CCChhh------hhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 -----ILSVEE------GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 -----~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                           ..++++      ..+.++++...|++.+....|++++.++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~  241 (259)
T PRK08340        196 IAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEY  241 (259)
T ss_pred             hhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccccc
Confidence                 011111      12346777777888888888888887765

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=256.29  Aligned_cols=236  Identities=25%  Similarity=0.298  Sum_probs=187.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...... ..+.++++|+++.++++++++++
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~-~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD-AKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-CceEEEEecCCCHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999888888877654322 23888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.+++||+||||||.... +..+.+.++++..|++|+++++.+++.++|.|++. .++||++||..+..+..+.+    
T Consensus        88 ~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~----  161 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWD----  161 (313)
T ss_pred             HHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcc----
Confidence            9999999999999997643 23356789999999999999999999999999765 58999999988765431100    


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~  236 (275)
                        +                        ......+++...|+.||.++..+++.++.++    .+|+||+|+||+|.|++.
T Consensus       162 --~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        162 --D------------------------LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             --c------------------------ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence              0                        0111122456789999999999999999864    479999999999999985


Q ss_pred             CCC-----------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 FHA-----------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~~~-----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...                       ...++++++...+.....|... .|.||..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~-~g~~~~~~  271 (313)
T PRK05854        216 AARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDAE-GGAFYGPR  271 (313)
T ss_pred             ccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCCC-CCcEECCC
Confidence            311                       0236677777777777666543 47777653

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.8e-35  Score=258.67  Aligned_cols=225  Identities=24%  Similarity=0.292  Sum_probs=180.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|++|||||++|||++++++|+++|++|++.+|+.  ...++..+.+...+.   ++.++++|+++.+++.++++++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR---KAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999988754  334444444433332   2778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|.+  .++||++||+.+..+.       
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~-------  193 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPS-------  193 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCC-------
Confidence            999999999999998643 345667789999999999999999999999999864  4799999998876543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+++|++++++++.++.++  .+|+||+|+||+|+|++..
T Consensus       194 -----------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~  238 (294)
T PRK07985        194 -----------------------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI  238 (294)
T ss_pred             -----------------------------------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccc
Confidence                                               566789999999999999999998  5899999999999999853


Q ss_pred             CCCCCCh----hhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILSV----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~----~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ... ...    ......++++..+|++.+...+|++++.++|
T Consensus       239 ~~~-~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~  279 (294)
T PRK07985        239 SGG-QTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_pred             ccC-CCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCC
Confidence            211 111    1122345566667777888888887776554

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=251.51  Aligned_cols=187  Identities=26%  Similarity=0.343  Sum_probs=160.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++|++|||||++|||++++++|+++|++|++.+ |+.++.+....++...+..   ...+++|+++.+++..+++++.+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---AFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEecccCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 5666666666666554332   67889999999999999888765


Q ss_pred             ----hcC--CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           83 ----QFG--KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        83 ----~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                          .++  ++|+||||||.....++.+.+.+.|++++++|+.+++.++++++|.|++  .|+||++||..+..+.    
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~----  152 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISL----  152 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCC----
Confidence                334  8999999999865555667788999999999999999999999999964  3799999998876543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||+++++++++++.++  .+||||+|+||+|+|+
T Consensus       153 --------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~  194 (252)
T PRK12747        153 --------------------------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD  194 (252)
T ss_pred             --------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence                                                  566789999999999999999998  6899999999999999


Q ss_pred             CcC
Q 023896          235 INF  237 (275)
Q Consensus       235 ~~~  237 (275)
                      +..
T Consensus       195 ~~~  197 (252)
T PRK12747        195 MNA  197 (252)
T ss_pred             hhh
Confidence            864

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-34  Score=254.24  Aligned_cols=239  Identities=34%  Similarity=0.430  Sum_probs=196.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++.+++++||||++|||.++|++|+.+|++|++++||.++.++.+++++.. .....+.++++|+++..+|.++++++.+
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~-~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKG-KANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            567899999999999999999999999999999999999999999999873 3344589999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||++....  ..+.|.++.+|.+|++|+|.|++.++|.|+.+..+||||+||..+ ....      .++
T Consensus       111 ~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~------~~~  181 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKI------DLK  181 (314)
T ss_pred             cCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCcc------chh
Confidence            9999999999999987654  568889999999999999999999999999877799999999887 1110      011


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC-CeEEEeecCCeeecC-CcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-KFCVNCVCPGFVKTD-INFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~i~vn~v~pG~v~T~-~~~~~-  239 (275)
                      ++   +.+.                   ...+.....|+.||.++..+++.|+++++ ||.+++++||.|.|+ +.+.. 
T Consensus       182 ~l---~~~~-------------------~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~  239 (314)
T KOG1208|consen  182 DL---SGEK-------------------AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNL  239 (314)
T ss_pred             hc---cchh-------------------ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchH
Confidence            11   1000                   01123344799999999999999999995 999999999999999 44411 


Q ss_pred             -----------C-CCChhhhhccceeecccCC-CCCcceEeccCccc
Q 023896          240 -----------G-ILSVEEGAESPVKLALLPD-GGPTGRFFLRKEEA  273 (275)
Q Consensus       240 -----------~-~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~a  273 (275)
                                 . ..++++++++.+..+..|+ +...|.+|..+.+.
T Consensus       240 ~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~  286 (314)
T KOG1208|consen  240 LLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIA  286 (314)
T ss_pred             HHHHHHHHHHHHhccCHHHHhhheehhccCccccCcccccccccccc
Confidence                       1 1378999999999998887 56777776655443

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=244.73  Aligned_cols=186  Identities=18%  Similarity=0.138  Sum_probs=164.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|+++||||++|||++++++|+++|++|++++|+..++++..+++...+..   +..+++|++++++++++++++.
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   77 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN---VYSFQLKDFSQESIRHLFDAIE   77 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC---eEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999988888877655432   7788999999999999999999


Q ss_pred             hhcC-CccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHH
Q 023896           82 TQFG-KLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        82 ~~~g-~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      ++++ +||++|||+|... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+.         
T Consensus        78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---------  148 (227)
T PRK08862         78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---------  148 (227)
T ss_pred             HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---------
Confidence            9999 9999999998543 34566778899999999999999999999999998654 6899999996543         


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                          ++...|+++|+++.+|+++++.|+  .+||||+|+||+++|+.
T Consensus       149 ------------------------------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 ------------------------------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                                                345689999999999999999998  58999999999999984

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=250.75  Aligned_cols=226  Identities=22%  Similarity=0.278  Sum_probs=189.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-------HHHHHHHHHhcCCCCCceeEEEecccChHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v   73 (275)
                      ||.+++|++|||||++|||.+++++|+++|++|++++|+...       ++...+++...+.   ++.++++|+++.+++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~D~~~~~~i   77 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG---QALPLVGDVRDEDQV   77 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCC---ceEEEEecCCCHHHH
Confidence            788899999999999999999999999999999999998653       3344445544332   388899999999999


Q ss_pred             HHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           74 SSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      .++++++.+.++++|++|||||.....+..+.+.++|++.+++|+.+++.+++++.|.|+++++++|+++||..+..+  
T Consensus        78 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--  155 (273)
T PRK08278         78 AAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP--  155 (273)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc--
Confidence            999999999999999999999987666677788999999999999999999999999998877789999999665432  


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCC-e
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPG-F  230 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG-~  230 (275)
                                                            .+.++...|++||++++.++++++.++  ++|+||+|+|| +
T Consensus       156 --------------------------------------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~  197 (273)
T PRK08278        156 --------------------------------------KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTT  197 (273)
T ss_pred             --------------------------------------cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCc
Confidence                                                  122556799999999999999999998  58999999999 6


Q ss_pred             eecCCcCCC--------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          231 VKTDINFHA--------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       231 v~T~~~~~~--------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ++|++....        ...+|++.++.++.++.......+|.++..
T Consensus       198 i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~  244 (273)
T PRK08278        198 IATAAVRNLLGGDEAMRRSRTPEIMADAAYEILSRPAREFTGNFLID  244 (273)
T ss_pred             cccHHHHhcccccccccccCCHHHHHHHHHHHhcCccccceeEEEec
Confidence            888753321        246888999998888877666778877753

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-35  Score=255.79  Aligned_cols=190  Identities=24%  Similarity=0.306  Sum_probs=169.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.++++...+++..    ...+..+++|+++.++++++++++
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~----~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG----DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC----CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999999888877776642    123667789999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+. .|+||++||..+..+.        
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~--------  150 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAA--------  150 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCC--------
Confidence            9999999999999998777777788999999999999999999999999999764 4899999998876554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||++++.+++.++.++  .+|+||+|+||+++|++..
T Consensus       151 ----------------------------------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  195 (296)
T PRK05872        151 ----------------------------------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVR  195 (296)
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhh
Confidence                                              667899999999999999999998  6899999999999999864

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=5.4e-35  Score=257.50  Aligned_cols=225  Identities=28%  Similarity=0.330  Sum_probs=178.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ..+++|++|||||++|||++++++|+++|++|++++++..  ..+...+.+...+.   ++.++++|+++.+++++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGR---KAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCC---eEEEEecCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999887643  34445555554432   277899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.+.++++|+||||||... ..++.+.+.++|++.+++|++++++++++++|.|++  +++||++||+.+..+.      
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~------  199 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPS------  199 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCC------
Confidence            9999999999999999753 345667789999999999999999999999999864  4799999998876543      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       200 ------------------------------------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~  243 (300)
T PRK06128        200 ------------------------------------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ  243 (300)
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence                                                566789999999999999999998  689999999999999985


Q ss_pred             CCCCCCChhh----hhccceeecccCCCCCcceEeccCcccC
Q 023896          237 FHAGILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       237 ~~~~~~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      .... ...+.    ....++.+...|++.+...+|+.++.++
T Consensus       244 ~~~~-~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~  284 (300)
T PRK06128        244 PSGG-QPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESS  284 (300)
T ss_pred             ccCC-CCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            3211 11111    1233455555556666666666655443

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=8.5e-35  Score=250.37  Aligned_cols=194  Identities=23%  Similarity=0.272  Sum_probs=172.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++..... ...+..+.+|+++++++.++++++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999888877777765421 123888899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|.....+..+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.        
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------  154 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV--------  154 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC--------
Confidence            999999999999999865556667889999999999999999999999999987777899999998876554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.++  ++++||+|+||+++|++..
T Consensus       155 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        155 ----------------------------------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccc
Confidence                                              566789999999999999999998  6899999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=256.01  Aligned_cols=212  Identities=24%  Similarity=0.251  Sum_probs=186.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++|.++++++++++.
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~---~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE---ALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---EEEEEecCCCHHHHHHHHHHHH
Confidence            4677899999999999999999999999999999999999888888887765433   8889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|++|||||.....++.+.+.+++++.+++|+++++.+++.++|.|++++.|+||++||..+..+.         
T Consensus        81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~---------  151 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI---------  151 (334)
T ss_pred             HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC---------
Confidence            99999999999999877777778899999999999999999999999999988777999999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       +....|+++|++++.++++++.|+    .+|+|++|+||+++|++..
T Consensus       152 ---------------------------------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        152 ---------------------------------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence                                             567889999999999999999997    3699999999999998643


Q ss_pred             C------------CCCCChhhhhccceeecccC
Q 023896          238 H------------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 ~------------~~~~~~~~~a~~~~~~~~~~  258 (275)
                      .            ....+|++.++.++..+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        199 WARSRLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             hhhhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            1            12458888888888877655

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-34  Score=246.42  Aligned_cols=189  Identities=21%  Similarity=0.314  Sum_probs=170.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.+...+.+...+.   ++.++++|++++++++++++++.+
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGI---EAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888777777765432   388899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||.....++.+.+.+.|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.          
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  153 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR----------  153 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC----------
Confidence            9999999999999877666677889999999999999999999999999988778999999998776554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                      ++...|+++|++++.++++++.++  .+|+||+|+||++.|++.
T Consensus       154 --------------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (265)
T PRK07097        154 --------------------------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT  197 (265)
T ss_pred             --------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence                                            567889999999999999999998  689999999999999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=249.66  Aligned_cols=226  Identities=23%  Similarity=0.178  Sum_probs=182.0

Q ss_pred             cCCCEEEEecCCC-chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNK-GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~-gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++|++|||||+| |||+++++.|+++|++|++++|+..+.+...+++...... .++..+++|++++++++++++++.+
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-GRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999985 9999999999999999999999998887777776552221 2378899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .+|++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|.... .|+||++||..+..+.         
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------  164 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---------  164 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---------
Confidence            999999999999986666677788899999999999999999999999998765 6899999998776543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|+++++++++++.++  .+||||+|+||+++|++....
T Consensus       165 ---------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~  211 (262)
T PRK07831        165 ---------------------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV  211 (262)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc
Confidence                                             567789999999999999999998  589999999999999986432


Q ss_pred             CCCChhh----hhccceeecccCCCCCcceEeccCcccC
Q 023896          240 GILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       240 ~~~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      .  .++.    ....++.+...|++.+....|+.++.++
T Consensus       212 ~--~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~  248 (262)
T PRK07831        212 T--SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSS  248 (262)
T ss_pred             c--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            1  1110    0122344444555555555555555443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.5e-34  Score=243.43  Aligned_cols=221  Identities=22%  Similarity=0.257  Sum_probs=177.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||.+++++|+++|++|++++|+..  ....+.+.....   .+.++++|+++.+++.++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGR---RFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999763  233344443332   278899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.         
T Consensus        77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  147 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---------  147 (248)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------
Confidence            999999999999987666666778899999999999999999999999997665 6899999998766443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       +....|+++|++++.++++++.++  .+|+||+|+||+|+|++....
T Consensus       148 ---------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~  194 (248)
T TIGR01832       148 ---------------------------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQAL  194 (248)
T ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcc
Confidence                                             456789999999999999999998  589999999999999975321


Q ss_pred             -----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                       ...+|++.++..+.++.......+|.++..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  242 (248)
T TIGR01832       195 RADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVD  242 (248)
T ss_pred             ccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence                             1234555555555544433333445544443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=9.2e-34  Score=243.71  Aligned_cols=187  Identities=24%  Similarity=0.335  Sum_probs=166.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||+++++.|+++|++|++++|+....+....++...+.   .+.++++|+++++++.++++++.++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG---KAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            78999999999999999999999999999999999888777777765432   277899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.            
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  146 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN------------  146 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC------------
Confidence            999999999987666666778899999999999999999999999997654 4799999998776553            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                    ++...|+++|++++.+++.++.++  .||+||+|+||+++|++..
T Consensus       147 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  191 (256)
T PRK08643        147 ------------------------------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF  191 (256)
T ss_pred             ------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh
Confidence                                          556789999999999999999998  5899999999999999753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=242.88  Aligned_cols=189  Identities=23%  Similarity=0.292  Sum_probs=166.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.   ++.++.+|+++.+++.++++.+.+
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998888777777665433   277889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||+|.....+. +.+.++|++.+++|+.+++++++++.|.|.+.+.++||++||+.+..+.          
T Consensus        85 ~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  153 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------  153 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------
Confidence            99999999999997654443 5688999999999999999999999999987777899999998876554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                      ++...|+++|++++++++.++.++  .+||||+|+||+++|++..
T Consensus       154 --------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~  198 (255)
T PRK06113        154 --------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK  198 (255)
T ss_pred             --------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc
Confidence                                            556789999999999999999998  5899999999999999754

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=246.89  Aligned_cols=209  Identities=23%  Similarity=0.319  Sum_probs=184.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++++++|||||+||||++++++|+++|++|++++|+.++++...+++.       .+.++++|+++++++.++++++.
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~   73 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVTDPASFAAFLDAVE   73 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988776655543       26788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||||......+.+.+.+.+++++++|+.+++.+++.++|.|++++.|+||++||..+..+.         
T Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  144 (273)
T PRK07825         74 ADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV---------  144 (273)
T ss_pred             HHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC---------
Confidence            99999999999999877777777888999999999999999999999999998888999999998877654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  .+++++.|+||+++|++....
T Consensus       145 ---------------------------------~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        145 ---------------------------------PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence                                             677899999999999999999998  689999999999999986432


Q ss_pred             ------CCCChhhhhccceeecccCC
Q 023896          240 ------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ------~~~~~~~~a~~~~~~~~~~~  259 (275)
                            ...++++.++.++..+..+.
T Consensus       192 ~~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        192 GGAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             ccccCCCCCCHHHHHHHHHHHHhCCC
Confidence                  35788998888877666544

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.4e-33  Score=245.93  Aligned_cols=189  Identities=24%  Similarity=0.286  Sum_probs=164.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++..    ..++.++++|+++.++++++++++.
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG----EPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC----CCceEEEEeecCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998776666555521    1238899999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++++++++.+.|.+++.|+||++||..+..+.       
T Consensus        90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  162 (280)
T PLN02253         90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-------  162 (280)
T ss_pred             HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-------
Confidence            999999999999997532  34556788999999999999999999999999987777899999998876543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|+++|++++.+++.++.++  ++|+||+|+||+++|++.
T Consensus       163 -----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~  206 (280)
T PLN02253        163 -----------------------------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALA  206 (280)
T ss_pred             -----------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccc
Confidence                                               445689999999999999999998  689999999999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.7e-34  Score=244.64  Aligned_cols=185  Identities=24%  Similarity=0.328  Sum_probs=159.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+...   +++...     .+.++++|++++++++++++++.+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK-----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC-----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999998877654322   223222     167889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+           
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------  144 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT-----------  144 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC-----------
Confidence            999999999999987666666778999999999999999999999999998777789999999766521           


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    +.++...|++||+|+++++++++.++  .+|+||+|+||+|+|++.
T Consensus       145 ------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~  190 (255)
T PRK06463        145 ------------------------------AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMT  190 (255)
T ss_pred             ------------------------------CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchh
Confidence                                          11456789999999999999999998  589999999999999985

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-34  Score=243.56  Aligned_cols=183  Identities=26%  Similarity=0.386  Sum_probs=162.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+..+      .  ...   ..+.++++|++++++++++++++
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~~~---~~~~~~~~D~~~~~~~~~~~~~~   69 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--VDG---RPAEFHAADVRDPDQVAALVDAI   69 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--hcC---CceEEEEccCCCHHHHHHHHHHH
Confidence            788999999999999999999999999999999999998754      1  111   23778999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++.+.|.++ +.|+||++||..+..+.       
T Consensus        70 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  142 (252)
T PRK07856         70 VERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-------  142 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-------
Confidence            9999999999999998766666677889999999999999999999999999764 45899999998876553       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|+++|++++.+++.++.++ +.|+||+|+||+|+|++.
T Consensus       143 -----------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~  185 (252)
T PRK07856        143 -----------------------------------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQS  185 (252)
T ss_pred             -----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHH
Confidence                                               567899999999999999999998 569999999999999975

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=9.6e-34  Score=230.09  Aligned_cols=224  Identities=26%  Similarity=0.355  Sum_probs=187.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC-CCEE-EEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASK-GITV-VLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~-g~~v-i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      -|.++||||++|||..++++|++. |-++ +.++||++++   .+++........|++++++|+++.+++.++++++.+.
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            456999999999999999999975 5554 4567888876   3444444444556999999999999999999999987


Q ss_pred             c--CCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-----------CeEEEEecCccc
Q 023896           84 F--GKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-----------PRLVNLSSYVSA  149 (275)
Q Consensus        84 ~--g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----------g~iv~vsS~~~~  149 (275)
                      .  ..+|+|+||||+... ......+.+.|-+.+++|..|+..+.|+|+|.+.+...           ..|||+||.++.
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence            4  489999999998654 22334567889999999999999999999999976542           379999998877


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~  227 (275)
                      .+.                                       ....+..+|.+||+|+++++|+++.++  .+|-|.++|
T Consensus       160 ~~~---------------------------------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sih  200 (249)
T KOG1611|consen  160 IGG---------------------------------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIH  200 (249)
T ss_pred             cCC---------------------------------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEec
Confidence            543                                       222557899999999999999999999  478899999


Q ss_pred             CCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          228 PGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       228 pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ||||.|+|......+++++.+..++..+..-....+|.||..+.
T Consensus       201 PGwV~TDMgg~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  201 PGWVQTDMGGKKAALTVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             CCeEEcCCCCCCcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence            99999999998889999999999999998888899999998753

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=242.92  Aligned_cols=187  Identities=23%  Similarity=0.221  Sum_probs=163.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||+++++.|+++|++|++++|+..+.+...+++......  ++..+.+|+++++++.+++++  
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV--DVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC--ceEEEEecCCCHHHHHHHHHH--
Confidence            3578999999999999999999999999999999999998887777777654322  377899999999998887754  


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                        ++++|++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.         
T Consensus        79 --~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  147 (259)
T PRK06125         79 --AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPD---------  147 (259)
T ss_pred             --hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCC---------
Confidence              589999999999876667778899999999999999999999999999988777899999998765443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       +.+..|+++|+++++++++++.|+  .+||||+|+||+++|++.
T Consensus       148 ---------------------------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~  191 (259)
T PRK06125        148 ---------------------------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM  191 (259)
T ss_pred             ---------------------------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH
Confidence                                             556789999999999999999998  589999999999999963

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=242.99  Aligned_cols=188  Identities=22%  Similarity=0.262  Sum_probs=167.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||.+.+|++|||||++|||++++++|+++|++|++++|+..+.+...+++.   .   ++.++++|++++++++++++++
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~   74 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---P---AAIAVSLDVTRQDSIDRIVAAA   74 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---C---ceEEEEccCCCHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999987776655442   1   2778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||+|.....+..+.+.++|++.+++|+.+++.+++++.+.|.+++ +++||++||..+..+.       
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  147 (257)
T PRK07067         75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE-------  147 (257)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-------
Confidence            99999999999999987666666778899999999999999999999999987653 4799999997765443       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|++||++++.+++.++.++  .+|+||+|+||+++|++.
T Consensus       148 -----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~  191 (257)
T PRK07067        148 -----------------------------------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMW  191 (257)
T ss_pred             -----------------------------------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhh
Confidence                                               567899999999999999999997  689999999999999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=241.47  Aligned_cols=224  Identities=23%  Similarity=0.276  Sum_probs=188.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++...+..   +.++.+|+++++++.++++++.
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA---AEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777777654332   7889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.+++|++||..+..+.         
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------  154 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---------  154 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC---------
Confidence            99999999999999876666777889999999999999999999999999987777999999998876554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  ++++||+|+||+++|++....
T Consensus       155 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  201 (256)
T PRK06124        155 ---------------------------------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM  201 (256)
T ss_pred             ---------------------------------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh
Confidence                                             567899999999999999999998  689999999999999874321


Q ss_pred             -----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                       ...++++.++..+.++.......+|.++..+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~d  249 (256)
T PRK06124        202 AADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVD  249 (256)
T ss_pred             ccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEEC
Confidence                             1235666666666655544444556655544

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-34  Score=246.01  Aligned_cols=190  Identities=23%  Similarity=0.280  Sum_probs=165.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+. ...+...+++...+.   ++.++.+|+++.+++.++++++.
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG---EAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999998854 445555566654432   27789999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|++|||||.....+..+.+.+.|++.+++|+.+++.+++.+++.|.+.+ .|+||++||..+..+.        
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~--------  152 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW--------  152 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC--------
Confidence            9999999999999987666666788999999999999999999999999997654 5899999997765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       153 ----------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        153 ----------------------------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             ----------------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence                                              667899999999999999999998  6899999999999999853

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-35  Score=255.08  Aligned_cols=191  Identities=19%  Similarity=0.213  Sum_probs=147.3

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHH----------hcCCC--CCceeEEEecc
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK----------ASGVD--PELLLFHQLDI   67 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~----------~~~~~--~~~~~~~~~Dl   67 (275)
                      .+++||++|||||+  +|||+++|+.|+++|++|++.++.+ .+....+...          ..+..  ..++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            45689999999996  9999999999999999999987652 1111111100          00000  00011122333


Q ss_pred             cCh------------------HHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHH
Q 023896           68 SDL------------------ASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEA  127 (275)
Q Consensus        68 ~~~------------------~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  127 (275)
                      ++.                  ++++++++++.++||++|+||||||...  ..++.+.+.++|++.+++|+.|+++++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            333                  3689999999999999999999998643  45677889999999999999999999999


Q ss_pred             HhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCc-hhhHhHHH
Q 023896          128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAV  206 (275)
Q Consensus       128 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a  206 (275)
                      ++|.|++  .|+||++||+.+..+.                                          ++.. .|++||+|
T Consensus       163 ~~p~m~~--~G~ii~iss~~~~~~~------------------------------------------p~~~~~Y~asKaA  198 (299)
T PRK06300        163 FGPIMNP--GGSTISLTYLASMRAV------------------------------------------PGYGGGMSSAKAA  198 (299)
T ss_pred             HHHHhhc--CCeEEEEeehhhcCcC------------------------------------------CCccHHHHHHHHH
Confidence            9999964  4799999998776543                                          4443 79999999


Q ss_pred             HHHHHHHHHHhC--C-CeEEEeecCCeeecCCcC
Q 023896          207 INAYTRILAKRY--P-KFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       207 ~~~~~~~~a~~~--~-~i~vn~v~pG~v~T~~~~  237 (275)
                      +++|+++++.|+  + |||||+|+||+++|++..
T Consensus       199 l~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        199 LESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             HHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence            999999999998  3 899999999999999863

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=241.08  Aligned_cols=222  Identities=26%  Similarity=0.240  Sum_probs=183.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++.+|++|||||++|||.+++++|+++|++|++++|+... ....+++..     ..+..+++|+++++++.++++++.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLG-----GNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhC-----CceEEEEecCCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999998764 222333321     126689999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||+|.....+..+.+.+++++.+++|+.+++++++.+.|.|.+++.++||++||..+..+.         
T Consensus        85 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  155 (255)
T PRK06841         85 SAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL---------  155 (255)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC---------
Confidence            99999999999999876666667788999999999999999999999999987777899999998776554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       +....|+++|++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       156 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~  202 (255)
T PRK06841        156 ---------------------------------ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA  202 (255)
T ss_pred             ---------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc
Confidence                                             567789999999999999999998  589999999999999975321


Q ss_pred             ----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                      ...++++.++..+.++.......+|..+..++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        203 WAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             cchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence                            12466677777776666555556666665543

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-34  Score=243.67  Aligned_cols=184  Identities=21%  Similarity=0.237  Sum_probs=161.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+..+++...+++.....   ++.++++|++++++++++++++.+.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG---QVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999998887777666654332   388899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++++++++++.|.+. ..|+||++||..+..+.            
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------  145 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------------  145 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------------
Confidence            99999999987655566678899999999999999999999999998654 35899999998776543            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCeeecC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v~T~  234 (275)
                                                    +....|+++|++++++++.++.++   .|++||+|+||+++|.
T Consensus       146 ------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        146 ------------------------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             ------------------------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence                                          456789999999999999999997   3899999999999953

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=246.52  Aligned_cols=192  Identities=27%  Similarity=0.333  Sum_probs=165.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.. .....+++...+   .++.++++|++++++++++++++
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG---HRCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC---CceEEEECCCCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999875 334444444332   23778999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++||++||+.+...         
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------  147 (263)
T PRK08226         77 KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV---------  147 (263)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---------
Confidence            99999999999999987666666778899999999999999999999999987766789999999765321         


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                      +.++...|+++|++++++++.++.++  ++++||+|+||+++|++..
T Consensus       148 --------------------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~  194 (263)
T PRK08226        148 --------------------------------ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE  194 (263)
T ss_pred             --------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHH
Confidence                                            11456789999999999999999998  5899999999999999753

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=5.3e-34  Score=245.26  Aligned_cols=185  Identities=30%  Similarity=0.388  Sum_probs=160.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||++|||++++++|+++|++|++++|+..+.+...+++   .   .++.++++|+++.+++.++++++.+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~---~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---G---ENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---C---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999887665544433   1   1277899999999999999999999


Q ss_pred             hcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.|.|.++ .++||++||..+..+.        
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~--------  151 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSE--------  151 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCC--------
Confidence            99999999999997543  345567889999999999999999999999999765 4799999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                                                        +....|+++|++++.+++.++.++ ++++||+|+||+++|++.
T Consensus       152 ----------------------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        152 ----------------------------------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP  194 (255)
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence                                              556789999999999999999998 679999999999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-34  Score=244.50  Aligned_cols=185  Identities=26%  Similarity=0.301  Sum_probs=159.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.. .....+++...+..   +.++++|+++.+++.++++++.+
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGE---ALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCe---EEEEEEeCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999853 34444555443322   77899999999999999999999


Q ss_pred             hcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|++|||||... ..++.+.+.++|++.+++|+++++.+++.++|.|++++.++||++||..+..           
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  149 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-----------  149 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-----------
Confidence            9999999999998643 3456677889999999999999999999999999887778999999976431           


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                       .....|++||++++.+++.++.++  .+|+||+|+||+|+|++
T Consensus       150 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        150 ---------------------------------INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             ---------------------------------CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence                                             234579999999999999999998  58999999999999986

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.2e-34  Score=269.01  Aligned_cols=217  Identities=27%  Similarity=0.314  Sum_probs=178.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+|++|||||++|||++++++|+++|++|++++|+..+++...+++.   .   +...+++|++++++++++++++.++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG---D---EHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---ceeEEEccCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999887776665442   1   2667899999999999999999999


Q ss_pred             cCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +|+||+||||||... ..++.+.+.++|++++++|+.+++++++.++|.|  .+.|+||++||.++..+.          
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~----------  408 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLAL----------  408 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCC----------
Confidence            999999999999753 3456678899999999999999999999999999  345899999998887654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|+++|+++++|++.++.++  .+||||+|+||+|+|++.... 
T Consensus       409 --------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~  456 (520)
T PRK06484        409 --------------------------------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK  456 (520)
T ss_pred             --------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc
Confidence                                            667899999999999999999998  589999999999999975321 


Q ss_pred             -----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                       ...+|++.++.++.++.......+|..+..+
T Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vd  504 (520)
T PRK06484        457 ASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVD  504 (520)
T ss_pred             cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence                             1135666666666555443344455544443

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-33  Score=237.76  Aligned_cols=227  Identities=25%  Similarity=0.247  Sum_probs=192.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|+++||||++|||++++++|+++|++|++++|+..+.....++++..+.   ++.++++|+++++++.++++++
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   78 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG---RAHAIAADLADPASVQRFFDAA   78 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHH
Confidence            5567799999999999999999999999999999999999888777777755432   3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|.....++.+.+.+.+++.+++|+.+++.+++.+.+.|.+++.|++|++||..+..+.        
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  150 (250)
T PRK12939         79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA--------  150 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC--------
Confidence            999999999999999877666777889999999999999999999999999988778899999997776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +....|+++|++++.+++.++.++  ++++|+.|+||+++|++...
T Consensus       151 ----------------------------------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        151 ----------------------------------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             ----------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence                                              556789999999999999999998  68999999999999997532


Q ss_pred             C----------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      .                ...++++.++..+.++..+....+|.++..+..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        197 VPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGG  246 (250)
T ss_pred             cCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            1                125677788777776665445566777666553

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-33  Score=244.95  Aligned_cols=213  Identities=23%  Similarity=0.300  Sum_probs=179.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.++...+++...+..   +.++++|+++.+++.++++++.
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~---~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD---AMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998888877777654332   7789999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhcc--chhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQ--TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++++|++|||||.....++.+.  +.++++..+++|++|++.++++++|.|++++.++||++||..+...        
T Consensus       113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------  184 (293)
T PRK05866        113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE--------  184 (293)
T ss_pred             HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC--------
Confidence            999999999999998765544332  4578899999999999999999999998888899999999654321        


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ..++...|+++|++++++++.++.|+  .+|+|++|+||+|+|++..
T Consensus       185 ---------------------------------~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~  231 (293)
T PRK05866        185 ---------------------------------ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA  231 (293)
T ss_pred             ---------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence                                             11556789999999999999999998  5899999999999999864


Q ss_pred             CC------CCCChhhhhccceeecccC
Q 023896          238 HA------GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 ~~------~~~~~~~~a~~~~~~~~~~  258 (275)
                      ..      ..++|++.++.++..+...
T Consensus       232 ~~~~~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        232 PTKAYDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             ccccccCCCCCCHHHHHHHHHHHHhcC
Confidence            32      2468999988877766543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-33  Score=239.14  Aligned_cols=223  Identities=25%  Similarity=0.252  Sum_probs=187.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEE-EecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      |.+|++|||||++|||++++++|+++|++|++ .+|+..+.+...++++..+..   +.++.+|+++++++.++++++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK---ALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999876 578887777777777654332   78899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||+|.....++.+.+.++++..+++|+.+++.+++++.+.|.+++.|+||++||..+..+.          
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  148 (250)
T PRK08063         79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL----------  148 (250)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC----------
Confidence            9999999999999876667777889999999999999999999999999988778899999997655432          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|+++|++++.++++++.++  .++++|+|+||+++|++.... 
T Consensus       149 --------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~  196 (250)
T PRK08063        149 --------------------------------ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP  196 (250)
T ss_pred             --------------------------------CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc
Confidence                                            556789999999999999999998  689999999999999874311 


Q ss_pred             ----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                      ...++++.++.++.++..+....+|..+..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        197 NREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             CchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence                            13577888888777666555555666665554

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=239.91  Aligned_cols=224  Identities=25%  Similarity=0.284  Sum_probs=187.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||++|||.+++++|+++|++|++++|+.++.+...+.+...+.   ++.++.+|+++++++.++++++.+.
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGR---RAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998887777777654432   3788999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++++|++|||||......+.+.+.+++++.+++|+.+++.+++++.+.|.+ .+.++||++||..+..+.          
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  154 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG----------  154 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----------
Confidence            999999999999765555667889999999999999999999999999976 456899999998877554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCCC--
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                      ++...|+++|++++.+++.++.++ +++++|+|+||++.|++....  
T Consensus       155 --------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~  202 (263)
T PRK07814        155 --------------------------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA  202 (263)
T ss_pred             --------------------------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC
Confidence                                            567889999999999999999998 789999999999999864321  


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                     ...++++.++.++.+........+|..+..++.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        203 NDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence                           123567777777776654445566666665543

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2e-33  Score=249.49  Aligned_cols=210  Identities=22%  Similarity=0.254  Sum_probs=170.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++++||||++|||++++++|+++|++|++++|+.++++...+++...... .++..+.+|+++  ++.+.++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~-~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSK-TQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC-cEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            5899999999999999999999999999999999999998888888654322 237788999985  2333444444444


Q ss_pred             C--CccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           85 G--KLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        85 g--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +  ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+....        
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------  200 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------  200 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------
Confidence            4  46699999997643  34557788999999999999999999999999988888999999998775310        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ..+....|++||+++++++++++.|+  .||+|++|+||+|+|++...
T Consensus       201 --------------------------------~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~  248 (320)
T PLN02780        201 --------------------------------SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI  248 (320)
T ss_pred             --------------------------------CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc
Confidence                                            01567899999999999999999998  58999999999999998652


Q ss_pred             C----CCCChhhhhccceeeccc
Q 023896          239 A----GILSVEEGAESPVKLALL  257 (275)
Q Consensus       239 ~----~~~~~~~~a~~~~~~~~~  257 (275)
                      .    ...+|++.++..++.+..
T Consensus       249 ~~~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        249 RRSSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCC
Confidence            1    235889999888877653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=5.5e-33  Score=246.24  Aligned_cols=253  Identities=23%  Similarity=0.258  Sum_probs=186.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+|++|||||++|||++++++|+++| ++|++++|+..+.++..+++....   .++..+++|+++.++++++++++.+.
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   78 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPK---DSYTIMHLDLGSLDSVRQFVQQFRES   78 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            37899999999999999999999999 999999999988877776664322   23778899999999999999999888


Q ss_pred             cCCccEEEcCCcccccc-hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHH--H
Q 023896           84 FGKLDILTKGDAEVDWS-KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA--R  158 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~--~  158 (275)
                      ++++|++|||||+.... +....+.++|+.++++|+++++.+++.++|.|++++  .++||++||..+..+......  .
T Consensus        79 ~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        79 GRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            89999999999975432 223457899999999999999999999999998764  479999999887543210000  0


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCee-ecC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFV-KTD  234 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v-~T~  234 (275)
                      ..+.++.        .....+.   ....+.......+...|++||+++..+++.+++++   ++|+|++|+||+| +|+
T Consensus       159 ~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~  227 (314)
T TIGR01289       159 ANLGDLS--------GLAAGFK---APIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTG  227 (314)
T ss_pred             ccccccc--------cccccCC---CcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCc
Confidence            0000000        0000000   00000011122445689999999999999999987   4799999999999 698


Q ss_pred             CcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          235 INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       235 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      +....                 ...++++.++.++..+..+.....|.||..++
T Consensus       228 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       228 LFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             ccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            86421                 14688888888888777666556788887543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3.1e-35  Score=251.03  Aligned_cols=215  Identities=29%  Similarity=0.350  Sum_probs=181.7

Q ss_pred             cCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc-CCccE
Q 023896           13 GSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-GKLDI   89 (275)
Q Consensus        13 Ga~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~id~   89 (275)
                      |++  +|||++++++|+++|++|++++|+.++++...+++......    .++++|++++++++++++++.+.+ |+||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~----~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA----EVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS----EEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC----ceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            666  99999999999999999999999999887777777765442    259999999999999999999999 99999


Q ss_pred             EEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           90 LTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        90 li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|||+|....    .++.+.+.++|+..+++|+++++.+++++.|.|++.  |+||++||..+..+.             
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~-------------  141 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPM-------------  141 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBS-------------
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccC-------------
Confidence            9999988765    667778899999999999999999999999988754  799999998776554             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-C--CeEEEeecCCeeecCCcCCCCC-
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHAGI-  241 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~--~i~vn~v~pG~v~T~~~~~~~~-  241 (275)
                                                   +++..|+++|++++.++|+++.|+ +  |||||+|+||+|+|++...... 
T Consensus       142 -----------------------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~  192 (241)
T PF13561_consen  142 -----------------------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN  192 (241)
T ss_dssp             -----------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH
T ss_pred             -----------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc
Confidence                                         677899999999999999999999 6  8999999999999997532210 


Q ss_pred             --CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          242 --LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       242 --~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                        +........|+++..+|++++....||.++.++|
T Consensus       193 ~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~  228 (241)
T PF13561_consen  193 EEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASY  228 (241)
T ss_dssp             HHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTT
T ss_pred             cchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccC
Confidence              1111223467777777888888888888887765

...

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=242.02  Aligned_cols=220  Identities=22%  Similarity=0.225  Sum_probs=181.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+...            ..+..+++|++++++++++++++.
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH------------ENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc------------CceEEEEccCCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999998754321            127788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccch---------hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           82 TQFGKLDILTKGDAEVDWSK---------VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      +.++++|++|||||......         ..+.+.++|++++++|+.+++.+++++.++|.+++.++||++||..+..+.
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS  152 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC
Confidence            99999999999999753321         234688999999999999999999999999987777899999998876543


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|+++|++++.+++.++.++  .+||||+|+||+
T Consensus       153 ------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~  190 (266)
T PRK06171        153 ------------------------------------------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGI  190 (266)
T ss_pred             ------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccc
Confidence                                                      567899999999999999999998  589999999999


Q ss_pred             ee-cCCcCCC--------CCCChhhhh-------ccceeecccCCCCCcceEeccCcccCC
Q 023896          231 VK-TDINFHA--------GILSVEEGA-------ESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       231 v~-T~~~~~~--------~~~~~~~~a-------~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ++ |++....        ...++++..       ..++.+..+|++++....|++++.++|
T Consensus       191 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~  251 (266)
T PRK06171        191 LEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASY  251 (266)
T ss_pred             cccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeecccccc
Confidence            97 6653211        001122211       346778888899999999999887764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=9.9e-34  Score=240.76  Aligned_cols=180  Identities=19%  Similarity=0.263  Sum_probs=155.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+.....   +.+...+     +.++.+|+++.+++.++++++.+.++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG-----AQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC-----CEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            579999999999999999999999999999999876433   2332221     56789999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ++|++|||||........+.+.++|++.+++|+.+++.+++.+.|.|++.+  .++||++||..+..+.           
T Consensus        74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----------  142 (236)
T PRK06483         74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS-----------  142 (236)
T ss_pred             CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-----------
Confidence            999999999975444444567899999999999999999999999998765  5799999997765443           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~  235 (275)
                                                     ++...|+++|++++.+++.++.++ ++||||+|+||++.|+.
T Consensus       143 -------------------------------~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~  184 (236)
T PRK06483        143 -------------------------------DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNE  184 (236)
T ss_pred             -------------------------------CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCC
Confidence                                           567889999999999999999998 67999999999998764

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=9.7e-33  Score=237.62  Aligned_cols=220  Identities=23%  Similarity=0.271  Sum_probs=179.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++|||||++|||++++++|+++|++|++++| +.+..+...+++...+..   +..+.+|+++.++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR---AEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998865 555666666666554332   8889999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +++|++|||+|......+.+.+.++|++.+++|+.+++.+++++.+.|.+++ .|+||++||..+..+.           
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------  147 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-----------  147 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-----------
Confidence            9999999999987665566778999999999999999999999999996543 5799999998766543           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC--
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                     ++...|+++|++++.++++++.++  .+|+||+|+||+++|++....  
T Consensus       148 -------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~  196 (256)
T PRK12743        148 -------------------------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS  196 (256)
T ss_pred             -------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh
Confidence                                           567899999999999999999998  589999999999999975321  


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                   ...++++.++.++.++.......+|.++..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  240 (256)
T PRK12743        197 DVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVD  240 (256)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence                         1235666666666555444444555555444

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=239.42  Aligned_cols=188  Identities=24%  Similarity=0.308  Sum_probs=165.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||.+++++|+++|++|++++|+...+....+++...+.   ++.++++|+++++++.++++++
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP---EGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---ceEEEECCCCCHHHHHHHHHHH
Confidence            6788899999999999999999999999999999999998877776666654432   2678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|+++ +|+||++||..+..+.        
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~--------  151 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPM--------  151 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCC--------
Confidence            9999999999999987655566677889999999999999999999999999755 4899999998776443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee-cC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK-TD  234 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~-T~  234 (275)
                                                        ++...|+++|++++.+++.++.++  .+++|++|+||+++ |+
T Consensus       152 ----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~  194 (264)
T PRK07576        152 ----------------------------------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTE  194 (264)
T ss_pred             ----------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcH
Confidence                                              667889999999999999999998  68999999999996 55

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=6.2e-33  Score=242.50  Aligned_cols=192  Identities=28%  Similarity=0.340  Sum_probs=170.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+...++...+++...+.   ++.++.+|+++.++++++++++
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~   77 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA---EVLGVRTDVSDAAQVEALADAA   77 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHH
Confidence            7788999999999999999999999999999999999998887777777654422   3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC------CeEEEEecCccccCCCc
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS------PRLVNLSSYVSALKDLP  154 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------g~iv~vsS~~~~~~~~~  154 (275)
                      .+.++++|+||||||.....+..+.+.++|++.+++|+.++++++++++|.|.++..      ++||++||..+..+.  
T Consensus        78 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--  155 (287)
T PRK06194         78 LERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP--  155 (287)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--
Confidence            999999999999999877666667788999999999999999999999999986654      799999998877543  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCe
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGF  230 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~  230 (275)
                                                              ++...|+++|++++.+++.++.++    .++|+++++||+
T Consensus       156 ----------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~  195 (287)
T PRK06194        156 ----------------------------------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYF  195 (287)
T ss_pred             ----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCc
Confidence                                                    566789999999999999999987    369999999999


Q ss_pred             eecCCcC
Q 023896          231 VKTDINF  237 (275)
Q Consensus       231 v~T~~~~  237 (275)
                      |.|++..
T Consensus       196 i~t~~~~  202 (287)
T PRK06194        196 VPTGIWQ  202 (287)
T ss_pred             ccCcccc
Confidence            9998753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.7e-33  Score=244.14  Aligned_cols=222  Identities=23%  Similarity=0.202  Sum_probs=180.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|++|||||++|||++++++|+++|++|++.+++. ...+...+++...+.   ++.++++|+++.+++.++++++
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~---~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGA---KAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCC---eEEEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998754 455666667765433   3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-------CCCeEEEEecCccccCCC
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-------DSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~~g~iv~vsS~~~~~~~~  153 (275)
                      .+ +|++|+||||||......+.+.+.++|++.+++|+.+++++++++.++|+++       ..|+||++||..+..+. 
T Consensus        85 ~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  162 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-  162 (306)
T ss_pred             HH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-
Confidence            88 9999999999998766666677889999999999999999999999998743       13799999998876543 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               ++...|+++|++++.+++.++.++  .+|+||+|+||. 
T Consensus       163 -----------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-  200 (306)
T PRK07792        163 -----------------------------------------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-  200 (306)
T ss_pred             -----------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-
Confidence                                                     566789999999999999999998  589999999994 


Q ss_pred             ecCCcCCC------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          232 KTDINFHA------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       232 ~T~~~~~~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .|+|....            ..++|++.+..+..++.......+|..|..+
T Consensus       201 ~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~  251 (306)
T PRK07792        201 RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVY  251 (306)
T ss_pred             CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEc
Confidence            78764221            1346777777766665543444555555543

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=233.90  Aligned_cols=193  Identities=22%  Similarity=0.289  Sum_probs=167.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC--hHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD--LASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~   78 (275)
                      |..+++|+++||||++|||++++++|+++|++|++++|+..+.+...+++.......  ...+++|+++  .+++.++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~--~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPE--PFAIRFDLMSAEEKEFEQFAA   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCC--cceEEeeecccchHHHHHHHH
Confidence            778899999999999999999999999999999999999988887777776543322  6678899986  568899999


Q ss_pred             HHHhhc-CCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           79 FIKTQF-GKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        79 ~~~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++.+.+ +++|++|||||... ..++.+.+.++|.+.+++|+++++.+++.++|.|.+.+.+++|++||..+..+.    
T Consensus        79 ~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----  154 (239)
T PRK08703         79 TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK----  154 (239)
T ss_pred             HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC----
Confidence            998888 89999999999743 245567788999999999999999999999999987777899999997766543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCeeec
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKT  233 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v~T  233 (275)
                                                            ++...|++||++++.+++.++.++   +++|||.|+||+|+|
T Consensus       155 --------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t  196 (239)
T PRK08703        155 --------------------------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINS  196 (239)
T ss_pred             --------------------------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccC
Confidence                                                  556789999999999999999998   269999999999999


Q ss_pred             CCcC
Q 023896          234 DINF  237 (275)
Q Consensus       234 ~~~~  237 (275)
                      ++..
T Consensus       197 ~~~~  200 (239)
T PRK08703        197 PQRI  200 (239)
T ss_pred             cccc
Confidence            9854

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.6e-33  Score=245.56  Aligned_cols=251  Identities=22%  Similarity=0.220  Sum_probs=183.3

Q ss_pred             EEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896           10 VVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      |||||++|||++++++|+++| ++|++++|+.++.+...+++....   .++.++++|+++.++++++++++.+.++++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPK---DSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 999999999988777766664322   2377889999999999999999998889999


Q ss_pred             EEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           89 ILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        89 ~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +||||||+... .+..+.+.++|++.|++|++|++.+++.++|.|.+++  .|+||++||..+..+.....      ..+
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~------~~~  151 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGN------VPP  151 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccc------CCC
Confidence            99999997533 2344678899999999999999999999999998765  58999999988754311000      000


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCee-ecCCcCCC--
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFV-KTDINFHA--  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v-~T~~~~~~--  239 (275)
                      ..+..++..+........ ...+.....+.+...|++||+|+..+++.+++++   .+|+||+|+||+| .|+|....  
T Consensus       152 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        152 KANLGDLRGLAGGLNGLN-SSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             ccchhhhhhhhcccCCcc-chhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH
Confidence            000000000000000000 0000000112345689999999889999999997   4899999999999 78885421  


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                     ...+|++.++.++.++..+....+|.||..+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        231 LFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             HHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccC
Confidence                           1468899999888888776666788888654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.1e-33  Score=238.94  Aligned_cols=189  Identities=24%  Similarity=0.284  Sum_probs=163.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      |++|++|||||++|||++++++|+++|++|++. .|+..+.+...+++...+.   ++..+.+|+++.+++.++++++.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGF---DFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999998885 4555555555555544332   277889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||.....++.+.+.++|++++++|+.+++.+++++.+.|.+++.++||++||..+..+.          
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  147 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------  147 (246)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC----------
Confidence            9999999999999866556667889999999999999999999999999987777899999998776543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                      ++...|+++|++++.+++.++.++  .++++|+|+||+++|++..
T Consensus       148 --------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~  192 (246)
T PRK12938        148 --------------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK  192 (246)
T ss_pred             --------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh
Confidence                                            567889999999999999999998  6899999999999999754

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=244.43  Aligned_cols=228  Identities=26%  Similarity=0.249  Sum_probs=180.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.+...+++..       +.++++|+++.++++++++++.+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~-------v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG-------VEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhh-------CeEEEccCCCHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999998877776665531       67889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|+||||||.....  ...+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+....+      
T Consensus        96 ~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~------  167 (315)
T PRK06196         96 SGRRIDILINNAGVMACP--ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD------  167 (315)
T ss_pred             cCCCCCEEEECCCCCCCC--CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc------
Confidence            999999999999975422  245678899999999999999999999999877778999999975543211000      


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                      +                        .....+.++...|+.||++++.+++.++.++  ++|+||+|+||+|.|++.... 
T Consensus       168 ~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~  223 (315)
T PRK06196        168 D------------------------PHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLP  223 (315)
T ss_pred             c------------------------cCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCC
Confidence            0                        0001122445789999999999999999998  589999999999999975321 


Q ss_pred             -------------------CCCChhhhhccceeecccCCC-CCcceEecc
Q 023896          240 -------------------GILSVEEGAESPVKLALLPDG-GPTGRFFLR  269 (275)
Q Consensus       240 -------------------~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~  269 (275)
                                         ...++++.+...+.++..+.. ...|.|+..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        224 REEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             hhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCC
Confidence                               134678888888887766553 355666543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.8e-34  Score=224.00  Aligned_cols=221  Identities=22%  Similarity=0.158  Sum_probs=185.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++.|+++++||+..|||+++++.|++.|++||.+.|++..+..+.++....      +..++.|+++++.+.+++.    
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~------I~Pi~~Dls~wea~~~~l~----   73 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL------IIPIVGDLSAWEALFKLLV----   73 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc------eeeeEecccHHHHHHHhhc----
Confidence            457999999999999999999999999999999999999888887765433      7889999999777665554    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh-cCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ..+++|.++||||+.-..++.+.+.++++..|++|+.+.+.+.|...+-+. +...|.|||+||.++.++.         
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~---------  144 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL---------  144 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc---------
Confidence            347899999999998888999999999999999999999999998655433 3346899999999988775         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                       .+...|+++|+|+.+++|++|.|+  ++||||+|.|..|.|.|... 
T Consensus       145 ---------------------------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dn  191 (245)
T KOG1207|consen  145 ---------------------------------DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDN  191 (245)
T ss_pred             ---------------------------------CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccc
Confidence                                             678899999999999999999999  68999999999999999753 


Q ss_pred             CCC--CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGI--LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      |+.  .......+.|+.++.+.++..+...|+.++.+++
T Consensus       192 WSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssm  230 (245)
T KOG1207|consen  192 WSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSM  230 (245)
T ss_pred             cCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCc
Confidence            321  1222234567777887888899999999988765

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=232.49  Aligned_cols=214  Identities=25%  Similarity=0.280  Sum_probs=184.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |...++|+++||||++|||++++++|+++|++|++++|+.++.+...+++.....   ++.++++|+++.+++.++++++
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV---KAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCC---cEEEEEccCCCHHHHHHHHHHH
Confidence            5555678999999999999999999999999999999999887777777665432   3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.        
T Consensus        78 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  149 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--------  149 (241)
T ss_pred             HHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC--------
Confidence            999999999999999876666667788999999999999999999999999987777899999998765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+.+|++++.+++.++.++  .++++++|.||+++|++...
T Consensus       150 ----------------------------------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~  195 (241)
T PRK07454        150 ----------------------------------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT  195 (241)
T ss_pred             ----------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc
Confidence                                              556789999999999999999997  58999999999999997432


Q ss_pred             ---------CCCCChhhhhccceeecccCC
Q 023896          239 ---------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                               ....++++.++.++.++..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        196 ETVQADFDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             cccccccccccCCCHHHHHHHHHHHHcCCc
Confidence                     124688899988888777664

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=240.77  Aligned_cols=181  Identities=28%  Similarity=0.328  Sum_probs=157.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+....         ..   ..+.++++|++++++++++++++.+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~---~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LP---EGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cC---CceeEEecCCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999987531         11   1277899999999999999999999


Q ss_pred             hcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++|++|||||...  ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||+.+..+.        
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------  145 (260)
T PRK06523         74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL--------  145 (260)
T ss_pred             HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC--------
Confidence            9999999999999643  234556788999999999999999999999999988777899999998765432        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       +++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       146 ---------------------------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~  190 (260)
T PRK06523        146 ---------------------------------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA  190 (260)
T ss_pred             ---------------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence                                             1256789999999999999999998  589999999999999975

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=242.62  Aligned_cols=241  Identities=21%  Similarity=0.213  Sum_probs=171.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|+++|||+ +|||++++++|+ +|++|++++|+..+++...+++...+.   ++.++++|+++++++.++++++ ++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dv~d~~~i~~~~~~~-~~~g   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGF---DVSTQEVDVSSRESVKALAATA-QTLG   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEeecCCHHHHHHHHHHH-HhcC
Confidence            689999998 699999999996 799999999998887777777654332   3788999999999999999988 5689


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC-CcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~~~~~~  164 (275)
                      ++|++|||||...       ..++|++++++|+.+++++++.+.|.|.+  .+++|++||.++..+. ..........  
T Consensus        76 ~id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~--  144 (275)
T PRK06940         76 PVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALA--  144 (275)
T ss_pred             CCCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhcccc--
Confidence            9999999999742       23679999999999999999999999964  3688999998876532 0000000000  


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhh-hcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-C
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIA-NRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-G  240 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-~  240 (275)
                       ..+..++...           ... .....++...|++||+|++.+++.++.++  .+||||+|+||+|+|++.... .
T Consensus       145 -~~~~~~~~~~-----------~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~  212 (275)
T PRK06940        145 -TTPTEELLSL-----------PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELN  212 (275)
T ss_pred             -cccccccccc-----------ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhc
Confidence             0000000000           000 00000235689999999999999999998  689999999999999986321 1


Q ss_pred             CCChh----hhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSVE----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~~----~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ....+    .....++++..+|++.+....|+.++.++|
T Consensus       213 ~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~  251 (275)
T PRK06940        213 GPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSF  251 (275)
T ss_pred             CCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCc
Confidence            01111    112345566667777777777777776654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=235.49  Aligned_cols=227  Identities=23%  Similarity=0.295  Sum_probs=188.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||+|+||++++++|+++|++|++++|++.+.+...+++...+.   ++.++++|+++.++++++++++
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   78 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG---KAIGVAMDVTNEDAVNAGIDKV   78 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCc---eEEEEECCCCCHHHHHHHHHHH
Confidence            4457899999999999999999999999999999999999888888777765432   2778999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhh-hcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||+|..........+.+.+++.+++|+.+++.+++.+++.| ++.+.++||++||..+..+.       
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-------  151 (262)
T PRK13394         79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-------  151 (262)
T ss_pred             HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-------
Confidence            9999999999999998766555667788999999999999999999999999 66667899999997665433       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         +....|+++|++++.+++.++.++  .++++|+|+||+++|++..
T Consensus       152 -----------------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~  196 (262)
T PRK13394        152 -----------------------------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD  196 (262)
T ss_pred             -----------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh
Confidence                                               556789999999999999999997  5899999999999998632


Q ss_pred             CC---------------------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          238 HA---------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       238 ~~---------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      ..                           ...++++.++.++.++..+....+|.+|..+..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        197 KQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             hhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            10                           134667777777666654444456777766543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.3e-32  Score=243.10  Aligned_cols=259  Identities=23%  Similarity=0.246  Sum_probs=186.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+.+|++|||||++|||.+++++|+++|++|++++|+..+++...+++....   .++.++++|+++.++++++++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~   77 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPP---DSYTIIHIDLGDLDSVRRFVDDF   77 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccC---CceEEEEecCCCHHHHHHHHHHH
Confidence            778889999999999999999999999999999999999988887777764322   23788999999999999999998


Q ss_pred             HhhcCCccEEEcCCcccccc-hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC--CeEEEEecCccccCCCcHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWS-KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS--PRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~iv~vsS~~~~~~~~~~~~  157 (275)
                      .+.++++|+||||||+.... .....+.++++..+++|+.|++.+++.++|.|++++.  ++||++||..+..+..... 
T Consensus        78 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~-  156 (322)
T PRK07453         78 RALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK-  156 (322)
T ss_pred             HHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc-
Confidence            87778999999999975431 2235688999999999999999999999999987653  5999999976543210000 


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCee-ec
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFV-KT  233 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v-~T  233 (275)
                         ..-....+.++.......+..   +....+..++.+...|+.||.+...+++.+++++   .+|+||+++||+| .|
T Consensus       157 ---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        157 ---IPIPAPADLGDLSGFEAGFKA---PISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             ---cCCCCccchhhhhcchhcccc---cccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence               000000000000000000000   0000011123456789999999999999999998   4899999999999 58


Q ss_pred             CCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEecc
Q 023896          234 DINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       234 ~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ++.+...                 ..++++.++..+.++..+....+|.||..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~  283 (322)
T PRK07453        231 PLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSW  283 (322)
T ss_pred             cccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeec
Confidence            8754321                 13555666666666666665678888874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.5e-33  Score=220.92  Aligned_cols=184  Identities=22%  Similarity=0.310  Sum_probs=166.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |.+.|.++|||||++|||++++++|.+.|-+||+++|+..++++..++...       +...+||+.|.++++++++++.
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~-------~~t~v~Dv~d~~~~~~lvewLk   73 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE-------IHTEVCDVADRDSRRELVEWLK   73 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc-------hheeeecccchhhHHHHHHHHH
Confidence            567899999999999999999999999999999999999998887765432       7788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhh--ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVC--YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ++|+.+++||||||+....++.  +...+..++.+.+|+.++..|...++|++.+++.+.||+|||..+..|.       
T Consensus        74 k~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-------  146 (245)
T COG3967          74 KEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-------  146 (245)
T ss_pred             hhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-------
Confidence            9999999999999997765543  3456778899999999999999999999999989999999999998775       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                         .....|+++|+|++.|+.+|+..+  .+|.|.-+.|=.|+|+
T Consensus       147 -----------------------------------~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         147 -----------------------------------ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -----------------------------------cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                                               556789999999999999999988  5899999999999996

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-32  Score=235.91  Aligned_cols=225  Identities=24%  Similarity=0.239  Sum_probs=182.3

Q ss_pred             cccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecC-----------hhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            2 AEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARD-----------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         2 ~~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      +.+++|++|||||++  |||.+++++|+++|++|++++|+           ........+++...+.   ++.++++|++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~   77 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV---RCEHMEIDLS   77 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC---eEEEEECCCC
Confidence            456789999999994  99999999999999999999987           2222223334433222   3888999999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      +++++.++++++.+.++++|++|||||.....+..+.+.+++++.+++|+.+++.+++++.+.|.+++.++||++||..+
T Consensus        78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~  157 (256)
T PRK12748         78 QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS  157 (256)
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence            99999999999999999999999999987666677788899999999999999999999999997767789999999776


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEee
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCV  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v  226 (275)
                      ..+.                                          ++...|+++|++++++++.++.++  ++++|++|
T Consensus       158 ~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i  195 (256)
T PRK12748        158 LGPM------------------------------------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAV  195 (256)
T ss_pred             cCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence            5443                                          556789999999999999999998  68999999


Q ss_pred             cCCeeecCCcCCC------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          227 CPGFVKTDINFHA------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       227 ~pG~v~T~~~~~~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      +||+++|++....            ...++++.++..+.++.......+|.++..+.
T Consensus       196 ~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        196 NPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             EeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            9999999864311            13467788877776665444456677766543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=236.71  Aligned_cols=206  Identities=20%  Similarity=0.262  Sum_probs=175.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||.+++++|+++|++|++++|+.++++...+++....    ++.++++|+++++++.++++++.++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA----RVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC----eeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999887776655553321    388899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhh-ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVC-YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|++|||+|........ +.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.            
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~------------  145 (257)
T PRK07024         78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL------------  145 (257)
T ss_pred             CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC------------
Confidence            999999999975433322 2677899999999999999999999999988888999999998877554            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC--
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG--  240 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~--  240 (275)
                                                    +....|++||++++.+++.++.++  .+++|++|+||+++|++.....  
T Consensus       146 ------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  195 (257)
T PRK07024        146 ------------------------------PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP  195 (257)
T ss_pred             ------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC
Confidence                                          667789999999999999999997  5899999999999999753221  


Q ss_pred             ---CCChhhhhccceeeccc
Q 023896          241 ---ILSVEEGAESPVKLALL  257 (275)
Q Consensus       241 ---~~~~~~~a~~~~~~~~~  257 (275)
                         ..++++.++.++..+..
T Consensus       196 ~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        196 MPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             CCCccCHHHHHHHHHHHHhC
Confidence               25788888777766653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-32  Score=262.68  Aligned_cols=212  Identities=24%  Similarity=0.291  Sum_probs=184.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+.++++|||||++|||++++++|+++|++|++++|+..+++...+.+...+..   +.++.+|+++.+++.++++++.+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV---AHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998888887777655432   88899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .+|++|++|||||......+.+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||+++..+.         
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  459 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS---------  459 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---------
Confidence            999999999999987777777788999999999999999999999999998765 4899999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .||+||+|+||+|+|++....
T Consensus       460 ---------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        460 ---------------------------------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             ---------------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence                                             667899999999999999999998  589999999999999875431


Q ss_pred             -----------------------CCCChhhhhccceeecccCC
Q 023896          240 -----------------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 -----------------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                                             ...+|++.++.++..+....
T Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        507 RFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             ccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence                                   12467777777777665443

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.7e-32  Score=234.10  Aligned_cols=221  Identities=24%  Similarity=0.268  Sum_probs=186.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||+++||.+++++|+++|++|++++|+..+.+...+++...+.   ++.++.+|+++++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG---KAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998877777777765432   2788999999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++ .++||++||..+..+.             
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  144 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-------------  144 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-------------
Confidence            99999999987776777888999999999999999999999999998754 4799999998777554             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                                   +....|+++|++++.+++.++.++  .+|+|++|+||+++|++....    
T Consensus       145 -----------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~  195 (254)
T TIGR02415       145 -----------------------------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET  195 (254)
T ss_pred             -----------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh
Confidence                                         567899999999999999999998  589999999999999975321    


Q ss_pred             ----------------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          240 ----------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       240 ----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                            ...++++.++.+..++..+....+|.++..++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       196 SEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             hhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence                                  134566666666666665555566777666553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=242.90  Aligned_cols=236  Identities=25%  Similarity=0.299  Sum_probs=182.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++..... ...+.++++|+++.++++++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHH
Confidence            4677899999999999999999999999999999999999887777777654321 123788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC-CcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~  159 (275)
                      .+.++++|+||||||.....  ...+.++++..+++|+++++.+++.++|.|++.+.++||++||..+.... .+.+   
T Consensus        90 ~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~---  164 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFD---  164 (306)
T ss_pred             HhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcc---
Confidence            99999999999999975432  24577889999999999999999999999988777899999997654311 0000   


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe--ecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC--VCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~--v~pG~v~T~~  235 (275)
                         +                        .....++++...|+.||++++.+++.++.++  ++++|++  ++||+|+|++
T Consensus       165 ---~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        165 ---D------------------------LQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             ---c------------------------cCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence               0                        0001122456789999999999999999998  5666654  5799999998


Q ss_pred             cCCCC--------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          236 NFHAG--------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       236 ~~~~~--------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .....              ..++++++...+.++..+. ..+|.||..+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~~~~~  265 (306)
T PRK06197        218 ARNLPRALRPVATVLAPLLAQSPEMGALPTLRAATDPA-VRGGQYYGPD  265 (306)
T ss_pred             cccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhcCCC-cCCCeEEccC
Confidence            65321              2356666666666555443 3467777644

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=235.80  Aligned_cols=187  Identities=27%  Similarity=0.267  Sum_probs=162.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+. +..+++...+..   +.++++|+++.+++.++++++.
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR---AEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998766 555666544332   7889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||+|......+.... ++|++.+++|+.+++.+++.+.|.|++. .++||++||..+..+.         
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~---------  147 (258)
T PRK08628         79 AKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ---------  147 (258)
T ss_pred             HhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC---------
Confidence            9999999999999976544443334 8999999999999999999999998754 4899999998776543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||++++.+++.++.++  ++|+||+|+||+|+|++.
T Consensus       148 ---------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~  191 (258)
T PRK08628        148 ---------------------------------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLY  191 (258)
T ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHH
Confidence                                             567899999999999999999987  689999999999999874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-32  Score=233.18  Aligned_cols=187  Identities=22%  Similarity=0.266  Sum_probs=156.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||++|||+++++.|+++|++|+++++ +....+....++.      .++.++++|+++++++.++++++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   74 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG------DRAIALQADVTDREQVQAMFATA   74 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999998765 4444444333321      13788999999999999999999


Q ss_pred             HhhcCC-ccEEEcCCcccc------cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           81 KTQFGK-LDILTKGDAEVD------WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        81 ~~~~g~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      .+.+++ +|++|||||...      ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+. 
T Consensus        75 ~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-  153 (253)
T PRK08642         75 TEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV-  153 (253)
T ss_pred             HHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-
Confidence            999887 999999998632      123556788999999999999999999999999987777899999996554322 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               .+...|+++|++++.+++.+++++  .+||||+|+||++
T Consensus       154 -----------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v  192 (253)
T PRK08642        154 -----------------------------------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLL  192 (253)
T ss_pred             -----------------------------------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeccc
Confidence                                                     445689999999999999999998  6899999999999


Q ss_pred             ecCCc
Q 023896          232 KTDIN  236 (275)
Q Consensus       232 ~T~~~  236 (275)
                      +|+..
T Consensus       193 ~t~~~  197 (253)
T PRK08642        193 RTTDA  197 (253)
T ss_pred             CCchh
Confidence            99754

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=232.72  Aligned_cols=223  Identities=24%  Similarity=0.282  Sum_probs=186.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||+|+||++++++|+++|++|++++|+.+......+++. .+   .++..+++|++++++++++++++.
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~D~~~~~~~~~~~~~i~   76 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AG---GRAFARQGDVGSAEAVEALVDFVA   76 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999887776666554 22   237889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++++|++|||+|........+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.         
T Consensus        77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------  147 (252)
T PRK06138         77 ARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG---------  147 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC---------
Confidence            99999999999999876666667788999999999999999999999999988777899999998766543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+.+|++++.+++.++.++  .++++++++||++.|++....
T Consensus       148 ---------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  194 (252)
T PRK06138        148 ---------------------------------RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI  194 (252)
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence                                             567889999999999999999998  589999999999999874321


Q ss_pred             ---------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                           ...++++.++..+.++..+....+|.++..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  246 (252)
T PRK06138        195 FARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVD  246 (252)
T ss_pred             hccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence                                 0234666666666666555555566655544

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=237.33  Aligned_cols=186  Identities=30%  Similarity=0.377  Sum_probs=163.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+....+...+++   +.   ++.++++|+++.+++.++++.+
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GE---SALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999999987665554443   11   2778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++++.|.|++  .+++|+++|..+..+.        
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~--------  144 (249)
T PRK06500         75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGM--------  144 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCC--------
Confidence            999999999999999876666667889999999999999999999999999853  4689999997766543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        +....|+++|++++++++.++.++  +++++++|+||+++|++.
T Consensus       145 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~  188 (249)
T PRK06500        145 ----------------------------------PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLY  188 (249)
T ss_pred             ----------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHH
Confidence                                              567899999999999999999998  689999999999999974

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-32  Score=231.66  Aligned_cols=222  Identities=23%  Similarity=0.259  Sum_probs=180.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||+||||++++++|+++|++|++++|+....+...+++.....   .+..+.+|+++.++++++++++
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG---TAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHH
Confidence            7889999999999999999999999999999999999998777666666654322   2678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc---cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           81 KTQFGKLDILTKGDAEVD---WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      .+.++++|+||||||...   ..++.+.+.+.+++.+++|+.+++.++++++|.|.+.+.++||++||..+.        
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~--------  149 (250)
T PRK07774         78 VSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW--------  149 (250)
T ss_pred             HHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc--------
Confidence            999999999999999753   234556788999999999999999999999999987777899999997654        


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           .+...|++||++++.+++.++.++  .+++++.++||+++|++
T Consensus       150 -------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  192 (250)
T PRK07774        150 -------------------------------------LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEA  192 (250)
T ss_pred             -------------------------------------CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence                                                 234689999999999999999998  58999999999999998


Q ss_pred             cCCCC----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          236 NFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       236 ~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .....                ..++++.++..+..+..+....+|..|..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~  243 (250)
T PRK07774        193 TRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVD  243 (250)
T ss_pred             ccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEEC
Confidence            54221                235666666665554433333344444433

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=234.00  Aligned_cols=210  Identities=20%  Similarity=0.174  Sum_probs=173.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhH-HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++|++|||||++|||++++++|+++| ++|++++|+.+. ++...+++...+..  .+.++++|++++++++++++++.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGAS--SVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCC--ceEEEEecCCChHHHHHHHHHHHh
Confidence            56899999999999999999999995 899999999886 77777777664432  388999999999999999998876


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                       ++++|++|||+|............+...+.+++|+.+++.+++.++|.|++++.++||++||..+..+.          
T Consensus        85 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~----------  153 (253)
T PRK07904         85 -GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR----------  153 (253)
T ss_pred             -cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------
Confidence             589999999998754322112244556678999999999999999999998888999999998765432          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|++||+++.+|+++++.++  .+++|++|+||+++|++.... 
T Consensus       154 --------------------------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~  201 (253)
T PRK07904        154 --------------------------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK  201 (253)
T ss_pred             --------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC
Confidence                                            456789999999999999999998  589999999999999976532 


Q ss_pred             ---CCCChhhhhccceeecccCC
Q 023896          240 ---GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ---~~~~~~~~a~~~~~~~~~~~  259 (275)
                         ...++++.++.++..+....
T Consensus       202 ~~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        202 EAPLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCCCCCCHHHHHHHHHHHHHcCC
Confidence               24688999988887776544

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1e-31  Score=230.76  Aligned_cols=235  Identities=22%  Similarity=0.186  Sum_probs=183.8

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||++|||++++++|+++|++|++++|+.++.+...+++...... ..+.++++|+++++++.++++++.+.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS-KKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC-CceeEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998888877777543211 12667799999999999999999999


Q ss_pred             cCCccEEEcCCcccc---cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           84 FGKLDILTKGDAEVD---WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        84 ~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++++|++||||+...   ...+.+.+.+.+++.+++|+.+++.++++++|.|++++.++||++||+.+..+...      
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  154 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF------  154 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc------
Confidence            999999999997532   23455678899999999999999999999999998877789999999776543100      


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC-
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF-  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~-  237 (275)
                                                ...+.........|+++|++++++++.++.++  .+++||.|+||++.|+... 
T Consensus       155 --------------------------~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~  208 (256)
T PRK09186        155 --------------------------EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA  208 (256)
T ss_pred             --------------------------hhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH
Confidence                                      00001111223479999999999999999998  6899999999999776421 


Q ss_pred             ----------CCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          238 ----------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       238 ----------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                .....++++.++.++.++.......+|..+..++
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        209 FLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             HHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence                      1234678888888887776555555566655443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=3.3e-32  Score=234.37  Aligned_cols=187  Identities=19%  Similarity=0.190  Sum_probs=157.8

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLAS----KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~----~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++|||||++|||++++++|++    .|++|++++|+..+++...+++..... ..++.++++|+++.++++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS-GLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC-CceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999999988888777764221 223788999999999999999999888


Q ss_pred             cCCc----cEEEcCCcccccc-h-hhc-cchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCc
Q 023896           84 FGKL----DILTKGDAEVDWS-K-VCY-QTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        84 ~g~i----d~li~~ag~~~~~-~-~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.+    |+||||||..... . ..+ .+.+.|++.+++|+++++.+++.++|.|++++  .++||++||..+..+.  
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~--  158 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF--  158 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC--
Confidence            7653    6999999975321 1 222 24689999999999999999999999998653  4799999998776543  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++++++.++.++  ++|+||+|+||+|+
T Consensus       159 ----------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~  198 (256)
T TIGR01500       159 ----------------------------------------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLD  198 (256)
T ss_pred             ----------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Confidence                                                    667889999999999999999998  68999999999999


Q ss_pred             cCCcC
Q 023896          233 TDINF  237 (275)
Q Consensus       233 T~~~~  237 (275)
                      |++..
T Consensus       199 T~~~~  203 (256)
T TIGR01500       199 TDMQQ  203 (256)
T ss_pred             chHHH
Confidence            99853

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=238.81  Aligned_cols=182  Identities=25%  Similarity=0.286  Sum_probs=161.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++...    ..     .+.++.+|+++.++++++++++.+.+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~-----~~~~~~~Dl~d~~~~~~~~~~~~~~~   73 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE-----GLEAFQLDYAEPESIAALVAQVLELS   73 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC-----CceEEEccCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999999987655432    21     16778999999999999999987776


Q ss_pred             -CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           85 -GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        85 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                       +++|++|||||......+.+.+.+++++.+++|+.|++.+++.++|.|++++.++||++||..+..+.           
T Consensus        74 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------  142 (277)
T PRK05993         74 GGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM-----------  142 (277)
T ss_pred             CCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC-----------
Confidence             68999999999877766777889999999999999999999999999998888999999998776543           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                     ++...|++||+++++++++++.|+  .+|+|++|+||+|+|++..
T Consensus       143 -------------------------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~  187 (277)
T PRK05993        143 -------------------------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRA  187 (277)
T ss_pred             -------------------------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhh
Confidence                                           567899999999999999999998  6899999999999999753

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.2e-32  Score=234.86  Aligned_cols=222  Identities=23%  Similarity=0.251  Sum_probs=180.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|+.|++.+|+.++++...+.+.   .   .+.++.+|+++.++++++++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG---E---RVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---C---ceEEEEccCCCHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999877666554431   1   2778899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.        
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  146 (245)
T PRK12936         75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN--------  146 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC--------
Confidence            999999999999999876655666788899999999999999999999988876667899999998776553        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +....|+++|+++..+++.++.++  .++++++|+||+++|++...
T Consensus       147 ----------------------------------~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        147 ----------------------------------PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence                                              556789999999999999999998  58999999999999987533


Q ss_pred             CC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 AG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..               ...+++.++.++.++.......+|..+..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12936        193 LNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVN  239 (245)
T ss_pred             cChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEEC
Confidence            21               124556666655554433333445544433

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=8.3e-33  Score=235.31  Aligned_cols=221  Identities=20%  Similarity=0.228  Sum_probs=177.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +|||||++|||.+++++|+++|++|++++|. ....+...+++...+.   ++.++++|+++.+++.++++++.+.++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG---NARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC---eEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999998865 4455566666655433   28889999999999999999999999999


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHh-hhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      |++|||+|.....++.+.+.++|++++++|+.++++++++++ |.+++++.++||++||..+..+.              
T Consensus        78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------  143 (239)
T TIGR01831        78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN--------------  143 (239)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC--------------
Confidence            999999998766666677889999999999999999999875 55555566899999998877654              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCCCCh
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSV  244 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~~~~  244 (275)
                                                  ++...|+++|++++.+++.++.++  ++|+||+|+||+++|++.........
T Consensus       144 ----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  195 (239)
T TIGR01831       144 ----------------------------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLD  195 (239)
T ss_pred             ----------------------------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHH
Confidence                                        567789999999999999999998  68999999999999998753211111


Q ss_pred             hhhhccceeecccCCCCCcceEeccCcccC
Q 023896          245 EEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       245 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ......++.+...|++.+....|+.++.+.
T Consensus       196 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  225 (239)
T TIGR01831       196 EALKTVPMNRMGQPAEVASLAGFLMSDGAS  225 (239)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            122334555666667777777777766544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-32  Score=233.77  Aligned_cols=182  Identities=23%  Similarity=0.248  Sum_probs=151.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+.+++|++|||||++|||++++++|+++|++|++++| +.+..++..+++   .     ...+.+|+++.+++.++++ 
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~-----~~~~~~D~~~~~~~~~~~~-   71 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---G-----ATAVQTDSADRDAVIDVVR-   71 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---C-----CeEEecCCCCHHHHHHHHH-
Confidence            77889999999999999999999999999999998876 444444333322   1     4567899999998777764 


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                         .++++|++|||||.....+..+.+.++|++.+++|+.+++.+++.+.+.|.+  .++||++||..+...        
T Consensus        72 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~--------  138 (237)
T PRK12742         72 ---KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRM--------  138 (237)
T ss_pred             ---HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccC--------
Confidence               3578999999999866555567788999999999999999999999999853  479999999766321        


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       +.++...|+++|++++.+++.++.++  ++|+||+|+||+++|++..
T Consensus       139 ---------------------------------~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~  185 (237)
T PRK12742        139 ---------------------------------PVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP  185 (237)
T ss_pred             ---------------------------------CCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence                                             11567789999999999999999998  6899999999999999853

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.9e-32  Score=229.37  Aligned_cols=213  Identities=25%  Similarity=0.300  Sum_probs=183.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+++++++||||++|||++++++|+++|++|++++|+..+.+...+++...+   .++.++++|+++++++.++++++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG---VKVVIATADVSDYEEVTAAIEQL   78 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CeEEEEECCCCCHHHHHHHHHHH
Confidence            445788999999999999999999999999999999999988777777665432   23888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||+|......+.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.        
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------  150 (239)
T PRK07666         79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA--------  150 (239)
T ss_pred             HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC--------
Confidence            999999999999999866655667788999999999999999999999999987777899999998776553        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+.+|++++.+++.++.++  .+++++.|+||++.|++...
T Consensus       151 ----------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  196 (239)
T PRK07666        151 ----------------------------------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD  196 (239)
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh
Confidence                                              556789999999999999999998  58999999999999997432


Q ss_pred             C--------CCCChhhhhccceeecccC
Q 023896          239 A--------GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 ~--------~~~~~~~~a~~~~~~~~~~  258 (275)
                      .        ...++++.++.++.++..+
T Consensus       197 ~~~~~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        197 LGLTDGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             ccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            1        2467788888887766654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.1e-32  Score=230.82  Aligned_cols=224  Identities=24%  Similarity=0.239  Sum_probs=185.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++++++|||||+|+||.+++++|+++|++|++++|+..+.+.....+.. .   ..+.++.+|+++.+++.++++++.
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~~~   76 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-G---GRAIAVAADVSDEADVEAAVAAAL   76 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999877776666543 1   238889999999999999999998


Q ss_pred             hhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.        
T Consensus        77 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  148 (251)
T PRK07231         77 ERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR--------  148 (251)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC--------
Confidence            99999999999998743 334556788999999999999999999999999987777899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+.+|++++.+++.++.++  .++++++++||+++|++...
T Consensus       149 ----------------------------------~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  194 (251)
T PRK07231        149 ----------------------------------PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA  194 (251)
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence                                              567789999999999999999998  49999999999999987532


Q ss_pred             C-------------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A-------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .                   ...++++.++..+.++..+....+|.++..++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        195 FMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             hhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            1                   12356777777777665444455566655543

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-32  Score=232.60  Aligned_cols=189  Identities=26%  Similarity=0.325  Sum_probs=165.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |.+++|+++||||++|||++++++|+++|++|++++|+..+.+...+++...+.   ++..+.+|++++++++++++++.
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   77 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGR---RALAVPTDITDEDQCANLVALAL   77 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCC---ceEEEecCCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999887777766654432   27889999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.+.|.+.+ ++||++||..+..+.        
T Consensus        78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~--------  148 (258)
T PRK07890         78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQ--------  148 (258)
T ss_pred             HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCC--------
Confidence            999999999999987533 4555678899999999999999999999999987654 799999997765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|+++|++++.+++.++.++  .+|++|+|+||++.|++.
T Consensus       149 ----------------------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        149 ----------------------------------PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             ----------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence                                              567889999999999999999998  589999999999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=230.49  Aligned_cols=224  Identities=25%  Similarity=0.340  Sum_probs=188.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||+++||++++++|+++|++|++++|+..+.+...+++...+.   ++..+.+|+++++++.++++++.+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGG---KAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999888777777654332   3888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ++++|++|||+|........+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.           
T Consensus        79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------  147 (258)
T PRK12429         79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----------  147 (258)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------
Confidence            999999999999876666667788999999999999999999999999988878899999998776554           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC---
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH---  238 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~---  238 (275)
                                                     ++...|+++|++++.+++.++.++  ++|++++++||++.|++...   
T Consensus       148 -------------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~  196 (258)
T PRK12429        148 -------------------------------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIP  196 (258)
T ss_pred             -------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhh
Confidence                                           667899999999999999999998  68999999999999976421   


Q ss_pred             ------------------------CCCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          239 ------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       239 ------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                              ....++++.++..+.++.......+|..|..++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        197 DLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             hhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence                                    1134677777776666554444456666666543

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-32  Score=233.56  Aligned_cols=205  Identities=22%  Similarity=0.364  Sum_probs=178.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||+||||++++++|+++|++|++++|+.++++...+++...+..   +.++++|+++++++.++++++.+.+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD---GFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999998888887777654333   788999999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+||||+|......+.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.              
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------  143 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG--------------  143 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC--------------
Confidence            999999999877666777888999999999999999999999999988777899999998877554              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-----
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                                  ++...|+++|+++++++++++.++  .++++++|+||+++|++....     
T Consensus       144 ----------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  195 (270)
T PRK05650        144 ----------------------------PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP  195 (270)
T ss_pred             ----------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCch
Confidence                                        667899999999999999999998  589999999999999975421     


Q ss_pred             ------------CCCChhhhhccceeecc
Q 023896          240 ------------GILSVEEGAESPVKLAL  256 (275)
Q Consensus       240 ------------~~~~~~~~a~~~~~~~~  256 (275)
                                  ...++++.++.++..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~vA~~i~~~l~  224 (270)
T PRK05650        196 AMKAQVGKLLEKSPITAADIADYIYQQVA  224 (270)
T ss_pred             hHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence                        13566777776665554

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.5e-31  Score=228.72  Aligned_cols=210  Identities=25%  Similarity=0.341  Sum_probs=176.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |..+++|+++||||++|||++++++|+++|++|++..+ +....+...+++...+.   ++.++++|+++++++.+++++
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH---DVYAVQADVSKVEDANRLVEE   77 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHH
Confidence            67788999999999999999999999999999987654 55555555566654332   388899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++|||||........+.+.+.+++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.       
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  150 (247)
T PRK12935         78 AVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-------  150 (247)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-------
Confidence            9999999999999999876655667788999999999999999999999999987777899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+++|++++++++.++.++  .+++++.|+||+++|++..
T Consensus       151 -----------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  195 (247)
T PRK12935        151 -----------------------------------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA  195 (247)
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh
Confidence                                               566789999999999999999997  6899999999999998743


Q ss_pred             CC---------------CCCChhhhhccceeec
Q 023896          238 HA---------------GILSVEEGAESPVKLA  255 (275)
Q Consensus       238 ~~---------------~~~~~~~~a~~~~~~~  255 (275)
                      ..               ....+++.++.++.++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~  228 (247)
T PRK12935        196 EVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLC  228 (247)
T ss_pred             hccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHc
Confidence            21               1345666666665544

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.8e-32  Score=255.63  Aligned_cols=186  Identities=26%  Similarity=0.353  Sum_probs=164.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ..++|++|||||++|||++++++|+++|++|++++|+.++++...+++.   .   .+.++++|++++++++++++++.+
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~~~   75 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG---P---DHHALAMDVSDEAQIREGFEQLHR   75 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---ceeEEEeccCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999888776655542   1   267899999999999999999999


Q ss_pred             hcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCC-eEEEEecCccccCCCcHHHHh
Q 023896           83 QFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +++++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|.|.+++.| +||++||..+..+.       
T Consensus        76 ~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-------  148 (520)
T PRK06484         76 EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-------  148 (520)
T ss_pred             HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-------
Confidence            9999999999999742  2445577889999999999999999999999999766555 99999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         +....|+++|++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       149 -----------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~  192 (520)
T PRK06484        149 -----------------------------------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMV  192 (520)
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhh
Confidence                                               567899999999999999999998  589999999999999985

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=229.63  Aligned_cols=190  Identities=27%  Similarity=0.351  Sum_probs=166.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++....++......   +.++.+|+++++++.++++++.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA---AHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998887777666544332   78899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--------CCeEEEEecCccccCCCc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--------SPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~g~iv~vsS~~~~~~~~~  154 (275)
                      .++++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++.|.|.++.        .+++|++||..+..+.  
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--  160 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL--  160 (258)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC--
Confidence            999999999999986655555677889999999999999999999999987553        4799999998766443  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              +....|+++|++++.+++.++.++  ++++||+|+||+|+
T Consensus       161 ----------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~  200 (258)
T PRK06949        161 ----------------------------------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYID  200 (258)
T ss_pred             ----------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCc
Confidence                                                    556789999999999999999998  68999999999999


Q ss_pred             cCCcC
Q 023896          233 TDINF  237 (275)
Q Consensus       233 T~~~~  237 (275)
                      |++..
T Consensus       201 t~~~~  205 (258)
T PRK06949        201 TEINH  205 (258)
T ss_pred             CCcch
Confidence            99854

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=7e-32  Score=234.39  Aligned_cols=181  Identities=25%  Similarity=0.346  Sum_probs=161.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|+++||||+||||++++++|+++|++|++++|+.++++...    ..     .+.++++|+++.++++++++++.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL-----GVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC-----CCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            5799999999999999999999999999999999987654432    11     16788999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|++|||||.....++.+.+.++++..+++|+.+++.+++.++|.|++++.|+||++||..+..+.            
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------  140 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT------------  140 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC------------
Confidence            99999999999877777778889999999999999999999999999988877899999997765443            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    +....|+++|++++++++.++.++  .+|+|++|+||+++|++.
T Consensus       141 ------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        141 ------------------------------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             ------------------------------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence                                          556689999999999999999997  589999999999999974

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=231.51  Aligned_cols=210  Identities=20%  Similarity=0.247  Sum_probs=180.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++++++|||||++|||.+++++|+++|++|++++|+.++.+....++ ...   .++.++++|+++.+++.++++.+.
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~---~~~~~~~~D~~d~~~~~~~~~~~~   76 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYP---GRHRWVVADLTSEAGREAVLARAR   76 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcC---CceEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988877776666 222   238889999999999999999887


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      + ++++|++|||||.....+..+.+.+++++++++|+.|++.+++.+.++|.+.+.++||++||..+..+.         
T Consensus        77 ~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  146 (263)
T PRK09072         77 E-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---------  146 (263)
T ss_pred             h-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---------
Confidence            6 789999999999876666667788999999999999999999999999987777899999998776553         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+.+|+++.++++.++.++  .+++|++|+||+++|++....
T Consensus       147 ---------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~  193 (263)
T PRK09072        147 ---------------------------------PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA  193 (263)
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh
Confidence                                             567789999999999999999998  589999999999999874321


Q ss_pred             ----------CCCChhhhhccceeecccC
Q 023896          240 ----------GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       240 ----------~~~~~~~~a~~~~~~~~~~  258 (275)
                                ...++++.++.++.++...
T Consensus       194 ~~~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        194 VQALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             cccccccccCCCCCHHHHHHHHHHHHhCC
Confidence                      2357888888887777644

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-32  Score=234.58  Aligned_cols=184  Identities=21%  Similarity=0.255  Sum_probs=162.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|++|||||+||||++++++|+++|++|++++|+..+.+...+.    ..  .++..+.+|+++++++.++++++.+.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----HP--DRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----cC--CCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999998765544322    11  237788999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|++|||||.....+..+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.            
T Consensus        77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~------------  144 (277)
T PRK06180         77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM------------  144 (277)
T ss_pred             CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC------------
Confidence            99999999999876666667788999999999999999999999999988777899999998877553            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    ++...|+++|++++.+++.++.++  .+++|++|+||++.|++.
T Consensus       145 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  188 (277)
T PRK06180        145 ------------------------------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA  188 (277)
T ss_pred             ------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence                                          667899999999999999999997  589999999999999863

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=230.17  Aligned_cols=226  Identities=24%  Similarity=0.296  Sum_probs=186.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |..+++|+++||||++|||+.++++|+++|++ |++++|+........+++...+.   ++.++.+|+++++++.++++.
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGA---KAVFVQADLSDVEDCRRVVAA   77 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHH
Confidence            77889999999999999999999999999998 99999998777766666644322   277889999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.+.++++|++||++|........+.+.+.|++++++|+.+++.+++++++.|.+++ .+++|++||..+..+.      
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------  151 (260)
T PRK06198         78 ADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ------  151 (260)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC------
Confidence            999999999999999987665566778999999999999999999999999997653 4799999998765443      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|+++|+++++++++++.++  .+++|+.|+||++.|++.
T Consensus       152 ------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        152 ------------------------------------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             ------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence                                                556789999999999999999998  689999999999999863


Q ss_pred             CC----------------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          237 FH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       237 ~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ..                      ....++++.++..+.++.......+|..+..++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        196 DRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             hhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            11                      012467777777776665554456666655544

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=233.04  Aligned_cols=184  Identities=28%  Similarity=0.320  Sum_probs=163.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|++|||||+||||++++++|+++|++|++++|+.++++...+.+   .   ..+..+++|+++++++.++++++.+.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---G---DRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---c---CCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999988766554332   1   127788999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.            
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------  143 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF------------  143 (275)
T ss_pred             CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC------------
Confidence            99999999999877777777889999999999999999999999999988777899999998776553            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    +....|+++|++++.+++.++.++  .+++|+.|+||+++|++.
T Consensus       144 ------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        144 ------------------------------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             ------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence                                          567789999999999999999997  589999999999999986

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=233.70  Aligned_cols=222  Identities=26%  Similarity=0.263  Sum_probs=177.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +.+++|++|||||++|||.+++++|+++|++|++++|+.. ..+...+.+...+.   ++.++.+|+++.+++.++++++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV---KCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999864 34444444443322   3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||... ...+.+.+.++|.+.+++|+.+++.+++++.+.|++  .++||++||..+..+.       
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~-------  189 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGN-------  189 (290)
T ss_pred             HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCC-------
Confidence            999999999999998753 344567788999999999999999999999999853  4799999998876554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         +....|+++|++++.++++++.++  .+|+|++|+||+++|++..
T Consensus       190 -----------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~  234 (290)
T PRK06701        190 -----------------------------------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIP  234 (290)
T ss_pred             -----------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccc
Confidence                                               456789999999999999999998  5999999999999998753


Q ss_pred             CC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                ...++++.++..+.++.......+|..+..+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~id  283 (290)
T PRK06701        235 SDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVN  283 (290)
T ss_pred             cccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence            21                1234566666666555544444455554443

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-32  Score=230.96  Aligned_cols=222  Identities=28%  Similarity=0.341  Sum_probs=180.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.+++|+++||||++|||++++++|+++|++|+++.|+.. ..+...+++.....   ++.++++|+++.++++++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   77 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG---RAIAVQADVADAAAVTRLFDAA   77 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999998887554 44555555554332   3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++++++.|.+  .++||++||..+..+.        
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~--------  147 (245)
T PRK12937         78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPL--------  147 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCC--------
Confidence            999999999999999876666667788999999999999999999999999864  4799999997765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .+++++.|+||+++|++...
T Consensus       148 ----------------------------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  193 (245)
T PRK12937        148 ----------------------------------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN  193 (245)
T ss_pred             ----------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc
Confidence                                              567889999999999999999998  68999999999999998421


Q ss_pred             C----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .                ...++++.++..+.+...+....+|.++..+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  241 (245)
T PRK12937        194 GKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVN  241 (245)
T ss_pred             cCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeC
Confidence            1                1235666666666655544444556665554

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=233.70  Aligned_cols=187  Identities=26%  Similarity=0.383  Sum_probs=160.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+..+.+...+++.        ..++++|++++++++++++++.
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~   74 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------GLFVPTDVTDEDAVNALFDTAA   74 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------CcEEEeeCCCHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999876655544431        2467899999999999999999


Q ss_pred             hhcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++++|++|||||....  .++.+.+.+.+++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.       
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-------  147 (255)
T PRK06057         75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-------  147 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-------
Confidence            999999999999987542  23445678899999999999999999999999987777899999997765432       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        .++...|+++|++++.+++.++.++  .+++|++|+||+++|++..
T Consensus       148 ----------------------------------~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  193 (255)
T PRK06057        148 ----------------------------------ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQ  193 (255)
T ss_pred             ----------------------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhh
Confidence                                              1245679999999999999999998  5899999999999999754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=231.42  Aligned_cols=207  Identities=28%  Similarity=0.324  Sum_probs=175.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+++...+..  ....+++|++++++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT--VPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999998877777777654332  1556789999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|++|||+|...+.+..+.+.++++..+++|+.+++.++++++|.|.+. +.++||++||..+..+.             
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-------------  145 (272)
T PRK07832         79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-------------  145 (272)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-------------
Confidence            9999999998766667788999999999999999999999999999754 35899999998765443             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                                   ++...|+++|++++++++.++.++  .+|+|+.|+||+++|++....    
T Consensus       146 -----------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~  196 (272)
T PRK07832        146 -----------------------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAG  196 (272)
T ss_pred             -----------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccc
Confidence                                         567789999999999999999997  689999999999999875321    


Q ss_pred             -----------------CCCChhhhhccceeeccc
Q 023896          240 -----------------GILSVEEGAESPVKLALL  257 (275)
Q Consensus       240 -----------------~~~~~~~~a~~~~~~~~~  257 (275)
                                       ...++++.|+.++.++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        197 VDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhc
Confidence                             135777777777766643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=233.61  Aligned_cols=188  Identities=18%  Similarity=0.188  Sum_probs=164.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||+++||.+++++|+++|++|++++|+..+.+...+++...... .++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGE-GMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-ceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999999999988777776666543321 2388899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.|++++ .++||++||..+..+.            
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------  148 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------  148 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------
Confidence            999999999987766667788999999999999999999999999998765 6899999998766543            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee-ecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV-KTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v-~T~~~  236 (275)
                                                    +....|+++|++++.+++.++.++  .+|+||+|+||++ .|++.
T Consensus       149 ------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~  193 (259)
T PRK12384        149 ------------------------------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF  193 (259)
T ss_pred             ------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh
Confidence                                          456789999999999999999997  6899999999975 66653

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-31  Score=228.05  Aligned_cols=223  Identities=22%  Similarity=0.223  Sum_probs=178.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |++..+|++|||||++|||++++++|+++|++|+++++ +....+...+++...+.   ++.++++|+++.+++.+++++
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGR---RAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHH
Confidence            45567899999999999999999999999999988776 44555566666654432   378899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.+.+.+...++||+++|..+..+.       
T Consensus        81 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~-------  153 (258)
T PRK09134         81 ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN-------  153 (258)
T ss_pred             HHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC-------
Confidence            9999999999999999876666667788999999999999999999999999987767899999986543322       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                         +....|+++|++++.+++.++.++ ++++||+|+||++.|+....
T Consensus       154 -----------------------------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~  198 (258)
T PRK09134        154 -----------------------------------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS  198 (258)
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC
Confidence                                               455689999999999999999998 56999999999998854211


Q ss_pred             C-------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A-------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~-------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .             ...++++.++..+.++..+.  .+|..+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~--~~g~~~~i~  241 (258)
T PRK09134        199 PEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPS--VTGQMIAVD  241 (258)
T ss_pred             hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCC--cCCCEEEEC
Confidence            0             12467777777776665332  345444443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.4e-31  Score=227.53  Aligned_cols=188  Identities=23%  Similarity=0.318  Sum_probs=167.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||+++||++++++|+++|++|++++|+..+.....+++.....   ++.++++|+++.++++++++++.+.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG---NAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999887777666654432   3888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.+.|++.+.++||++||..+..+.           
T Consensus        78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~-----------  146 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS-----------  146 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC-----------
Confidence            999999999999866666667788999999999999999999999999987777899999998776543           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                     +....|+.+|++++.+++.++.++  .+++++.++||+++|++.
T Consensus       147 -------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~  190 (250)
T TIGR03206       147 -------------------------------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL  190 (250)
T ss_pred             -------------------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhH
Confidence                                           567789999999999999999998  589999999999999864

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-32  Score=232.73  Aligned_cols=193  Identities=26%  Similarity=0.344  Sum_probs=165.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||.+++++|+++|++|++++|+..+.+...+.+...+.   ++.++++|++++++++++++++.+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~---~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGI---DALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777666654432   277899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhh-hhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++.+. |.+++.+++|++||..+..+..        
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~--------  157 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNP--------  157 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC--------
Confidence            9999999999999765555566788999999999999999999999998 7766668999999977664430        


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    ...++...|+++|++++.+++.++.++  .++++|.|+||+++|++.
T Consensus       158 ------------------------------~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~  204 (259)
T PRK08213        158 ------------------------------PEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT  204 (259)
T ss_pred             ------------------------------ccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch
Confidence                                          011235789999999999999999998  589999999999999874

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=8.1e-33  Score=224.72  Aligned_cols=213  Identities=28%  Similarity=0.361  Sum_probs=177.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++||.+++||+.||||++++++|+.+|..+.++..+.+..+.. .+|++.. ....+.+++||+++..++++.++++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~-p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAIN-PSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccC-CCceEEEEEeccccHHHHHHHHHHHH
Confidence            467899999999999999999999999999988888777765444 3444432 33459999999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHH
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .+||.||++||+||+..        .++|++++.+|+.|..+-....+|+|.++.   +|-|||+||..|..|.      
T Consensus        79 ~~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~------  144 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM------  144 (261)
T ss_pred             HHhCceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc------
Confidence            99999999999999864        567999999999999999999999998765   4789999999998765      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~  234 (275)
                                                          +-...|++||+++..|+|++|...    .||++|.||||++.|+
T Consensus       145 ------------------------------------p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~  188 (261)
T KOG4169|consen  145 ------------------------------------PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD  188 (261)
T ss_pred             ------------------------------------ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH
Confidence                                                667899999999999999999885    5999999999999998


Q ss_pred             CcCCC--------------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          235 INFHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       235 ~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      +....                    +-.++...++.++..+..+.   +|..|..
T Consensus       189 l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~---NGaiw~v  240 (261)
T KOG4169|consen  189 LAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK---NGAIWKV  240 (261)
T ss_pred             HHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc---CCcEEEE
Confidence            75322                    23467777777777666543   4444443

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-31  Score=227.05  Aligned_cols=209  Identities=23%  Similarity=0.284  Sum_probs=179.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++.+|+..+.+...+++..... ..++.++++|+++++++.++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999999887777666654321 22388899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++|||||+.......+.+.+.+++.+++|+.+++.+++.+.|.|.+.+.++||++||..+..+.             
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  147 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL-------------  147 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC-------------
Confidence            9999999999876666666778889999999999999999999999987777899999998776543             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCC-CCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC---
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA---  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~---  239 (275)
                                                   + ....|+.||++++.+++.++.++  .++++++|+||+++|++....   
T Consensus       148 -----------------------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~  198 (248)
T PRK08251        148 -----------------------------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST  198 (248)
T ss_pred             -----------------------------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC
Confidence                                         3 35789999999999999999998  589999999999999986532   


Q ss_pred             -CCCChhhhhccceeeccc
Q 023896          240 -GILSVEEGAESPVKLALL  257 (275)
Q Consensus       240 -~~~~~~~~a~~~~~~~~~  257 (275)
                       ..+++++.++.+++.+..
T Consensus       199 ~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        199 PFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             CccCCHHHHHHHHHHHHhc
Confidence             246788888888776654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.3e-31  Score=228.07  Aligned_cols=181  Identities=22%  Similarity=0.258  Sum_probs=160.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||+++||++++++|+++|++|++++|+.         +....   .++..+++|+++++++.++++++.
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   71 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQED---YPFATFVLDVSDAAAVAQVCQRLL   71 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcC---CceEEEEecCCCHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999986         11111   237889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||+|.....+..+.+.+++++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.         
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------  142 (252)
T PRK08220         72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR---------  142 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC---------
Confidence            99999999999999877666667788999999999999999999999999987777899999997665443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++.
T Consensus       143 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~  186 (252)
T PRK08220        143 ---------------------------------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ  186 (252)
T ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence                                             556889999999999999999998  689999999999999874

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=230.74  Aligned_cols=187  Identities=26%  Similarity=0.273  Sum_probs=154.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh----hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      +++++|++|||||++|||++++++|+++|++|++++++.    ...+...+++...+.   ++.++++|+++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA---KAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCC---cEEEEecCcCCHHHHHHHH
Confidence            346789999999999999999999999999977765432    334444455543322   3788999999999999999


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEE-ecCccccCCCcHH
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL-SSYVSALKDLPEK  156 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v-sS~~~~~~~~~~~  156 (275)
                      +++.+.++++|++|||||.....+..+.+.++|++.+++|+.+++.+++++.|.|++  .++++++ ||..+.. .    
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~-~----  153 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAF-T----  153 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhccc-C----
Confidence            999999999999999999866666667788999999999999999999999999864  3677776 4543321 1    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            +....|++||++++.++++++.++  .+|+||+|+||++.|+
T Consensus       154 --------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~  195 (257)
T PRK12744        154 --------------------------------------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP  195 (257)
T ss_pred             --------------------------------------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence                                                  456789999999999999999998  4899999999999998


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      +.
T Consensus       196 ~~  197 (257)
T PRK12744        196 FF  197 (257)
T ss_pred             hh
Confidence            75

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=6.7e-31  Score=224.82  Aligned_cols=224  Identities=27%  Similarity=0.300  Sum_probs=186.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc--ChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~   80 (275)
                      .+++|+++||||+++||.+++++|+++|++|++++|+..+.+...+++......  ++.++.+|++  +++++.++++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP--QPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEecccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998887777777654432  2666777775  788999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|++|||||.... .++.+.+.+.|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.       
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------  159 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-------  159 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-------
Confidence            9999999999999987533 34556788999999999999999999999999988888899999998766543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+++|++++.+++.++.++  +++++++++||+++|++..
T Consensus       160 -----------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        160 -----------------------------------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA  204 (247)
T ss_pred             -----------------------------------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh
Confidence                                               566789999999999999999998  6899999999999998642


Q ss_pred             C-------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 H-------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .       ....++++.++..+++........+|+.+...
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        205 SAFPGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             hhcCcccccCCCCHHHHHHHHHHHhCccccccCCeEEeCC
Confidence            1       12467788888888876555556677776554

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.98  E-value=7.2e-31  Score=224.59  Aligned_cols=221  Identities=25%  Similarity=0.263  Sum_probs=178.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||||++|||.++++.|+++|++|+++. |+.++.+....++.....   ++..+++|+++.++++++++++.+.+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG---RACVVAGDVANEADVIAMFDAVQSAF   78 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC---cEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999998765 666666666666654432   38899999999999999999999999


Q ss_pred             CCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHHhh
Q 023896           85 GKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        85 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|||||.... ..+.+.+.+++++.+++|+.+++.+++.+++.+..++   .++||++||..+..+.        
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------  150 (248)
T PRK06947         79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS--------  150 (248)
T ss_pred             CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC--------
Confidence            999999999997543 3455778899999999999999999999999886543   4689999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                       +.....|+++|+++++++++++.++  .+++|+.|+||+++|++...
T Consensus       151 ---------------------------------~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  197 (248)
T PRK06947        151 ---------------------------------PNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS  197 (248)
T ss_pred             ---------------------------------CCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc
Confidence                                             0224579999999999999999998  58999999999999997532


Q ss_pred             C----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .                ...++++.++..++++..+....+|.++..+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~  245 (248)
T PRK06947        198 GGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVG  245 (248)
T ss_pred             cCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence            1                1246677777777766655556677776654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.98  E-value=1.3e-31  Score=229.39  Aligned_cols=186  Identities=22%  Similarity=0.292  Sum_probs=162.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++...... ..+..+++|+++.++++++++++.+.++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-GVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-ceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            8999999999999999999999999999998 66666666666543221 125568899999999999999999999999


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++|||||......+.+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.               
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~---------------  145 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE---------------  145 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC---------------
Confidence            99999999877666777888999999999999999999999999998777899999998876543               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                 ++...|+++|++++.++++++.++    .+++|+.|+||+++|++..
T Consensus       146 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~  192 (251)
T PRK07069        146 ---------------------------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD  192 (251)
T ss_pred             ---------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence                                       567789999999999999999997    3599999999999999853

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.7e-31  Score=227.70  Aligned_cols=224  Identities=19%  Similarity=0.210  Sum_probs=181.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||+||||++++++|+++|++|++++|+..+.+...+++..... ..++.++++|+++++++.++++++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998877776666654322 12378889999999999999999999


Q ss_pred             hcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|++|||+|... ..++.+.+.+++.+++++|+.+++.+++++.+.|.+++.++|+++||..+..+.         
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  153 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------  153 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------
Confidence            9999999999998643 234556788899999999999999999999999987777899999997765443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  ++++++.|+||+++|++....
T Consensus       154 ---------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~  200 (276)
T PRK05875        154 ---------------------------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI  200 (276)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc
Confidence                                             556889999999999999999998  589999999999999875321


Q ss_pred             C-----------------CCChhhhhccceeecccCCCCCcceEecc
Q 023896          240 G-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       240 ~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      .                 ..++++.++..+.++..+.....|+.+..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~  247 (276)
T PRK05875        201 TESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINV  247 (276)
T ss_pred             ccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEE
Confidence            1                 12456666666666655444334444443

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=221.66  Aligned_cols=222  Identities=28%  Similarity=0.307  Sum_probs=187.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||.+.+++++||||+|+||++++++|+++|++|++++|++.+.....+++...    .++.++++|+++.+++.++++++
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~   76 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEADVQRAVDAI   76 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999999998877776766543    23888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++||++|.....++.+.+.+++++.+++|+.+++.+++++++.+. ++.++||++||..+..+.        
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~--------  147 (237)
T PRK07326         77 VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFF--------  147 (237)
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCC--------
Confidence            99999999999999987666666788999999999999999999999999984 345899999997765432        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +....|+++|++++++++.++.++  .++++++|+||++.|++...
T Consensus       148 ----------------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~  193 (237)
T PRK07326        148 ----------------------------------AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH  193 (237)
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc
Confidence                                              456789999999999999999887  69999999999999987543


Q ss_pred             CC------CCChhhhhccceeecccCCCCCcceEecc
Q 023896          239 AG------ILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       239 ~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ..      ..++++.++.++.++..+.......+.+.
T Consensus       194 ~~~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~  230 (237)
T PRK07326        194 TPSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR  230 (237)
T ss_pred             ccchhhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence            21      26788888888888777765555544443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=9.5e-31  Score=223.21  Aligned_cols=225  Identities=28%  Similarity=0.312  Sum_probs=191.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||+++||.+++++|+++|++|+++ +|+..+.+...+.+...+   .++.++.+|+++.+++.++++++
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG---GDAIAVKADVSSEEDVENLVEQI   77 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHH
Confidence            45778999999999999999999999999999999 999887777766665432   23888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++||++|.....++.+.+.+.+++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.        
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~--------  149 (247)
T PRK05565         78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA--------  149 (247)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC--------
Confidence            999999999999999876666667789999999999999999999999999987777899999997766543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +....|+.+|++++.+++.++.++  .++++++|+||+++|++...
T Consensus       150 ----------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~  195 (247)
T PRK05565        150 ----------------------------------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS  195 (247)
T ss_pred             ----------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence                                              556789999999999999999997  69999999999999987542


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .               ...++++.++..+.++.......+|+++..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        196 FSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence            2               12467777777777777667778888877664

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.2e-31  Score=226.70  Aligned_cols=203  Identities=22%  Similarity=0.197  Sum_probs=174.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh-cC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ-FG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   85 (275)
                      |++|||||++|||++++++|+++|++|++++|+....+...+.+.  +   .++.++++|+++.+++.++++++.+. ++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--A---GNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--C---CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987777655543  1   23888999999999999999988776 78


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+||||||......+.+.+.+++++.+++|+.+++.+++++.+.|+.++.++||++||..+..+.             
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  143 (260)
T PRK08267         77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ-------------  143 (260)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC-------------
Confidence            9999999999877666667788999999999999999999999999988778999999998777654             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-----  238 (275)
                                                   +....|+.||++++.+++.++.++  .+|++++|+||+++|++...     
T Consensus       144 -----------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~  194 (260)
T PRK08267        144 -----------------------------PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV  194 (260)
T ss_pred             -----------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh
Confidence                                         567789999999999999999997  58999999999999987643     


Q ss_pred             --------CCCCChhhhhccceeecc
Q 023896          239 --------AGILSVEEGAESPVKLAL  256 (275)
Q Consensus       239 --------~~~~~~~~~a~~~~~~~~  256 (275)
                              ....++++.++.++.++.
T Consensus       195 ~~~~~~~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        195 DAGSTKRLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             hhhhHhhccCCCCHHHHHHHHHHHHh
Confidence                    013567777777776664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.98  E-value=5.9e-31  Score=227.93  Aligned_cols=221  Identities=21%  Similarity=0.170  Sum_probs=169.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHH----HHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASV----SSLADFIK   81 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v----~~~~~~~~   81 (275)
                      ++++||||++|||++++++|+++|++|++++| +.++++...+++......  +...+.+|+++++++    +++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN--SAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC--ceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            68999999999999999999999999999875 455666666666433222  266789999999865    55666666


Q ss_pred             hhcCCccEEEcCCcccccchhhccch-----------hHHHHhHHhhcccHHHHHHHHhhhhhcC------CCCeEEEEe
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTY-----------ELAVECLKTNYYGTKQTCEALIPLLELS------DSPRLVNLS  144 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~iv~vs  144 (275)
                      +.++++|+||||||.....++.+.+.           ++|.+++++|+.+++.+++++.|.|...      ..++|++++
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            78899999999999755443332222           3588999999999999999999998543      236899999


Q ss_pred             cCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeE
Q 023896          145 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC  222 (275)
Q Consensus       145 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~  222 (275)
                      |..+..+.                                          ++...|++||+++++++++++.|+  .+|+
T Consensus       160 s~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  197 (267)
T TIGR02685       160 DAMTDQPL------------------------------------------LGFTMYTMAKHALEGLTRSAALELAPLQIR  197 (267)
T ss_pred             hhhccCCC------------------------------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeE
Confidence            97765443                                          567789999999999999999998  6899


Q ss_pred             EEeecCCeeecCCc--CC----------C--CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          223 VNCVCPGFVKTDIN--FH----------A--GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       223 vn~v~pG~v~T~~~--~~----------~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ||+|+||++.|+..  ..          .  ...+|++.++.+++++..+....+|.++..++
T Consensus       198 v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       198 VNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDG  260 (267)
T ss_pred             EEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECC
Confidence            99999999876522  10          0  13477788877777776555556666665543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3e-31  Score=229.86  Aligned_cols=180  Identities=27%  Similarity=0.364  Sum_probs=161.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++++++||||+||||++++++|+++|++|++.+|+..+.+..           ..+.++++|++|+++++++++++.+.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-----------PGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-----------CCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999987543211           127789999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+||||||.....+..+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.            
T Consensus        72 g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  139 (270)
T PRK06179         72 GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------  139 (270)
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------
Confidence            99999999999877777777889999999999999999999999999998888999999998876554            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                    +....|+++|++++.+++.++.++  .++++++|+||+++|++..
T Consensus       140 ------------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        140 ------------------------------PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             ------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence                                          667899999999999999999997  6999999999999999754

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.4e-31  Score=221.33  Aligned_cols=203  Identities=17%  Similarity=0.077  Sum_probs=162.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +++||||++|||++++++|+++|++|++++|+.++++...+++.        ..++++|++++++++++++++.+   ++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~v~~~~~~~~~---~i   70 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD--------VDAIVCDNTDPASLEEARGLFPH---HL   70 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--------CcEEecCCCCHHHHHHHHHHHhh---cC
Confidence            58999999999999999999999999999999887766655431        55788999999999998887643   69


Q ss_pred             cEEEcCCccccc------chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           88 DILTKGDAEVDW------SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        88 d~li~~ag~~~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      |++|||+|....      .++.+ +.++|++.+++|+.++++++++++|.|++  .|+||++||...             
T Consensus        71 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~-------------  134 (223)
T PRK05884         71 DTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP-------------  134 (223)
T ss_pred             cEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC-------------
Confidence            999999985321      12222 56899999999999999999999999964  489999999541             


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       +....|+++|+|+++|++.++.++  ++||||+|+||+++|++....
T Consensus       135 ---------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~  181 (223)
T PRK05884        135 ---------------------------------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL  181 (223)
T ss_pred             ---------------------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc
Confidence                                             345689999999999999999998  689999999999999974321


Q ss_pred             ---CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                         +...+++.++.++.+........+|..+..+
T Consensus       182 ~~~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vd  215 (223)
T PRK05884        182 SRTPPPVAAEIARLALFLTTPAARHITGQTLHVS  215 (223)
T ss_pred             cCCCCCCHHHHHHHHHHHcCchhhccCCcEEEeC
Confidence               2236778888777776655555666665544

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=221.85  Aligned_cols=226  Identities=23%  Similarity=0.258  Sum_probs=184.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec----ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR----DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      |..+++++++||||++|||++++++|+++|++|++++|    +....+...+++...+.   ++.++.+|+++.++++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~   77 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG---KALGLAFDVRDFAATRAA   77 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHH
Confidence            66778899999999999999999999999999999765    34444444445544332   388899999999999999


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHh-hhhhcCCCCeEEEEecCccccCCCcH
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      ++++.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++. +.+.+++.+++|++||..+..+.   
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  154 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---  154 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---
Confidence            99999988999999999998776666677889999999999999999999999 66666666899999998776543   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|+.+|++++.+++.++.++  .+++++.|+||+++|
T Consensus       155 ---------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t  195 (249)
T PRK12827        155 ---------------------------------------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINT  195 (249)
T ss_pred             ---------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCC
Confidence                                                   556789999999999999999997  589999999999999


Q ss_pred             CCcCCC------------C-CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          234 DINFHA------------G-ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       234 ~~~~~~------------~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ++....            . ..++++.++..+.++.......+|.++..++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        196 PMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG  246 (249)
T ss_pred             CcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            975321            1 2377777777776665555566677766543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=222.96  Aligned_cols=190  Identities=28%  Similarity=0.391  Sum_probs=163.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.++++++++||||+||||++++++|+++|++|++. .|+..+.+...+.+...+.   ++.++++|+++.+++.+++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGG---KAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---cEEEEEcCcCCHHHHHHHHHH
Confidence            778889999999999999999999999999998775 7887776666666643322   277899999999999999999


Q ss_pred             HHhhc------CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           80 IKTQF------GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        80 ~~~~~------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      +.+++      +++|++|||||......+.+.+.+.|++.+++|+.+++++++.+.+.|.+  .+++|++||..+..+. 
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~-  154 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGF-  154 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCC-
Confidence            98887      47999999999866655667788999999999999999999999999864  3699999997665443 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               ++...|+++|++++.++++++.++  .+++|++++||++
T Consensus       155 -----------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~  193 (254)
T PRK12746        155 -----------------------------------------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT  193 (254)
T ss_pred             -----------------------------------------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc
Confidence                                                     667889999999999999999997  5899999999999


Q ss_pred             ecCCcC
Q 023896          232 KTDINF  237 (275)
Q Consensus       232 ~T~~~~  237 (275)
                      +|++..
T Consensus       194 ~t~~~~  199 (254)
T PRK12746        194 KTDINA  199 (254)
T ss_pred             cCcchh
Confidence            998753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2e-30  Score=222.05  Aligned_cols=209  Identities=27%  Similarity=0.295  Sum_probs=174.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ||+++++++|||||+++||++++++|+++|++|++..|+ .+........+...+..   +..+.+|+++++++.+++++
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~   77 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE---GIGVLADVSTREGCETLAKA   77 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe---eEEEEeccCCHHHHHHHHHH
Confidence            788899999999999999999999999999999887754 34444444455444322   77889999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++++.+.|++  .+++|++||..+..+.       
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~-------  148 (252)
T PRK06077         78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPA-------  148 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCC-------
Confidence            9999999999999999866666666778889999999999999999999999865  3799999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                         ++...|+++|++++.+++.++.++ ++++++.|.||+++|++...
T Consensus       149 -----------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~  193 (252)
T PRK06077        149 -----------------------------------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES  193 (252)
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh
Confidence                                               667899999999999999999998 68999999999999986421


Q ss_pred             C-------------------CCCChhhhhccceeecc
Q 023896          239 A-------------------GILSVEEGAESPVKLAL  256 (275)
Q Consensus       239 ~-------------------~~~~~~~~a~~~~~~~~  256 (275)
                      .                   ...++++.++..+.++.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  230 (252)
T PRK06077        194 LFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK  230 (252)
T ss_pred             hhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC
Confidence            0                   12677888877776664

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=226.60  Aligned_cols=179  Identities=27%  Similarity=0.317  Sum_probs=158.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||++|||++++++|+++|++|++++|+.++.+...    ..+     +..+.+|+++.++++++++++.+.+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~~-----~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AAG-----FTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HCC-----CeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999987654432    211     567899999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|++|||||.....+..+.+.+++++.+++|+.+++.++++++|.|++. .++||++||..+..+.              
T Consensus        73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~--------------  137 (274)
T PRK05693         73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT--------------  137 (274)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC--------------
Confidence            9999999998766666678899999999999999999999999999754 4899999998876554              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                  +....|+++|++++.++++++.++  .+|+|++|+||+|+|++..
T Consensus       138 ----------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        138 ----------------------------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             ----------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence                                        567789999999999999999997  5899999999999999764

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-30  Score=225.51  Aligned_cols=188  Identities=24%  Similarity=0.353  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|++|||||+||||++++++|+++|++|++++|+....+...+++...... .++.++.+|+++.+++++ ++++.+.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ-QNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            5789999999999999999999999999999999988777766655543221 238889999999999999 88898899


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|++|||+|........+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.            
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------  147 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------  147 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------
Confidence            99999999999876665667788999999999999999999999999988777899999998776543            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    ++...|+++|++++.++++++.++  .+|++++++||+++|++.
T Consensus       148 ------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (280)
T PRK06914        148 ------------------------------PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIW  191 (280)
T ss_pred             ------------------------------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchh
Confidence                                          567789999999999999999887  589999999999999964

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=3.4e-30  Score=220.31  Aligned_cols=226  Identities=25%  Similarity=0.248  Sum_probs=186.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||+|+||.+++++|+++|++|++++|+..+.....+++...+..   +.++.+|+++.++++++++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK---ARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEECCCCCHHHHHHHHHHH
Confidence            56778999999999999999999999999999999999988777776766544332   788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  159 (275)
                      .+.++++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.+++|++||..+. .+.       
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-------  150 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY-------  150 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC-------
Confidence            999999999999998877666667788999999999999999999999999987777899999997665 322       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+.+|++++.+++.++.++  .+++++.++||++.|+...
T Consensus       151 -----------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (251)
T PRK12826        151 -----------------------------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAG  195 (251)
T ss_pred             -----------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhh
Confidence                                               556789999999999999999987  6899999999999998642


Q ss_pred             CC----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          238 HA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       238 ~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ..                ...++++.++.++.++..+....+|..+..++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  245 (251)
T PRK12826        196 NLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDG  245 (251)
T ss_pred             hcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            21                12466777777666554444334566665544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-30  Score=219.81  Aligned_cols=186  Identities=26%  Similarity=0.341  Sum_probs=156.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++|||||++|||++++++|+++|++|+++. |+....+...+.+...+.   ++.++++|+++.+++.++++++.+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGG---EALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCC---cEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999998887 455555555555554332   27789999999999999999999999


Q ss_pred             CCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHHhh
Q 023896           85 GKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        85 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|||||.... .+..+.+.++|++.+++|+.+++.+++++++.|.++.   .|+||++||..+..+.        
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  150 (248)
T PRK06123         79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS--------  150 (248)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC--------
Confidence            999999999997543 3455678899999999999999999999999987542   4789999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC-CchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++ ...|+++|++++.+++.++.++  ++|+|++|+||++.|++.
T Consensus       151 ----------------------------------~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~  195 (248)
T PRK06123        151 ----------------------------------PGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH  195 (248)
T ss_pred             ----------------------------------CCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence                                              22 3569999999999999999998  589999999999999874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=3.3e-30  Score=219.74  Aligned_cols=187  Identities=23%  Similarity=0.292  Sum_probs=160.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||||++|||.+++++|+++|++|++++|+... .......+...   ..++.++++|+++.+++.++++++.+++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT---EDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc---CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999998642 22222222221   2348889999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|++.+.++||++||..+..+.            
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------  146 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ------------  146 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC------------
Confidence            99999999999876666667889999999999999999999999999987777899999997766443            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                    ++...|+++|++++++++.++.++  .+++++.++||++.|++..
T Consensus       147 ------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  191 (245)
T PRK12824        147 ------------------------------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE  191 (245)
T ss_pred             ------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchh
Confidence                                          567789999999999999999987  5899999999999998764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-30  Score=251.83  Aligned_cols=209  Identities=25%  Similarity=0.298  Sum_probs=180.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++++|+++.++++++++++.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG---TAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888888777765433   388899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhcc--chhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQ--TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+|++|++|||||......+...  ..+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.        
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  516 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA--------  516 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC--------
Confidence            99999999999997544333222  25789999999999999999999999988888999999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+++++++++++.|+  .+|+||+|+||+|+|++...
T Consensus       517 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        517 ----------------------------------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             ----------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence                                              567889999999999999999998  68999999999999998653


Q ss_pred             C------CCCChhhhhccceeecc
Q 023896          239 A------GILSVEEGAESPVKLAL  256 (275)
Q Consensus       239 ~------~~~~~~~~a~~~~~~~~  256 (275)
                      .      ..++|++.++.++..+.
T Consensus       563 ~~~~~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        563 TKRYNNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             cccccCCCCCCHHHHHHHHHHHHH
Confidence            2      24688888888777554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=5.8e-30  Score=217.84  Aligned_cols=186  Identities=23%  Similarity=0.308  Sum_probs=162.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      |++|||||++|||++++++|+++|++|+++.| +....+...+++.....   ++.++.+|+++++++.++++++.+.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGF---DFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCC---ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999988 66555555554443322   388899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++|||+|......+.+.+.+++++.+++|+.+++.+++++++.|++++.++||++||..+..+.             
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------  144 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-------------  144 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-------------
Confidence            9999999999876656667788999999999999999999999999988777899999998766543             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                   ++...|+++|++++.+++.++.++  .+++++.++||++.|++..
T Consensus       145 -----------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  189 (242)
T TIGR01829       145 -----------------------------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM  189 (242)
T ss_pred             -----------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence                                         557789999999999999999998  5899999999999998754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.5e-30  Score=220.88  Aligned_cols=176  Identities=26%  Similarity=0.312  Sum_probs=149.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|+++||||++|||.+++++|+++|++|++++|+....         .   ..++..+++|++++      ++++.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~---~~~~~~~~~D~~~~------~~~~~   62 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------L---SGNFHFLQLDLSDD------LEPLF   62 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------c---CCcEEEEECChHHH------HHHHH
Confidence            457899999999999999999999999999999999986421         0   11377889999987      44455


Q ss_pred             hhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|++|||||... ..+..+.+.+++++.+++|+.++++++++++|.|.+++.++||++||..+..+.        
T Consensus        63 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  134 (235)
T PRK06550         63 DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG--------  134 (235)
T ss_pred             HhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC--------
Confidence            56689999999999753 244556788999999999999999999999999987777899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.++  ++|+||+|+||+++|++..
T Consensus       135 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        135 ----------------------------------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             ----------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence                                              567789999999999999999998  5899999999999999753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6e-30  Score=217.07  Aligned_cols=224  Identities=23%  Similarity=0.239  Sum_probs=184.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+.+++|++|||||+|+||++++++|+++|++|++++|+..+..+..+++....     ...+.+|+++.+++.++++++
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~   76 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA-----LRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC-----ceEEEeecCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999887666665554322     566789999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+++|++|...+......+.+++++.+++|+.+++.+++++.+.+++++.+++|++||..+..+.        
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  148 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG--------  148 (239)
T ss_pred             HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC--------
Confidence            999999999999999876666666788999999999999999999999999987777899999997765433        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .+++++.+.||++.|++...
T Consensus       149 ----------------------------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~  194 (239)
T PRK12828        149 ----------------------------------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA  194 (239)
T ss_pred             ----------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence                                              556789999999999999999987  58999999999999986432


Q ss_pred             C-------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A-------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .       ...++++.++..+.++.......+|..+..++
T Consensus       195 ~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        195 DMPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             cCCchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            1       12457888887776665443344565555443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=5.9e-30  Score=219.26  Aligned_cols=205  Identities=20%  Similarity=0.250  Sum_probs=169.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++++||||+||||.+++++|+++|++|++++|+..+++...+.+.   .   .+.++.+|+++.+++.++++++.+.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---D---NLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---c---ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            469999999999999999999999999999999887666554432   1   2778899999999999999999999999


Q ss_pred             ccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|++|||+|... ..+..+.+.++|++++++|+.+++.+++.+.|.|.+.+.++||++||..+..+.             
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  141 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-------------  141 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCC-------------
Confidence            999999999743 234556788999999999999999999999999987777899999997765433             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-----  238 (275)
                                                   ++...|+.+|++++++++.++.++  .+|++|+|+||++.|++...     
T Consensus       142 -----------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~  192 (248)
T PRK10538        142 -----------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG  192 (248)
T ss_pred             -----------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC
Confidence                                         566789999999999999999998  68999999999997443211     


Q ss_pred             -----------CCCCChhhhhccceeecccCC
Q 023896          239 -----------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 -----------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                                 ....++++.++.++.++..+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        193 DDGKAEKTYQNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             cHHHHHhhccccCCCCHHHHHHHHHHHhcCCC
Confidence                       123567777777776665444

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.7e-30  Score=218.58  Aligned_cols=206  Identities=25%  Similarity=0.272  Sum_probs=174.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||++|||.+++++|+++|++|++++|+.++.+...+++.....  .++.++++|++++++++++++++.+   +
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA--VAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            6899999999999999999999999999999999887777666654322  2388999999999999999987754   4


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|++|||+|........+.+.+++.+.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.              
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  142 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR--------------  142 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC--------------
Confidence            699999999766655667788999999999999999999999999988778999999998766443              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-----
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                                  +....|+++|++++++++.++.++  .+++|++|+||+++|++....     
T Consensus       143 ----------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~~~  194 (243)
T PRK07102        143 ----------------------------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLPGP  194 (243)
T ss_pred             ----------------------------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCCcc
Confidence                                        556789999999999999999997  589999999999999975432     


Q ss_pred             CCCChhhhhccceeecccCC
Q 023896          240 GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ...++++.++.+++.+....
T Consensus       195 ~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        195 LTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             ccCCHHHHHHHHHHHHhCCC
Confidence            24678888888877666443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-30  Score=221.93  Aligned_cols=211  Identities=25%  Similarity=0.328  Sum_probs=176.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++..|+++||||++|||++++++|+++|++|++++|+........+++...+.   ++.++.+|+++++++.++++++.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG---EAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998777666666654433   277889999999999999999998


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++|||||........+.+.+.+++.+++|+.+++++++.+++.|.+++.++||++||..+..+.          
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~----------  153 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR----------  153 (274)
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----------
Confidence            8999999999999866655666788999999999999999999999999987777899999997765443          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC--
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH--  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~--  238 (275)
                                                      ++...|+++|++++.+++.++.++  +++++++|+||+++|++...  
T Consensus       154 --------------------------------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~  201 (274)
T PRK07775        154 --------------------------------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLP  201 (274)
T ss_pred             --------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCC
Confidence                                            556789999999999999999987  58999999999999885321  


Q ss_pred             -------------------CCCCChhhhhccceeecccC
Q 023896          239 -------------------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 -------------------~~~~~~~~~a~~~~~~~~~~  258 (275)
                                         .....+++.++.++.++..+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        202 AEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             hhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence                               11357777777776666544

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.2e-30  Score=209.95  Aligned_cols=183  Identities=28%  Similarity=0.351  Sum_probs=163.5

Q ss_pred             CCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh-
Q 023896            5 TKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT-   82 (275)
Q Consensus         5 ~~k~vlItGa~-~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-   82 (275)
                      ..|.|||||++ ||||.+++++|+++|+.|+.+.|..+.-..+....   +     +....+|+++++++.++..++++ 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~---g-----l~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF---G-----LKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh---C-----CeeEEeccCChHHHHHHHHHHhhC
Confidence            35889999986 89999999999999999999999987655554322   1     78899999999999999999998 


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .+|++|+|+||||..-..+..+.+.+..+++|++|++|+..+++++...+.+ .+|.|||+.|+.+..+.          
T Consensus        78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpf----------  146 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPF----------  146 (289)
T ss_pred             CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEecc----------
Confidence            7899999999999988888889999999999999999999999999976665 45899999999998776          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      |+.+.|.+||+|+++|++.|+.|+  -||+|..+.||-|.|++...
T Consensus       147 --------------------------------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  147 --------------------------------PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             --------------------------------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                                            888999999999999999999999  39999999999999987643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.8e-30  Score=221.86  Aligned_cols=187  Identities=25%  Similarity=0.356  Sum_probs=159.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++|||||++|||.+++++|+++|++|++++|+.. ..+...+.+.....   ++.++.+|+++++++.++++++.+.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGV---EVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCC---ceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998653 44455555543332   38889999999999999999999999


Q ss_pred             CCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC------CCeEEEEecCccccCCCcHH
Q 023896           85 GKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD------SPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        85 g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~  156 (275)
                      +++|++|||+|...  ..++.+.+.++|++.+++|+.+++.+++++.+.|.++.      .++||++||..+..+.    
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  154 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS----  154 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----
Confidence            99999999998743  23455678899999999999999999999999997654      3579999998776553    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|+.+|++++.+++.++.++  .+++|+.|+||++.|+
T Consensus       155 --------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~  196 (256)
T PRK12745        155 --------------------------------------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD  196 (256)
T ss_pred             --------------------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence                                                  556789999999999999999987  6899999999999998


Q ss_pred             CcC
Q 023896          235 INF  237 (275)
Q Consensus       235 ~~~  237 (275)
                      +..
T Consensus       197 ~~~  199 (256)
T PRK12745        197 MTA  199 (256)
T ss_pred             ccc
Confidence            753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=5.3e-30  Score=218.33  Aligned_cols=187  Identities=27%  Similarity=0.323  Sum_probs=166.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +..+|.|+|||+.+|.|+.+|++|.++|++|+..+.+++.++....+..     ..|...+++|++++++++++.+.+.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999988887777766553     12377889999999999999999988


Q ss_pred             hcC--CccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           83 QFG--KLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~g--~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ..+  ++=.||||||+. ..++.++.+.+++++++++|++|+..++++++|.+++.+ |||||+||+.|-.+.       
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~-------  172 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVAL-------  172 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccC-------
Confidence            764  689999999964 456677899999999999999999999999999998765 899999999987665       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         |...+|++||.|++.++-+++.|+  -||.|..|.||..+|++..
T Consensus       173 -----------------------------------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  173 -----------------------------------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             -----------------------------------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                                               788999999999999999999998  5999999999999999875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2e-29  Score=215.82  Aligned_cols=220  Identities=22%  Similarity=0.212  Sum_probs=175.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++++++|||||++|||.++++.|+++|++|++++|+..+.+...+++...+.   ++..+++|+++.+++.++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGT---EVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999887777777665432   378899999999999999999988


Q ss_pred             hcCCccEEEcCCcccccchh---------hccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCC
Q 023896           83 QFGKLDILTKGDAEVDWSKV---------CYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKD  152 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~  152 (275)
                      .++++|++|||+|.......         ...+.+.++.++++|+.+++.+++.+.+.|.+. ..++|+++||... .+.
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~  157 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGN  157 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCC
Confidence            88999999999986443211         355778999999999999999999999998755 4578999988532 222


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|+++|++++.++++++.++  .++++++++||+
T Consensus       158 ------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~  195 (253)
T PRK08217        158 ------------------------------------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGV  195 (253)
T ss_pred             ------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCC
Confidence                                                      456789999999999999999997  689999999999


Q ss_pred             eecCCcCCC---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          231 VKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       231 v~T~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ++|++....               ...++++.++....++.  ....+|..+..+
T Consensus       196 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~g~~~~~~  248 (253)
T PRK08217        196 IETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIE--NDYVTGRVLEID  248 (253)
T ss_pred             CcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc--CCCcCCcEEEeC
Confidence            999875422               12356666666655553  223455554443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=217.85  Aligned_cols=217  Identities=22%  Similarity=0.185  Sum_probs=179.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+..+.+...+++..     .++.++++|+.+.+++.++++++.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999887776665521     2378899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++||++|.....++.+.+.++|...+.+|+.+++.+++++.+.+.+++.++||++||..+...              
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  142 (257)
T PRK07074         77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA--------------  142 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC--------------
Confidence            999999999987665666778899999999999999999999999998777789999999654321              


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-----  238 (275)
                                                   .+...|+.+|++++.+++.++.++  .+++||+++||++.|++...     
T Consensus       143 -----------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~  193 (257)
T PRK07074        143 -----------------------------LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN  193 (257)
T ss_pred             -----------------------------CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC
Confidence                                         234579999999999999999998  58999999999999986421     


Q ss_pred             -------------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 -------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 -------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                   .....+++.++..+.++.......+|..+..+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  238 (257)
T PRK07074        194 PQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD  238 (257)
T ss_pred             hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeC
Confidence                         11356777777777766544444555655443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=214.72  Aligned_cols=214  Identities=23%  Similarity=0.270  Sum_probs=172.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||++|||.+++++|+++|++|++++|+....+.. +++   .    .+.+..+|+++.++++++++++.+  ++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~---~----~~~~~~~D~~d~~~~~~~~~~~~~--~~   71 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL---P----GVHIEKLDMNDPASLDQLLQRLQG--QR   71 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc---c----ccceEEcCCCCHHHHHHHHHHhhc--CC
Confidence            6899999999999999999999999999999998765433 221   1    166788999999999999988754  48


Q ss_pred             ccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           87 LDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        87 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +|++|||+|....  .+..+.+.+++++.+++|+.+++.+++.+++.+++. .++++++||..+..+.            
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~------------  138 (225)
T PRK08177         72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVEL------------  138 (225)
T ss_pred             CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCcccccc------------
Confidence            9999999987533  234567789999999999999999999999998743 4799999997765432            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGIL  242 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~~  242 (275)
                                                 .+......|+++|++++.+++.++.++  ++|+||+|+||+++|++......+
T Consensus       139 ---------------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~~~  191 (225)
T PRK08177        139 ---------------------------PDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNAPL  191 (225)
T ss_pred             ---------------------------CCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCCCC
Confidence                                       111345679999999999999999998  689999999999999998776678


Q ss_pred             ChhhhhccceeecccCCCCCcceEeccC
Q 023896          243 SVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       243 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ++++.++.++..+........+.++.+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (225)
T PRK08177        192 DVETSVKGLVEQIEAASGKGGHRFIDYQ  219 (225)
T ss_pred             CHHHHHHHHHHHHHhCCccCCCceeCcC
Confidence            8888888877776666555555555433

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=220.50  Aligned_cols=183  Identities=22%  Similarity=0.263  Sum_probs=160.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|++|||||+||||++++++|+++|++|++++|+.+..+...+...      .++.++++|+++.+++.++++++.+.++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG------DRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999876655443321      1378899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+||||||.....+..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.             
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  142 (276)
T PRK06482         76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY-------------  142 (276)
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC-------------
Confidence            9999999999877666667788999999999999999999999999988777899999997665432             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                   ++...|++||++++.+++.++.++  .+++++.++||++.|++.
T Consensus       143 -----------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~  186 (276)
T PRK06482        143 -----------------------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFG  186 (276)
T ss_pred             -----------------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCc
Confidence                                         567899999999999999999997  589999999999998874

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.2e-29  Score=217.43  Aligned_cols=189  Identities=29%  Similarity=0.370  Sum_probs=160.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH--HHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~   78 (275)
                      +++.+|++|||||++|||+++|+.|+++|++|+++.|+...  .+...+... .... ......++|+++ .++++.+++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-GRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-CcEEEEEecCCCCHHHHHHHHH
Confidence            35689999999999999999999999999999988887654  333333333 1110 237788899998 999999999


Q ss_pred             HHHhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      ++.+.+|++|++|||||.... .++.+.+.++|++.+++|+.+++.+.+.+.|.+.++   +||++||+.+. +.     
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~-----  149 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG-----  149 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC-----
Confidence            999999999999999998776 477788889999999999999999999888888733   99999998876 53     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC-CchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                           ++ ...|++||+|++++++.++.++  .||++|+|+||++.|+
T Consensus       150 -------------------------------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         150 -------------------------------------PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             -------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence                                                 44 4899999999999999999887  5899999999999999


Q ss_pred             CcCC
Q 023896          235 INFH  238 (275)
Q Consensus       235 ~~~~  238 (275)
                      +...
T Consensus       193 ~~~~  196 (251)
T COG1028         193 MTAA  196 (251)
T ss_pred             chhh
Confidence            8754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=212.87  Aligned_cols=214  Identities=28%  Similarity=0.276  Sum_probs=175.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+++||||+++||++++++|+++|++|++++|+.+..+..    ....     +.++.+|+++.++++++++++..  ++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~~-----~~~~~~D~~~~~~v~~~~~~~~~--~~   70 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QALG-----AEALALDVADPASVAGLAWKLDG--EA   70 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhcc-----ceEEEecCCCHHHHHHHHHHhcC--CC
Confidence            5899999999999999999999999999999998765443    2221     45789999999999998876643  47


Q ss_pred             ccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           87 LDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        87 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +|++|||+|...  ..+..+.+.++|++.+++|+.+++.+++++.|.|.+. .++++++||..+..+..           
T Consensus        71 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  138 (222)
T PRK06953         71 LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDA-----------  138 (222)
T ss_pred             CCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccc-----------
Confidence            999999998753  2334456889999999999999999999999988654 57999999987765420           


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCCCCCCh
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSV  244 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~~~~~~  244 (275)
                                                  .......|+++|++++.+++.++.++++++||.|+||+++|++.....++++
T Consensus       139 ----------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~  190 (222)
T PRK06953        139 ----------------------------TGTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGAQAALDP  190 (222)
T ss_pred             ----------------------------cCCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCCCCCCCH
Confidence                                        0012236999999999999999999999999999999999999877677899


Q ss_pred             hhhhccceeecccCCCCCcceEeccCc
Q 023896          245 EEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       245 ~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ++.++.+...+........++||.++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (222)
T PRK06953        191 AQSVAGMRRVIAQATRRDNGRFFQYDG  217 (222)
T ss_pred             HHHHHHHHHHHHhcCcccCceEEeeCC
Confidence            999988888666556789999997654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=3e-29  Score=213.49  Aligned_cols=224  Identities=28%  Similarity=0.315  Sum_probs=185.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++.+|++|||||+|+||.+++++|+++|++|++++|+..+.+....++...+..   +.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE---ARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHH
Confidence            677899999999999999999999999999999999998877766666644333   78888999999999999999988


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|++||++|.....+..+.+.+++++.++.|+.+++.+++++.+.|.+.+.++||++||..+..+.          
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~----------  148 (246)
T PRK05653         79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN----------  148 (246)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC----------
Confidence            8999999999999876666667788999999999999999999999999987777899999997665432          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      .+...|+.+|++++.+++.++.++  .++++++|+||.+.+++.... 
T Consensus       149 --------------------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~  196 (246)
T PRK05653        149 --------------------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP  196 (246)
T ss_pred             --------------------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh
Confidence                                            456789999999999999999987  589999999999999875421 


Q ss_pred             --------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 --------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 --------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                    ...++++.++.+..++.......++..+..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        197 EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence                          12455777777666655433445566655544

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=216.80  Aligned_cols=205  Identities=30%  Similarity=0.423  Sum_probs=174.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++++|||||+||||++++++|+++|++|++++|+....+...+++...+.   ++.++.+|+++++++.++++++.++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGG---EALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999998877777776665433   388889999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhcc-chhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQ-TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|++|||+|......+.+. +.+.+.+.+++|+.+++.+++.+.+.|.+. .+++|++||..+..+.            
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------  144 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGV------------  144 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCC------------
Confidence            99999999998766666666 889999999999999999999999998754 4799999997766543            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC---
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA---  239 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~---  239 (275)
                                                    ++...|+++|++++++++.++.++  .+++++++.||++.|++....   
T Consensus       145 ------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~  194 (263)
T PRK06181        145 ------------------------------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG  194 (263)
T ss_pred             ------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc
Confidence                                          566889999999999999999987  589999999999999874311   


Q ss_pred             -------------CCCChhhhhccceeecc
Q 023896          240 -------------GILSVEEGAESPVKLAL  256 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~  256 (275)
                                   ...++++.++.++..+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        195 DGKPLGKSPMQESKIMSAEECAEAILPAIA  224 (263)
T ss_pred             cccccccccccccCCCCHHHHHHHHHHHhh
Confidence                         23567777776666554

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=5.1e-29  Score=212.77  Aligned_cols=224  Identities=22%  Similarity=0.191  Sum_probs=175.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+.+.++++|||||+|+||++++++|+++|++|++++|+. +..+...+.+......  .+.++.+|+++++++.+++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG--SAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--ceEEEEcCCCCHHHHHHHHHH
Confidence            6778889999999999999999999999999999999864 4445544455433222  277889999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++||+||.....+....+.+++++.+++|+.+++.+++++.+.+.+. .+.+++++|..+..+        
T Consensus        79 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--------  149 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERP--------  149 (249)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCC--------
Confidence            99999999999999997665555566788999999999999999999999998764 468888887544322        


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        .++...|+.+|++++.+++.++.++ ++++++++.||++.|++...
T Consensus       150 ----------------------------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        150 ----------------------------------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             ----------------------------------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc
Confidence                                              2567899999999999999999998 68999999999999987432


Q ss_pred             C----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .                ...++++.++.+..++.. .....|..|..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~i~  242 (249)
T PRK09135        196 SFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILAVD  242 (249)
T ss_pred             cCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEEEC
Confidence            1                123566667666544443 222345544443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=4.7e-29  Score=212.56  Aligned_cols=225  Identities=28%  Similarity=0.307  Sum_probs=181.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||+|+||.+++++|+++|++|++..|+.. ..+...+++....   .++..+.+|+++.+++.++++++
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~   77 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG---GKALAVQGDVSDAESVERAVDEA   77 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999988887665 3445555554332   23888899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|++||++|.....+..+.+.+.+++.+++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.        
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~--------  149 (248)
T PRK05557         78 KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN--------  149 (248)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC--------
Confidence            999999999999999876666667788999999999999999999999999987777899999998766543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .+++++.++||+++|++...
T Consensus       150 ----------------------------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        150 ----------------------------------PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             ----------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence                                              557789999999999999999987  68999999999999886533


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .               ...++++.++.+..+........+|..+..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        196 LPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             cChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence            2               12456666666655554333445666665543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.2e-29  Score=212.27  Aligned_cols=226  Identities=25%  Similarity=0.278  Sum_probs=184.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+.++.|++|||||+|+||++++++|+++|++|++..|+.. ..+...+.+.....   ++.++.+|+++.+++.+++++
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGR---RAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC---ceEEEECCcCCHHHHHHHHHH
Confidence            77788899999999999999999999999999888666554 44444444444332   278899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++||++|......+.+.+.+.+++.+++|+.+++.+++.+.+++++.+.+++|++||..+..+.       
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-------  150 (249)
T PRK12825         78 AVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-------  150 (249)
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-------
Confidence            9888899999999999877666667788999999999999999999999999988777899999998776443       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+.+|++++++++.++.++  .+++++.++||++.|++..
T Consensus       151 -----------------------------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (249)
T PRK12825        151 -----------------------------------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE  195 (249)
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence                                               456789999999999999999987  6899999999999998753


Q ss_pred             CC---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          238 HA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       238 ~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ..               ...++++.++.+..++........|..|..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        196 ATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             cccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            21               12356777777776665544455666666554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=3.4e-29  Score=214.70  Aligned_cols=222  Identities=24%  Similarity=0.317  Sum_probs=184.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||+|+||++++++|+++|++|++++|+....+...+++.....   ++.++.+|+++.+++..+++++.+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGG---SVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999998877777666654332   388899999999999999999999899


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++||++|..........+.+++++.+++|+.+++.+++.+++.|++.+.+++|++||..+..+.             
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-------------  144 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS-------------  144 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-------------
Confidence            9999999999866555556678899999999999999999999999987777899999997665443             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-----  238 (275)
                                                   +....|+.+|++++.+++.++.++  .+++++.++||++.|++...     
T Consensus       145 -----------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~  195 (255)
T TIGR01963       145 -----------------------------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQ  195 (255)
T ss_pred             -----------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhh
Confidence                                         556789999999999999999887  58999999999999875210     


Q ss_pred             ----------------------CCCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          239 ----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       239 ----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                            ....++++.++..+.++..+....++..|..+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       196 AKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             hcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence                                  1246788888888877765544556666666543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=8.4e-30  Score=246.07  Aligned_cols=188  Identities=22%  Similarity=0.195  Sum_probs=164.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+.+|++|||||++|||++++++|+++|++|++++|+...++...+++...... ..+..+++|+++.+++.++++++.+
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-GRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877776666543221 1277889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .||++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.         
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---------  560 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---------  560 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC---------
Confidence            999999999999987666666778999999999999999999999999998664 5799999998776554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                       ++...|+++|++++.+++.++.++  .+||||+|+||+|.|
T Consensus       561 ---------------------------------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       561 ---------------------------------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             ---------------------------------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence                                             567899999999999999999998  589999999999975

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=217.37  Aligned_cols=216  Identities=21%  Similarity=0.227  Sum_probs=170.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      |+++||||+||||++++++|+++|++|++++|+.. .++..    .....  .++.++++|+++.++++++++++.+.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQYN--SNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----HhccC--CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999873 33322    22111  2378899999999999999999887765


Q ss_pred             C--cc--EEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHh
Q 023896           86 K--LD--ILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        86 ~--id--~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .  ++  ++|+|+|... ..++.+.+.++|.+.+++|+.+++.+++.++|.|++. ..++||++||..+..+.       
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  148 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY-------  148 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC-------
Confidence            3  22  7899998753 3456677899999999999999999999999999874 35799999997665433       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~  235 (275)
                                                         ++...|+++|++++.+++.++.++    .+++||+|+||+++|++
T Consensus       149 -----------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        149 -----------------------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             -----------------------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence                                               667899999999999999999986    47999999999999987


Q ss_pred             cCC---------------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          236 NFH---------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       236 ~~~---------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ...                     ....++++.++.++.++... ...+|..+..++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        194 QAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence            421                     01356777777777766642 445666665543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1e-29  Score=204.64  Aligned_cols=163  Identities=31%  Similarity=0.454  Sum_probs=148.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC--hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD--EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|||||++|||++++++|+++|. .|++++|+  .+..++..+++...+.   ++.++++|++++++++++++++.+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGA---KITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTS---EEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence            7899999999999999999999965 78899999  6777778788875553   3999999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ++++|++|||+|......+.+.+.++|++.|++|+++++.+.+.+.|    ++.++||++||+.+..+.           
T Consensus        78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~-----------  142 (167)
T PF00106_consen   78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGS-----------  142 (167)
T ss_dssp             HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSS-----------
T ss_pred             cccccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCC-----------
Confidence            99999999999998888888889999999999999999999999999    346899999999988776           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                                                     ++...|+++|+++++|+++++.|+
T Consensus       143 -------------------------------~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  143 -------------------------------PGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             -------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------------------------CCChhHHHHHHHHHHHHHHHHHhc
Confidence                                           788999999999999999999884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=213.02  Aligned_cols=209  Identities=21%  Similarity=0.205  Sum_probs=172.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|++|||||++|||++++++|+++|++|++++|+...      .   .  .   ..++.+|+++.++++++++++.+.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~---~--~---~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D---F--P---GELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c---c--C---ceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999998753      0   0  0   2467899999999999999988876


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++++.++||++||... .+.            
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~------------  133 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGA------------  133 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCC------------
Confidence             589999999987766666778899999999999999999999999998877789999999642 222            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC--
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG--  240 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~--  240 (275)
                                                    +....|+++|++++.+++.++.++  .++++++|+||++.|++.....  
T Consensus       134 ------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~  183 (234)
T PRK07577        134 ------------------------------LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV  183 (234)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc
Confidence                                          456789999999999999999998  5899999999999998753211  


Q ss_pred             ----------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          241 ----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       241 ----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                      ...+++.++.++.++..+....+|.++..+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        184 GSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDG  230 (234)
T ss_pred             chhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence                            1257777777777666555556677766553

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=215.88  Aligned_cols=198  Identities=21%  Similarity=0.257  Sum_probs=162.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++++||||++|||++++++|+++|++|++++|+.++++...+    ...   .+.++++|++++++++++++++..   .
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~D~~~~~~~~~~~~~~~~---~   71 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSA---NIFTLAFDVTDHPGTKAALSQLPF---I   71 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcC---CCeEEEeeCCCHHHHHHHHHhccc---C
Confidence            689999999999999999999999999999999876554432    111   277889999999999999887642   4


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|++|||||.....+....+.++|++.+++|+.+++++++++.|.|.+  +++||++||..+..+.              
T Consensus        72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~--------------  135 (240)
T PRK06101         72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELAL--------------  135 (240)
T ss_pred             CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCC--------------
Confidence            799999998654333335688899999999999999999999999853  4689999998776553              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-----
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                                  ++...|+++|++++.+++.++.|+  +++++++|+||+++|++....     
T Consensus       136 ----------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~~  187 (240)
T PRK06101        136 ----------------------------PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAMP  187 (240)
T ss_pred             ----------------------------CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCCC
Confidence                                        567789999999999999999987  689999999999999986432     


Q ss_pred             CCCChhhhhccceeecccC
Q 023896          240 GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       240 ~~~~~~~~a~~~~~~~~~~  258 (275)
                      ...++++.++.++..+...
T Consensus       188 ~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        188 MIITVEQASQEIRAQLARG  206 (240)
T ss_pred             cccCHHHHHHHHHHHHhcC
Confidence            1358888888877666543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-29  Score=213.75  Aligned_cols=216  Identities=22%  Similarity=0.181  Sum_probs=175.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.++.+...+..     .   ..++.+|+++.+++.++++.  
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~---~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----G---CEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----C---CeEEEecCCCHHHHHHHHHH--
Confidence            4567899999999999999999999999999999999987665544332     1   45688999999988877664  


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                        ++++|++|||+|.....+..+.+.+++++.+.+|+.+++.+++++.+.+++++ .++||++||..+..+.        
T Consensus        75 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  144 (245)
T PRK07060         75 --AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL--------  144 (245)
T ss_pred             --hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC--------
Confidence              47899999999987666666678899999999999999999999999987554 4799999997766543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +....|+++|++++.+++.++.++  .++++++++||++.|++...
T Consensus       145 ----------------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  190 (245)
T PRK07060        145 ----------------------------------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE  190 (245)
T ss_pred             ----------------------------------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh
Confidence                                              556789999999999999999998  58999999999999987421


Q ss_pred             -----------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 -----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 -----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                       ....++++.++..+.++..+....+|+++..++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        191 AWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             hccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence                             013577788888877776555566677766554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=2.4e-29  Score=213.61  Aligned_cols=210  Identities=21%  Similarity=0.280  Sum_probs=166.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      |+++||||++|||++++++|+++|  ..|++..|+....      .   .  ...+.++++|+++.++++++.    +.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~---~--~~~~~~~~~Dls~~~~~~~~~----~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F---Q--HDNVQWHALDVTDEAEIKQLS----EQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c---c--cCceEEEEecCCCHHHHHHHH----Hhc
Confidence            479999999999999999999985  5677777765321      1   1  123788999999999987754    456


Q ss_pred             CCccEEEcCCccccc------chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           85 GKLDILTKGDAEVDW------SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        85 g~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +++|++|||||....      ..+.+.+.+.|++.+++|+.+++.+++.++|.|++.+.++++++||..+....      
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~------  139 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD------  139 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc------
Confidence            899999999998643      23445677889999999999999999999999987777899999986654321      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~  234 (275)
                                                       ...++...|+++|++++.|++.++.|+    ++++||+|+||+++|+
T Consensus       140 ---------------------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~  186 (235)
T PRK09009        140 ---------------------------------NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTA  186 (235)
T ss_pred             ---------------------------------CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecC
Confidence                                             112456789999999999999999997    4899999999999999


Q ss_pred             CcCCC-------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          235 INFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       235 ~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +....       ...+|++.++.++.++.......+|.++...
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        187 LSKPFQQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD  229 (235)
T ss_pred             CCcchhhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence            86432       2468899999998888776666677776544

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=209.45  Aligned_cols=180  Identities=18%  Similarity=0.176  Sum_probs=154.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +++||||++|||++++++|+++ ++|++++|+..                    .+++|+++++++++++++    ++++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            6999999999999999999999 99999998753                    257999999998888764    4789


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++|||||.....++.+.+.++|++.+++|+.+++++++.+.|+|++  .++|+++||..+..+.               
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~---------------  119 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPI---------------  119 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCC---------------
Confidence            99999999877677777889999999999999999999999999964  4799999998876543               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCC------CC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH------AG  240 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~------~~  240 (275)
                                                 ++...|+++|++++++++.++.|+ ++|+||+|+||+++|++...      ..
T Consensus       120 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~  172 (199)
T PRK07578        120 ---------------------------PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYGPFFPGFE  172 (199)
T ss_pred             ---------------------------CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhhhcCCCCC
Confidence                                       677899999999999999999998 68999999999999986421      13


Q ss_pred             CCChhhhhccceeecc
Q 023896          241 ILSVEEGAESPVKLAL  256 (275)
Q Consensus       241 ~~~~~~~a~~~~~~~~  256 (275)
                      ..++++.++..+..+.
T Consensus       173 ~~~~~~~a~~~~~~~~  188 (199)
T PRK07578        173 PVPAARVALAYVRSVE  188 (199)
T ss_pred             CCCHHHHHHHHHHHhc
Confidence            5788888887665554

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-29  Score=214.86  Aligned_cols=189  Identities=24%  Similarity=0.262  Sum_probs=162.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||+|+||+.++++|+++|++|++++|+.+..+...++....     ++.++.+|+++++++.++++++
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~   80 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-----KVTATVADVADPAQVERVFDTA   80 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-----ceEEEEccCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999987766655544322     3788999999999999999999


Q ss_pred             HhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .+.++++|++||++|.. ........+.+.+.+.+++|+.+++.+++.+.+.+...+. ++|+++||..+..+.      
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~------  154 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY------  154 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC------
Confidence            99999999999999976 4444556788999999999999999999999998876655 688999987765443      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          +....|+.+|++++.+++.++.++  .+++++++.||++.|++.
T Consensus       155 ------------------------------------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        155 ------------------------------------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             ------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence                                                556789999999999999999987  689999999999998864

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=2.1e-29  Score=214.57  Aligned_cols=205  Identities=22%  Similarity=0.245  Sum_probs=176.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHH-HHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASV-SSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v-~~~~~~~~~~~   84 (275)
                      |++++|||||.|||++.+++||++|.+|++++|++++++..++++.+....  .++.+.+|+++.+++ +++-+.+.+  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~v--ev~~i~~Dft~~~~~ye~i~~~l~~--  124 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKV--EVRIIAIDFTKGDEVYEKLLEKLAG--  124 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCc--EEEEEEEecCCCchhHHHHHHHhcC--
Confidence            589999999999999999999999999999999999999999999987662  399999999998873 333332321  


Q ss_pred             CCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           85 GKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        85 g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ..|.+||||+|...  +..+.+.+.+.+.+++++|..+...+.+.++|.|.++++|-|||+||.+|..+.          
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~----------  194 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPT----------  194 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccC----------
Confidence            37889999999877  455556777799999999999999999999999999999999999999998876          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      |..+.|+++|+.++.++++|+.|+  .+|.|-++.|+.|.|.|.... 
T Consensus       195 --------------------------------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  195 --------------------------------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             --------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence                                            778999999999999999999999  699999999999999997543 


Q ss_pred             ---CCCChhhhhccceeecc
Q 023896          240 ---GILSVEEGAESPVKLAL  256 (275)
Q Consensus       240 ---~~~~~~~~a~~~~~~~~  256 (275)
                         ...+|+..++..+.-+.
T Consensus       243 ~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  243 PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             CCCcCcCHHHHHHHHHhhcC
Confidence               23577888877776555

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=8.4e-29  Score=211.31  Aligned_cols=218  Identities=29%  Similarity=0.290  Sum_probs=173.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      |++|||||+||||++++++|+++|++|++. .|+.++..+...++...+.   ++..+++|++++++++++++++.+.++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG---KAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCC---eEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999874 6777766666666654432   277899999999999999999999999


Q ss_pred             CccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHHhhh
Q 023896           86 KLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        86 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++|++|||+|.. ...+..+.+.++++..+++|+.+++.+++.+++.+.+..   .+++|++||..+..+.         
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---------  149 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---------  149 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------
Confidence            999999999975 334455678899999999999999999999999987542   4789999997765442         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC-CchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                       ++ ...|+++|++++.+++.++.++  +++++++++||++.|++...
T Consensus       150 ---------------------------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~  196 (247)
T PRK09730        150 ---------------------------------PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS  196 (247)
T ss_pred             ---------------------------------CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccccc
Confidence                                             22 3579999999999999999987  68999999999999987432


Q ss_pred             C----------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          239 A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       239 ~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      .                ...++++.++.++.++..+.....|.++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~  243 (247)
T PRK09730        197 GGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDL  243 (247)
T ss_pred             CCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEec
Confidence            1                012566667666665554444455555544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.7e-29  Score=231.42  Aligned_cols=184  Identities=24%  Similarity=0.294  Sum_probs=158.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||++|||++++++|+++|++|++++|..  +.++...+++   .     ...+++|+++.++++++++++.
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~-----~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G-----GTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C-----CeEEEEeCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998853  2222222221   1     3468899999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||||......+.+.+.+.|+..+++|+.+++++.+.+.+.+..++.++||++||..+..+.         
T Consensus       280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~---------  350 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN---------  350 (450)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---------
Confidence            99999999999999877666777899999999999999999999999996544556899999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|+++|++++.+++.++.++  .++++|+|+||+++|++..
T Consensus       351 ---------------------------------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~  395 (450)
T PRK08261        351 ---------------------------------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA  395 (450)
T ss_pred             ---------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh
Confidence                                             567899999999999999999998  6899999999999998764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-29  Score=211.50  Aligned_cols=220  Identities=24%  Similarity=0.251  Sum_probs=167.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.++++|+++||||+||||++++++|+++|++|++++|+.. ..+....+++..+.   .+..+++|+++.+++.+++++
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG---RASAVGADLTDEESVAALMDT   77 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHH
Confidence            67889999999999999999999999999999999999764 45555555554332   277899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.++++|++|||||.....      ...+.+.+++|+.+++++++++.+.|.+  .+++|++||..+....       
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~-------  142 (248)
T PRK07806         78 AREEFGGLDALVLNASGGMES------GMDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIP-------  142 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCCC------CCCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCc-------
Confidence            999999999999999864321      1235678999999999999999999853  4799999995432100       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                    .....+.+..|+.+|++++.+++.++.++  .+|+||+|+||++.|++..
T Consensus       143 ------------------------------~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        143 ------------------------------TVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             ------------------------------cccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh
Confidence                                          00111346789999999999999999998  6899999999999987542


Q ss_pred             CC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                 ...++++.++.++.++..+  ..+|..+..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~--~~~g~~~~i~  240 (248)
T PRK07806        193 TLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAP--VPSGHIEYVG  240 (248)
T ss_pred             hhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcc--ccCccEEEec
Confidence            10                 2346667776666655522  2345544433

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.3e-28  Score=207.86  Aligned_cols=201  Identities=27%  Similarity=0.292  Sum_probs=169.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ||++.+++++||||+|+||++++++|+++|+ +|++++|+.++...       ..   ..+.++.+|+++.+++.+++++
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~---~~~~~~~~D~~~~~~~~~~~~~   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LG---PRVVPLQLDVTDPASVAAAAEA   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cC---CceEEEEecCCCHHHHHHHHHh
Confidence            7889999999999999999999999999999 99999999865433       11   1278899999999998877664


Q ss_pred             HHhhcCCccEEEcCCcc-cccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                          ++++|++||++|. .....+.+.+.+.+.+.+++|+.+++.+++++.+.+.+.+.+++|++||..+..+.      
T Consensus        71 ----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------  140 (238)
T PRK08264         71 ----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF------  140 (238)
T ss_pred             ----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC------
Confidence                4689999999998 44455667789999999999999999999999999987777899999997766543      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|+.+|++++.+++.++.++  .+++++++.||.++|++.
T Consensus       141 ------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        141 ------------------------------------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             ------------------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence                                                566789999999999999999998  589999999999999985


Q ss_pred             CCC--CCCChhhhhccceeeccc
Q 023896          237 FHA--GILSVEEGAESPVKLALL  257 (275)
Q Consensus       237 ~~~--~~~~~~~~a~~~~~~~~~  257 (275)
                      ...  ...++++.++..+..+..
T Consensus       185 ~~~~~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        185 AGLDAPKASPADVARQILDALEA  207 (238)
T ss_pred             ccCCcCCCCHHHHHHHHHHHHhC
Confidence            432  246777777777665553

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=8.3e-28  Score=204.27  Aligned_cols=220  Identities=18%  Similarity=0.169  Sum_probs=178.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|+++||||++|||.++++.|+++|++|++++|+.++.+...+++....    .+..+++|+++.++++++++++.
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~   76 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG----NIHYVVGDVSSTESARNVIEKAA   76 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEECCCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999887766655554322    27888999999999999999998


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ..++++|.+++++|.....+..  ..+.+++.+++|+.+++.+++.+.|.+.+  .+++|++||..+..+.         
T Consensus        77 ~~~~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~---------  143 (238)
T PRK05786         77 KVLNAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKA---------  143 (238)
T ss_pred             HHhCCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccC---------
Confidence            8889999999999865433332  33889999999999999999999999854  4799999997654211         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                      .+....|+++|++++.+++.++.++  ++++++.|+||++.|++... 
T Consensus       144 --------------------------------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~  191 (238)
T PRK05786        144 --------------------------------SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER  191 (238)
T ss_pred             --------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh
Confidence                                            1445679999999999999999997  68999999999999986421 


Q ss_pred             ---------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 ---------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                               ....++++.++.++.++..+.....|.++..+
T Consensus       192 ~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~  232 (238)
T PRK05786        192 NWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVD  232 (238)
T ss_pred             hhhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEEEEC
Confidence                     12467888888888877655555667666554

>PRK08324 short chain dehydrogenase; Validated

Probab=99.96  E-value=5.9e-28  Score=234.06  Aligned_cols=187  Identities=25%  Similarity=0.241  Sum_probs=167.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.+|++|||||+||||++++++|+++|++|++++|+..+.+...+++...    ..+.++++|+++++++.++++++.+.
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998877776666543    23888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +|++|++|||||.....++.+.+.+.|+..+++|+.+++.+++.+.+.|++++. |+||++||..+..+.          
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----------  565 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG----------  565 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC----------
Confidence            999999999999877777778899999999999999999999999999987664 899999998776554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee--ecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV--KTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v--~T~~~  236 (275)
                                                      ++...|+++|++++.+++.++.++  .+|+||.|+||+|  .|++.
T Consensus       566 --------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~  611 (681)
T PRK08324        566 --------------------------------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW  611 (681)
T ss_pred             --------------------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc
Confidence                                            567899999999999999999998  5899999999999  77754

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.6e-28  Score=206.82  Aligned_cols=180  Identities=23%  Similarity=0.281  Sum_probs=155.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||+||||++++++|+++|++|++++|+....+...+.....+..   +.++.+|+++.+++.++++      +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~------~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA---LRVEKLDLTDAIDRAQAAE------W   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---ceEEEeeCCCHHHHHHHhc------C
Confidence            578999999999999999999999999999999987766655544443322   7888999999998776643      3


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++|||||.....+..+.+.+.++..+++|+.+++.+++.+++.+.+++.++||++||..+..+.             
T Consensus        73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-------------  139 (257)
T PRK09291         73 DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-------------  139 (257)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-------------
Confidence            8999999999877667777889999999999999999999999999987777899999998766443             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                   ++...|+++|++++.+++.++.++  .++++++|+||++.|++.
T Consensus       140 -----------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~  183 (257)
T PRK09291        140 -----------------------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN  183 (257)
T ss_pred             -----------------------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence                                         556789999999999999999987  689999999999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.2e-28  Score=206.46  Aligned_cols=179  Identities=23%  Similarity=0.260  Sum_probs=150.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH-HHhhc--
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF-IKTQF--   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~--   84 (275)
                      ++|||||+||||++++++|+++|++|++++|+..+..     ....+   .++.++++|+++.+++++++++ +.+.+  
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAG---ERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccC---CeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            6999999999999999999999999999999875311     11111   2378899999999999998776 55555  


Q ss_pred             -CCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           85 -GKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        85 -g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                       +++|++|||+|.... .+..+.+.+.+++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.          
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  144 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY----------  144 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC----------
Confidence             479999999987543 44556788999999999999999999999999987777899999997765443          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                                                      ++...|+++|++++.+++.++.+. .++++++|+||+++|++.
T Consensus       145 --------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  187 (243)
T PRK07023        145 --------------------------------AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQ  187 (243)
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHH
Confidence                                            567899999999999999999985 589999999999999874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=1.5e-27  Score=202.48  Aligned_cols=217  Identities=30%  Similarity=0.354  Sum_probs=174.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +||||++++||..++++|+++|++|++++|+. ...+...+.+...+.   .+.++.+|++++++++++++.+.+.++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGV---KALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC---ceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999875 444455555544432   27889999999999999999999999999


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++||++|........+.+.+.+++.+++|+.+++.+++.+.+.+.+.+.++++++||..+..+.               
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~---------------  142 (239)
T TIGR01830        78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN---------------  142 (239)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC---------------
Confidence            99999999866555556778899999999999999999999999876667899999998776554               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC------
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA------  239 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~------  239 (275)
                                                 +....|+++|++++.+++.++.++  ++++++.++||+++|++....      
T Consensus       143 ---------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~  195 (239)
T TIGR01830       143 ---------------------------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKK  195 (239)
T ss_pred             ---------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHH
Confidence                                       566789999999999999999987  799999999999998865321      


Q ss_pred             ---------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                               ...++++.++..+.++.......+|.++..+
T Consensus       196 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~  235 (239)
T TIGR01830       196 KILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD  235 (239)
T ss_pred             HHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence                     1235666676666555433334566665554

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2e-27  Score=201.00  Aligned_cols=173  Identities=23%  Similarity=0.309  Sum_probs=148.2

Q ss_pred             EEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCccE
Q 023896           10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDI   89 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   89 (275)
                      |||||++|||++++++|+++|++|++++|+..+.+...++++. +   .++.++.+|+++++++.+++++    ++++|+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~~~~~~~~~~~~----~~~id~   72 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-G---APVRTAALDITDEAAVDAFFAE----AGPFDH   72 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C---CceEEEEccCCCHHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999999999998877766665542 1   2377889999999998888775    478999


Q ss_pred             EEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhH
Q 023896           90 LTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE  169 (275)
Q Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  169 (275)
                      +|||+|.....++.+.+.+++++++++|+.+++.+++  .+.+.  +.++||++||..+..+.                 
T Consensus        73 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~-----------------  131 (230)
T PRK07041         73 VVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPS-----------------  131 (230)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCC-----------------
Confidence            9999998666666677889999999999999999999  44453  45899999998776543                 


Q ss_pred             HHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                               ++...|+++|++++++++.++.++.++|||+++||+++|++.
T Consensus       132 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~  173 (230)
T PRK07041        132 -------------------------ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLW  173 (230)
T ss_pred             -------------------------CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHH
Confidence                                     567889999999999999999999779999999999999874

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.7e-27  Score=201.17  Aligned_cols=195  Identities=17%  Similarity=0.135  Sum_probs=146.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|+++||||++|||++++++|+++|++|++++|+......   .. .. ..   ...+++|+++.+++.+       
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~---~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP---NEWIKWECGKEESLDK-------   75 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC---CeEEEeeCCCHHHHHH-------
Confidence            3568999999999999999999999999999999998732111   11 11 11   2567899999987653       


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC---CCCeEEEEecCccccCCCcHHHHh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS---DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .++++|++|||||.....   +.+.++|++.+++|+.+++.+++.++|.|.++   .++.+++.||..+..+        
T Consensus        76 ~~~~iDilVnnAG~~~~~---~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~--------  144 (245)
T PRK12367         76 QLASLDVLILNHGINPGG---RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP--------  144 (245)
T ss_pred             hcCCCCEEEECCccCCcC---CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC--------
Confidence            357899999999975432   35789999999999999999999999999763   2234545555443321        


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHH---HHHHHhC--CCeEEEeecCCeeecC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT---RILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~---~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                         +....|++||+++..+.   +.++.++  .+++|+.++||+++|+
T Consensus       145 -----------------------------------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~  189 (245)
T PRK12367        145 -----------------------------------ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSE  189 (245)
T ss_pred             -----------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccc
Confidence                                               23567999999986543   4455454  6899999999999999


Q ss_pred             CcCCCCCCChhhhhccceeecccCC
Q 023896          235 INFHAGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       235 ~~~~~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      +.. ...++|++.++.+++.+...+
T Consensus       190 ~~~-~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        190 LNP-IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             cCc-cCCCCHHHHHHHHHHHHhcCC
Confidence            753 335789999998887776544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=9.7e-27  Score=198.03  Aligned_cols=189  Identities=22%  Similarity=0.209  Sum_probs=173.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +.++|||+++|||+++++++..+|++|.++.|+.++++++.++++...+... +.+..+|+++.+++.+.++++++.++.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~-v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVED-VSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccce-eeEeccccccHHHHHHHHhhhhhccCC
Confidence            6799999999999999999999999999999999999999988876543322 678889999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|.++||||...++-+.+.+++.++..+++|++|+++.+++.++.|.+.. .|+|+.+||.++..+.             
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i-------------  179 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI-------------  179 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc-------------
Confidence            99999999998888888999999999999999999999999999998765 5799999999988876             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                   .++++|+++|.|+.+++..++.|.  .+|+|..+.|+.++||....
T Consensus       180 -----------------------------~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~  225 (331)
T KOG1210|consen  180 -----------------------------YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER  225 (331)
T ss_pred             -----------------------------ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc
Confidence                                         789999999999999999999998  59999999999999997644

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.95  E-value=7.1e-27  Score=190.33  Aligned_cols=226  Identities=22%  Similarity=0.233  Sum_probs=186.1

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |..++||+.||+|-.  ..|+..+++.|.++|+++..++.++ ++++-.+++.+..+.   ..+++||+++.++++++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s---~~v~~cDV~~d~~i~~~f~   76 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS---DLVLPCDVTNDESIDALFA   76 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC---CeEEecCCCCHHHHHHHHH
Confidence            678899999999985  8999999999999999999999888 566666666554433   6789999999999999999


Q ss_pred             HHHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           79 FIKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.+++|++|.+||+-+..+.    +++.+.+.|.|...+++..++...+++++.|.|.  ++|+||.+|-..+.+..  
T Consensus        77 ~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs~r~v--  152 (259)
T COG0623          77 TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGSERVV--  152 (259)
T ss_pred             HHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccceeec--
Confidence            999999999999999887663    3455788999999999999999999999999995  57899999886665443  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              |.+...+++|+++++-+|++|.++  .+||||.|+-|+|+
T Consensus       153 ----------------------------------------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIr  192 (259)
T COG0623         153 ----------------------------------------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIR  192 (259)
T ss_pred             ----------------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchH
Confidence                                                    778899999999999999999999  69999999999999


Q ss_pred             cCCcCCCCC---CChhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          233 TDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       233 T~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      |--....+.   +-......+|+++..+.+++.+...||.++-++
T Consensus       193 TLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         193 TLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             HHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhc
Confidence            954332221   111222456777777777777777777777553

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=3e-26  Score=196.81  Aligned_cols=202  Identities=23%  Similarity=0.259  Sum_probs=167.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc-C
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-G   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g   85 (275)
                      |+++||||+||||.++++.|+++|++|++++|+.++.+...    ..+     +..+++|+++.+++..+++.+.... +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~~-----~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SLG-----FTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hCC-----CeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999987654432    111     6678999999999999998887654 6


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|.++||+|.....+..+.+.+++++.+++|+.|++.+++.+++.|.+.+.++||++||..+..+.             
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-------------  140 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-------------  140 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-------------
Confidence            8999999999766556667788999999999999999999999999988777899999998776543             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                                   +....|+++|++++.+++.++.++  .++++++|+||++.|++....    
T Consensus       141 -----------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~  191 (256)
T PRK08017        141 -----------------------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQ  191 (256)
T ss_pred             -----------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchh
Confidence                                         567889999999999999999886  689999999999999864321    


Q ss_pred             -------------CCCChhhhhccceeecccCC
Q 023896          240 -------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                                   ...++++.++.+...+..+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        192 SDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             hccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence                         12567777777666655444

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=5.5e-28  Score=188.66  Aligned_cols=188  Identities=22%  Similarity=0.273  Sum_probs=164.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+|-+.||||+.+|+|++.+.+|+++|+.|++.+-..++.++.++++...      +.+.++|++++.++...+.....
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~------~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGK------VVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCc------eEEeccccCcHHHHHHHHHHHHh
Confidence            346788999999999999999999999999999999888888888877432      88999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchh------hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC------CCeEEEEecCcccc
Q 023896           83 QFGKLDILTKGDAEVDWSKV------CYQTYELAVECLKTNYYGTKQTCEALIPLLELSD------SPRLVNLSSYVSAL  150 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~  150 (275)
                      +||++|.++||||+......      ..-+.|++++.+++|+.|+|++++.-...|-++.      +|.|||..|.++..
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            99999999999997443211      1246789999999999999999999888886553      47899999988876


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecC
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCP  228 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~p  228 (275)
                      +.                                          .+..+|++||.++..++--+++++  .+||+|.|.|
T Consensus       160 gq------------------------------------------~gqaaysaskgaivgmtlpiardla~~gir~~tiap  197 (260)
T KOG1199|consen  160 GQ------------------------------------------TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAP  197 (260)
T ss_pred             Cc------------------------------------------cchhhhhcccCceEeeechhhhhcccCceEEEeecc
Confidence            54                                          678999999999999999999998  5899999999


Q ss_pred             CeeecCCcCC
Q 023896          229 GFVKTDINFH  238 (275)
Q Consensus       229 G~v~T~~~~~  238 (275)
                      |.++||+...
T Consensus       198 glf~tpllss  207 (260)
T KOG1199|consen  198 GLFDTPLLSS  207 (260)
T ss_pred             cccCChhhhh
Confidence            9999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.5e-25  Score=185.90  Aligned_cols=198  Identities=24%  Similarity=0.296  Sum_probs=161.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|++|||||+|+||++++++|+++ ++|++++|+..+.+...+...       .+.++.+|+++.++++++++++    +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~----~   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-------GATPFPVDLTDPEAIAAAVEQL----G   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-------cceEEecCCCCHHHHHHHHHhc----C
Confidence            578999999999999999999999 999999999876554433221       1678899999999988877643    5


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++||++|.....+..+.+.++|.+.+++|+.+++.+.+.+++.+++. .+++|++||..+..+.             
T Consensus        71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-------------  136 (227)
T PRK08219         71 RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRAN-------------  136 (227)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcC-------------
Confidence            89999999998766555567889999999999999999999999988765 4799999997765443             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCC-eEEEeecCCeeecCCcCC------
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-FCVNCVCPGFVKTDINFH------  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~-i~vn~v~pG~v~T~~~~~------  238 (275)
                                                   ++...|+.+|.+++.+++.++.++.+ +++++|+||++.|++...      
T Consensus       137 -----------------------------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~  187 (227)
T PRK08219        137 -----------------------------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQEG  187 (227)
T ss_pred             -----------------------------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhhhc
Confidence                                         55678999999999999999998866 999999999998875321      


Q ss_pred             -----CCCCChhhhhccceeecccC
Q 023896          239 -----AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 -----~~~~~~~~~a~~~~~~~~~~  258 (275)
                           ....++++.++..+.++..+
T Consensus       188 ~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        188 GEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             cccCCCCCCCHHHHHHHHHHHHcCC
Confidence                 11367788887777766544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.93  E-value=5.6e-25  Score=199.56  Aligned_cols=195  Identities=19%  Similarity=0.200  Sum_probs=150.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.+...   .....   .+..+.+|+++++++.+.      
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~---~v~~v~~Dvsd~~~v~~~------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDL---PVKTLHWQVGQEAALAEL------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCC---CeEEEEeeCCCHHHHHHH------
Confidence            457899999999999999999999999999999999876543322   11111   266788999998876543      


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC----CeEEEEecCccccCCCcHHHH
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS----PRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----g~iv~vsS~~~~~~~~~~~~~  158 (275)
                       ++++|++|||||.....   +.+.+++++.+++|+.|++.++++++|.|++++.    +.+|++|+ ++..+       
T Consensus       243 -l~~IDiLInnAGi~~~~---~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-------  310 (406)
T PRK07424        243 -LEKVDILIINHGINVHG---ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-------  310 (406)
T ss_pred             -hCCCCEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-------
Confidence             35899999999975432   4678899999999999999999999999976542    34555554 32211       


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                          +....|++||+|+..++. ++++..++.|..++||+++|++.. 
T Consensus       311 ------------------------------------~~~~~Y~ASKaAl~~l~~-l~~~~~~~~I~~i~~gp~~t~~~~-  352 (406)
T PRK07424        311 ------------------------------------AFSPLYELSKRALGDLVT-LRRLDAPCVVRKLILGPFKSNLNP-  352 (406)
T ss_pred             ------------------------------------CCchHHHHHHHHHHHHHH-HHHhCCCCceEEEEeCCCcCCCCc-
Confidence                                                345679999999999985 444456788888999999999853 


Q ss_pred             CCCCChhhhhccceeecccCC
Q 023896          239 AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ...++|++.|+.+++.+....
T Consensus       353 ~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        353 IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CCCCCHHHHHHHHHHHHHCCC
Confidence            346899999999888776544

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.93  E-value=8.3e-25  Score=180.37  Aligned_cols=220  Identities=25%  Similarity=0.295  Sum_probs=178.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-----EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-----TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-----~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ..|++||||+++|||.+++++|++...     ++++++|+-+++++....+.+... ...++.++.+|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            478999999999999999999998754     478899999999999998887644 24458889999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhc---------------------------cchhHHHHhHHhhcccHHHHHHHHhhh
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCY---------------------------QTYELAVECLKTNYYGTKQTCEALIPL  131 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~---------------------------~~~~~~~~~~~~N~~~~~~l~~~~~~~  131 (275)
                      ++.++|.++|.+..|||.++..++++                           .+.+++.++|++|++|+|.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999877654433                           235688999999999999999999999


Q ss_pred             hhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHH
Q 023896          132 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  211 (275)
Q Consensus       132 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~  211 (275)
                      +...+...+|++||..+....              .+.+|.+-.                   .+..+|..||.++.-+.
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~--------------lsleD~q~~-------------------kg~~pY~sSKrl~DlLh  208 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKN--------------LSLEDFQHS-------------------KGKEPYSSSKRLTDLLH  208 (341)
T ss_pred             hhcCCCCeEEEEeeccccccc--------------CCHHHHhhh-------------------cCCCCcchhHHHHHHHH
Confidence            987666799999998765433              333333322                   45678999999999988


Q ss_pred             HHHHHhC--CCeEEEeecCCeeecCCcC-----------------------CCCCCChhhhhccceeeccc
Q 023896          212 RILAKRY--PKFCVNCVCPGFVKTDINF-----------------------HAGILSVEEGAESPVKLALL  257 (275)
Q Consensus       212 ~~~a~~~--~~i~vn~v~pG~v~T~~~~-----------------------~~~~~~~~~~a~~~~~~~~~  257 (275)
                      -++-+.+  .|+--++++||...|.+..                       +|..++|-.++.++++....
T Consensus       209 ~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l~  279 (341)
T KOG1478|consen  209 VALNRNFKPLGINQYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTLA  279 (341)
T ss_pred             HHHhccccccchhhhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhhc
Confidence            8887777  3788899999999887642                       22346777788888776643

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=4.6e-26  Score=185.40  Aligned_cols=190  Identities=23%  Similarity=0.234  Sum_probs=153.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.-..++++|+||++.|||..+++.+.+++.+.+..+++....+  .+.+....+.  .......|++.+.-...+++..
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd--~~v~~~g~~~e~~~l~al~e~~   76 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGD--DFVHVVGDITEEQLLGALREAP   76 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecC--CcceechHHHHHHHHHHHHhhh
Confidence            44456788999999999999999999888766555554443322  2222222221  1444567888888888899999


Q ss_pred             HhhcCCccEEEcCCccccc-chhh--ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVC--YQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++.+++.|++|||||.... ....  ..+.++|++.++.|+++...|.+.++|.+.+++ .+.+||+||.++..+.    
T Consensus        77 r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~----  152 (253)
T KOG1204|consen   77 RKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF----  152 (253)
T ss_pred             hhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc----
Confidence            9999999999999998654 2222  567889999999999999999999999998875 6899999999988765    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC-CeEEEeecCCeeecCC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-KFCVNCVCPGFVKTDI  235 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~i~vn~v~pG~v~T~~  235 (275)
                                                            .++++|+.+|+|.++|.+.+|.|.| ++++.+++||.|+|+|
T Consensus       153 --------------------------------------~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m  194 (253)
T KOG1204|consen  153 --------------------------------------SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM  194 (253)
T ss_pred             --------------------------------------cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence                                                  6788999999999999999999997 9999999999999998


Q ss_pred             c
Q 023896          236 N  236 (275)
Q Consensus       236 ~  236 (275)
                      .
T Consensus       195 q  195 (253)
T KOG1204|consen  195 Q  195 (253)
T ss_pred             H
Confidence            5

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=2.6e-24  Score=227.71  Aligned_cols=183  Identities=20%  Similarity=0.159  Sum_probs=156.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChh------------------------------------------
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEK------------------------------------------   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~------------------------------------------   41 (275)
                      +++++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5799999999999999999999998 699999999820                                          


Q ss_pred             -----HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHh
Q 023896           42 -----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKT  116 (275)
Q Consensus        42 -----~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~  116 (275)
                           .....++++...+.   ++.++.+|++|.++++++++++.+. ++||+||||||+.....+.+.+.++|++.|++
T Consensus      2076 ~~~~~ei~~~la~l~~~G~---~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGA---SAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence                 11112222333332   3788999999999999999999877 68999999999887777888999999999999


Q ss_pred             hcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC
Q 023896          117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH  196 (275)
Q Consensus       117 N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (275)
                      |+.|++++++++.+.+    .++||++||+.+..+.                                          ++
T Consensus      2152 nv~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~------------------------------------------~g 2185 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAEN----IKLLALFSSAAGFYGN------------------------------------------TG 2185 (2582)
T ss_pred             HHHHHHHHHHHHHHhC----CCeEEEEechhhcCCC------------------------------------------CC
Confidence            9999999999987754    2589999999988765                                          67


Q ss_pred             CchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcC
Q 023896          197 SSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       197 ~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~  237 (275)
                      ...|+++|.+++++++.++.+++++|||+|+||+++|+|..
T Consensus      2186 qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2186 QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCccc
Confidence            88999999999999999999998999999999999999853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=9e-25  Score=186.57  Aligned_cols=174  Identities=25%  Similarity=0.243  Sum_probs=126.5

Q ss_pred             HHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCccEEEcCCcccccch
Q 023896           22 TVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        22 ~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (275)
                      ++++|+++|++|++++|+.++.+     +         ..++++|+++.++++++++++.   +++|+||||||...   
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~---------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~---   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L---------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG---   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h---------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC---
Confidence            47899999999999999976531     1         2357899999999999988764   68999999999752   


Q ss_pred             hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhh
Q 023896          102 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK  181 (275)
Q Consensus       102 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (275)
                           .+.+++.+++|+.+++.+++.++|.|.+  .|+||++||..+..........+...+    ++ ..+. ...+  
T Consensus        61 -----~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~----~~-~~~~-~~~~--  125 (241)
T PRK12428         61 -----TAPVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAA----TA-SFDE-GAAW--  125 (241)
T ss_pred             -----CCCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhc----cc-hHHH-HHHh--
Confidence                 2358899999999999999999999864  479999999877532100000000000    00 0000 0000  


Q ss_pred             hhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHH-HhC--CCeEEEeecCCeeecCCcC
Q 023896          182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a-~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                             ....+.++...|++||++++.+++.++ .++  .+||||+|+||+|.|+|..
T Consensus       126 -------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~  177 (241)
T PRK12428        126 -------LAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG  177 (241)
T ss_pred             -------hhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccc
Confidence                   001233567889999999999999999 887  5899999999999999864

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=4.6e-23  Score=166.10  Aligned_cols=175  Identities=21%  Similarity=0.211  Sum_probs=143.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHH---HHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEA---VEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      |+++||||++|||.+++++|+++|+ .|++.+|+....+..   .++++..+.   ++..+.+|++++++++++++++..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA---EVTVVACDVADRAALAAALAAIPA   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876543322   234433322   377889999999999999999988


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|.+||++|.....+....+.+++++.+++|+.+++.+++.+.+    .+.+++|++||..+..+.          
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~----------  143 (180)
T smart00822       78 RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGN----------  143 (180)
T ss_pred             HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCC----------
Confidence            899999999999987665666778899999999999999999999843    345799999998776543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                                                      ++...|+++|++++.+++.++.  .++++..+.||++.
T Consensus       144 --------------------------------~~~~~y~~sk~~~~~~~~~~~~--~~~~~~~~~~g~~~  179 (180)
T smart00822      144 --------------------------------PGQANYAAANAFLDALAAHRRA--RGLPATSINWGAWA  179 (180)
T ss_pred             --------------------------------CCchhhHHHHHHHHHHHHHHHh--cCCceEEEeecccc
Confidence                                            5567899999999999988765  36779999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.87  E-value=8.1e-21  Score=164.90  Aligned_cols=234  Identities=23%  Similarity=0.172  Sum_probs=172.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+...+++|+||||+|.||++++++|+++||.|+.+.|++++.+. .+.+....+...+...+..||++++++.+.++  
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLRKLEGAKERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHHhcccCcccceEEeccccccchHHHHHh--
Confidence            566678999999999999999999999999999999999987433 23333344445569999999999999999888  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC-CcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~  159 (275)
                           ++|+|+|.|........     +.-.+.++.++.|+.++++++...-   .-.|||++||.++.... ......-
T Consensus        78 -----gcdgVfH~Asp~~~~~~-----~~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~  144 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDFDLE-----DPEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENS  144 (327)
T ss_pred             -----CCCEEEEeCccCCCCCC-----CcHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCc
Confidence                 79999999987655321     1344789999999999999997642   23599999999888654 1122222


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~  239 (275)
                      .++...|.+.+-                 ..    .-...|..||...+..+-.++.+. ++.+.+|.||.|-.|...+.
T Consensus       145 vvdE~~wsd~~~-----------------~~----~~~~~Y~~sK~lAEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~~  202 (327)
T KOG1502|consen  145 VVDEESWSDLDF-----------------CR----CKKLWYALSKTLAEKAAWEFAKEN-GLDLVTINPGLVFGPGLQPS  202 (327)
T ss_pred             ccccccCCcHHH-----------------HH----hhHHHHHHHHHHHHHHHHHHHHhC-CccEEEecCCceECCCcccc
Confidence            222222222110                 00    001469999999999999999885 89999999999988865431


Q ss_pred             ------------------------CCCChhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          240 ------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       240 ------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                                              ..+..++.|...+.++..|.  +.|+|++.++...
T Consensus       203 l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  203 LNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             cchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence                                    13577888888888777777  7799998877643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.87  E-value=1.2e-20  Score=168.03  Aligned_cols=166  Identities=20%  Similarity=0.209  Sum_probs=129.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+|+||++++++|+++|  ++|++.+|+..+.....+.+.   .  ..+.++.+|++|.+++.++++   
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~--~~~~~v~~Dl~d~~~l~~~~~---   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---A--PCLRFFIGDVRDKERLTRALR---   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---C--CcEEEEEccCCCHHHHHHHHh---
Confidence            468999999999999999999999986  789999998765433333221   1  137889999999998877765   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|++||+||.... +..+.   ...+.+++|+.+++++++++.+    .+.++||++||....            
T Consensus        74 ----~iD~Vih~Ag~~~~-~~~~~---~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~------------  129 (324)
T TIGR03589        74 ----GVDYVVHAAALKQV-PAAEY---NPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAA------------  129 (324)
T ss_pred             ----cCCEEEECcccCCC-chhhc---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCC------------
Confidence                58999999986432 22122   2346899999999999999875    344699999995432            


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                       .+...|+++|++.+.+++.++.+.  .+++++++.||.|..+
T Consensus       130 ---------------------------------~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       130 ---------------------------------NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             ---------------------------------CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence                                             234679999999999999987764  6899999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=3.4e-20  Score=151.60  Aligned_cols=173  Identities=23%  Similarity=0.267  Sum_probs=134.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh---hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++|||||.||||..+++.|+.++. +|++++|+.   ...+...+++...+.   ++.++++|++|++++.++++++.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccCccCHHHHHHHHHHHHhc
Confidence            799999999999999999999986 899999993   244566677776644   3999999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +++|+.+||.||......+.+.+.++++..+...+.|.++|.+.+.+    .+-..+|+.||+++..+.           
T Consensus        79 ~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~-----------  143 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGG-----------  143 (181)
T ss_dssp             SS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT------------
T ss_pred             cCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccC-----------
Confidence            99999999999998888888999999999999999999999998865    344699999999988776           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV  231 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v  231 (275)
                                                     ++...|+++.+.++.+++..+..  +..+.+|.-|+.
T Consensus       144 -------------------------------~gq~~YaaAN~~lda~a~~~~~~--g~~~~sI~wg~W  178 (181)
T PF08659_consen  144 -------------------------------PGQSAYAAANAFLDALARQRRSR--GLPAVSINWGAW  178 (181)
T ss_dssp             -------------------------------TTBHHHHHHHHHHHHHHHHHHHT--TSEEEEEEE-EB
T ss_pred             -------------------------------cchHhHHHHHHHHHHHHHHHHhC--CCCEEEEEcccc
Confidence                                           78999999999999999987664  455666665543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.85  E-value=5e-20  Score=165.58  Aligned_cols=186  Identities=20%  Similarity=0.067  Sum_probs=138.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..........+.. .   .++..+.+|+++.+++.+++++.   
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~~~~~~~~~~~~~---   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-A---KKIEDHFGDIRDAAKLRKAIAEF---   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-c---CCceEEEccCCCHHHHHHHHhhc---
Confidence            4689999999999999999999999999999999987654433333321 1   12667899999999988888754   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|++||+|+....    ..+.+++.+.+++|+.+++++++++...   ...+++|++||.........         
T Consensus        75 --~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~---------  136 (349)
T TIGR02622        75 --KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEW---------  136 (349)
T ss_pred             --CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCC---------
Confidence              68999999985332    2345667788999999999999987531   22469999999643311000         


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC------CCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY------PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~------~~i~vn~v~pG~v~T~~  235 (275)
                                           ...+.+..+..+...|+.+|.+.+.+++.++.++      ++++++++.|+.+..+.
T Consensus       137 ---------------------~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       137 ---------------------VWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             ---------------------CCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence                                 0012222333556789999999999999998876      38999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=1.6e-19  Score=168.13  Aligned_cols=172  Identities=17%  Similarity=0.188  Sum_probs=127.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc-----CC-CCCceeEEEecccChHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-----GV-DPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~-----~~-~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      .++|++|||||+||||++++++|+++|++|++++|+.++++...+.+...     +. ...++.++.+|+++.+++.+. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998877766655321     11 112378899999998886553 


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHH
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEK  156 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~  156 (275)
                            ++++|+||||+|....      ...++...+.+|+.++.++++++..    .+.++||++||+.+. .+.    
T Consensus       157 ------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~----  216 (576)
T PLN03209        157 ------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGF----  216 (576)
T ss_pred             ------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCc----
Confidence                  3589999999986532      1224677899999999999998864    345799999997643 110    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            +. ..|. +|.++..+.+.+..++  .++++|.|+||++.|+
T Consensus       217 --------------------------------------p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp  256 (576)
T PLN03209        217 --------------------------------------PA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERP  256 (576)
T ss_pred             --------------------------------------cc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCC
Confidence                                                  00 1132 5555555555555554  5899999999999887


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      +.
T Consensus       257 ~d  258 (576)
T PLN03209        257 TD  258 (576)
T ss_pred             cc
Confidence            53

>PRK06720 hypothetical protein; Provisional

Probab=99.83  E-value=2e-19  Score=145.18  Aligned_cols=144  Identities=19%  Similarity=0.237  Sum_probs=116.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|+++||||++|||.++++.|+++|++|++++|+....+...+++...+..   ..++++|+++.+++.++++++.+
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE---ALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988777776777643322   67789999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhh-ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-------CCeEEEEecCccccCC
Q 023896           83 QFGKLDILTKGDAEVDWSKVC-YQTYELAVECLKTNYYGTKQTCEALIPLLELSD-------SPRLVNLSSYVSALKD  152 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~g~iv~vsS~~~~~~~  152 (275)
                      .||++|++|||||.....+.. +.+.+. ++  .+|+.+++...+.+.++|.+++       .||+..|||......+
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSFHT  164 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccccee
Confidence            999999999999986644333 334334 33  6778888889998888876554       4899999997765543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2.6e-19  Score=159.26  Aligned_cols=190  Identities=21%  Similarity=0.187  Sum_probs=137.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|++|||||+|+||++++++|+++|++|++++|+..........+.... ...++.++.+|+++.+++.++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDG-AKERLKLFKADLLDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccC-CCCceEEEeCCCCCchHHHHHHc------
Confidence            47999999999999999999999999999999998765444322222111 11237888999999998887775      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|++||+||....    ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..+..+.....     .. 
T Consensus        77 -~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~-----~~-  142 (325)
T PLN02989         77 -GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKL-----GP-  142 (325)
T ss_pred             -CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccC-----CC-
Confidence             58999999986432    22445678999999999999999987753   246999999976654321000     00 


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCC------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                          ...+.|..+.      .....|+.+|.+.+.+++.++.++ ++.++.+.|+.+..|..
T Consensus       143 --------------------~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        143 --------------------NDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN-EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             --------------------CCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc-CCeEEEEcCCceeCCCC
Confidence                                0001111111      123579999999999999887765 88899999999988753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.83  E-value=2.8e-19  Score=157.28  Aligned_cols=219  Identities=14%  Similarity=0.068  Sum_probs=148.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH--HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++|++|||||+|+||++++++|+++|++|+++.|+...  .......+...   ..++.++.+|+++.+++.+++.    
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE---EERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC---CCceEEEEecCCCHHHHHHHHc----
Confidence            57899999999999999999999999999999996432  22222332211   1237788999999988766554    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC-CcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~~~  161 (275)
                         .+|.++|.++....      ....+++.+++|+.+++++++++.+.+   ..++||++||..+.... ..+..... 
T Consensus        78 ---~~d~v~~~~~~~~~------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~-  144 (297)
T PLN02583         78 ---GCSGLFCCFDPPSD------YPSYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD-  144 (297)
T ss_pred             ---CCCEEEEeCccCCc------ccccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC-
Confidence               57888886543221      112467899999999999999998754   23699999998765311 00000000 


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCC------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                +.+..|.      .....|+.||...+.++..++... ++++++|+|++|.+|.
T Consensus       145 --------------------------~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-gi~~v~lrp~~v~Gp~  197 (297)
T PLN02583        145 --------------------------VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR-GVNMVSINAGLLMGPS  197 (297)
T ss_pred             --------------------------CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh-CCcEEEEcCCcccCCC
Confidence                                      0111110      112369999999999998887664 8999999999998875


Q ss_pred             cCCC----------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          236 NFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       236 ~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      ....                .....++.++..+..+..+  ...++|++.++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~--~~~~r~~~~~~~  248 (297)
T PLN02583        198 LTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV--SSYGRYLCFNHI  248 (297)
T ss_pred             CCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc--ccCCcEEEecCC
Confidence            3210                1245577777777666533  355678777664

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=1.5e-18  Score=154.30  Aligned_cols=185  Identities=15%  Similarity=0.077  Sum_probs=133.1

Q ss_pred             CCCEEEEecCCCchhHH--HHHHHHHCCCEEEEEecChhHH------------HHHHHHHHhcCCCCCceeEEEecccCh
Q 023896            5 TKKYAVVTGSNKGIGFE--TVRQLASKGITVVLTARDEKRG------------LEAVEKLKASGVDPELLLFHQLDISDL   70 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~--~a~~l~~~g~~vi~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~~Dl~~~   70 (275)
                      .+|++||||+++|||.+  +++.| ++|++++++++...+.            +...+.+...+.   ....+++|+++.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~---~a~~i~~DVss~  115 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGL---YAKSINGDAFSD  115 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCC---ceEEEEcCCCCH
Confidence            36999999999999999  89999 9999988888543221            123333333322   267789999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccch-----------------hh-----------------ccchhHHHHhHHh
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSK-----------------VC-----------------YQTYELAVECLKT  116 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~  116 (275)
                      ++++++++++.+.+|+||+||||+|......                 ..                 ..+.++++.+  +
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--V  193 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--H
Confidence            9999999999999999999999998763322                 00                 1122233333  2


Q ss_pred             hcccH-----HHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhc
Q 023896          117 NYYGT-----KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR  191 (275)
Q Consensus       117 N~~~~-----~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (275)
                      ++.|.     |.-.....+.|.  +++++|-.|++......                                       
T Consensus       194 ~vMggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~---------------------------------------  232 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTH---------------------------------------  232 (398)
T ss_pred             HhhccchHHHHHHHHHhccccc--CCcEEEEEecCCcceee---------------------------------------
Confidence            33333     222444556663  46899999996655432                                       


Q ss_pred             CCCCCC--chhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          192 GWCPHS--SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       192 ~~~~~~--~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                         |.+  ...+.+|++|+..+|+++.++  .++|+|++.+|++.|.-....
T Consensus       233 ---p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~I  281 (398)
T PRK13656        233 ---PIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAI  281 (398)
T ss_pred             ---cccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcC
Confidence               334  477999999999999999999  589999999999999765433

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.81  E-value=1.4e-18  Score=154.33  Aligned_cols=189  Identities=20%  Similarity=0.197  Sum_probs=133.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .++|++|||||+|+||++++++|+++|++|+++.|+....+...+...... ....+.++.+|+++.+++.++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDG-AKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccC-CCCceEEEecCCCCcchHHHHHh-----
Confidence            568999999999999999999999999999999998765443322221111 11237888999999998887776     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc-CCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL-KDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~~~~~~  162 (275)
                        ++|++||+|+.....     ..+...+.+++|+.++.++++++...   .+.++||++||..... +..+.....   
T Consensus        77 --~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~---  143 (322)
T PLN02986         77 --GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEAND---  143 (322)
T ss_pred             --CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCC---
Confidence              589999999864321     12234568899999999999987542   1236999999976542 110000000   


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCC------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                              .+.+..+.      .....|+.||.+.+.+++.+..++ ++.++++.|+.+.+|..
T Consensus       144 ------------------------~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        144 ------------------------VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN-GIDMVVLNPGFICGPLL  198 (322)
T ss_pred             ------------------------CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh-CCeEEEEcccceeCCCC
Confidence                                    01111110      124679999999999999887775 89999999999988753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=1.4e-18  Score=155.64  Aligned_cols=188  Identities=19%  Similarity=0.116  Sum_probs=131.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH-HHHHHHHh-cCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~-~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +.++|++|||||+|+||++++++|+++|++|++++|+..... ...+.+.. .......+.++.+|+++.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            467899999999999999999999999999999998754211 11122211 0011123788899999999998888765


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                           ++|+|||+|+.....    ...+..+..+++|+.++.++++++.+...+.+. -++|++||.. ..+...     
T Consensus        83 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-vyg~~~-----  147 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-MYGSTP-----  147 (340)
T ss_pred             -----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-HhCCCC-----
Confidence                 589999999875432    123455777899999999999999887643211 2788888843 222100     


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCCee
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPGFV  231 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG~v  231 (275)
                                                ..+.+..+..+...|+.||.+.+.+++.++.++     ..+.+|.+.||..
T Consensus       148 --------------------------~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~  198 (340)
T PLN02653        148 --------------------------PPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG  198 (340)
T ss_pred             --------------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence                                      012233344556789999999999999998886     2345566677643

>PLN02650 dihydroflavonol-4-reductase

Probab=99.79  E-value=5.4e-18  Score=152.48  Aligned_cols=194  Identities=19%  Similarity=0.079  Sum_probs=132.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|++|||||+|+||++++++|+++|++|++++|+..........+. ......++.++.+|+++.+.+.++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD-LPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHh-ccCCCCceEEEEecCCChhhHHHHHh------
Confidence            56899999999999999999999999999999998765544332221 11111237788999999988777765      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       .+|++||+|+.....     ..+.+++.+++|+.+++++++++.+..   ..++||++||.....+..+...  .+.+.
T Consensus        77 -~~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~--~~~E~  145 (351)
T PLN02650         77 -GCTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKP--VYDED  145 (351)
T ss_pred             -CCCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCC--ccCcc
Confidence             589999999754321     123346789999999999999987642   1358999999643322100000  00000


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      .+.. .+                ... ....+...|+.||.+.+.+++.++.++ +++++.+.|+.+.+|.
T Consensus       146 ~~~~-~~----------------~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~Gp~  197 (351)
T PLN02650        146 CWSD-LD----------------FCR-RKKMTGWMYFVSKTLAEKAAWKYAAEN-GLDFISIIPTLVVGPF  197 (351)
T ss_pred             cCCc-hh----------------hhh-ccccccchHHHHHHHHHHHHHHHHHHc-CCeEEEECCCceECCC
Confidence            0000 00                000 011233579999999999999998774 8999999999998875

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.78  E-value=1.3e-17  Score=149.31  Aligned_cols=196  Identities=17%  Similarity=0.149  Sum_probs=130.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.++++|||||+|+||++++++|+++|++|++++|+......... +..... ...+.++.+|+++.+++.++++     
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQE-LGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCC-CCceEEEEcCCCChHHHHHHHh-----
Confidence            468999999999999999999999999999999888654332211 111111 0127788999999988777664     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+|+....     ...+.+.+.+++|+.++.++++++...   .+.+++|++||.+.......+....    
T Consensus        80 --~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~----  145 (338)
T PLN00198         80 --GCDLVFHVATPVNF-----ASEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGL----  145 (338)
T ss_pred             --cCCEEEEeCCCCcc-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCc----
Confidence              68999999985321     122345567899999999999998653   1346999999976442110000000    


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                        ..+++       .|..   .....+  ..++...|+.||.+.+.+++.++.++ ++.+..+.|+.|..|.
T Consensus       146 --~~~E~-------~~~~---~~~~~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        146 --VMNEK-------NWTD---VEFLTS--EKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGPS  202 (338)
T ss_pred             --eeccc-------cCCc---hhhhhh--cCCccchhHHHHHHHHHHHHHHHHhc-CceEEEEeCCceECCC
Confidence              00000       0000   000001  11346679999999999999988774 7889999999887774

>PLN02240 UDP-glucose 4-epimerase

Probab=99.78  E-value=1e-17  Score=150.51  Aligned_cols=183  Identities=20%  Similarity=0.174  Sum_probs=127.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcC-CCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||+|+||++++++|+++|++|++.+|.........+.+.... .....+.++.+|+++.+++.+++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            45678999999999999999999999999999999875432222222222111 01112778899999999988887643


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           ++|+|||+|+.....    .+.+.+.+.+++|+.++.++++++..    .+.+++|++||.. ..+..       
T Consensus        81 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~-vyg~~-------  139 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSAT-VYGQP-------  139 (352)
T ss_pred             -----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHH-HhCCC-------
Confidence                 799999999864321    23456778999999999999987632    3446899999953 22210       


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCP  228 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~p  228 (275)
                                             ....+.+..+..+...|+.+|.+.+.+++.++....++++..+.+
T Consensus       140 -----------------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~  184 (352)
T PLN02240        140 -----------------------EEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRY  184 (352)
T ss_pred             -----------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence                                   011133334445567899999999999999887644555555443

>PLN02214 cinnamoyl-CoA reductase

Probab=99.78  E-value=1.1e-17  Score=149.97  Aligned_cols=182  Identities=20%  Similarity=0.149  Sum_probs=131.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH-HHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ..++|++|||||+|+||++++++|+++|++|++++|+...... ..+.+...   ..++.++.+|+++.+++.++++   
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~---   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---KERLILCKADLQDYEALKAAID---   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---CCcEEEEecCcCChHHHHHHHh---
Confidence            3567899999999999999999999999999999998764322 12222211   1237788899999998877765   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+|+...         +.+.+.+++|+.++.++++++..    .+.++||++||..+..+........  
T Consensus        81 ----~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~--  141 (342)
T PLN02214         81 ----GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEA--  141 (342)
T ss_pred             ----cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCc--
Confidence                5899999998531         24567899999999999999864    3346999999976554321000000  


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcC------CCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRG------WCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                          .                     +++..      +..+...|+.||.+.+.+++.++.++ ++++..+.|+.|..|.
T Consensus       142 ----~---------------------~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        142 ----V---------------------VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK-GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             ----c---------------------cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCC
Confidence                0                     11111      11234679999999999999988775 8889999999887764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.77  E-value=2.4e-17  Score=148.39  Aligned_cols=198  Identities=20%  Similarity=0.145  Sum_probs=133.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..++++|||||+|+||++++++|+++|++|++++|+..........+.. .   .++.++.+|+++.+++.++++     
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-G---DRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-C---CeEEEEECCCCCHHHHHHHHc-----
Confidence            3578999999999999999999999999999999987665554444322 1   237889999999988777764     


Q ss_pred             cCCccEEEcCCcccccch-hhccchhHH--HHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           84 FGKLDILTKGDAEVDWSK-VCYQTYELA--VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                        .+|+|||+|+...... ....+++.+  ...+++|+.++.++++++.+..   ..+++|++||....... +..    
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~-~~~----  148 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAK-DSN----  148 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhcccc-ccC----
Confidence              5899999998754321 112233333  4567788899999999986542   23699999997544221 000    


Q ss_pred             hccc-cchhHHHHHHHHHHhhhhhchhhhhh-cCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          161 LGDV-ENLTEERIEMVVKDYFKDYEEGEIAN-RGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                       .++ ...+++..             ..... ....++...|+.||.+.+.+++.++.++ ++++.++.|+.|..|.
T Consensus       149 -~~~~~~~~E~~~-------------~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        149 -GRWRAVVDETCQ-------------TPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN-GIDLVSVITTTVAGPF  210 (353)
T ss_pred             -CCCCCccCcccC-------------CcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCC
Confidence             000 00000000             00000 0011234579999999999999988775 8899999998877764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.76  E-value=3.2e-17  Score=151.62  Aligned_cols=200  Identities=18%  Similarity=0.073  Sum_probs=132.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH----------------HHHHHHHHhcCCCCCceeEEEec
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG----------------LEAVEKLKASGVDPELLLFHQLD   66 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~D   66 (275)
                      .+++|++|||||+|+||++++++|+++|++|++++|...+.                ...++.+.....  ..+.++.+|
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~v~~v~~D  121 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSG--KEIELYVGD  121 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhC--CcceEEECC
Confidence            45789999999999999999999999999999987532110                001111111111  127889999


Q ss_pred             ccChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           67 ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        67 l~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                      +++.+.+.+++++.     ++|+|||+|+... .+....++++++..+++|+.|++++++++...-   ...++|++||.
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~~SS~  192 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVKLGTM  192 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEEEecc
Confidence            99999988888754     6899999986532 233344556678889999999999999886531   12489999996


Q ss_pred             ccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhc---CCCCCCchhhHhHHHHHHHHHHHHHhCCCeEE
Q 023896          147 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR---GWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  223 (275)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~v  223 (275)
                      ........+.     . ..+.+.               .....+.   .+..+...|+.||.+.+.+++.++..+ ++.+
T Consensus       193 ~vYG~~~~~~-----~-E~~i~~---------------~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~-gl~~  250 (442)
T PLN02572        193 GEYGTPNIDI-----E-EGYITI---------------THNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRA  250 (442)
T ss_pred             eecCCCCCCC-----c-cccccc---------------ccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc-CCCE
Confidence            5331110000     0 000000               0000000   122345689999999999999887764 7888


Q ss_pred             EeecCCeeecCC
Q 023896          224 NCVCPGFVKTDI  235 (275)
Q Consensus       224 n~v~pG~v~T~~  235 (275)
                      ..+.|+.+..+.
T Consensus       251 v~lR~~~vyGp~  262 (442)
T PLN02572        251 TDLNQGVVYGVR  262 (442)
T ss_pred             EEEecccccCCC
Confidence            888888886654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=1.8e-17  Score=148.64  Aligned_cols=182  Identities=19%  Similarity=0.122  Sum_probs=123.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH-HHHHHHHHhc--CCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKAS--GVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~-~~~~~~l~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|||||+|+||++++++|+++|++|++++|+.... ....+.+...  ......+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999876421 0111111110  000123788999999999988888754   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+|+......    ..+.-...+++|+.|+.++++++.+.-.+ +..++|++||..-. +..          
T Consensus        78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vy-g~~----------  139 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELY-GKV----------  139 (343)
T ss_pred             --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhh-CCC----------
Confidence              5899999998754321    22233567789999999999998763111 12389999995422 210          


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--C---CeEEEeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P---KFCVNCVCPG  229 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~---~i~vn~v~pG  229 (275)
                                          ....+.+..+..+...|+.||.+.+.+++.++.++  +   .+.+|.+.|+
T Consensus       140 --------------------~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       140 --------------------QEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             --------------------CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence                                00012333344567789999999999999998775  1   2334556665

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.75  E-value=3.9e-17  Score=147.00  Aligned_cols=185  Identities=19%  Similarity=0.151  Sum_probs=123.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEE-EEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVV-LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      |++|||||+|+||+++++.|+++|++++ +.+|..... .. ..+.... ....+.++.+|+++.+++++++++.     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-NL-MSLAPVA-QSERFAFEKVDICDRAELARVFTEH-----   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-ch-hhhhhcc-cCCceEEEECCCcChHHHHHHHhhc-----
Confidence            5799999999999999999999998755 455543211 11 1111110 0112677899999999988887742     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh---c--CCCCeEEEEecCccccCCCcHHHHhh
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE---L--SDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~---~--~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++|+|||+||....    ..+.+.+++.+++|+.+++++++++.+.+.   .  .+..++|++||.... +....     
T Consensus        74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vy-g~~~~-----  143 (355)
T PRK10217         74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVY-GDLHS-----  143 (355)
T ss_pred             CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhc-CCCCC-----
Confidence            69999999986532    123456789999999999999999987532   1  123589999995422 11000     


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                             ....+.+..+..+...|+.||.+.+.+++.++.++ ++++..+.|+.+..
T Consensus       144 -----------------------~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~G  192 (355)
T PRK10217        144 -----------------------TDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY-GLPTLITNCSNNYG  192 (355)
T ss_pred             -----------------------CCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCeEEEeeeeeeC
Confidence                                   00012233333456789999999999999998775 44555555554443

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=6.5e-17  Score=143.47  Aligned_cols=187  Identities=20%  Similarity=0.169  Sum_probs=129.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|++|||||+|+||++++++|+++|++|++++|+....... ..+........++.++.+|+++.+++.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            578999999999999999999999999999999987643322 1222111111237889999999988777765      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHHhhhcc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKARAVLGD  163 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~~~  163 (275)
                       ++|+|||+|+.....     ..+...+.+++|+.++.++++++....   +..++|++||..+. .+..+...     +
T Consensus        76 -~~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~-----~  141 (322)
T PLN02662         76 -GCEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTP-----D  141 (322)
T ss_pred             -CCCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCC-----C
Confidence             689999999864321     112235788999999999999986532   33599999996542 11100000     0


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCC------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                       ..                     +.+..+.      .....|+.+|.+.+.+++.+..++ ++++..+.|+.+.+|.
T Consensus       142 -~~---------------------~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lRp~~v~Gp~  196 (322)
T PLN02662        142 -VV---------------------VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN-GIDMVTINPAMVIGPL  196 (322)
T ss_pred             -Cc---------------------CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCcccCCC
Confidence             00                     0111100      112479999999999999887764 8899999999998875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.9e-16  Score=145.12  Aligned_cols=172  Identities=23%  Similarity=0.150  Sum_probs=143.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+.||++|||||+|.||+++++++++.+. ++++.+|++-+.....++++.... ...+.++-+|++|.+.+.+++++. 
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcC-
Confidence            46899999999999999999999999986 799999999999888888887644 234888889999999999988854 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+++|+|+.-+.+-    -.....+.+++|++|+.++++++..    ++-.++|++|+--+..           
T Consensus       325 ----kvd~VfHAAA~KHVPl----~E~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~-----------  381 (588)
T COG1086         325 ----KVDIVFHAAALKHVPL----VEYNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVN-----------  381 (588)
T ss_pred             ----CCceEEEhhhhccCcc----hhcCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccC-----------
Confidence                7999999998755432    2345667899999999999999865    4557999999966654           


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC--CeEEEeecCCeeec
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKT  233 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--~i~vn~v~pG~v~T  233 (275)
                                                        +...||++|+..+.++.+++....  +.++.+|.-|.|-.
T Consensus       382 ----------------------------------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         382 ----------------------------------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             ----------------------------------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence                                              457899999999999999988764  58888888886644

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.73  E-value=2.7e-16  Score=140.49  Aligned_cols=178  Identities=19%  Similarity=0.118  Sum_probs=122.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++++|..+........+......  ++.++.+|+++.+++.++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCC--CceEEEccCCCHHHHHHHHhc-----CCC
Confidence            6999999999999999999999999999887543332222222222111  266788999999988887753     369


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+|+......    ..+...+.+++|+.++.++++++.    +++.+++|++||.... +..+             
T Consensus        75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~y-g~~~-------------  132 (338)
T PRK10675         75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSATVY-GDQP-------------  132 (338)
T ss_pred             CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhh-CCCC-------------
Confidence            99999998654321    223455788999999999988764    3445689999995432 1100             


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV  231 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v  231 (275)
                                       ...+.+..+. .+...|+.+|.+.+.+++.++.+..++++..+.|+.+
T Consensus       133 -----------------~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v  180 (338)
T PRK10675        133 -----------------KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP  180 (338)
T ss_pred             -----------------CCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeee
Confidence                             0012222221 2357899999999999999987765666666655444

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.71  E-value=4.7e-16  Score=139.83  Aligned_cols=184  Identities=16%  Similarity=0.078  Sum_probs=127.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcC--CCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG--VDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|+||||||+|.||++++++|+++|++|++++|...........+....  ....++.++.+|+.+.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            356899999999999999999999999999999986543222222221110  011237788999999888766665   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          .+|+|||.|+..... .   ..++..+.+++|+.|+.++++++..    .+..++|++||....... +       
T Consensus        90 ----~~d~ViHlAa~~~~~-~---~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~-~-------  149 (348)
T PRK15181         90 ----NVDYVLHQAALGSVP-R---SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDH-P-------  149 (348)
T ss_pred             ----CCCEEEECccccCch-h---hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCC-C-------
Confidence                589999999864321 1   2233456799999999999998743    344699999995432111 0       


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                             .....+..+..+...|+.+|.+.+.+++.++..+ ++++..+.|+.+..|
T Consensus       150 -----------------------~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~vyGp  198 (348)
T PRK15181        150 -----------------------DLPKIEERIGRPLSPYAVTKYVNELYADVFARSY-EFNAIGLRYFNVFGR  198 (348)
T ss_pred             -----------------------CCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCc
Confidence                                   0001111222345689999999999999887664 788888888877665

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=1.1e-16  Score=135.71  Aligned_cols=177  Identities=24%  Similarity=0.176  Sum_probs=129.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHH-HHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|||||+|+||+++++.++.+..  +|+..+.-.-.. .+.+..+..    ..+..+++.|+.|.+.+.+++++-   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~----~~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED----SPRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc----CCCceEEeccccCHHHHHHHHHhc---
Confidence            4689999999999999999998754  467666422110 111122221    123899999999999988888754   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+++|-|+-...    +.+.++....+++|++|++.|++++..+..+   -|++-||.-            +.+++
T Consensus        74 --~~D~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTD------------EVYG~  132 (340)
T COG1088          74 --QPDAVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTD------------EVYGD  132 (340)
T ss_pred             --CCCeEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccc------------ccccc
Confidence              79999999876654    4577788888999999999999999776521   389999982            22222


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPG  229 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG  229 (275)
                      ++.-                 +..|.|..++.++++|++||++..+++|++.+.| |+.++...+.
T Consensus       133 l~~~-----------------~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY-glp~~ItrcS  180 (340)
T COG1088         133 LGLD-----------------DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY-GLPATITRCS  180 (340)
T ss_pred             ccCC-----------------CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc-CCceEEecCC
Confidence            2111                 1147788899999999999999999999999997 5544444443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=6.4e-16  Score=131.59  Aligned_cols=161  Identities=23%  Similarity=0.226  Sum_probs=126.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|-||++++.+|++.|++|++.+...-.-...+....        ..+++.|+.|.+.+.+++++-     +
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--------~~f~~gDi~D~~~L~~vf~~~-----~   67 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLLDRALLTAVFEEN-----K   67 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--------CceEEeccccHHHHHHHHHhc-----C
Confidence            479999999999999999999999999999975543333333221        468899999999988888765     8


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      ||.+||.||....+    ++.+.--+.++.|+.|+..|++++..    .+-..|||.|| ++..+.              
T Consensus        68 idaViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~----~gv~~~vFSSt-AavYG~--------------  124 (329)
T COG1087          68 IDAVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQ----TGVKKFIFSST-AAVYGE--------------  124 (329)
T ss_pred             CCEEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHH----hCCCEEEEecc-hhhcCC--------------
Confidence            99999999875543    46677778899999999999998754    45568888777 444332              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  219 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~  219 (275)
                                      +..-++.|..+..+..+|+.||...|.+.+.+++.++
T Consensus       125 ----------------p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         125 ----------------PTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             ----------------CCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence                            2223467777777889999999999999999988874

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.70  E-value=7.4e-16  Score=135.88  Aligned_cols=180  Identities=21%  Similarity=0.114  Sum_probs=126.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +++||||+|+||.+++++|+++|  ++|++.+|... ......+.+..  .  .++.++.+|+++++++.++++..    
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~Dl~~~~~~~~~~~~~----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--N--PRYRFVKGDIGDRELVSRLFTEH----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--C--CCcEEEEcCCcCHHHHHHHHhhc----
Confidence            48999999999999999999987  78888876432 11111122211  1  13778899999999988887743    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+|+.....    .+.+..+..+++|+.++..+++++...+.   ..++|++||....... ..         
T Consensus        73 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~-~~---------  134 (317)
T TIGR01181        73 -QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDL-EK---------  134 (317)
T ss_pred             -CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCC-CC---------
Confidence             599999999865432    23456678899999999999998866432   3489999995432111 00         


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                          ...+.+..+..+...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+
T Consensus       135 --------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~i~G~  183 (317)
T TIGR01181       135 --------------------GDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY-GLPALITRCSNNYGP  183 (317)
T ss_pred             --------------------CCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEeccccCC
Confidence                                0012223333456789999999999999987774 777788888877654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.69  E-value=1.2e-15  Score=138.09  Aligned_cols=196  Identities=14%  Similarity=0.136  Sum_probs=129.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC---CCCceeEEEecccChHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV---DPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      .+++|++|||||+|+||++++++|+++|++|+++.|+.+..+.. +.+...+.   ....+.++.+|+++.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            46789999999999999999999999999999999987654443 23321110   00127788999999999888776 


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc-ccCCC-cHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDL-PEKA  157 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~-~~~~  157 (275)
                            .+|.++|.|+........    .......++|+.++.++++++...   .+-.++|++||..+ ..+.. +...
T Consensus       128 ------~~d~V~hlA~~~~~~~~~----~~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLS----GYTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             ------hccEEEecCeeecccccc----cccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCC
Confidence                  468899988765332110    111345678999999999987542   12358999999642 22110 0000


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      ....+...+                     ..+..+..+...|+.||.+.+.+++.++.++ +++++++.|+.|.+|.
T Consensus       195 ~~~i~E~~~---------------------~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        195 PPVIDEESW---------------------SDESFCRDNKLWYALGKLKAEKAAWRAARGK-GLKLATICPALVTGPG  250 (367)
T ss_pred             CcccCCCCC---------------------CChhhcccccchHHHHHHHHHHHHHHHHHhc-CceEEEEcCCceECCC
Confidence            000000000                     0000111234579999999999999888774 8999999999998884

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.69  E-value=8.5e-16  Score=136.05  Aligned_cols=179  Identities=20%  Similarity=0.129  Sum_probs=127.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++.+|...........+....    .+..+.+|+++.+++.++++.     +++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~-----~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT----RVTFVEGDLRDRELLDRLFEE-----HKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc----ceEEEECCCCCHHHHHHHHHh-----CCC
Confidence            47999999999999999999999999988765433222222222111    277788999999998888763     379


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++||+||.....    ...+...+.+.+|+.++..+++++..    .+.+++|++||.... +..              
T Consensus        72 d~vv~~ag~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~-g~~--------------  128 (328)
T TIGR01179        72 DAVIHFAGLIAVG----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVY-GEP--------------  128 (328)
T ss_pred             cEEEECccccCcc----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhc-CCC--------------
Confidence            9999999865332    13345567889999999999987643    344689999985432 110              


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                      ....+.+..+..+...|+.+|++++.+++.++.+..++++..+.|+.+..+
T Consensus       129 ----------------~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       129 ----------------SSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGA  179 (328)
T ss_pred             ----------------CCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCC
Confidence                            000122223334567899999999999999987756888888888766554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.68  E-value=3.4e-16  Score=134.88  Aligned_cols=166  Identities=24%  Similarity=0.224  Sum_probs=118.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCC-CCc--eeEEEecccChHHHHHHHHHHHhhc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVD-PEL--LLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~-~~~--~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ||||||+|.||++++++|++.+. +|++.+|++.++-...+++...... ..+  +..+.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999984 8999999999998888887543322 111  234567999999888877655    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+++|.|+.-+.... +   +...+.+++|++|+.++++++..+    +-.++|++|+--+.               
T Consensus        77 -~pdiVfHaAA~KhVpl~-E---~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv---------------  132 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLM-E---DNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAV---------------  132 (293)
T ss_dssp             -T-SEEEE------HHHH-C---CCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCS---------------
T ss_pred             -CCCEEEEChhcCCCChH-H---hCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccC---------------
Confidence             79999999987554322 2   355778999999999999998763    45699999996554               


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                    .+...||+||...+.++...+...  .+.++.+|.-|.|-
T Consensus       133 ------------------------------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVl  172 (293)
T PF02719_consen  133 ------------------------------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVL  172 (293)
T ss_dssp             ------------------------------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EET
T ss_pred             ------------------------------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeccee
Confidence                                          345899999999999999998887  56788888877664

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.68  E-value=1.5e-15  Score=136.46  Aligned_cols=189  Identities=18%  Similarity=0.079  Sum_probs=120.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCE-EEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|||||+|+||++++++|+++|+. |+..++...  ..+.. ..+.   . ...+.++.+|+++.+++.+++++.    
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS---D-SERYVFEHADICDRAELDRIFAQH----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc---c-CCceEEEEecCCCHHHHHHHHHhc----
Confidence            5999999999999999999999986 554554321  11111 1111   1 122677899999999988888753    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-----CCCeEEEEecCccccCCCcHHHHh
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                       ++|++||+|+.....    ...+..++.+++|+.+++++++++.+.|...     +..++|++||.........+....
T Consensus        73 -~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (352)
T PRK10084         73 -QPDAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVE  147 (352)
T ss_pred             -CCCEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccc
Confidence             799999999864321    1223456789999999999999998765321     224899999964331110000000


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                      ...+.                     ..+.+..+..+...|+.+|.+.+.+++.++.++ ++.+..+.|+.|.
T Consensus       148 ~~~~~---------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~vilr~~~v~  198 (352)
T PRK10084        148 NSEEL---------------------PLFTETTAYAPSSPYSASKASSDHLVRAWLRTY-GLPTIVTNCSNNY  198 (352)
T ss_pred             ccccC---------------------CCccccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEecccee
Confidence            00000                     001222333456789999999999999998775 3444444444443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.65  E-value=7.4e-15  Score=126.06  Aligned_cols=193  Identities=21%  Similarity=0.210  Sum_probs=122.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..++++|||||+|+||++++++|+++|++|++..|+..+......    ..   ..+.++++|+++..  ..+.+.+.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~---~~~~~~~~Dl~d~~--~~l~~~~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QD---PSLQIVRADVTEGS--DKLVEAIG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cC---CceEEEEeeCCCCH--HHHHHHhh--
Confidence            457899999999999999999999999999999999876433211    11   13788999999742  12222220  


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                       .++|++|+++|......    .    ...+++|+.++.++++++.    +.+.++||++||+.......          
T Consensus        84 -~~~d~vi~~~g~~~~~~----~----~~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~----------  140 (251)
T PLN00141         84 -DDSDAVICATGFRRSFD----P----FAPWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAM----------  140 (251)
T ss_pred             -cCCCEEEECCCCCcCCC----C----CCceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCc----------
Confidence             27999999988632110    1    1224678889999888874    34557999999975321100          


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHH-HHHHHHhC---CCeEEEeecCCeeecCCcCC-
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY-TRILAKRY---PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~~a~~~---~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                   ..+....|...|.....+ .+..+.++   .+++++.|.||++.++.... 
T Consensus       141 -----------------------------~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~  191 (251)
T PLN00141        141 -----------------------------GQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGN  191 (251)
T ss_pred             -----------------------------ccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCce
Confidence                                         001122344444332222 12112111   48999999999997664211 


Q ss_pred             ----------CCCCChhhhhccceeecccCC
Q 023896          239 ----------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ----------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                                ....++++.++.++..+..+.
T Consensus       192 ~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        192 IVMEPEDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             EEECCCCccccCcccHHHHHHHHHHHhcChh
Confidence                      124688888888877766544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.63  E-value=5.6e-15  Score=131.07  Aligned_cols=171  Identities=20%  Similarity=0.078  Sum_probs=123.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++++||||+|+||+.+++.|+++|++|++++|+......    +..     ..+.++.+|+++.+++.++++       .
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-----~~~~~~~~D~~~~~~l~~~~~-------~   64 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LEG-----LDVEIVEGDLRDPASLRKAVA-------G   64 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----ccc-----CCceEEEeeCCCHHHHHHHHh-------C
Confidence            369999999999999999999999999999998754321    111     127788999999998877765       6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|++||+|+....      ..+.+++.+++|+.++.++++++..    .+.+++|++||.........            
T Consensus        65 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~------------  122 (328)
T TIGR03466        65 CRALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGD------------  122 (328)
T ss_pred             CCEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCC------------
Confidence            8999999975321      2234677899999999999998754    33469999999765432100            


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCC---CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWC---PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                        ...+.+..+.   .....|+.+|.+.+.+++.++.++ ++.+..+.|+.+..+
T Consensus       123 ------------------~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       123 ------------------GTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK-GLPVVIVNPSTPIGP  174 (328)
T ss_pred             ------------------CCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc-CCCEEEEeCCccCCC
Confidence                              0001111111   124579999999999999987764 778888888877554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.63  E-value=1.4e-14  Score=122.50  Aligned_cols=174  Identities=25%  Similarity=0.250  Sum_probs=133.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      ||||||+|.||.+++++|+++|+.|+...|............        .+.++.+|+.+.+.++++++..     .+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~dl~~~~~~~~~~~~~-----~~d   67 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--------NVEFVIGDLTDKEQLEKLLEKA-----NID   67 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--------TEEEEESETTSHHHHHHHHHHH-----TES
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--------eEEEEEeecccccccccccccc-----Cce
Confidence            799999999999999999999999998887776433222211        2889999999999999998866     799


Q ss_pred             EEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchh
Q 023896           89 ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT  168 (275)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  168 (275)
                      .++|.|+... .+   ...+...+.++.|+.++.++++++..    .+..++|++||.. ..+..               
T Consensus        68 ~vi~~a~~~~-~~---~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~-~y~~~---------------  123 (236)
T PF01370_consen   68 VVIHLAAFSS-NP---ESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSAS-VYGDP---------------  123 (236)
T ss_dssp             EEEEEBSSSS-HH---HHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGG-GGTSS---------------
T ss_pred             EEEEeecccc-cc---cccccccccccccccccccccccccc----ccccccccccccc-ccccc---------------
Confidence            9999998754 11   23367778889999999999998865    2336999999943 32221               


Q ss_pred             HHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                     ....+.+..+..+...|+.+|...+.+++.+...+ ++++..+.|+.+..+.
T Consensus       124 ---------------~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  124 ---------------DGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY-GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             ---------------SSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH-TSEEEEEEESEEESTT
T ss_pred             ---------------ccccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence                           01112333333456779999999999999998875 8999999999998877

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.62  E-value=7.6e-15  Score=128.00  Aligned_cols=177  Identities=22%  Similarity=0.183  Sum_probs=125.9

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896           10 VVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      |||||+|.||++++++|+++|  ++|.+.++.......  ..+....    ...++.+|+++.+++.++++       .+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~~----~~~~~~~Di~d~~~l~~a~~-------g~   67 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKSG----VKEYIQGDITDPESLEEALE-------GV   67 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhccc----ceeEEEeccccHHHHHHHhc-------CC
Confidence            699999999999999999999  688888877654221  1111111    13488999999999888887       68


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|+|.|+.....     .....++++++|+.|+-++++++..    .+-.++|++||............  ..+     
T Consensus        68 d~V~H~Aa~~~~~-----~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~--~~~-----  131 (280)
T PF01073_consen   68 DVVFHTAAPVPPW-----GDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDP--IIN-----  131 (280)
T ss_pred             ceEEEeCcccccc-----CcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCC--ccc-----
Confidence            9999999875432     2345778999999999999998864    34569999999887654211000  000     


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcC--CCCCCchhhHhHHHHHHHHHHHHH---hC-CCeEEEeecCCeeecCC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRG--WCPHSSAYKVSKAVINAYTRILAK---RY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~~a~---~~-~~i~vn~v~pG~v~T~~  235 (275)
                                          ..+..  +......|+.||+..|.++.....   +. ++.+..+|.|..|..|.
T Consensus       132 --------------------~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~  185 (280)
T PF01073_consen  132 --------------------GDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG  185 (280)
T ss_pred             --------------------CCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence                                00111  113566899999999999987655   11 35777889999887763

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.61  E-value=2.7e-14  Score=130.16  Aligned_cols=202  Identities=12%  Similarity=0.047  Sum_probs=122.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.++||||||+|.||+.++++|+++ |++|++++|+..+....... ... ....++.++.+|+++.+.+.++++     
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~~-~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DTV-PWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-ccc-cCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            4568999999999999999999998 59999999876543322111 000 011238889999999988777665     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        .+|+|||.|+........    +.-.+.+..|+.++.++++++..    .+ .++|++||.... +.... .....+.
T Consensus        86 --~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vY-g~~~~-~~~~e~~  152 (386)
T PLN02427         86 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVY-GKTIG-SFLPKDH  152 (386)
T ss_pred             --cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeee-CCCcC-CCCCccc
Confidence              479999999865432211    12234466899999999988743    23 589999996532 21100 0000000


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCC-CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      +  ...      ...++...+........+ ..+...|+.+|.+.+.+++.++.. .++.+..+.|+.|..+.
T Consensus       153 p--~~~------~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        153 P--LRQ------DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             c--ccc------ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh-cCCceEEecccceeCCC
Confidence            0  000      000000000000000000 012357999999999999887655 47888888888887653

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.61  E-value=1.7e-14  Score=124.07  Aligned_cols=170  Identities=21%  Similarity=0.197  Sum_probs=126.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++||||||+|.||++.+.+|.++|+.|++++.-........+.++........+.+...|++|...+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            578999999999999999999999999999986444433333444433332345999999999999999999877     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|.|+|-|+.....    .+.+......+.|+.|+.++++.+..    .+-..+||.||.. ..+..            
T Consensus        77 ~fd~V~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssat-vYG~p------------  135 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSAT-VYGLP------------  135 (343)
T ss_pred             CCceEEeehhhhccc----hhhhCchhheehhhhhHHHHHHHHHH----cCCceEEEeccee-eecCc------------
Confidence            699999998764432    23444477889999999999988754    3456889988844 32220            


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCC-CCchhhHhHHHHHHHHHHHHHhCC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRYP  219 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~~a~~~~  219 (275)
                                        ..-++++..+.. +...|+.+|-+++.+.+.+..-++
T Consensus       136 ------------------~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  136 ------------------TKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             ------------------ceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence                              011244554444 678999999999999999887764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.59  E-value=7.9e-14  Score=125.23  Aligned_cols=184  Identities=19%  Similarity=0.166  Sum_probs=120.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHH---HHHHHHHHhcCC---C-C-CceeEEEecccChHH---HH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRG---LEAVEKLKASGV---D-P-ELLLFHQLDISDLAS---VS   74 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~---~~~~~~l~~~~~---~-~-~~~~~~~~Dl~~~~~---v~   74 (275)
                      +||||||+|+||++++++|+++|  ++|++..|+....   +...+.+.....   . . .++.++.+|++++..   ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  6799999976532   122222221110   0 0 248889999986531   11


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      . .+.+   ...+|++||+|+...+.       ..+++.+++|+.++..+++.+..    .+..+++++||.........
T Consensus        81 ~-~~~~---~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~~~  145 (367)
T TIGR01746        81 E-WERL---AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAAIDL  145 (367)
T ss_pred             H-HHHH---HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCCcCC
Confidence            1 1112   13799999999875432       24567788999999999988754    23346999999765432100


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                      ..          ..+               +.... .........|+.+|.+.+.+++.++..  +++++.+.||.+.++
T Consensus       146 ~~----------~~~---------------~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       146 ST----------VTE---------------DDAIV-TPPPGLAGGYAQSKWVAELLVREASDR--GLPVTIVRPGRILGN  197 (367)
T ss_pred             CC----------ccc---------------ccccc-ccccccCCChHHHHHHHHHHHHHHHhc--CCCEEEECCCceeec
Confidence            00          000               00000 001123457999999999999876554  899999999999865

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.58  E-value=3e-14  Score=125.79  Aligned_cols=170  Identities=21%  Similarity=0.188  Sum_probs=112.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh--hcCC
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--QFGK   86 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~g~   86 (275)
                      ||||||+|.||++++++|+++|++++++.|+....... .            ....+|+.|..+.+.+++.+.+  .+++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V------------NLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H------------hhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            79999999999999999999999777666554321110 0            1123566666555555554432  3468


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||.|+......   .   +....++.|+.++.++++++..    .+ .++|++||........             
T Consensus        69 ~d~Vih~A~~~~~~~---~---~~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~-------------  124 (308)
T PRK11150         69 IEAIFHEGACSSTTE---W---DGKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRT-------------  124 (308)
T ss_pred             ccEEEECceecCCcC---C---ChHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCC-------------
Confidence            999999998543221   1   1235689999999999998754    33 3799999964321110             


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                        .....+..+..+...|+.+|.+.+.+++.++.+ .++.+..+.|+.+..+
T Consensus       125 ------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~vyG~  173 (308)
T PRK11150        125 ------------------DDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE-ANSQICGFRYFNVYGP  173 (308)
T ss_pred             ------------------CCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCEEEEeeeeecCC
Confidence                              000122223344578999999999999988766 3677777777776654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.55  E-value=9.1e-14  Score=126.00  Aligned_cols=180  Identities=12%  Similarity=0.047  Sum_probs=120.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++++||||||+|.||++++++|.++|++|++++|.....      +....   ....++.+|+++.+.+.++++      
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~---~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDM---FCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccccc---ccceEEECCCCCHHHHHHHHh------
Confidence            578999999999999999999999999999999864321      00000   014567789999887666553      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||.|+........   .......+..|+.++.++++++..    .+..++|++||.... +.....     .  
T Consensus        85 -~~D~Vih~Aa~~~~~~~~---~~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vY-g~~~~~-----~--  148 (370)
T PLN02695         85 -GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIY-PEFKQL-----E--  148 (370)
T ss_pred             -CCCEEEEcccccCCcccc---ccCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhc-CCcccc-----C--
Confidence             689999999754322111   112344577899999999998753    344599999995432 210000     0  


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhc--CCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANR--GWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                         ....+.+.  .+..+...|+.+|.+.+.+++.++..+ ++++..+.|+.+..|.
T Consensus       149 -------------------~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        149 -------------------TNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF-GIECRIGRFHNIYGPF  201 (370)
T ss_pred             -------------------cCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEECCccCCC
Confidence                               00001111  122456789999999999999887664 7778888888777653

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.55  E-value=8.3e-14  Score=135.18  Aligned_cols=174  Identities=11%  Similarity=0.004  Sum_probs=120.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~   82 (275)
                      ++++||||||+|.||++++++|+++ |++|+.++|+......    +..  .  ..+.++.+|+++..+ ++++++    
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~--~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG--H--PRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC--C--CceEEEeccccCcHHHHHHHhc----
Confidence            4688999999999999999999986 7999999997743221    111  1  127788899998665 333332    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         ++|+|||.|+......    ..+...+.+++|+.++.++++++..    .+ .++|++||.... +...        
T Consensus       382 ---~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vy-g~~~--------  440 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVY-GMCT--------  440 (660)
T ss_pred             ---CCCEEEECccccCchh----hccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhc-CCCC--------
Confidence               6899999998654321    1223346789999999999999864    33 589999995432 2100        


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcC------CC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRG------WC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                            ...+.+..      +. .+...|+.||.+.+.+++.++..+ ++++..+.|+.+..|
T Consensus       441 ----------------------~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp  496 (660)
T PRK08125        441 ----------------------DKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE-GLRFTLFRPFNWMGP  496 (660)
T ss_pred             ----------------------CCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc-CCceEEEEEceeeCC
Confidence                                  00011111      10 234579999999999999987775 677777888777654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.55  E-value=1.3e-13  Score=123.85  Aligned_cols=178  Identities=13%  Similarity=0.061  Sum_probs=114.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc-ChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~   84 (275)
                      ++||||||+|.||+.++++|+++ |++|++++|+......    +...    ..+.++.+|++ +.+.+.++++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~~----~~~~~~~~Dl~~~~~~~~~~~~------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVNH----PRMHFFEGDITINKEWIEYHVK------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hccC----CCeEEEeCCCCCCHHHHHHHHc------
Confidence            36999999999999999999986 6999999987643221    1111    12778889998 5555444433      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||.|+......    ..++....+++|+.++.++++++..    .+ .++|++||.... +.....        
T Consensus        68 -~~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vy-g~~~~~--------  128 (347)
T PRK11908         68 -KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVY-GMCPDE--------  128 (347)
T ss_pred             -CCCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceee-ccCCCc--------
Confidence             6899999998643321    1233456789999999999988753    33 599999996533 210000        


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                       ...++.              ....-.....+...|+.+|.+.+.+++.++... ++.+..+.|+.+..
T Consensus       129 -~~~ee~--------------~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~~v~G  181 (347)
T PRK11908        129 -EFDPEA--------------SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE-GLNFTLFRPFNWIG  181 (347)
T ss_pred             -CcCccc--------------cccccCcCCCccchHHHHHHHHHHHHHHHHHHc-CCCeEEEeeeeeeC
Confidence             000000              000000001234579999999999999887664 55555566655543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.55  E-value=1.4e-13  Score=125.66  Aligned_cols=162  Identities=20%  Similarity=0.113  Sum_probs=114.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH--HHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE--AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++++|||||+|+||++++++|+++|++|++++|+..+...  ...++.....   .+.++.+|++|.+++.++++...
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~---~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP---GAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcC---CceEEEeeCCCHHHHHHHHHHhC
Confidence            357899999999999999999999999999999998865321  1111111111   27789999999999888877431


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                         +++|+|||+++.....         ..+.+++|+.++.++++++.    +.+.+++|++||.....           
T Consensus       135 ---~~~D~Vi~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~-----------  187 (390)
T PLN02657        135 ---DPVDVVVSCLASRTGG---------VKDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK-----------  187 (390)
T ss_pred             ---CCCcEEEECCccCCCC---------CccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC-----------
Confidence               2799999998743211         11335678888888888764    34556999999965321           


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                                                        +...|..+|...+...+.   ...+++...+.|+.+.
T Consensus       188 ----------------------------------p~~~~~~sK~~~E~~l~~---~~~gl~~tIlRp~~~~  221 (390)
T PLN02657        188 ----------------------------------PLLEFQRAKLKFEAELQA---LDSDFTYSIVRPTAFF  221 (390)
T ss_pred             ----------------------------------cchHHHHHHHHHHHHHHh---ccCCCCEEEEccHHHh
Confidence                                              234577788888877654   2257777788886654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.53  E-value=2.1e-13  Score=120.13  Aligned_cols=172  Identities=25%  Similarity=0.139  Sum_probs=122.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc-
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL-   87 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i-   87 (275)
                      ||||||+|.||++++++|.++|++|+.++|.........          ..+..+.+|+++.+.+.+..+       .. 
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~-------~~~   65 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK-------GVP   65 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh-------cCC
Confidence            999999999999999999999999999999776533322          126778899998855554444       23 


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |.++|.|+........  .. ...+.+.+|+.++.++++++..    .+..++|+.||.....+. .+            
T Consensus        66 d~vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~-~~------------  125 (314)
T COG0451          66 DAVIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGD-PP------------  125 (314)
T ss_pred             CEEEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCC-CC------------
Confidence            9999999876543211  11 4567899999999999999865    345689996664433221 00            


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhc-CCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANR-GWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                       ...+.+. .+..+...|+.+|.+.+.+++.+.. ..++.+..+.|+.+..+.
T Consensus       126 -----------------~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~  176 (314)
T COG0451         126 -----------------PLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR-LYGLPVVILRPFNVYGPG  176 (314)
T ss_pred             -----------------CCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCeEEEeeeeeeCCC
Confidence                             0012222 2223333899999999999999988 457888888888776654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.53  E-value=1.7e-13  Score=119.61  Aligned_cols=153  Identities=20%  Similarity=0.164  Sum_probs=111.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||.+++++|+++|++|++++|.                        .+|+.+.+++.++++..     ++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~-----~~   51 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAI-----RP   51 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhC-----CC
Confidence            47999999999999999999999999999884                        36889999888887643     68


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++||+++......    ..+.....+++|+.++.++++++..    .+ .++|++||.....+..              
T Consensus        52 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~--------------  108 (287)
T TIGR01214        52 DAVVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEG--------------  108 (287)
T ss_pred             CEEEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCC--------------
Confidence            99999998653221    2234567789999999999998753    23 4899999954321110              


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                       ...+.+..+..+...|+.+|.+.+.+++.+     +..+..+.|+.+..+
T Consensus       109 -----------------~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-----~~~~~ilR~~~v~G~  153 (287)
T TIGR01214       109 -----------------KRPYREDDATNPLNVYGQSKLAGEQAIRAA-----GPNALIVRTSWLYGG  153 (287)
T ss_pred             -----------------CCCCCCCCCCCCcchhhHHHHHHHHHHHHh-----CCCeEEEEeeecccC
Confidence                             001222223344678999999999998876     345677777777544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.53  E-value=3.2e-13  Score=131.43  Aligned_cols=187  Identities=17%  Similarity=0.113  Sum_probs=123.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+.|+||||||+|.||++++++|+++  +++|+..+|.... ... ..+.... ....+.++.+|+++.+.+..++..  
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSK-SSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcc-cCCCeEEEECCCCChHHHHHHHhh--
Confidence            46789999999999999999999987  6889988875311 011 1111110 111378889999998876665432  


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                         .++|+|||+|+......    ..+...+.+++|+.++.++++++...   ....++|++||....-....+.     
T Consensus        79 ---~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~-----  143 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDA-----  143 (668)
T ss_pred             ---cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCcccc-----
Confidence               37999999998754321    22234567899999999999987542   1246999999954321110000     


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                             .....+..+..+...|+.+|.+.+.+++.++.++ ++.+..+.|+.|..+
T Consensus       144 -----------------------~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~-~l~~vilR~~~VyGp  192 (668)
T PLN02260        144 -----------------------DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGP  192 (668)
T ss_pred             -----------------------ccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCEEEECcccccCc
Confidence                                   0001112222345689999999999999887764 677777888777554

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.53  E-value=2e-13  Score=120.49  Aligned_cols=170  Identities=19%  Similarity=0.078  Sum_probs=112.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ||||||+|.||++++++|.++|+ .|++++|..... .. .++.        ...+..|+.+.+.++.+.+.   .+.++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~--------~~~~~~d~~~~~~~~~~~~~---~~~~~   67 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA--------DLVIADYIDKEDFLDRLEKG---AFGKI   67 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh--------heeeeccCcchhHHHHHHhh---ccCCC
Confidence            68999999999999999999998 788887654321 11 1111        12355788877665555442   34689


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++||+|+....      +.++.+..+++|+.++.++++++..    ++ .++|++||.... +...             
T Consensus        68 D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy-~~~~-------------  122 (314)
T TIGR02197        68 EAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATY-GDGE-------------  122 (314)
T ss_pred             CEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhc-CCCC-------------
Confidence            999999986432      2345677889999999999998754    23 489999995432 2100             


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCC-CCCCchhhHhHHHHHHHHHHHHHh-CCCeEEEeecCCeeecC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKR-YPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~~-~~~i~vn~v~pG~v~T~  234 (275)
                                        ..+.+... ..+...|+.+|.+.+.+++..... ..++.+..+.|+.+..+
T Consensus       123 ------------------~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~  173 (314)
T TIGR02197       123 ------------------AGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGP  173 (314)
T ss_pred             ------------------CCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCC
Confidence                              00111111 124668999999999999864433 34566777777666544

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.52  E-value=1.1e-13  Score=121.80  Aligned_cols=144  Identities=14%  Similarity=0.055  Sum_probs=103.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|.||++++++|+++| +|+.++|...                    .+..|++|.+.+.++++..     ++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999 7888887521                    1347999999988887743     68


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+|+......    ..+..+..+.+|+.++.++++++..    .+ .++|++||..-..+.               
T Consensus        56 D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~---------------  111 (299)
T PRK09987         56 DVIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDYVFPGT---------------  111 (299)
T ss_pred             CEEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccceEECCC---------------
Confidence            99999998754321    1223456678999999999998854    23 489999985432111               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHh
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  217 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~  217 (275)
                                      ....+.|..++.+...|+.+|.+.+.+++.+...
T Consensus       112 ----------------~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~  145 (299)
T PRK09987        112 ----------------GDIPWQETDATAPLNVYGETKLAGEKALQEHCAK  145 (299)
T ss_pred             ----------------CCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence                            0011333344456678999999999998876443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.47  E-value=4.7e-13  Score=114.85  Aligned_cols=186  Identities=17%  Similarity=0.129  Sum_probs=102.7

Q ss_pred             EecCCCchhHHHHHHHHHCCC--EEEEEecChhH---HHHHHHHHHhcCC-------CCCceeEEEecccChH-HH-HHH
Q 023896           11 VTGSNKGIGFETVRQLASKGI--TVVLTARDEKR---GLEAVEKLKASGV-------DPELLLFHQLDISDLA-SV-SSL   76 (275)
Q Consensus        11 ItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~---~~~~~~~l~~~~~-------~~~~~~~~~~Dl~~~~-~v-~~~   76 (275)
                      ||||||.||..+.++|++.+.  +|++..|....   .++..+.+.....       ...++.++..|++++. .+ ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997643   2222222221110       1245999999999865 11 112


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+++.+   .+|++||+|+...+.       ..+++..++|+.|+..+++.+..    .+..+++++|| +...+.....
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iST-a~v~~~~~~~  145 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYIST-AYVAGSRPGT  145 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEE-GGGTTS-TTT
T ss_pred             hhcccc---ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEecc-ccccCCCCCc
Confidence            233322   689999999877653       25566788999999999998863    22349999999 3222211000


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                      ..+    ....                 ..+............|..||...|.+++..+.+ .++.+..+.||.|-.
T Consensus       146 ~~~----~~~~-----------------~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~-~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  146 IEE----KVYP-----------------EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR-HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             --S----SS-H-----------------HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH-H---EEEEEE-EEE-
T ss_pred             ccc----cccc-----------------cccccchhhccCCccHHHHHHHHHHHHHHHHhc-CCceEEEEecCcccc
Confidence            000    0000                 000111122245569999999999999988876 477899999999976

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.47  E-value=6e-13  Score=117.05  Aligned_cols=163  Identities=17%  Similarity=0.166  Sum_probs=111.3

Q ss_pred             EEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCccE
Q 023896           10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDI   89 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   89 (275)
                      |||||+|.||+++++.|++.|++|++..+.                       ..+|+++.+++.++++..     ++|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~-----~~d~   52 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKE-----KPTY   52 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhcc-----CCCE
Confidence            699999999999999999999988765421                       137999999888877643     6899


Q ss_pred             EEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhH
Q 023896           90 LTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE  169 (275)
Q Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  169 (275)
                      |||+|+.......   ..+...+.+++|+.++.++++++..    .+..++|++||..- .+..+         ....++
T Consensus        53 Vih~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~v-yg~~~---------~~~~~E  115 (306)
T PLN02725         53 VILAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCI-YPKFA---------PQPIPE  115 (306)
T ss_pred             EEEeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceee-cCCCC---------CCCCCH
Confidence            9999986432111   1123346788999999999998864    34468999999542 22100         000111


Q ss_pred             HHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          170 ERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      +.                .. ..+. +....|+.+|.+.+.+++.+...+ ++++..+.|+.+..+.
T Consensus       116 ~~----------------~~-~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        116 TA----------------LL-TGPPEPTNEWYAIAKIAGIKMCQAYRIQY-GWDAISGMPTNLYGPH  164 (306)
T ss_pred             HH----------------hc-cCCCCCCcchHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCCC
Confidence            10                00 0111 223459999999999998887664 6788888888876653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.45  E-value=1.8e-12  Score=120.01  Aligned_cols=176  Identities=16%  Similarity=0.003  Sum_probs=112.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++++||||||+|.||++++++|+++|++|++++|............  ..  ..++..+..|+.+..     +       
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~--~~--~~~~~~i~~D~~~~~-----l-------  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH--FS--NPNFELIRHDVVEPI-----L-------  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh--cc--CCceEEEECCccChh-----h-------
Confidence            5789999999999999999999999999999887543211111111  11  112667778876542     1       


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ..+|+|||.|+......    ......+.+++|+.++.++++++..    .+ .++|++||..........         
T Consensus       182 ~~~D~ViHlAa~~~~~~----~~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~---------  243 (442)
T PLN02206        182 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQH---------  243 (442)
T ss_pred             cCCCEEEEeeeecchhh----hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCC---------
Confidence            25899999998643221    1123457889999999999998854    23 389999996533211000         


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhh-hhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEI-ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                        ...+.. .+..+......|+.+|.+.+.+++.+...+ ++++..+.|+.+..
T Consensus       244 ------------------p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-g~~~~ilR~~~vyG  294 (442)
T PLN02206        244 ------------------PQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-NVEVRIARIFNTYG  294 (442)
T ss_pred             ------------------CCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHh-CCCeEEEEeccccC
Confidence                              000000 001122335689999999999998876664 56666555554443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.43  E-value=4.2e-12  Score=117.34  Aligned_cols=177  Identities=16%  Similarity=0.037  Sum_probs=112.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.++||||||+|.||++++++|+++|++|++++|...........+.  . . .++.++..|+.+..     +       
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~-~-~~~~~~~~Di~~~~-----~-------  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--G-N-PRFELIRHDVVEPI-----L-------  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--c-C-CceEEEECcccccc-----c-------
Confidence            35789999999999999999999999999999986432111111111  1 1 12667777876542     1       


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      .++|+|||.|+.......    ..+-.+.+++|+.++.++++++...    + .++|++||.........          
T Consensus       183 ~~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~----------  243 (436)
T PLN02166        183 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLE----------  243 (436)
T ss_pred             cCCCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCC----------
Confidence            268999999986433211    1234578899999999999988642    3 48999999542211100          


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                      ...++                .......+..+...|+.+|.+.+.+++.+.+.+ ++++..+.|+.+..
T Consensus       244 ~p~~E----------------~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~-~l~~~ilR~~~vYG  295 (436)
T PLN02166        244 HPQKE----------------TYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA-GVEVRIARIFNTYG  295 (436)
T ss_pred             CCCCc----------------cccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEEccccC
Confidence            00000                000001122345689999999999999887664 55555555554443

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.40  E-value=3.7e-12  Score=111.50  Aligned_cols=154  Identities=22%  Similarity=0.214  Sum_probs=104.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      .++|||||+|.||.++.+.|.++|++|+.++|+                        .+|+++.+++.+++++.     +
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~-----~   51 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAF-----K   51 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHh-----C
Confidence            379999999999999999999999999999877                        47999999999998877     7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+|+......    -.+.-+..+.+|+.++.++++.+..     .+.++|++||..-..+.              
T Consensus        52 pd~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~--------------  108 (286)
T PF04321_consen   52 PDVVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGD--------------  108 (286)
T ss_dssp             -SEEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SS--------------
T ss_pred             CCeEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCC--------------
Confidence            999999998765432    2345667889999999999998864     24699999995433222              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                       ....+.+...+.+...|+-+|...|..++...   +  +...+.++++..+
T Consensus       109 -----------------~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~---~--~~~IlR~~~~~g~  154 (286)
T PF04321_consen  109 -----------------KGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC---P--NALILRTSWVYGP  154 (286)
T ss_dssp             -----------------TSSSB-TTS----SSHHHHHHHHHHHHHHHH----S--SEEEEEE-SEESS
T ss_pred             -----------------cccccccCCCCCCCCHHHHHHHHHHHHHHHhc---C--CEEEEecceeccc
Confidence                             11124455555678999999999999888632   2  3444555555443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.38  E-value=7.4e-12  Score=111.14  Aligned_cols=111  Identities=16%  Similarity=0.102  Sum_probs=84.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +++||||+|.||++++++|+++|++|++.+|+..+...    +...     .+.++.+|+++.+++.++++       ++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~~-----~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKEW-----GAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhhc-----CCEEEECCCCCHHHHHHHHC-------CC
Confidence            69999999999999999999999999999999754322    1111     17788999999988776665       68


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      |++||.++....         +.....++|+.++.++++++..    .+-.++|++||..
T Consensus        66 d~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~  112 (317)
T CHL00194         66 TAIIDASTSRPS---------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILN  112 (317)
T ss_pred             CEEEECCCCCCC---------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEecccc
Confidence            999998753211         1234567788899888887754    3446999999853

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.36  E-value=3.2e-11  Score=106.30  Aligned_cols=186  Identities=17%  Similarity=0.150  Sum_probs=122.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChh---HHHHHHHHHHh----cCCCCCceeEEEecccChH------H
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEK---RGLEAVEKLKA----SGVDPELLLFHQLDISDLA------S   72 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~---~~~~~~~~l~~----~~~~~~~~~~~~~Dl~~~~------~   72 (275)
                      +++|+|||||.||..+.++|+.+- ++|++..|-..   ..+++.+.+..    ......++.++..|++.++      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999765 58999887443   22233333321    1123456999999999544      2


Q ss_pred             HHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           73 VSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      .+.+.       ..+|.++||++...+-       ..+.+....|+.|+-.+++.+.-    .+...+.+|||++.....
T Consensus        81 ~~~La-------~~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~  142 (382)
T COG3320          81 WQELA-------ENVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHHh-------hhcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeecccc
Confidence            22332       2799999999877653       35777888999999999987643    223359999997644222


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                      .........+       + +.+              .-..+......|+-||.+.|.+++.....  |.++..+.||+|-
T Consensus       143 ~~~~~~~~~~-------~-~~~--------------~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r--GLpv~I~Rpg~I~  198 (382)
T COG3320         143 YYSNFTVDFD-------E-ISP--------------TRNVGQGLAGGYGRSKWVAEKLVREAGDR--GLPVTIFRPGYIT  198 (382)
T ss_pred             ccCCCccccc-------c-ccc--------------cccccCccCCCcchhHHHHHHHHHHHhhc--CCCeEEEecCeee
Confidence            1100000000       0 000              00122245678999999999999977666  8899999999995


Q ss_pred             cC
Q 023896          233 TD  234 (275)
Q Consensus       233 T~  234 (275)
                      .+
T Consensus       199 gd  200 (382)
T COG3320         199 GD  200 (382)
T ss_pred             cc
Confidence            44

>PLN02996 fatty acyl-CoA reductase

Probab=99.34  E-value=2.7e-11  Score=113.56  Aligned_cols=129  Identities=16%  Similarity=0.066  Sum_probs=87.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhH--H-HHHHHHH---------HhcCC-C-----CCceeE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKR--G-LEAVEKL---------KASGV-D-----PELLLF   62 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~--~-~~~~~~l---------~~~~~-~-----~~~~~~   62 (275)
                      .++|+|+||||||.||+.++.+|+..+.   +|++..|....  . +....++         .+... .     ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4789999999999999999999997642   67888885531  1 1111111         11000 0     134889


Q ss_pred             EEecccCh-------HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC
Q 023896           63 HQLDISDL-------ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  135 (275)
Q Consensus        63 ~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  135 (275)
                      +..|++++       +.++.+++       .+|+|||+|+.....       +..+..+++|+.|+.++++.+...   .
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---V  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence            99999843       33333333       689999999865421       346778999999999999987542   1


Q ss_pred             CCCeEEEEecCccc
Q 023896          136 DSPRLVNLSSYVSA  149 (275)
Q Consensus       136 ~~g~iv~vsS~~~~  149 (275)
                      +-.++|++||....
T Consensus       152 ~~k~~V~vST~~vy  165 (491)
T PLN02996        152 KVKMLLHVSTAYVC  165 (491)
T ss_pred             CCCeEEEEeeeEEe
Confidence            23489999986543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.33  E-value=5.6e-11  Score=115.46  Aligned_cols=176  Identities=18%  Similarity=0.071  Sum_probs=114.3

Q ss_pred             EEEEecCCCchhHHHHHHHH--HCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHH--HHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLA--SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASV--SSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~--~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v--~~~~~~~~~~   83 (275)
                      ++|||||+|.||++++++|+  ..|++|++++|+... ... ..+..... ..++..+.+|+++.+..  ....+++   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWG-ADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcC-CCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  579999999996542 111 12211111 12388889999985310  1112222   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                       .++|++||+|+.....       ....+..++|+.++.++++++..    .+..++|++||.........         
T Consensus        76 -~~~D~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~---------  134 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEG---------  134 (657)
T ss_pred             -cCCCEEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccC---------
Confidence             3799999999865332       12355678999999999988753    33469999999654321100         


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                        ..+++                ...  ........|+.+|...+.+++.    ..++.+..+.|+.|..+
T Consensus       135 --~~~e~----------------~~~--~~~~~~~~Y~~sK~~~E~~~~~----~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        135 --VFRED----------------DFD--EGQGLPTPYHRTKFEAEKLVRE----ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             --ccccc----------------cch--hhcCCCCchHHHHHHHHHHHHH----cCCCcEEEEcCCeeeec
Confidence              00000                000  0012345799999999988863    35788899999988653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.31  E-value=1.6e-10  Score=94.09  Aligned_cols=150  Identities=18%  Similarity=0.124  Sum_probs=106.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      |+|+||||.+|+.++++|+++|++|++..|++++.+.        .   ..+.++++|+.+.+++.+.++       +.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~---~~~~~~~~d~~d~~~~~~al~-------~~d   62 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------S---PGVEIIQGDLFDPDSVKAALK-------GAD   62 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------C---TTEEEEESCTTCHHHHHHHHT-------TSS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------c---cccccceeeehhhhhhhhhhh-------hcc
Confidence            6899999999999999999999999999999987655        1   228999999999988777665       789


Q ss_pred             EEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchh
Q 023896           89 ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT  168 (275)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  168 (275)
                      ++++++|....         +            ...++.++..+++++..++|++||..........             
T Consensus        63 ~vi~~~~~~~~---------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~-------------  108 (183)
T PF13460_consen   63 AVIHAAGPPPK---------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL-------------  108 (183)
T ss_dssp             EEEECCHSTTT---------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE-------------
T ss_pred             hhhhhhhhhcc---------c------------ccccccccccccccccccceeeeccccCCCCCcc-------------
Confidence            99999864322         0            4445556666666677799999996544321000             


Q ss_pred             HHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                         ... ...+....|...|...+.+.+    + .+++...+.||++..+.
T Consensus       109 -------------------~~~-~~~~~~~~~~~~~~~~e~~~~----~-~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  109 -------------------FSD-EDKPIFPEYARDKREAEEALR----E-SGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             -------------------EEG-GTCGGGHHHHHHHHHHHHHHH----H-STSEEEEEEESEEEBTT
T ss_pred             -------------------ccc-ccccchhhhHHHHHHHHHHHH----h-cCCCEEEEECcEeEeCC
Confidence                               000 000112356667766654442    2 48899999999997765

...

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=2.6e-11  Score=104.25  Aligned_cols=137  Identities=23%  Similarity=0.201  Sum_probs=109.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      +||||++|.+|.++++.|. .+++|+.++|..                        +|+++.+.+.+++++.     ++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~-----~PD   52 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRET-----RPD   52 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhh-----CCC
Confidence            8999999999999999999 678999887654                        7999999999999887     899


Q ss_pred             EEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchh
Q 023896           89 ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT  168 (275)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  168 (275)
                      +|||+|++.....    -..+.+..+.+|..++.++++++..     -+..+|++|+-.-..+..               
T Consensus        53 vVIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~---------------  108 (281)
T COG1091          53 VVINAAAYTAVDK----AESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEK---------------  108 (281)
T ss_pred             EEEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCC---------------
Confidence            9999999876543    2334678899999999999999854     246999999955443320               


Q ss_pred             HHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHH
Q 023896          169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  215 (275)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a  215 (275)
                                      .+.+.+...+.+...||.||.+.+..++...
T Consensus       109 ----------------~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         109 ----------------GGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             ----------------CCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence                            1224555566778899999999999998764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=2.1e-11  Score=103.20  Aligned_cols=182  Identities=19%  Similarity=0.076  Sum_probs=134.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc-CCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++||||-||.-|.-+++.|+++||.|..+.|..+......-.|... ..+..+++.+.+||+|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            689999999999999999999999999999987654322211022221 112233888999999999999999988    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|-+.|-|+.+...    .+.+.-..+.+++-.|+++|++++.-.=  .+.-++...||+.-. +.            
T Consensus        78 -~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~f-G~------------  137 (345)
T COG1089          78 -QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELY-GL------------  137 (345)
T ss_pred             -Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhh-cC------------
Confidence             789999988765543    4666777889999999999999875432  223577777774321 11            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPG  229 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG  229 (275)
                                        ..+.+-.+..|..+.++|+++|....-++..++..|     .||-+|.=+|.
T Consensus       138 ------------------v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         138 ------------------VQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             ------------------cccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence                              112234566777889999999999999999988887     47888877765

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.28  E-value=2.2e-10  Score=99.41  Aligned_cols=182  Identities=16%  Similarity=0.150  Sum_probs=139.1

Q ss_pred             CCCEEEEecC-CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa-~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +..+|||.|. +.-|++.+|..|-++|+.|++++.+.++.....++-    ...  +.....|..+..++...+.++.+.
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~----~~d--I~~L~ld~~~~~~~~~~l~~f~~~   75 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED----RPD--IRPLWLDDSDPSSIHASLSRFASL   75 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc----CCC--CCCcccCCCCCcchHHHHHHHHHH
Confidence            3568999995 899999999999999999999999987644443221    111  777888887777777777666654


Q ss_pred             cC--------------CccEEEcCCc-ccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC--CCCeEEEEe-c
Q 023896           84 FG--------------KLDILTKGDA-EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLS-S  145 (275)
Q Consensus        84 ~g--------------~id~li~~ag-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~vs-S  145 (275)
                      +.              .+..+|.... ..+.++++..+.+.|.+.++.|+..++..++.++|+++.+  ++.+||+++ |
T Consensus        76 L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Ps  155 (299)
T PF08643_consen   76 LSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPS  155 (299)
T ss_pred             hcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCc
Confidence            43              3444444322 2356677888999999999999999999999999999871  235655555 5


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV  223 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v  223 (275)
                      +...+..                                          |..+.-.....++.++.+.|++|.  .+|.|
T Consensus       156 i~ssl~~------------------------------------------PfhspE~~~~~al~~~~~~LrrEl~~~~I~V  193 (299)
T PF08643_consen  156 ISSSLNP------------------------------------------PFHSPESIVSSALSSFFTSLRRELRPHNIDV  193 (299)
T ss_pred             hhhccCC------------------------------------------CccCHHHHHHHHHHHHHHHHHHHhhhcCCce
Confidence            5444433                                          778889999999999999999998  48999


Q ss_pred             EeecCCeeecC
Q 023896          224 NCVCPGFVKTD  234 (275)
Q Consensus       224 n~v~pG~v~T~  234 (275)
                      ..+..|.++-.
T Consensus       194 ~~i~LG~l~i~  204 (299)
T PF08643_consen  194 TQIKLGNLDIG  204 (299)
T ss_pred             EEEEeeeeccc
Confidence            99999988765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.26  E-value=4.6e-10  Score=106.82  Aligned_cols=209  Identities=10%  Similarity=0.061  Sum_probs=122.8

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhH--HH-HHHHHH---------HhcCCC------CCceeE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKR--GL-EAVEKL---------KASGVD------PELLLF   62 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~--~~-~~~~~l---------~~~~~~------~~~~~~   62 (275)
                      +++|+|+||||||.||+.++++|++.+.   +|++..|....  .. ...+++         .+..+.      ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998653   67888885432  22 221122         111111      245889


Q ss_pred             EEecccChH------HHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC
Q 023896           63 HQLDISDLA------SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  136 (275)
Q Consensus        63 ~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  136 (275)
                      +..|+++++      ..+.+.+       .+|+|||+|+....       .+.++..+++|+.|+.++++.+...   ..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---~~  259 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---KK  259 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---CC
Confidence            999999873      2222222       68999999986542       1457788999999999999987542   12


Q ss_pred             CCeEEEEecCccccCCCcHHHHhhhccc------------------cchhHHHHHHHHHH-hh----hhhchhhhhh---
Q 023896          137 SPRLVNLSSYVSALKDLPEKARAVLGDV------------------ENLTEERIEMVVKD-YF----KDYEEGEIAN---  190 (275)
Q Consensus       137 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~----~~~~~~~~~~---  190 (275)
                      ..++|++||.... +.......+...+.                  +..+++....+..+ +.    ......+..+   
T Consensus       260 lk~fV~vSTayVy-G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~  338 (605)
T PLN02503        260 LKLFLQVSTAYVN-GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGL  338 (605)
T ss_pred             CCeEEEccCceee-cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhccc
Confidence            2478998885433 22211111111110                  12233332222211 11    0000111111   


Q ss_pred             --cCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          191 --RGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       191 --~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                        .....+-..|.-+|+..|.+++..+   .++.+..+.|..|.+
T Consensus       339 ~~~~~~~~pNtYt~TK~lAE~lV~~~~---~~LPv~IvRPsiV~s  380 (605)
T PLN02503        339 ERAKLYGWQDTYVFTKAMGEMVINSMR---GDIPVVIIRPSVIES  380 (605)
T ss_pred             chhhhCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEcCCEecc
Confidence              1112344689999999999998544   356667777776644

>PRK05865 hypothetical protein; Provisional

Probab=99.24  E-value=1.7e-10  Score=113.23  Aligned_cols=102  Identities=25%  Similarity=0.194  Sum_probs=81.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +++||||+|+||++++++|+++|++|++++|+....      ..   .   .+.++.+|+++.+++.++++       ++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~---~---~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP---S---SADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc---c---CceEEEeeCCCHHHHHHHHh-------CC
Confidence            699999999999999999999999999999975321      10   1   26788999999998877765       58


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      |++||+|+....             .+++|+.++.++++++.    +.+.+++|++||
T Consensus        63 D~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS  103 (854)
T PRK05865         63 DVVAHCAWVRGR-------------NDHINIDGTANVLKAMA----ETGTGRIVFTSS  103 (854)
T ss_pred             CEEEECCCcccc-------------hHHHHHHHHHHHHHHHH----HcCCCeEEEECC
Confidence            999999975321             36789999998887764    345569999999

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.24  E-value=5.2e-10  Score=87.29  Aligned_cols=179  Identities=13%  Similarity=0.050  Sum_probs=116.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +-++|+|-|+-|.+|++|+..|-+++|-|.-++-.+..          ....   -.++..|-+=.++-+...+++.+.+
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe----------~Ad~---sI~V~~~~swtEQe~~v~~~vg~sL   68 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE----------QADS---SILVDGNKSWTEQEQSVLEQVGSSL   68 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc----------cccc---eEEecCCcchhHHHHHHHHHHHHhh
Confidence            45789999999999999999999999999888754421          0000   2233444444455566777777655


Q ss_pred             C--CccEEEcCCcccccchhh-ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           85 G--KLDILTKGDAEVDWSKVC-YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        85 g--~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +  ++|.++|.||.-.-.... ..-.+..+.+++-.+.......+..-.+++  ++|-+-..+.-++..++         
T Consensus        69 ~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaAl~gT---------  137 (236)
T KOG4022|consen   69 QGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAALGGT---------  137 (236)
T ss_pred             cccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccccCCC---------
Confidence            3  899999988642111000 001123334444444444444444444442  33444444443333333         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       |+...|+++|+|+++++++++.+.    ++--+.+|-|-..+|||.+
T Consensus       138 ---------------------------------PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR  184 (236)
T KOG4022|consen  138 ---------------------------------PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR  184 (236)
T ss_pred             ---------------------------------CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc
Confidence                                             888999999999999999999986    4677888999999999988


Q ss_pred             CCC
Q 023896          238 HAG  240 (275)
Q Consensus       238 ~~~  240 (275)
                      .+.
T Consensus       185 KwM  187 (236)
T KOG4022|consen  185 KWM  187 (236)
T ss_pred             ccC
Confidence            763

>PLN02778 3,5-epimerase/4-reductase

Probab=99.24  E-value=1.8e-10  Score=101.41  Aligned_cols=153  Identities=16%  Similarity=0.065  Sum_probs=94.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ..+++|||||+|.||+++++.|+++|++|+...                           .|+.+.+.+...++..    
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~----   56 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAV----   56 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhc----
Confidence            347899999999999999999999999987432                           1233444444444322    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc-CC-CcHHHHhhhc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL-KD-LPEKARAVLG  162 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~-~~-~~~~~~~~~~  162 (275)
                       ++|+|||.|+....... ....+.-.+.+++|+.++.++++++...    +- +.+++||..-.. .. .+...     
T Consensus        57 -~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~-----  124 (298)
T PLN02778         57 -KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGS-----  124 (298)
T ss_pred             -CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCccc-----
Confidence             68999999987543211 1122345678999999999999998642    22 345555432111 00 00000     


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcC-CCCCCchhhHhHHHHHHHHHHHHHhCCCeEE
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRG-WCPHSSAYKVSKAVINAYTRILAKRYPKFCV  223 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~v  223 (275)
                                            ...+.+.. +.+....|+.+|.+.+.+++.++..+ .+|+
T Consensus       125 ----------------------~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~~-~lr~  163 (298)
T PLN02778        125 ----------------------GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC-TLRV  163 (298)
T ss_pred             ----------------------CCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhccE-Eeee
Confidence                                  00022221 22334689999999999998875432 4444

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.16  E-value=5.1e-10  Score=99.54  Aligned_cols=182  Identities=16%  Similarity=0.063  Sum_probs=119.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +..++|||||+|.||.+++.+|.+.+  .+|.+.+..+..-....+.. ..  ...++..+++|+.+..++.+.++    
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~--~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GF--RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cc--cCCceeEEecchhhhhhhhhhcc----
Confidence            57889999999999999999999998  68888887664211111111 11  12348889999999888777766    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         +. .++|+|....+.    ....+-+..+++|+.|+.++++++..    .+..++|++||..-..+..+     ..+
T Consensus        76 ---~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~-----~~n  138 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEP-----IIN  138 (361)
T ss_pred             ---Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCee-----ccc
Confidence               55 555555433221    12235778899999999999998865    45679999999776665422     000


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                      ..                       -+...+......|+.||+-.|.+++..... ....-.++.|-.|..|
T Consensus       139 ~~-----------------------E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~-~~l~T~aLR~~~IYGp  186 (361)
T KOG1430|consen  139 GD-----------------------ESLPYPLKHIDPYGESKALAEKLVLEANGS-DDLYTCALRPPGIYGP  186 (361)
T ss_pred             CC-----------------------CCCCCccccccccchHHHHHHHHHHHhcCC-CCeeEEEEccccccCC
Confidence            00                       001111233458999999999999877642 2334445555555443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.14  E-value=1.1e-10  Score=98.67  Aligned_cols=107  Identities=18%  Similarity=0.165  Sum_probs=80.8

Q ss_pred             EEEEecC-CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa-~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +-.||.. +||||+++|+.|+++|++|+++++...        +..       .....+|+++.+++.++++++.+.+++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-------EPHPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-------ccCCcceeecHHHHHHHHHHHHHHcCC
Confidence            3345554 689999999999999999999886311        110       001358999999999999999999999


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhh
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  132 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  132 (275)
                      +|++|||||+....+..+.+.++|+++   +..+.|.+.+..-..+
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~~~~~Ki  123 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQNHEAKI  123 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhh---cchhhhhccccccCCc
Confidence            999999999877777778888888877   4456666665443333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.11  E-value=1.1e-09  Score=95.48  Aligned_cols=99  Identities=18%  Similarity=0.084  Sum_probs=67.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      ||||||+|.||++++++|+++|++|++++|+........    .       ..  ..|+.. ..       ..+.+.++|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-------~~--~~~~~~-~~-------~~~~~~~~D   59 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W-------EG--YKPWAP-LA-------ESEALEGAD   59 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c-------ee--eecccc-cc-------hhhhcCCCC
Confidence            689999999999999999999999999999886532210    0       00  112221 11       122335799


Q ss_pred             EEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           89 ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                      +|||+|+......  ....+...+.+++|+.++..+++++..
T Consensus        60 ~Vvh~a~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        60 AVINLAGEPIADK--RWTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             EEEECCCCCcccc--cCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence            9999998643211  123445567889999999999988854

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.11  E-value=4.7e-10  Score=94.99  Aligned_cols=186  Identities=19%  Similarity=0.147  Sum_probs=121.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      --+.++++||||.|.||+..+..++..  .++.+..+.-.--..  ++.++.. .+..+.+++..|+.++..+..++.+ 
T Consensus         3 ~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~-   78 (331)
T KOG0747|consen    3 TYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPV-RNSPNYKFVEGDIADADLVLYLFET-   78 (331)
T ss_pred             CCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhh-ccCCCceEeeccccchHHHHhhhcc-
Confidence            345589999999999999999999986  345554432110000  1112111 1223488999999999987777652 


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          .+||.|+|-|.......    +.-+--+....|++++..|++...-.-   +-.++|.+|+-.-....        
T Consensus        79 ----~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds--------  139 (331)
T KOG0747|consen   79 ----EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDS--------  139 (331)
T ss_pred             ----CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCc--------
Confidence                38999999887644322    122233556889999999999886543   33589999994422111        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                            ..+.-..+...+.+..+|+++|+|.+++.+++.+.| ++-+..+.-+.|..|
T Consensus       140 ----------------------~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy-~lpvv~~R~nnVYGP  190 (331)
T KOG0747|consen  140 ----------------------DEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY-GLPVVTTRMNNVYGP  190 (331)
T ss_pred             ----------------------cccccccccccCCCCCchHHHHHHHHHHHHHHhhcc-CCcEEEEeccCccCC
Confidence                                  011112255666778999999999999999999998 444444444444443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.10  E-value=2.2e-09  Score=104.61  Aligned_cols=157  Identities=14%  Similarity=0.029  Sum_probs=101.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+++|||||+|.||+++++.|.++|++|...                           ..|++|.+.+.+.++..     
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhh-----
Confidence            4679999999999999999999999887311                           13567777777766654     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc-HHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~  164 (275)
                      ++|+|||+|+....... +...+...+.+++|+.++.++++++...    + .+++++||......... +..       
T Consensus       428 ~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~-------  494 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEG-------  494 (668)
T ss_pred             CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccc-------
Confidence            68999999986532111 1223455688999999999999998652    3 35666666332111000 000       


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVC  227 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~  227 (275)
                                         ....+.+...+ +....|+.+|.+.+.+++.+. ....+|+..+.
T Consensus       495 -------------------~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~-~~~~~r~~~~~  538 (668)
T PLN02260        495 -------------------SGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD-NVCTLRVRMPI  538 (668)
T ss_pred             -------------------cCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh-hheEEEEEEec
Confidence                               00012222222 334789999999999998774 33456666665

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.08  E-value=5e-09  Score=109.88  Aligned_cols=197  Identities=16%  Similarity=0.119  Sum_probs=118.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC----CEEEEEecChhHHHH---HHHHHHhcCC----CCCceeEEEecccChHHH-
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKG----ITVVLTARDEKRGLE---AVEKLKASGV----DPELLLFHQLDISDLASV-   73 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g----~~vi~~~r~~~~~~~---~~~~l~~~~~----~~~~~~~~~~Dl~~~~~v-   73 (275)
                      .++|+||||+|.||..++++|++++    ++|+...|+......   ..+.+...+.    ...++.++..|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    789988897543222   2111111110    012488899999854200 


Q ss_pred             -HHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           74 -SSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        74 -~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                       ....+++.   ..+|++||+|+...+.       ..+......|+.|+.++++.+..    .+..+++++||.......
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~~~ 1116 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHWV-------YPYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALDTE 1116 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecCc-------cCHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecCcc
Confidence             11122222   3789999999876432       12444556799999999998753    234589999997544211


Q ss_pred             -CcHHHHhhhc-cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCe
Q 023896          153 -LPEKARAVLG-DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGF  230 (275)
Q Consensus       153 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~  230 (275)
                       ..+....... ......+               ...... ........|+.||.+.+.+++..+.  .++.+..+.||.
T Consensus      1117 ~~~~~~~~~~~~~~~~~~e---------------~~~~~~-~~~~~~~~Y~~sK~~aE~l~~~~~~--~g~~~~i~Rpg~ 1178 (1389)
T TIGR03443      1117 YYVNLSDELVQAGGAGIPE---------------SDDLMG-SSKGLGTGYGQSKWVAEYIIREAGK--RGLRGCIVRPGY 1178 (1389)
T ss_pred             cccchhhhhhhccCCCCCc---------------cccccc-ccccCCCChHHHHHHHHHHHHHHHh--CCCCEEEECCCc
Confidence             0000000000 0000000               000000 0112345699999999999987654  488999999999


Q ss_pred             eecC
Q 023896          231 VKTD  234 (275)
Q Consensus       231 v~T~  234 (275)
                      |..+
T Consensus      1179 v~G~ 1182 (1389)
T TIGR03443      1179 VTGD 1182 (1389)
T ss_pred             cccC
Confidence            8654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.05  E-value=2.3e-09  Score=87.07  Aligned_cols=84  Identities=21%  Similarity=0.160  Sum_probs=69.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++++||||+ |+|.++++.|+++|++|++++|+.++.+.....+..    ..++.++++|++|++++.++++.+.+.+++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~----~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT----PESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            368999998 677789999999999999999998776665544432    123788899999999999999999999999


Q ss_pred             ccEEEcCCc
Q 023896           87 LDILTKGDA   95 (275)
Q Consensus        87 id~li~~ag   95 (275)
                      +|++|+..-
T Consensus        76 id~lv~~vh   84 (177)
T PRK08309         76 FDLAVAWIH   84 (177)
T ss_pred             CeEEEEecc
Confidence            999997654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.99  E-value=7.4e-09  Score=90.39  Aligned_cols=106  Identities=13%  Similarity=0.098  Sum_probs=75.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC-
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK-   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~-   86 (275)
                      ++|||||||.||+.++++|+++|++|.+..|+.++...       .  .   +..+.+|+.|.+++.++++.. +.+.. 
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-------~--~---~~~~~~d~~d~~~l~~a~~~~-~~~~g~   67 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-------P--N---EKHVKFDWLDEDTWDNPFSSD-DGMEPE   67 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-------C--C---CccccccCCCHHHHHHHHhcc-cCcCCc
Confidence            38999999999999999999999999999999875311       1  1   556678999999998887543 22334 


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      +|.++++++....         ..            ...+.+++.+++.+-.+||++||..
T Consensus        68 ~d~v~~~~~~~~~---------~~------------~~~~~~i~aa~~~gv~~~V~~Ss~~  107 (285)
T TIGR03649        68 ISAVYLVAPPIPD---------LA------------PPMIKFIDFARSKGVRRFVLLSASI  107 (285)
T ss_pred             eeEEEEeCCCCCC---------hh------------HHHHHHHHHHHHcCCCEEEEeeccc
Confidence            8999988753210         00            1112344445555667999999854

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=98.93  E-value=2e-08  Score=91.39  Aligned_cols=106  Identities=18%  Similarity=0.156  Sum_probs=70.2

Q ss_pred             CCCEEEEe----cCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH-------HHHHhcCCCCCceeEEEecccChHHH
Q 023896            5 TKKYAVVT----GSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-------EKLKASGVDPELLLFHQLDISDLASV   73 (275)
Q Consensus         5 ~~k~vlIt----Ga~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~~Dl~~~~~v   73 (275)
                      ..++||||    ||+|.||+.++++|+++|++|++++|+........       .++...     .+.++.+|+.+   +
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-----~v~~v~~D~~d---~  122 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA-----GVKTVWGDPAD---V  122 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc-----CceEEEecHHH---H
Confidence            35789999    99999999999999999999999999875422211       112111     16778888876   3


Q ss_pred             HHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           74 SSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      .+++.     ...+|+|||+++..                    ..++..+++++    ++.+-.++|++||..
T Consensus       123 ~~~~~-----~~~~d~Vi~~~~~~--------------------~~~~~~ll~aa----~~~gvkr~V~~SS~~  167 (378)
T PLN00016        123 KSKVA-----GAGFDVVYDNNGKD--------------------LDEVEPVADWA----KSPGLKQFLFCSSAG  167 (378)
T ss_pred             Hhhhc-----cCCccEEEeCCCCC--------------------HHHHHHHHHHH----HHcCCCEEEEEccHh
Confidence            33321     13689999986521                    01223344443    344556999999964

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.85  E-value=7.5e-09  Score=87.82  Aligned_cols=163  Identities=19%  Similarity=0.123  Sum_probs=101.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+++||||+|.||+++|.+|..+|+.||+.+.--..-.....-+-.    .-++..+.-|+...     ++.      
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~----~~~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG----HPNFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc----CcceeEEEeechhH-----HHH------
Confidence            568999999999999999999999999999998533211111111111    11244555555433     444      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       .+|.++|-|+...+.....    .-..++.+|+.++.+.+..+.+.     ..|++..|+.. +.+.  |         
T Consensus        91 -evD~IyhLAapasp~~y~~----npvktIktN~igtln~lglakrv-----~aR~l~aSTse-VYgd--p---------  148 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPPHYKY----NPVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSE-VYGD--P---------  148 (350)
T ss_pred             -HhhhhhhhccCCCCccccc----CccceeeecchhhHHHHHHHHHh-----CceEEEeeccc-ccCC--c---------
Confidence             4677888776655443321    22356789999999998877653     25777777733 2221  0         


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                           +++++....|         ....+......|...|...+.|+..+.++.
T Consensus       149 -----~~hpq~e~yw---------g~vnpigpr~cydegKr~aE~L~~~y~k~~  188 (350)
T KOG1429|consen  149 -----LVHPQVETYW---------GNVNPIGPRSCYDEGKRVAETLCYAYHKQE  188 (350)
T ss_pred             -----ccCCCccccc---------cccCcCCchhhhhHHHHHHHHHHHHhhccc
Confidence                 1111111111         111223557889999999999999999886

>PRK12320 hypothetical protein; Provisional

Probab=98.79  E-value=5.4e-08  Score=94.02  Aligned_cols=104  Identities=18%  Similarity=0.144  Sum_probs=77.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|.||++++++|+++|++|++++|+...       .  ..   ..+.++.+|+++.. +.+++       .++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~~---~~ve~v~~Dl~d~~-l~~al-------~~~   61 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--LD---PRVDYVCASLRNPV-LQELA-------GEA   61 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--cc---CCceEEEccCCCHH-HHHHh-------cCC
Confidence            69999999999999999999999999999987532       0  01   12778899999873 33332       268


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      |++||.|+.....            ...+|+.++.++++++..    .+ .++|++||..+
T Consensus        62 D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G  105 (699)
T PRK12320         62 DAVIHLAPVDTSA------------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG  105 (699)
T ss_pred             CEEEEcCccCccc------------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC
Confidence            9999999753211            124799999999988743    33 48999998643

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.74  E-value=2.1e-07  Score=85.27  Aligned_cols=202  Identities=20%  Similarity=0.150  Sum_probs=113.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC--C-EEEEEecChh--HH-HHHH--------HHHHh-cCCCCCceeEEEeccc
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG--I-TVVLTARDEK--RG-LEAV--------EKLKA-SGVDPELLLFHQLDIS   68 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g--~-~vi~~~r~~~--~~-~~~~--------~~l~~-~~~~~~~~~~~~~Dl~   68 (275)
                      +++|+++||||||++|+-++..|+..-  . ++.+.-|...  .. ++..        +.+.+ .+..-+++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            479999999999999999999999752  1 5666655332  11 1221        12222 2222345778888988


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      +++-=-+..+.. .....+|+++|.|+....       .|.++..+.+|.+|+.++++.+....   +-...+.+|+...
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~---~l~~~vhVSTAy~  158 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMV---KLKALVHVSTAYS  158 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhh---hhheEEEeehhhe
Confidence            766221111111 112379999999986543       36788889999999999999876543   2247788888555


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchh-hhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  219 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~  219 (275)
                      . ....-..-..+......+++....+....-..+-+. ...-.+  .+...|.-+|+-.+++....+..+|
T Consensus       159 n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~--~~PNTYtfTKal~E~~i~~~~~~lP  227 (467)
T KOG1221|consen  159 N-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLG--GWPNTYTFTKALAEMVIQKEAENLP  227 (467)
T ss_pred             e-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcC--CCCCceeehHhhHHHHHHhhccCCC
Confidence            4 222111111122222112221111111110000000 000011  2345799999999999988777764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.73  E-value=6.7e-08  Score=84.71  Aligned_cols=83  Identities=19%  Similarity=0.245  Sum_probs=63.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecCh---hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      .+++|+++|+|| ||+|++++..|++.|++ |++++|+.   +++++..+++......   +.+..+|+.+.+++...++
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~---~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPE---CIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCC---ceeEEechhhhhHHHhhhc
Confidence            457899999999 69999999999999995 99999997   6677777766544322   4556788887766655443


Q ss_pred             HHHhhcCCccEEEcCCcc
Q 023896           79 FIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (275)
                             ..|+|||+...
T Consensus       199 -------~~DilINaTp~  209 (289)
T PRK12548        199 -------SSDILVNATLV  209 (289)
T ss_pred             -------cCCEEEEeCCC
Confidence                   56999998743

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.69  E-value=9.6e-08  Score=81.10  Aligned_cols=161  Identities=14%  Similarity=0.101  Sum_probs=99.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      ++||||||.||++++.+|.+.||+|++..|+.++......             ..   +...+.+..    ..+  ..+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------------~~---v~~~~~~~~----~~~--~~~D   58 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------------PN---VTLWEGLAD----ALT--LGID   58 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------------cc---ccccchhhh----ccc--CCCC
Confidence            5899999999999999999999999999999976433211             00   011122111    111  1799


Q ss_pred             EEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchh
Q 023896           89 ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT  168 (275)
Q Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  168 (275)
                      +|||-||..-...-  ++.+.=+++++.-+..|-.|.+.+..   ...++++.+-+|..|..+..               
T Consensus        59 avINLAG~~I~~rr--Wt~~~K~~i~~SRi~~T~~L~e~I~~---~~~~P~~~isaSAvGyYG~~---------------  118 (297)
T COG1090          59 AVINLAGEPIAERR--WTEKQKEEIRQSRINTTEKLVELIAA---SETKPKVLISASAVGYYGHS---------------  118 (297)
T ss_pred             EEEECCCCcccccc--CCHHHHHHHHHHHhHHHHHHHHHHHh---ccCCCcEEEecceEEEecCC---------------
Confidence            99999997544331  24555555666666666666555533   12335666666666766542               


Q ss_pred             HHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCCeeecC
Q 023896          169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG~v~T~  234 (275)
                                     .+..+.|..+ +       ..-.+..+|+.|-.+.     .++||..+.-|.|-.+
T Consensus       119 ---------------~~~~~tE~~~-~-------g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090         119 ---------------GDRVVTEESP-P-------GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             ---------------CceeeecCCC-C-------CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence                           1122333322 1       2335666777775553     4899999998888653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.67  E-value=5.6e-08  Score=88.58  Aligned_cols=81  Identities=16%  Similarity=0.233  Sum_probs=62.9

Q ss_pred             ccCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEec
Q 023896            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (275)
Q Consensus         3 ~~~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D   66 (275)
                      +++||++|||||                +|++|.++|+.|+.+|++|++++++.. ..        ..     ..+..+|
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~-----~~~~~~d  250 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TP-----AGVKRID  250 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CC-----CCcEEEc
Confidence            468999999999                555999999999999999999998762 11        00     1134679


Q ss_pred             ccChHHHHHHHHHHHhhcCCccEEEcCCcccccc
Q 023896           67 ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWS  100 (275)
Q Consensus        67 l~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~  100 (275)
                      +++.+++.+.++   +.++++|++|||||+....
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            998888766655   5578999999999986554

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.67  E-value=7.1e-07  Score=83.06  Aligned_cols=208  Identities=20%  Similarity=0.137  Sum_probs=128.4

Q ss_pred             CCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~-~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|||||+ +.||.+++.+|++.|++||++..+.. .-.+..+.|...... +..+.+++++.++..+|+.+++.+-
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            57999999998 77999999999999999999876554 444556666643322 2336677899999999999999987


Q ss_pred             hhcC--------------CccEEEcCCcccccchhhccc--hhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           82 TQFG--------------KLDILTKGDAEVDWSKVCYQT--YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        82 ~~~g--------------~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ++.-              .+|.++-.|.+.....+.+..  .|...++|-.|+.-.+--++......--..+-.+|.-.|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence            6432              256777766655444333222  222333344444333333222211100001134565555


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFC  222 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~  222 (275)
                      -.                                           ++-+.+..+|+-+|.+++.++..|..|-   ..+.
T Consensus       555 PN-------------------------------------------rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vs  591 (866)
T COG4982         555 PN-------------------------------------------RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVS  591 (866)
T ss_pred             CC-------------------------------------------CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHH
Confidence            33                                           1222557899999999999999888774   2344


Q ss_pred             EEeecCCeee-cCCcCCC------------CCCChhhhhccceeec
Q 023896          223 VNCVCPGFVK-TDINFHA------------GILSVEEGAESPVKLA  255 (275)
Q Consensus       223 vn~v~pG~v~-T~~~~~~------------~~~~~~~~a~~~~~~~  255 (275)
                      +..-.-||+. |.++...            ..++.+|.+..++.+.
T Consensus       592 l~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV~tyS~~EmA~~LLgL~  637 (866)
T COG4982         592 LAHALIGWTRGTGLMGHNDIIVAAIEKAGVRTYSTDEMAFNLLGLA  637 (866)
T ss_pred             HhhhheeeeccccccCCcchhHHHHHHhCceecCHHHHHHHHHhhc
Confidence            4445568884 6654322            1356666666655544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.67  E-value=3.6e-07  Score=85.02  Aligned_cols=122  Identities=16%  Similarity=0.095  Sum_probs=84.7

Q ss_pred             EecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCccEE
Q 023896           11 VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL   90 (275)
Q Consensus        11 ItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   90 (275)
                      |+||++|+|.++++.|...|++|+.+.+...+.         ......++..+.+|.+.....+.+              
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------~~~~~~~~~~~~~d~~~~~~~~~l--------------   99 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------AAGWGDRFGALVFDATGITDPADL--------------   99 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc---------ccCcCCcccEEEEECCCCCCHHHH--------------
Confidence            888899999999999999999999887655411         000011133333444443332221              


Q ss_pred             EcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHH
Q 023896           91 TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEE  170 (275)
Q Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  170 (275)
                                                  .+.+.+++..++.|.  +.|+||+++|..+..                    
T Consensus       100 ----------------------------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~--------------------  129 (450)
T PRK08261        100 ----------------------------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAA--------------------  129 (450)
T ss_pred             ----------------------------HHHHHHHHHHHHhcc--CCCEEEEEccccccC--------------------
Confidence                                        123355666777774  457999999965432                    


Q ss_pred             HHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCe
Q 023896          171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGF  230 (275)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~  230 (275)
                                               ....|+++|+++.+++|+++.|+ .++++|.|.|++
T Consensus       130 -------------------------~~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        130 -------------------------ADPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             -------------------------CchHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence                                     23469999999999999999999 589999999986

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.64  E-value=8.6e-07  Score=75.05  Aligned_cols=75  Identities=25%  Similarity=0.298  Sum_probs=59.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      |+|+||+|.+|+.+++.|++.+++|.+..|+..+  ...+.++..+     +.++.+|+.+.+++.++++       ++|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g-----~~vv~~d~~~~~~l~~al~-------g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG-----AEVVEADYDDPESLVAALK-------GVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT-----TEEEES-TT-HHHHHHHHT-------TCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc-----ceEeecccCCHHHHHHHHc-------CCc
Confidence            6899999999999999999999999999999843  3334454443     5677999999988877776       899


Q ss_pred             EEEcCCccc
Q 023896           89 ILTKGDAEV   97 (275)
Q Consensus        89 ~li~~ag~~   97 (275)
                      .++++.+..
T Consensus        67 ~v~~~~~~~   75 (233)
T PF05368_consen   67 AVFSVTPPS   75 (233)
T ss_dssp             EEEEESSCS
T ss_pred             eEEeecCcc
Confidence            999887754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.62  E-value=3.8e-07  Score=75.23  Aligned_cols=82  Identities=28%  Similarity=0.285  Sum_probs=65.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+.++++...+.+.....    .....+|+.+.+++.+.++    
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----EGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----CcEEEeeCCCHHHHHHHHh----
Confidence            46789999999999999999999999999999999999888887776653321    3355678888777666554    


Q ss_pred             hcCCccEEEcCCc
Q 023896           83 QFGKLDILTKGDA   95 (275)
Q Consensus        83 ~~g~id~li~~ag   95 (275)
                         +.|++|++..
T Consensus        97 ---~~diVi~at~  106 (194)
T cd01078          97 ---GADVVFAAGA  106 (194)
T ss_pred             ---cCCEEEECCC
Confidence               6798888654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.61  E-value=3.5e-07  Score=90.05  Aligned_cols=174  Identities=17%  Similarity=0.173  Sum_probs=133.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHH---HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGL---EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .|.++|+||=||.|.+++..|..+|+ ++++++|+--+..   ...+.....+-.   +.+-..|++......+++++. 
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVq---V~vsT~nitt~~ga~~Li~~s- 1843 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQ---VQVSTSNITTAEGARGLIEES- 1843 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeE---EEEecccchhhhhHHHHHHHh-
Confidence            57899999999999999999999998 5889998764421   222333444432   556667888888888888755 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .+.+.+..++|-|.+.-..-+++++++.|.+.-+..++++.+|-+...++-..  -.-+|..||+.+-++.         
T Consensus      1844 ~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN--------- 1912 (2376)
T KOG1202|consen 1844 NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGN--------- 1912 (2376)
T ss_pred             hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCC---------
Confidence            45688999999988877777889999999999999999999987765443321  2378888887766665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeec
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVC  227 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~  227 (275)
                                                       .+...|+.+..+++-++.--+.+- ||+-|-+=.
T Consensus      1913 ---------------------------------~GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGA 1946 (2376)
T KOG1202|consen 1913 ---------------------------------AGQTNYGLANSAMERICEQRRHEGFPGTAIQWGA 1946 (2376)
T ss_pred             ---------------------------------CcccccchhhHHHHHHHHHhhhcCCCcceeeeec
Confidence                                             678899999999999998766663 887776544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.54  E-value=6e-07  Score=76.00  Aligned_cols=100  Identities=17%  Similarity=0.159  Sum_probs=68.1

Q ss_pred             CEEEEecCCC-chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNK-GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~-gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+-.||+.++ +||++++++|+++|++|++++|+...        .....  ..+.++.+     ++...+.+.+.+.++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~~--~~v~~i~v-----~s~~~m~~~l~~~~~   80 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEPH--PNLSIIEI-----ENVDDLLETLEPLVK   80 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCCC--CCeEEEEE-----ecHHHHHHHHHHHhc
Confidence            3455666555 59999999999999999999876421        00000  11444443     233334444445556


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccH
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT  121 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~  121 (275)
                      .+|++||+||+....+....+.+++.+++++|.+..
T Consensus        81 ~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         81 DHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            899999999987766666677889999988877665

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.41  E-value=3.9e-07  Score=82.79  Aligned_cols=111  Identities=13%  Similarity=0.115  Sum_probs=79.4

Q ss_pred             ccCCCEEEEecC---------------CCc-hhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEec
Q 023896            3 EATKKYAVVTGS---------------NKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (275)
Q Consensus         3 ~~~~k~vlItGa---------------~~g-IG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D   66 (275)
                      +++||++|||||               |+| +|.++++.|..+|++|++++++....         ..     .....+|
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~-----~~~~~~~  247 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TP-----PGVKSIK  247 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CC-----CCcEEEE
Confidence            468999999999               556 99999999999999999988766321         11     1124579


Q ss_pred             ccChHHH-HHHHHHHHhhcCCccEEEcCCcccccchhhc--cchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           67 ISDLASV-SSLADFIKTQFGKLDILTKGDAEVDWSKVCY--QTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        67 l~~~~~v-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                      +++.+++ +.++++   .++++|++|+|||+....+...  ...+...+.+.+|+..+--+++.+..
T Consensus       248 v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       248 VSTAEEMLEAALNE---LAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             eccHHHHHHHHHHh---hcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            9988887 445433   3478999999999876654321  11222234567888888888887764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.38  E-value=5.8e-06  Score=71.24  Aligned_cols=74  Identities=20%  Similarity=0.143  Sum_probs=61.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +.+|||||||.+|.+++++|.++|++|.+..|+.+++....       ..   +.+...|+.+..++...++       +
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~---v~~~~~d~~~~~~l~~a~~-------G   63 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GG---VEVVLGDLRDPKSLVAGAK-------G   63 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CC---cEEEEeccCCHhHHHHHhc-------c
Confidence            36899999999999999999999999999999998766653       11   7888999999998777776       6


Q ss_pred             ccEEEcCCccc
Q 023896           87 LDILTKGDAEV   97 (275)
Q Consensus        87 id~li~~ag~~   97 (275)
                      +|.+++..+..
T Consensus        64 ~~~~~~i~~~~   74 (275)
T COG0702          64 VDGVLLISGLL   74 (275)
T ss_pred             ccEEEEEeccc
Confidence            77777766544

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.30  E-value=1.9e-06  Score=72.06  Aligned_cols=183  Identities=19%  Similarity=0.090  Sum_probs=117.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH-HHHHh--cCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKA--SGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~-~~l~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .|++||||-+|.=|+-++.-|+++||+|..+-|..+...... +-+..  ...+..+....-.|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            468999999999999999999999999998877555443322 22211  1111234667778999999999999877  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         +++-+.|-|......    .+.+--+-+-++...|++.|+.++...-.. .+-++--.|++. ..+           
T Consensus       106 ---kPtEiYnLaAQSHVk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~-~~VrfYQAstSE-lyG-----------  165 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLT-EKVRFYQASTSE-LYG-----------  165 (376)
T ss_pred             ---CchhhhhhhhhcceE----EEeecccceeeccchhhhhHHHHHHhcCcc-cceeEEecccHh-hcc-----------
Confidence               567777766654432    233334455567888999999887543211 112333333311 111           


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPG  229 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG  229 (275)
                                         +-.+.+-++..+.-+.++|+++|....-++-.++..|     .||-+|.=+|-
T Consensus       166 -------------------kv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  166 -------------------KVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             -------------------cccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence                               1111223445666778999999998877666666555     46777776663

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.28  E-value=9.4e-06  Score=75.57  Aligned_cols=79  Identities=22%  Similarity=0.227  Sum_probs=59.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|+++|+|+++ +|.++++.|+++|++|++++++. +..+...+++...+     +.++..|..+            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~------------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG-----IELVLGEYPE------------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-----CEEEeCCcch------------
Confidence            67899999999877 99999999999999999999975 34444444554322     5566677765            


Q ss_pred             hhcCCccEEEcCCccccc
Q 023896           82 TQFGKLDILTKGDAEVDW   99 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~   99 (275)
                      +..+.+|+||+++|....
T Consensus        64 ~~~~~~d~vv~~~g~~~~   81 (450)
T PRK14106         64 EFLEGVDLVVVSPGVPLD   81 (450)
T ss_pred             hHhhcCCEEEECCCCCCC
Confidence            112578999999987543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.28  E-value=1.1e-05  Score=72.89  Aligned_cols=77  Identities=19%  Similarity=0.323  Sum_probs=64.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +.+||.|| |+||+.++..|+++| .+|++.+|+..++.++......      ++.+.++|+.+.+.+.++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------~v~~~~vD~~d~~al~~li~-------   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------KVEALQVDAADVDALVALIK-------   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------cceeEEecccChHHHHHHHh-------
Confidence            46899999 999999999999999 7999999999888777654322      38899999999999888876       


Q ss_pred             CccEEEcCCccc
Q 023896           86 KLDILTKGDAEV   97 (275)
Q Consensus        86 ~id~li~~ag~~   97 (275)
                      ..|++||++...
T Consensus        68 ~~d~VIn~~p~~   79 (389)
T COG1748          68 DFDLVINAAPPF   79 (389)
T ss_pred             cCCEEEEeCCch
Confidence            449999998653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.27  E-value=4.8e-06  Score=71.09  Aligned_cols=168  Identities=15%  Similarity=0.174  Sum_probs=113.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+|-++-|.||||.+|+-++.+|++.|-+||+-.|-.+..-.-++-+.+.    .++.+...|+.|++++++.++    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL----GQvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL----GQVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc----cceeeeccCCCCHHHHHHHHH----
Confidence            556788999999999999999999999999999998554322222222122    238999999999999999988    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         .-+++||-.|--..+.       .+ ..-++|+.++-.+++.+.+    .+--++|-+|+..+....          
T Consensus       130 ---~sNVVINLIGrd~eTk-------nf-~f~Dvn~~~aerlAricke----~GVerfIhvS~Lganv~s----------  184 (391)
T KOG2865|consen  130 ---HSNVVINLIGRDYETK-------NF-SFEDVNVHIAERLARICKE----AGVERFIHVSCLGANVKS----------  184 (391)
T ss_pred             ---hCcEEEEeeccccccC-------Cc-ccccccchHHHHHHHHHHh----hChhheeehhhccccccC----------
Confidence               5589999888543321       11 1235677788777776643    234589999986644221          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchh------hhhhcCCCCCCchhhHhHHHHHHHHHHHHH
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEG------EIANRGWCPHSSAYKVSKAVINAYTRILAK  216 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~  216 (275)
                                   ..+|.++-..+      .+-+..-..+...|+.--..++.++..|.+
T Consensus       185 -------------~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk  231 (391)
T KOG2865|consen  185 -------------PSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRK  231 (391)
T ss_pred             -------------hHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHh
Confidence                         01122222222      233334445677899888999988888875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.22  E-value=3.4e-05  Score=61.94  Aligned_cols=105  Identities=22%  Similarity=0.219  Sum_probs=77.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      .+-|.||+|-.|+.+.++..++||.|+.+.||+.+....           +.+.+.+.|+.+..++.+.+.       ..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeecccccChhhhHhhhc-------CC
Confidence            577899999999999999999999999999999764332           116788999999998766655       78


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                      |+||..-|.....     ..+.           +....+.++..++..+..|+++++..
T Consensus        64 DaVIsA~~~~~~~-----~~~~-----------~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          64 DAVISAFGAGASD-----NDEL-----------HSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             ceEEEeccCCCCC-----hhHH-----------HHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            9999987654221     1111           11125556666665567899999883

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.14  E-value=1.7e-05  Score=61.56  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=58.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++++++|.|+ ||.|++++..|++.|++ |.++.|+.+++++..+.+....     +.+  .++.+..   +..   
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-----~~~--~~~~~~~---~~~---   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-----IEA--IPLEDLE---EAL---   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-----EEE--EEGGGHC---HHH---
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-----cce--eeHHHHH---HHH---
Confidence            3678999999998 99999999999999985 9999999999999888872211     333  3333322   222   


Q ss_pred             HhhcCCccEEEcCCccc
Q 023896           81 KTQFGKLDILTKGDAEV   97 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~   97 (275)
                          .+.|++|++.+..
T Consensus        74 ----~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 ----QEADIVINATPSG   86 (135)
T ss_dssp             ----HTESEEEE-SSTT
T ss_pred             ----hhCCeEEEecCCC
Confidence                2789999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.14  E-value=3e-05  Score=64.22  Aligned_cols=164  Identities=17%  Similarity=0.146  Sum_probs=100.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++||||++|-+|+++.+.+.++|.   +.++.+.                        -.+||++..+++++++..   
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------kd~DLt~~a~t~~lF~~e---   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------KDADLTNLADTRALFESE---   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------ccccccchHHHHHHHhcc---
Confidence            6899999999999999999998764   2222221                        137999999999999866   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++..+||.|+.... .+...+  ---+.+..|+.-.-++++.+..+    +-.++++..|. ++.|..          
T Consensus        55 --kPthVIhlAAmVGG-lf~N~~--ynldF~r~Nl~indNVlhsa~e~----gv~K~vsclSt-CIfPdk----------  114 (315)
T KOG1431|consen   55 --KPTHVIHLAAMVGG-LFHNNT--YNLDFIRKNLQINDNVLHSAHEH----GVKKVVSCLST-CIFPDK----------  114 (315)
T ss_pred             --CCceeeehHhhhcc-hhhcCC--CchHHHhhcceechhHHHHHHHh----chhhhhhhcce-eecCCC----------
Confidence              67888887743221 111111  11233555666666667766542    33355665552 333321          


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                      ..++.++..--.+++ +....|+-+|+.+.-..+.++.++ +-...++.|..+..|
T Consensus       115 ----------------t~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh-g~~~tsviPtNvfGp  169 (315)
T KOG1431|consen  115 ----------------TSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH-GRDYTSVIPTNVFGP  169 (315)
T ss_pred             ----------------CCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh-CCceeeeccccccCC
Confidence                            122233333333333 667789999998888888888875 444555555555443

>PLN00106 malate dehydrogenase

Probab=98.13  E-value=1.7e-05  Score=70.47  Aligned_cols=159  Identities=13%  Similarity=0.035  Sum_probs=97.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .++|+|+|++|.+|..++..|+..+.  +++++++++  .+..+.++.+....   .  ...++++.+++...+      
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~---~--~i~~~~~~~d~~~~l------   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTP---A--QVRGFLGDDQLGDAL------   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcC---c--eEEEEeCCCCHHHHc------
Confidence            46899999999999999999997664  799999988  22222344432211   1  223444444433333      


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec-CccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS-YVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS-~~~~~~~~~~~~~~~~~  162 (275)
                       ...|++|+.||.....      ...+++.+..|+-....+.+.+.+    ....++++++| -.-...           
T Consensus        85 -~~aDiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i~~----~~p~aivivvSNPvD~~~-----------  142 (323)
T PLN00106         85 -KGADLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAVAK----HCPNALVNIISNPVNSTV-----------  142 (323)
T ss_pred             -CCCCEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEeCCCccccH-----------
Confidence             3799999999975432      234677788888887777766654    33345666666 110000           


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                             ...++            .+.....+++...|+.++.-..-+...++.++
T Consensus       143 -------~i~t~------------~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~l  179 (323)
T PLN00106        143 -------PIAAE------------VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKK  179 (323)
T ss_pred             -------HHHHH------------HHHHcCCCCcceEEEEecchHHHHHHHHHHHh
Confidence                   00000            01223444677899999866666777778776

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.11  E-value=3.5e-05  Score=69.81  Aligned_cols=129  Identities=21%  Similarity=0.212  Sum_probs=83.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~   83 (275)
                      +-.+|+|+||+|++|+-+++.|.++|+.|....|+.++.+.... +...  . .....+..|.....+ ..++++.+   
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d-~~~~~v~~~~~~~~d~~~~~~~~~---  150 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--D-LGLQNVEADVVTAIDILKKLVEAV---  150 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--c-cccceeeeccccccchhhhhhhhc---
Confidence            45789999999999999999999999999999999998877765 1111  1 113334444444333 33333322   


Q ss_pred             cC-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           84 FG-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        84 ~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                       + ...+++.++|..+...       +..-...+.+.|+.++++++..    .+-.+++.+||+.+....
T Consensus       151 -~~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~  208 (411)
T KOG1203|consen  151 -PKGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFN  208 (411)
T ss_pred             -cccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccC
Confidence             2 3456666665443221       2223345667789999988833    345699999998876543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.03  E-value=2.3e-05  Score=71.51  Aligned_cols=76  Identities=24%  Similarity=0.328  Sum_probs=58.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            9 AVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++.     ..++...++|+.|.+++.++++       +
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~l~~~~~-------~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-----GDRVEAVQVDVNDPESLAELLR-------G   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-----TTTEEEEE--TTTHHHHHHHHT-------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-----ccceeEEEEecCCHHHHHHHHh-------c
Confidence            689999 9999999999999874  89999999999888876651     2238999999999999877776       5


Q ss_pred             ccEEEcCCccc
Q 023896           87 LDILTKGDAEV   97 (275)
Q Consensus        87 id~li~~ag~~   97 (275)
                      .|++||++|..
T Consensus        68 ~dvVin~~gp~   78 (386)
T PF03435_consen   68 CDVVINCAGPF   78 (386)
T ss_dssp             SSEEEE-SSGG
T ss_pred             CCEEEECCccc
Confidence            69999999865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.01  E-value=1.4e-05  Score=67.56  Aligned_cols=86  Identities=20%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             cCCCEEEEecCC----------------CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecc
Q 023896            4 ATKKYAVVTGSN----------------KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (275)
Q Consensus         4 ~~~k~vlItGa~----------------~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl   67 (275)
                      ++||+||||+|.                |.+|+++|++|+.+|++|+++++.......   .+    .....+..+..| 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~----~~~~~~~~V~s~-   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI----NNQLELHPFEGI-   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc----CCceeEEEEecH-
Confidence            479999999886                999999999999999999988764321000   00    001012223221 


Q ss_pred             cChHHHHHHHHHHHhhcCCccEEEcCCcccccch
Q 023896           68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (275)
                         .+....++++.+. .++|++||.|++..+.+
T Consensus        73 ---~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         73 ---IDLQDKMKSIITH-EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             ---HHHHHHHHHHhcc-cCCCEEEECccccceec
Confidence               1222222222211 26899999999876654

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.95  E-value=4.1e-05  Score=68.22  Aligned_cols=74  Identities=26%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHC-C-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASK-G-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~-g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++++|+|+||||+|.||+.++++|+.+ | .+++++.|+..++....+++..            .|+.   ++.      
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~---~l~------  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKIL---SLE------  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHH---hHH------
Confidence            468899999999999999999999864 5 5899999998877766554321            1221   122      


Q ss_pred             HhhcCCccEEEcCCcccc
Q 023896           81 KTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~   98 (275)
                       +.+...|++++.++...
T Consensus       211 -~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 -EALPEADIVVWVASMPK  227 (340)
T ss_pred             -HHHccCCEEEECCcCCc
Confidence             22347899999988643

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.94  E-value=4.3e-05  Score=67.23  Aligned_cols=82  Identities=20%  Similarity=0.237  Sum_probs=70.1

Q ss_pred             EEEecCCCchhHHHHHHHHH----CCCEEEEEecChhHHHHHHHHHHhcCCC--CCceeEEEecccChHHHHHHHHHHHh
Q 023896            9 AVVTGSNKGIGFETVRQLAS----KGITVVLTARDEKRGLEAVEKLKASGVD--PELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~----~g~~vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++|.||+|.-|.-++.++++    .+..+-+.+||++++++.++++.+..+.  .+.+ ++.+|.+|++++.+++++   
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh---
Confidence            89999999999999999999    7889999999999999999988876533  2334 788999999999999884   


Q ss_pred             hcCCccEEEcCCcccc
Q 023896           83 QFGKLDILTKGDAEVD   98 (275)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (275)
                          ..+++|++|..-
T Consensus        84 ----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 ----ARVIVNCVGPYR   95 (423)
T ss_pred             ----hEEEEeccccce
Confidence                478999988643

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.92  E-value=6.2e-05  Score=66.80  Aligned_cols=117  Identities=14%  Similarity=-0.009  Sum_probs=76.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.++++|+|++|.||..++..|+..+  .++++++++.  ++..+.++.+...     .....++++..+..+.++    
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~-----~~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT-----PAKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc-----CceEEEecCCCchHHHhC----
Confidence            45789999999999999999999655  5899999933  2222234443221     122345555444333333    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                         ..|++|+++|....      ..+.+.+.+..|+.....+++++.+    ++..++|+++|
T Consensus        76 ---gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~S  125 (321)
T PTZ00325         76 ---GADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVS  125 (321)
T ss_pred             ---CCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEec
Confidence               78999999997432      1234667788888777776666544    44457888777

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.79  E-value=0.00018  Score=66.87  Aligned_cols=83  Identities=17%  Similarity=0.172  Sum_probs=55.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|+++|||+++ +|+++++.|++.|++|++.+++........+++...+     +.+....  +...+   .+   
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g-----~~~~~~~--~~~~~---~~---   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG-----IKVICGS--HPLEL---LD---   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC-----CEEEeCC--CCHHH---hc---
Confidence            457899999999976 9999999999999999999987644333344454432     2222111  11111   11   


Q ss_pred             hhcCCccEEEcCCcccccch
Q 023896           82 TQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~  101 (275)
                         ..+|+||+++|+....+
T Consensus        67 ---~~~d~vV~s~gi~~~~~   83 (447)
T PRK02472         67 ---EDFDLMVKNPGIPYTNP   83 (447)
T ss_pred             ---CcCCEEEECCCCCCCCH
Confidence               14899999999865543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.76  E-value=8.5e-05  Score=66.20  Aligned_cols=115  Identities=13%  Similarity=0.070  Sum_probs=65.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-------CEEEEEecChhH--HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g-------~~vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++||||+|.+|..++..|+..+       .+|++.+++...  ++....++.+..      .....|+....+..    
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~------~~~~~~~~~~~~~~----   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA------FPLLKSVVATTDPE----   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc------ccccCCceecCCHH----
Confidence            58999999999999999999844       589999996531  222111221110      01111332222222    


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC--CCCeEEEEec
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSS  145 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~vsS  145 (275)
                         +.+...|++|+.||.....   ..+   -.+.++.|+.    +++.+.+.+.+.  +.+.+|++|.
T Consensus        74 ---~~l~~aDiVI~tAG~~~~~---~~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          74 ---EAFKDVDVAILVGAMPRKE---GME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             ---HHhCCCCEEEEeCCcCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence               2224799999999975432   123   2445556654    344444444444  2566677665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.60  E-value=6.3e-05  Score=62.69  Aligned_cols=168  Identities=18%  Similarity=0.159  Sum_probs=101.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC-CC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASK-GI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~-g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+|||||+-|.+|.++++.|-.. |- .||+.+.-...     +...+.      --++-.|+.|..++++++-.    
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~~------GPyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTDV------GPYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhccc------CCchhhhhhccccHHHhhcc----
Confidence            478999999999999999988754 54 57776632221     111111      11455788888887777642    


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC-CCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK-DLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~-~~~~~~~~~~~  162 (275)
                       .+||-++|-.+....-     .....-...++|+.|..++++....+      .-=+|+-|..|..+ +.+ .     +
T Consensus       109 -~RIdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSP-R-----N  170 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSP-R-----N  170 (366)
T ss_pred             -cccceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCC-C-----C
Confidence             2899999965432221     11222345688999999999877542      23355555444433 321 0     0


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEee-cCCee
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCV-CPGFV  231 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v-~pG~v  231 (275)
                      ..+                        +-.-..+...|++||.-.+.+-+++...+ ++.+.++ .||.+
T Consensus       171 PTP------------------------dltIQRPRTIYGVSKVHAEL~GEy~~hrF-g~dfr~~rfPg~i  215 (366)
T KOG2774|consen  171 PTP------------------------DLTIQRPRTIYGVSKVHAELLGEYFNHRF-GVDFRSMRFPGII  215 (366)
T ss_pred             CCC------------------------CeeeecCceeechhHHHHHHHHHHHHhhc-CccceecccCccc
Confidence            000                        01122567899999999998888877665 3333333 35554

>cd00704 MDH Malate dehydrogenase

Probab=97.55  E-value=0.00054  Score=61.00  Aligned_cols=111  Identities=14%  Similarity=0.084  Sum_probs=64.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------EEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHH----
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVS----   74 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~----   74 (275)
                      +|.|+||+|.+|..++..|+..|.       .+++.+++.  +.+                 .....|+.+.....    
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~-----------------~g~~~Dl~d~~~~~~~~~   64 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL-----------------EGVVMELQDCAFPLLKGV   64 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-----------------ceeeeehhhhcccccCCc
Confidence            579999999999999999997653       499999876  332                 23334444431000    


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC--CCCeEEEEec
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSS  145 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~vsS  145 (275)
                      .+.....+.+...|++|+.||.....   .++   -.+.+..|+    .+++.+.+.+.+.  +.+.+|++|-
T Consensus        65 ~i~~~~~~~~~~aDiVVitAG~~~~~---g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          65 VITTDPEEAFKDVDVAILVGAFPRKP---GME---RADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             EEecChHHHhCCCCEEEEeCCCCCCc---CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            00011223345799999999975332   223   333444444    4555555555544  3455666653

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.53  E-value=0.00059  Score=53.78  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++++++|+|+ |++|.++++.|++.| ++|++++|+.++.+...+++....        +..+..+..+.         
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYLDLEEL---------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeecchhhc---------
Confidence            46789999998 899999999999996 789999999988777666554221        12233333221         


Q ss_pred             hcCCccEEEcCCccc
Q 023896           83 QFGKLDILTKGDAEV   97 (275)
Q Consensus        83 ~~g~id~li~~ag~~   97 (275)
                       ....|++|++....
T Consensus        79 -~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 -LAEADLIINTTPVG   92 (155)
T ss_pred             -cccCCEEEeCcCCC
Confidence             24789999988653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.50  E-value=0.00067  Score=58.92  Aligned_cols=47  Identities=15%  Similarity=0.278  Sum_probs=41.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      .+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+...+++..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            4789999999 6999999999999999999999999888887777654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.46  E-value=0.00025  Score=57.97  Aligned_cols=81  Identities=16%  Similarity=0.191  Sum_probs=49.5

Q ss_pred             cCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecc
Q 023896            4 ATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (275)
Q Consensus         4 ~~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl   67 (275)
                      ++||+||||+|                ||-.|.++|+.+..+|++|+++..... ...           +..+..+  ++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-----------p~~~~~i--~v   66 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-----------PPGVKVI--RV   66 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------TTEEEE--E-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-----------cccceEE--Ee
Confidence            47899999987                578999999999999999999887642 110           0013333  34


Q ss_pred             cChHHHHHHHHHHHhhcCCccEEEcCCcccccch
Q 023896           68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (275)
                      .+.++   +.+.+.+.++.-|++|++|++..+.+
T Consensus        67 ~sa~e---m~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   67 ESAEE---MLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             SSHHH---HHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             cchhh---hhhhhccccCcceeEEEecchhheee
Confidence            44444   44445555566699999999877654

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.45  E-value=0.0026  Score=56.10  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|+|+++++|.++++.+...|++|++++++..+.+.+ ..+   +..      ..+|..+.+....+.+....  
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~------~~~~~~~~~~~~~~~~~~~~--  233 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD------YVIDYRKEDFVREVRELTGK--  233 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC------eEEecCChHHHHHHHHHhCC--
Confidence            468999999999999999999999999999999988765443 221   111      12456655555554443322  


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|++++++|.
T Consensus       234 ~~~d~~i~~~g~  245 (342)
T cd08266         234 RGVDVVVEHVGA  245 (342)
T ss_pred             CCCcEEEECCcH
Confidence            369999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.43  E-value=0.00068  Score=54.24  Aligned_cols=156  Identities=15%  Similarity=0.029  Sum_probs=96.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++.++|.||+|-.|..+.+++++.+-  +|+++.|...-..++       ..   .+.....|.+..++....++   
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k---~v~q~~vDf~Kl~~~a~~~q---   82 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DK---VVAQVEVDFSKLSQLATNEQ---   82 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cc---eeeeEEechHHHHHHHhhhc---
Confidence            4677899999999999999999999874  799998864211111       11   14445567777665444433   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ..|+++|+-|..-..       ...+-.+.+..--.+.+++...    +.+...++.+||..+. +          
T Consensus        83 ----g~dV~FcaLgTTRgk-------aGadgfykvDhDyvl~~A~~AK----e~Gck~fvLvSS~GAd-~----------  136 (238)
T KOG4039|consen   83 ----GPDVLFCALGTTRGK-------AGADGFYKVDHDYVLQLAQAAK----EKGCKTFVLVSSAGAD-P----------  136 (238)
T ss_pred             ----CCceEEEeecccccc-------cccCceEeechHHHHHHHHHHH----hCCCeEEEEEeccCCC-c----------
Confidence                789999986642211       0112222233233344444442    2444588999984332 1          


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                       .....|--.|.-++.=+..|--+    ++....||++.-..
T Consensus       137 ---------------------------------sSrFlY~k~KGEvE~~v~eL~F~----~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  137 ---------------------------------SSRFLYMKMKGEVERDVIELDFK----HIIILRPGPLLGER  173 (238)
T ss_pred             ---------------------------------ccceeeeeccchhhhhhhhcccc----EEEEecCcceeccc
Confidence                                             23567888888888655544222    57778999986543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.42  E-value=0.0035  Score=55.68  Aligned_cols=83  Identities=13%  Similarity=0.132  Sum_probs=59.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |++-.++++.|.|+ |++|..++..|+..|.  ++++.+++.+.++..+.++.....-...+.+..   .+       .+
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~-------~~   69 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD-------YS   69 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC-------HH
Confidence            67777899999998 9999999999999886  799999999888887777775421101122221   11       11


Q ss_pred             HHHhhcCCccEEEcCCcccc
Q 023896           79 FIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~   98 (275)
                      .+    ..-|++|..||...
T Consensus        70 ~~----~~adivIitag~~~   85 (315)
T PRK00066         70 DC----KDADLVVITAGAPQ   85 (315)
T ss_pred             Hh----CCCCEEEEecCCCC
Confidence            12    37899999998743

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.35  E-value=0.0048  Score=48.16  Aligned_cols=115  Identities=13%  Similarity=0.167  Sum_probs=73.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCC-CceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDP-ELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.|.|++|.+|..++..|...+.  ++++.+++..+++..+.+++...... ....+..   .+.+.           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            588999999999999999998864  79999999988887777776532111 1122222   22222           2


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ...|++|..+|.....   ..+   -.+.+..|..-.-.+.+.+..+   .+.+.++++|-
T Consensus        68 ~~aDivvitag~~~~~---g~s---R~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP---GMS---RLDLLEANAKIVKEIAKKIAKY---APDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSST---TSS---HHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SS
T ss_pred             ccccEEEEeccccccc---ccc---HHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCC
Confidence            3789999999975332   122   4445666665555555554443   34567777765

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.32  E-value=0.00037  Score=57.79  Aligned_cols=46  Identities=20%  Similarity=0.320  Sum_probs=40.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      +++||+++|.|.+ .+|+.+++.|.+.|++|++.+++.++.+...+.
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            5688999999995 899999999999999999999998776665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05086 malate dehydrogenase; Provisional

Probab=97.26  E-value=0.0018  Score=57.46  Aligned_cols=104  Identities=13%  Similarity=-0.019  Sum_probs=57.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHH---CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~---~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.++|.||+|++|.+++..|..   .++.+++.+|++. .+...-++.....    ...+..  .+.+++.+.+      
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~----~~~i~~--~~~~d~~~~l------   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPT----AVKIKG--FSGEDPTPAL------   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCC----CceEEE--eCCCCHHHHc------
Confidence            4689999999999999998854   3457889998753 2211122322110    111221  1112221112      


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                       ...|++|.++|......      +.-.+.+..|.-..-.+++.+.+
T Consensus        68 -~~~DiVIitaG~~~~~~------~~R~dll~~N~~i~~~ii~~i~~  107 (312)
T PRK05086         68 -EGADVVLISAGVARKPG------MDRSDLFNVNAGIVKNLVEKVAK  107 (312)
T ss_pred             -CCCCEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHH
Confidence             36999999999754321      12344566666555555544433

>PRK06849 hypothetical protein; Provisional

Probab=97.22  E-value=0.003  Score=57.77  Aligned_cols=83  Identities=18%  Similarity=0.099  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.|+|||||++..+|..+++.|.+.|++|++++.+........+.+..       ...++..-.+.+.....+.++.++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~-------~~~~p~p~~d~~~~~~~L~~i~~~~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDG-------FYTIPSPRWDPDAYIQALLSIVQRE   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhh-------eEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999886544322222211       2222112233333333333344443


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                       ++|++|....
T Consensus        76 -~id~vIP~~e   85 (389)
T PRK06849         76 -NIDLLIPTCE   85 (389)
T ss_pred             -CCCEEEECCh
Confidence             5898887653

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.19  E-value=0.001  Score=58.03  Aligned_cols=48  Identities=17%  Similarity=0.255  Sum_probs=42.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~   51 (275)
                      .+++|+++|+|+ ||+|++++..|+..| .+|++++|+.++++...+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            356899999997 999999999999999 689999999998887777664

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.17  E-value=0.0047  Score=56.15  Aligned_cols=75  Identities=12%  Similarity=0.082  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|.|+ |.+|+..++.+...|++|++++|+..+++...+.+.    .     .+..+..+.+.+.+.+       
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g----~-----~v~~~~~~~~~l~~~l-------  228 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG----G-----RIHTRYSNAYEIEDAV-------  228 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC----c-----eeEeccCCHHHHHHHH-------
Confidence            4567899988 799999999999999999999999877655433221    1     1223344444433332       


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      ...|++|++++.
T Consensus       229 ~~aDvVI~a~~~  240 (370)
T TIGR00518       229 KRADLLIGAVLI  240 (370)
T ss_pred             ccCCEEEEcccc
Confidence            367999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.17  E-value=0.0026  Score=56.24  Aligned_cols=77  Identities=17%  Similarity=0.192  Sum_probs=53.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++.|.|+ |++|..++..|+..|  ++|++++|+.++++....++.+.... ........   .+.+       .+   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~-------~l---   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS-------DC---   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH-------Hh---
Confidence            36788896 899999999999999  58999999999888877777643211 00011211   1211       11   


Q ss_pred             cCCccEEEcCCcccc
Q 023896           84 FGKLDILTKGDAEVD   98 (275)
Q Consensus        84 ~g~id~li~~ag~~~   98 (275)
                       ...|++|+.+|...
T Consensus        67 -~~aDIVIitag~~~   80 (306)
T cd05291          67 -KDADIVVITAGAPQ   80 (306)
T ss_pred             -CCCCEEEEccCCCC
Confidence             37899999998743

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.15  E-value=0.008  Score=56.64  Aligned_cols=111  Identities=14%  Similarity=0.177  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-------------H
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-------------A   71 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-------------~   71 (275)
                      .+.+|+|+|+ |.+|...+..+...|++|++++++..+++...+ +   +     ..++..|..+.             +
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---G-----A~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---G-----AEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C-----CeEEEeccccccccccchhhhcchh
Confidence            4788999998 899999999999999999999999987665533 3   2     22222333221             1


Q ss_pred             HHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           72 SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                      ..++..+.+.+.....|++|.++|.....                   .+..+.+..+..|+  ++|.|+.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~-------------------aP~lit~~~v~~mk--pGgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKP-------------------APKLITAEMVASMK--PGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCccc-------------------CcchHHHHHHHhcC--CCCEEEEEccC
Confidence            11111222222335799999999874421                   12223456666674  56788888763

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.15  E-value=0.00097  Score=63.39  Aligned_cols=46  Identities=28%  Similarity=0.344  Sum_probs=41.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++...+++
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            56899999999 69999999999999999999999988887776654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.10  E-value=0.0036  Score=54.79  Aligned_cols=49  Identities=22%  Similarity=0.331  Sum_probs=43.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhc
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS   53 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~   53 (275)
                      .++|+++|.|+ ||.|++++..|+..|. +|++++|+.++++..++.+...
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            46789999998 8899999999999998 7999999999999888887654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.08  E-value=0.004  Score=55.86  Aligned_cols=83  Identities=17%  Similarity=0.329  Sum_probs=57.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh---------------------hHHHHHHHHHHhcCCCCCce
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---------------------KRGLEAVEKLKASGVDPELL   60 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   60 (275)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++++.                     .+++.+++.+++.... ..+
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~-v~i   98 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE-VEI   98 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC-cEE
Confidence            456889999998 7899999999999998 899998874                     2445555666655433 225


Q ss_pred             eEEEecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           61 LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        61 ~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      ..+..|++. +.+++++       ...|++|.+..
T Consensus        99 ~~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            566667653 3333332       36788888753

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.08  E-value=0.0031  Score=56.28  Aligned_cols=80  Identities=15%  Similarity=0.113  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+.+.   ..      ..+|..+.++..+.+.+...  
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG---a~------~vi~~~~~~~~~~~i~~~~~--  219 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG---FD------DAFNYKEEPDLDAALKRYFP--  219 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---Cc------eeEEcCCcccHHHHHHHhCC--
Confidence            47899999999999999988777889999999998877555543231   11      11333333333333333322  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|+++.+.|
T Consensus       220 ~gvd~v~d~~g  230 (338)
T cd08295         220 NGIDIYFDNVG  230 (338)
T ss_pred             CCcEEEEECCC
Confidence            36999998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.07  E-value=0.0031  Score=56.29  Aligned_cols=77  Identities=17%  Similarity=0.312  Sum_probs=52.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +.+|||+||+||+|...++-+...|+.++++..+.++.+ .+++   .+..      ...|..+++    +.+++++..+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd------~vi~y~~~~----~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGAD------HVINYREED----FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCC------EEEcCCccc----HHHHHHHHcC
Confidence            789999999999999998888888977777666665544 3333   2222      234455544    3444444332


Q ss_pred             --CccEEEcCCcc
Q 023896           86 --KLDILTKGDAE   96 (275)
Q Consensus        86 --~id~li~~ag~   96 (275)
                        .+|+++...|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence              59999998774

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.06  E-value=0.008  Score=66.45  Aligned_cols=181  Identities=12%  Similarity=0.014  Sum_probs=105.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++.++|++.+++++.+++.+|.++|+.|+++.... ..   .+........   +..+.+.-.+..++..+++.+.+..
T Consensus      1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~-~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPW-VV---SHSASPLASA---IASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccc-cc---cccccccccc---cccccccccchHHHHHHHHhhhccc
Confidence            467788888899999999999999999988764221 10   0000001111   2233444455667777777777777


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++++.+||..+...... ...+...+.+.-..-+...|.++|.+.+.+...+++.++.+|...|-.+..+.+.       
T Consensus      1827 ~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~------- 1898 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDA------- 1898 (2582)
T ss_pred             cccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccc-------
Confidence            88999998665432100 0000000111111234456888888877766556678999999877655311000       


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVC  227 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~  227 (275)
                                             ..  .+ .. .--....+++.+|+|+++.|||++.+-.|.
T Consensus      1899 -----------------------~~--~~-~~-~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vD 1934 (2582)
T TIGR02813      1899 -----------------------DS--GT-QQ-VKAELNQAALAGLTKTLNHEWNAVFCRALD 1934 (2582)
T ss_pred             -----------------------cc--cc-cc-cccchhhhhHHHHHHhHHHHCCCCeEEEEe
Confidence                                   00  00 00 001335789999999999999886665544

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.03  E-value=0.0018  Score=56.82  Aligned_cols=82  Identities=15%  Similarity=0.145  Sum_probs=63.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +..-.-++|-||+|.-|.-++++|+.+|.+..+.+||..++....+.|...      ...+++.+  ++.++++..    
T Consensus         3 ~e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~------~~~~p~~~--p~~~~~~~~----   70 (382)
T COG3268           3 MEREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE------AAVFPLGV--PAALEAMAS----   70 (382)
T ss_pred             CCcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc------ccccCCCC--HHHHHHHHh----
Confidence            334466899999999999999999999999999999999999888776432      33344443  555555544    


Q ss_pred             hcCCccEEEcCCccccc
Q 023896           83 QFGKLDILTKGDAEVDW   99 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~   99 (275)
                         +.++|+|++|....
T Consensus        71 ---~~~VVlncvGPyt~   84 (382)
T COG3268          71 ---RTQVVLNCVGPYTR   84 (382)
T ss_pred             ---cceEEEeccccccc
Confidence               78999999997543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.01  E-value=0.0039  Score=56.07  Aligned_cols=80  Identities=14%  Similarity=0.085  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+++.   ..      ...|..+.+++.+.+.+...  
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG---a~------~vi~~~~~~~~~~~i~~~~~--  226 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FD------EAFNYKEEPDLDAALKRYFP--  226 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC---CC------EEEECCCcccHHHHHHHHCC--
Confidence            47899999999999999988877889999999988877555433332   11      12233333233333333322  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +.+|+++.+.|
T Consensus       227 ~gvD~v~d~vG  237 (348)
T PLN03154        227 EGIDIYFDNVG  237 (348)
T ss_pred             CCcEEEEECCC
Confidence            36899999877

>PRK14968 putative methyltransferase; Provisional

Probab=97.01  E-value=0.018  Score=46.59  Aligned_cols=124  Identities=15%  Similarity=0.070  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++|-.|++.|.   ++..|+..+.+|+.+++++...+...+.+.........+.++..|+.+.         +.+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            56788888887666   5555666688999999998877776666554332221266677776432         111  


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccH---HHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT---KQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~---~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ..+|.++.|.......+.. ...+.+...+..+..+.   -.+++.+.+.|+  ++|.++++.+
T Consensus        89 ~~~d~vi~n~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk--~gG~~~~~~~  149 (188)
T PRK14968         89 DKFDVILFNPPYLPTEEEE-EWDDWLNYALSGGKDGREVIDRFLDEVGRYLK--PGGRILLLQS  149 (188)
T ss_pred             cCceEEEECCCcCCCCchh-hhhhhhhhhhccCcChHHHHHHHHHHHHHhcC--CCeEEEEEEc
Confidence            2689999987654432211 11222222332222222   235666667774  4566666544

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.00  E-value=0.0043  Score=55.30  Aligned_cols=113  Identities=15%  Similarity=0.058  Sum_probs=64.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHH-H-H--
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVS-S-L--   76 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~-~-~--   76 (275)
                      +|.|+||+|.+|..++..|+..+.       .+++.++++....               ......|+.+..... . .  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~---------------a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV---------------LEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc---------------cceeEeehhcccchhcCceec
Confidence            478999999999999999997553       5999998654200               222344444443110 0 0  


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC--CCCeEEEEec
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSS  145 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~vsS  145 (275)
                      .....+.+...|++|+.||.....      .+.+.+.+..|+.    +++.+.+.+.+.  +.+.+|++|-
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~~~------~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPRKE------GMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCCCC------CCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            001123345799999999975331      1234555565654    444444444443  3355555554

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.00  E-value=0.0044  Score=51.43  Aligned_cols=83  Identities=17%  Similarity=0.271  Sum_probs=54.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC-------------------hhHHHHHHHHHHhcCCCCCceeE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLF   62 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (275)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+..++.+++.... ..+..
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~i~~   95 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSD-IQVTA   95 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCC-CEEEE
Confidence            457888999986 8999999999999997 89999877                   23455555666554332 12334


Q ss_pred             EEecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        63 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      +..++.+ +.+.+++       ...|++|.+..
T Consensus        96 ~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            4334432 2322222       36788887754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.99  E-value=0.0074  Score=52.44  Aligned_cols=106  Identities=19%  Similarity=0.150  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|+|++|+|..|.-+..----+|++|+.++-..++..-+.+++.   .+      ..+|-..+    .+.+++.+..
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD------~~idyk~~----d~~~~L~~a~  216 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FD------AGIDYKAE----DFAQALKEAC  216 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cc------eeeecCcc----cHHHHHHHHC
Confidence            48999999999999987655444569999999988887666655442   11      23455555    3344555555


Q ss_pred             C-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC
Q 023896           85 G-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK  151 (275)
Q Consensus        85 g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  151 (275)
                      | .||+.+-|.|...                          +.+.++.|  +..+||+..+-++....
T Consensus       217 P~GIDvyfeNVGg~v--------------------------~DAv~~~l--n~~aRi~~CG~IS~YN~  256 (340)
T COG2130         217 PKGIDVYFENVGGEV--------------------------LDAVLPLL--NLFARIPVCGAISQYNA  256 (340)
T ss_pred             CCCeEEEEEcCCchH--------------------------HHHHHHhh--ccccceeeeeehhhcCC
Confidence            5 7999999988532                          23566666  34679998888776644

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.96  E-value=0.0059  Score=53.36  Aligned_cols=48  Identities=19%  Similarity=0.325  Sum_probs=42.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      .++|+++|.|| ||-|++++..|++.|+ +|.+..|+.++++.+++.+..
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            46789999998 9999999999999997 789999999998888777653

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.92  E-value=0.0042  Score=54.28  Aligned_cols=47  Identities=21%  Similarity=0.218  Sum_probs=41.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~   51 (275)
                      +++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++++.+++.+.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            56889999987 9999999999999997 79999999999888877664

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0041  Score=54.17  Aligned_cols=49  Identities=22%  Similarity=0.318  Sum_probs=43.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcC
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASG   54 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~   54 (275)
                      ++++++|.|| ||-+++++..|++.|. +|+++.|+.++++++++.+...+
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            4789999998 8999999999999995 89999999999999988877654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.91  E-value=0.012  Score=52.33  Aligned_cols=155  Identities=15%  Similarity=0.079  Sum_probs=91.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChh--HHHHHHHHHHhcCCCC-CceeEEEecccChHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDP-ELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~--~~~~~~~~l~~~~~~~-~~~~~~~~Dl~~~~~v~~~   76 (275)
                      ++|.|+|++|.+|..++..|+..|.       ++++.+.+..  +++..+.++.+....- ..+.     +.. +.    
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~----   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-DP----   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-Cc----
Confidence            5789999999999999999998775       6999998543  3444444554332110 0011     111 11    


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCc
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~  154 (275)
                      .+    .+..-|++|..||.....   .++..   +.+..|+    .+++.+.+.+.+..  .+.+|++|--.-      
T Consensus        73 ~~----~~~daDivvitaG~~~k~---g~tR~---dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD------  132 (322)
T cd01338          73 NV----AFKDADWALLVGAKPRGP---GMERA---DLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCN------  132 (322)
T ss_pred             HH----HhCCCCEEEEeCCCCCCC---CCcHH---HHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHH------
Confidence            11    223789999999974332   22333   3355554    45566666665543  566676664111      


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                                      ..++.....           .+..|....|+.++.-..-+...+++.+
T Consensus       133 ----------------~~t~~~~k~-----------sg~~p~~~ViG~t~LDs~Rl~~~la~~l  169 (322)
T cd01338         133 ----------------TNALIAMKN-----------APDIPPDNFTAMTRLDHNRAKSQLAKKA  169 (322)
T ss_pred             ----------------HHHHHHHHH-----------cCCCChHheEEehHHHHHHHHHHHHHHh
Confidence                            111111111           1123566789999999888999998887

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.90  E-value=0.0054  Score=54.37  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.++||+||+|++|..+++.+...|++|+.++++.++.+.+ +++   +..      ...|..+.+...+.++....  
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~------~vi~~~~~~~~~~~~~~~~~--  205 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFD------VAFNYKTVKSLEETLKKASP--  205 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC------EEEeccccccHHHHHHHhCC--
Confidence            478999999999999998887778899999999888765544 222   211      12333333344444443321  


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|+++.+.|.
T Consensus       206 ~gvdvv~d~~G~  217 (325)
T TIGR02825       206 DGYDCYFDNVGG  217 (325)
T ss_pred             CCeEEEEECCCH
Confidence            369999988763

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.89  E-value=0.018  Score=48.90  Aligned_cols=78  Identities=22%  Similarity=0.307  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+++|+|+++ +|.++++.+...|.+|++++++..+.+.. +.+   +..      ..+|..+.+....+.   ....
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD------HVIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc------eeccCCcCCHHHHHH---HhcC
Confidence            578999999988 99999998888999999999987665443 222   111      112444433333332   1223


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +.+|+++++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            479999998763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.87  E-value=0.0055  Score=53.49  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|+|+++++|.++++.+...|.+|++++++.++.+... ++   +..      ..+|..+.+..+.+.+.. .. 
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~------~~~~~~~~~~~~~~~~~~-~~-  211 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GAD------AVFNYRAEDLADRILAAT-AG-  211 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCC------EEEeCCCcCHHHHHHHHc-CC-
Confidence            5789999999999999999999999999999999887655442 22   111      124555554444443322 11 


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      ..+|++++++|.
T Consensus       212 ~~~d~vi~~~~~  223 (325)
T cd08253         212 QGVDVIIEVLAN  223 (325)
T ss_pred             CceEEEEECCch
Confidence            369999998863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.87  E-value=0.0021  Score=55.32  Aligned_cols=75  Identities=13%  Similarity=0.132  Sum_probs=54.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++||+|||+- |+.+++.|.++|++|+.+.++....+...    ..+     ...+..+..+.+++.+++++.     +
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g-----~~~v~~g~l~~~~l~~~l~~~-----~   65 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ-----ALTVHTGALDPQELREFLKRH-----S   65 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC-----CceEEECCCCHHHHHHHHHhc-----C
Confidence            36999999998 99999999999999999998886433321    111     123445666777766666533     7


Q ss_pred             ccEEEcCCcc
Q 023896           87 LDILTKGDAE   96 (275)
Q Consensus        87 id~li~~ag~   96 (275)
                      +|+||+.+..
T Consensus        66 i~~VIDAtHP   75 (256)
T TIGR00715        66 IDILVDATHP   75 (256)
T ss_pred             CCEEEEcCCH
Confidence            9999998753

This enzyme was found to be a monomer by gel filtration.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.83  E-value=0.0066  Score=54.16  Aligned_cols=78  Identities=14%  Similarity=0.084  Sum_probs=52.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .++||+||+|++|..+++.+...|+ +|+.++++.++.+.+.+++.   ..   .   ..|..+ +++.+.+.++..  +
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---a~---~---vi~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---FD---A---AINYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---Cc---E---EEECCC-CCHHHHHHHHCC--C
Confidence            7999999999999999887777898 79999998877655544332   11   1   123333 223333333322  3


Q ss_pred             CccEEEcCCcc
Q 023896           86 KLDILTKGDAE   96 (275)
Q Consensus        86 ~id~li~~ag~   96 (275)
                      ++|+++.+.|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            69999988763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.81  E-value=0.0096  Score=53.42  Aligned_cols=37  Identities=22%  Similarity=0.421  Sum_probs=32.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .+++++|+|.|+ ||||..++..|+..|. ++++++++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            456788999999 8999999999999998 899999874

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.73  E-value=0.01  Score=51.71  Aligned_cols=80  Identities=15%  Similarity=0.241  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|+|+++++|..+++.+...|++|++++++.++.+.+ +++   +..      ..+|..+.+....+.+ .... 
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~~-~~~~-  206 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD------VAINYRTEDFAEEVKE-ATGG-  206 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC------EEEeCCchhHHHHHHH-HhCC-
Confidence            578999999999999999999999999999999987765544 222   111      1234443333233322 2211 


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|.+++++|.
T Consensus       207 ~~~d~vi~~~g~  218 (323)
T cd05276         207 RGVDVILDMVGG  218 (323)
T ss_pred             CCeEEEEECCch
Confidence            369999999873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.72  E-value=0.0074  Score=55.59  Aligned_cols=76  Identities=14%  Similarity=0.221  Sum_probs=54.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++.+|+++|.|+ ||+|+.+++.|+..|. +++++.|+..+++.+++++..       ...+  +   .++.       .
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-------~~~~--~---~~~l-------~  237 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-------ASAH--Y---LSEL-------P  237 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-------CeEe--c---HHHH-------H
Confidence            467899999999 9999999999999996 799999999887777665421       1111  1   1222       2


Q ss_pred             hhcCCccEEEcCCcccc
Q 023896           82 TQFGKLDILTKGDAEVD   98 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~   98 (275)
                      +.+...|++|++.+...
T Consensus       238 ~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        238 QLIKKADIIIAAVNVLE  254 (414)
T ss_pred             HHhccCCEEEECcCCCC
Confidence            22346899999887543

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.67  E-value=0.029  Score=49.51  Aligned_cols=79  Identities=14%  Similarity=0.072  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+++|.|+++++|.+++..+...|++|+.++++.++.+...+.+.   .    .  ...|..+.+..+. +.+...  
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g---~----~--~~~~~~~~~~~~~-v~~~~~--  212 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG---F----D--AAINYKTPDLAEA-LKEAAP--  212 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC---C----c--eEEecCChhHHHH-HHHhcc--
Confidence            46899999999999999999999999999999988876554433221   1    1  1123333332222 222221  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|+++.+.|
T Consensus       213 ~~~d~vi~~~g  223 (329)
T cd05288         213 DGIDVYFDNVG  223 (329)
T ss_pred             CCceEEEEcch
Confidence            47999998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.61  E-value=0.014  Score=48.85  Aligned_cols=36  Identities=25%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456788999997 8999999999999998 59999877

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.60  E-value=0.012  Score=51.90  Aligned_cols=42  Identities=19%  Similarity=0.325  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|+||++++|.++++.+...|++|+++.++.++.+..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            467899999999999999999999999999999887664443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.59  E-value=0.012  Score=53.74  Aligned_cols=83  Identities=20%  Similarity=0.299  Sum_probs=53.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC-------------------hhHHHHHHHHHHhcCCCCCceeE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLF   62 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (275)
                      .+++++|+|.|+ ||+|..++..|+..|. ++++++++                   ..+.+.+.+.+.+..... .+..
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v-~v~~  209 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDV-QVEA  209 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCC-EEEE
Confidence            356788888876 8999999999999998 79999987                   345555566665543321 1333


Q ss_pred             EEecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        63 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      +...+.+ +.+..++       ...|++|++..
T Consensus       210 ~~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        210 VQERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             EeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence            3333332 2322222       25788887754

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.58  E-value=0.038  Score=52.13  Aligned_cols=112  Identities=15%  Similarity=0.187  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-------------hH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-------------LA   71 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-------------~~   71 (275)
                      .+.+++|.|+ |.+|...+..+...|+.|++++++..+++...+ +   +     ..++..|..+             .+
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---G-----a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---G-----AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C-----CeEEeccccccccccccceeecCHH
Confidence            3568999997 999999999999999999999999987554432 2   1     2233334321             23


Q ss_pred             HHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           72 SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      ..++..+.+.+.....|++|+++-+....                   .+..+.+..+..|+  +++.||.+++-.
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~TalipG~~-------------------aP~Lit~emv~~MK--pGsvIVDlA~d~  287 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIPGKP-------------------APKLITEEMVDSMK--AGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccCCCC-------------------CCeeehHHHHhhCC--CCCEEEEeeeCC
Confidence            33333344444556899999998432211                   22233445556664  457888888744

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.57  E-value=0.01  Score=50.04  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=55.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +.++|-|+ |-+|..+|+.|.+.|+.|++++++.++.++..+.-.       -.+++.+|-++++-++++=      ...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~-------~~~~v~gd~t~~~~L~~ag------i~~   66 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL-------DTHVVIGDATDEDVLEEAG------IDD   66 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc-------ceEEEEecCCCHHHHHhcC------CCc
Confidence            35677777 789999999999999999999999988776443211       1778889999887755541      126


Q ss_pred             ccEEEcCCc
Q 023896           87 LDILTKGDA   95 (275)
Q Consensus        87 id~li~~ag   95 (275)
                      .|+++...|
T Consensus        67 aD~vva~t~   75 (225)
T COG0569          67 ADAVVAATG   75 (225)
T ss_pred             CCEEEEeeC
Confidence            677776654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.57  E-value=0.011  Score=51.81  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=36.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~   45 (275)
                      ++.+++++|.|. |++|+++++.|...|++|++.+|+.++.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            457899999999 779999999999999999999999875443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.54  E-value=0.01  Score=52.54  Aligned_cols=118  Identities=12%  Similarity=0.112  Sum_probs=68.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++.|+|++|.+|..++..|+..|.  +|++++|+.  ++++....++.+...... .. ..+..+.  +.    +.+  
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~-~~-~~i~~~~--d~----~~l--   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAG-ID-AEIKISS--DL----SDV--   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccC-CC-cEEEECC--CH----HHh--
Confidence            3689999999999999999999986  499999965  444443333332100000 00 0111121  11    112  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                        ...|++|.++|.....   ..+   -.+.+..|+--...+.+.+.+..   +.+.+|++++
T Consensus        71 --~~aDiViitag~p~~~---~~~---r~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~n  122 (309)
T cd05294          71 --AGSDIVIITAGVPRKE---GMS---RLDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTN  122 (309)
T ss_pred             --CCCCEEEEecCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCC
Confidence              3789999999864321   122   23445556655555555554432   3467777777

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.50  E-value=0.024  Score=47.96  Aligned_cols=83  Identities=19%  Similarity=0.260  Sum_probs=52.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLF   62 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   62 (275)
                      .+++++|+|.|+ ||+|.++++.|+..|. +++++|.+.                   .+.+.+++.+++.... ..+..
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~i~~   95 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD-VEIEA   95 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC-CEEEE
Confidence            456788999996 8999999999999997 677775332                   2344555555554332 12445


Q ss_pred             EEecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        63 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      +..+++ .+.+.+++       ...|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            544553 23333333       25788887754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.50  E-value=0.061  Score=50.56  Aligned_cols=79  Identities=16%  Similarity=0.060  Sum_probs=52.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++|+|+|.|+ |++|.++++.|.++|++|++++++.. ......+.+...+     +.+...+-..             
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g-----v~~~~~~~~~-------------   74 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG-----ATVRLGPGPT-------------   74 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC-----CEEEECCCcc-------------
Confidence            46789999997 78999999999999999999986543 3333334454433     3332211111             


Q ss_pred             hcCCccEEEcCCcccccch
Q 023896           83 QFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~  101 (275)
                      .....|.+|...|+.+..+
T Consensus        75 ~~~~~D~Vv~s~Gi~~~~~   93 (480)
T PRK01438         75 LPEDTDLVVTSPGWRPDAP   93 (480)
T ss_pred             ccCCCCEEEECCCcCCCCH
Confidence            0135899999999866543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.48  E-value=0.018  Score=50.44  Aligned_cols=47  Identities=21%  Similarity=0.290  Sum_probs=38.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh---hHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---KRGLEAVEKLK   51 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~---~~~~~~~~~l~   51 (275)
                      +++|++||.|+ ||-+++++..|+..|. +|.++.|+.   ++++.+++.+.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            46889999998 6669999999999997 799999995   46666666554

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.46  E-value=0.021  Score=51.64  Aligned_cols=37  Identities=22%  Similarity=0.368  Sum_probs=31.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            456789999998 8999999999999997 788887654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.40  E-value=0.035  Score=47.48  Aligned_cols=36  Identities=28%  Similarity=0.437  Sum_probs=30.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            356789999999 9999999999999996 78887653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.39  E-value=0.023  Score=47.06  Aligned_cols=36  Identities=25%  Similarity=0.412  Sum_probs=32.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .++.++|+|.|+ ||+|..++..|+..|. ++++++++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            457788999998 8999999999999998 79999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.35  E-value=0.027  Score=51.13  Aligned_cols=36  Identities=31%  Similarity=0.541  Sum_probs=31.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456788999988 8999999999999996 88888765

>PRK08328 hypothetical protein; Provisional

Probab=96.35  E-value=0.027  Score=47.71  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=31.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            456788999988 7999999999999997 788887665

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.33  E-value=0.02  Score=52.91  Aligned_cols=47  Identities=21%  Similarity=0.330  Sum_probs=40.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l   50 (275)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+..+++..++.+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            467899999997 999999999999999 68999999998776665543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.31  E-value=0.01  Score=55.84  Aligned_cols=45  Identities=13%  Similarity=0.243  Sum_probs=39.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      +++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+...+.
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            56889999996 7999999999999999999999998877666554

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.30  E-value=0.028  Score=48.56  Aligned_cols=79  Identities=16%  Similarity=0.080  Sum_probs=53.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC----CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            9 AVVTGSNKGIGFETVRQLASKG----ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g----~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....+++......     ....+...++..+.+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHh-------
Confidence            4689998899999999999988    789999999988877777766432210     011222112222222       


Q ss_pred             CCccEEEcCCccccc
Q 023896           85 GKLDILTKGDAEVDW   99 (275)
Q Consensus        85 g~id~li~~ag~~~~   99 (275)
                      ...|++|..+|....
T Consensus        69 ~~aDiVv~t~~~~~~   83 (263)
T cd00650          69 KDADVVIITAGVGRK   83 (263)
T ss_pred             CCCCEEEECCCCCCC
Confidence            378999999886543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.27  E-value=0.039  Score=44.63  Aligned_cols=32  Identities=25%  Similarity=0.365  Sum_probs=28.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      +|+|.|+ ||+|..+++.|+..|. ++++.+.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3778886 8999999999999998 699998876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.26  E-value=0.0091  Score=55.69  Aligned_cols=81  Identities=19%  Similarity=0.274  Sum_probs=56.0

Q ss_pred             ccCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEec
Q 023896            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (275)
Q Consensus         3 ~~~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D   66 (275)
                      +++||+||||+|                ||-.|.++|+.+..+|++|+++.-...        +. .   +..+..+.  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~-~---p~~v~~i~--  318 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA-D---PQGVKVIH--  318 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC-C---CCCceEEE--
Confidence            478999999997                578999999999999999999874331        10 1   11133333  


Q ss_pred             ccChHHHHHHHHHHHhhcCCccEEEcCCcccccch
Q 023896           67 ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        67 l~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (275)
                      +   ++..++.+.+.+.++ .|++|++|.+..+.+
T Consensus       319 V---~ta~eM~~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        319 V---ESARQMLAAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             e---cCHHHHHHHHHhhCC-CCEEEEeccccceee
Confidence            3   334455555555555 699999998876643

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.23  E-value=0.048  Score=48.61  Aligned_cols=43  Identities=21%  Similarity=0.151  Sum_probs=37.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGL   44 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~   44 (275)
                      |.+++.+++.|.|| |.+|..++..++..|. .|++.+++++.+.
T Consensus         1 ~~~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~   44 (321)
T PTZ00082          1 MTMIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ   44 (321)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh
Confidence            66777889999995 8899999999999995 8999999998654

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.22  E-value=0.027  Score=49.71  Aligned_cols=78  Identities=17%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+ +   +..      ...|..+++..+. +.+...  
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~------~vi~~~~~~~~~~-v~~~~~--  209 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFD------AVFNYKTVSLEEA-LKEAAP--  209 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC------EEEeCCCccHHHH-HHHHCC--
Confidence            47899999999999999888888889999999988876554432 2   211      1234443332222 232222  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|+++.+.|
T Consensus       210 ~gvd~vld~~g  220 (329)
T cd08294         210 DGIDCYFDNVG  220 (329)
T ss_pred             CCcEEEEECCC
Confidence            36899998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.21  E-value=0.03  Score=48.90  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|+|+++++|.+++..+...|++|+++.++.++.+.. .++   +..      ...+....+....+.+ .... 
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~~-~~~~-  206 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GAD------IAINYREEDFVEVVKA-ETGG-  206 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc------EEEecCchhHHHHHHH-HcCC-
Confidence            478999999999999999999999999999999988765433 322   111      1123333332222222 2111 


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      .++|.+++++|
T Consensus       207 ~~~d~~i~~~~  217 (325)
T TIGR02824       207 KGVDVILDIVG  217 (325)
T ss_pred             CCeEEEEECCc
Confidence            25999999877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.20  E-value=0.027  Score=52.18  Aligned_cols=114  Identities=14%  Similarity=0.012  Sum_probs=69.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-------CC--EEEEEecChhHHHHHHHHHHhcCCCC-CceeEEEecccChHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-------GI--TVVLTARDEKRGLEAVEKLKASGVDP-ELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-------g~--~vi~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      +|.|+|++|.+|.+++..|+..       +.  ++++++++.++++..+.++++....- ..+.+..   .+.       
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~y-------  171 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DPY-------  171 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CCH-------
Confidence            4889999999999999999987       64  79999999999888887777542110 0111111   111       


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc--CCCCeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--SDSPRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~iv~vsS  145 (275)
                          +.+..-|++|..||.....   .++   -.+.++.|.-    +++.+.+.+.+  .+.+.||++|-
T Consensus       172 ----e~~kdaDiVVitAG~prkp---G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        172 ----EVFQDAEWALLIGAKPRGP---GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ----HHhCcCCEEEECCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence                1223789999999974322   123   3334455543    44444444443  23455555554

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.20  E-value=0.036  Score=49.41  Aligned_cols=73  Identities=23%  Similarity=0.326  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|+|+|++ |+|...++.....|++|+.++|+.++.+.+.+ +..       -  ...|-++++..+.+.+      
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGA-------d--~~i~~~~~~~~~~~~~------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGA-------D--HVINSSDSDALEAVKE------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCC-------c--EEEEcCCchhhHHhHh------
Confidence            47999999998 99988888777789999999999998666533 311       1  2334445555444333      


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                       .+|+++..++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             2899999887

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.17  E-value=0.093  Score=48.86  Aligned_cols=123  Identities=15%  Similarity=0.147  Sum_probs=69.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |.+.+|+++|+|.+ ++|.++++.|+++|++|++.+.+....  ..+++......   +.+......   .  ...    
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~g---i~~~~g~~~---~--~~~----   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDG---LVFYTGRLK---D--ALD----   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCC---cEEEeCCCC---H--HHH----
Confidence            34678999999985 999999999999999999998765421  11223221101   333321111   1  111    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK  151 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  151 (275)
                         ...|.||...|+.+..++.    +... -..+.+.+-..++-.+.   +.. ..++|-|+...|...
T Consensus        66 ---~~~d~vv~spgi~~~~p~~----~~a~-~~~i~v~~~~~~~~~~~---~~~-~~~~I~ITGT~GKTT  123 (445)
T PRK04308         66 ---NGFDILALSPGISERQPDI----EAFK-QNGGRVLGDIELLADIV---NRR-GDKVIAITGSNGKTT  123 (445)
T ss_pred             ---hCCCEEEECCCCCCCCHHH----HHHH-HcCCcEEEhHHHHHHhh---hcC-CCCEEEEECCCcHHH
Confidence               3679999999987544321    1111 12345555555543322   111 135677776666643

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.17  E-value=0.032  Score=50.23  Aligned_cols=80  Identities=21%  Similarity=0.251  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|+.+||.||+||+|.+.++-....|+..++++++.++.+-. +.+   +..      ...|..+++-++.+.+ ..  .
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~l---GAd------~vvdy~~~~~~e~~kk-~~--~  223 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKL---GAD------EVVDYKDENVVELIKK-YT--G  223 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHc---CCc------EeecCCCHHHHHHHHh-hc--C
Confidence            578999999999999999988888885555555555443322 222   211      3467777444333322 21  4


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                      .++|+++-+.|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            6899999998753

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.13  E-value=0.028  Score=52.04  Aligned_cols=47  Identities=26%  Similarity=0.423  Sum_probs=40.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+..++...++++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            367899999987 9999999999999997 7999999998877666554

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.11  E-value=0.032  Score=49.92  Aligned_cols=76  Identities=18%  Similarity=0.224  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+ +++   +..      ...|..+. ++.+    +.+.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~------~vi~~~~~-~~~~----~~~~  232 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GAD------KLVNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCc------EEecCCcc-cHHH----Hhcc
Confidence            5789999986 8999999887778898 688899988776544 223   211      12344432 2222    2222


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                      .+.+|+++.+.|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3569999999873

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.10  E-value=0.043  Score=42.26  Aligned_cols=33  Identities=30%  Similarity=0.618  Sum_probs=27.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      +++|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            568888888 8999999999999998 78888643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.07  E-value=0.037  Score=48.39  Aligned_cols=42  Identities=17%  Similarity=0.332  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+++++|+|+++++|.+++..+...|+++++++++..+.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            468899999999999999999999999999999988765544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.06  E-value=0.0084  Score=41.02  Aligned_cols=34  Identities=18%  Similarity=0.337  Sum_probs=22.9

Q ss_pred             CC-CEEEEecCCCchhHH--HHHHHHHCCCEEEEEecC
Q 023896            5 TK-KYAVVTGSNKGIGFE--TVRQLASKGITVVLTARD   39 (275)
Q Consensus         5 ~~-k~vlItGa~~gIG~~--~a~~l~~~g~~vi~~~r~   39 (275)
                      +| |+|||+|+|+|.|++  ++..| ..|++.+.+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            44 899999999999999  55555 568887777643

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.05  E-value=0.2  Score=42.81  Aligned_cols=157  Identities=18%  Similarity=0.252  Sum_probs=96.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||--|.||+|+.+++.+-..|+++|.+..+.++.+.+.+.     +.     ...+|.+.+|-+++..+ +.  -
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken-----G~-----~h~I~y~~eD~v~~V~k-iT--n  212 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN-----GA-----EHPIDYSTEDYVDEVKK-IT--N  212 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc-----CC-----cceeeccchhHHHHHHh-cc--C
Confidence            478999999999999999999999999999999888876665432     11     13456666665443332 21  1


Q ss_pred             C-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           85 G-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        85 g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      | .+|++.-..|.....                   +.+       ..+  ++.|.+|-.+-.++..+.++         
T Consensus       213 gKGVd~vyDsvG~dt~~-------------------~sl-------~~L--k~~G~mVSfG~asgl~~p~~---------  255 (336)
T KOG1197|consen  213 GKGVDAVYDSVGKDTFA-------------------KSL-------AAL--KPMGKMVSFGNASGLIDPIP---------  255 (336)
T ss_pred             CCCceeeeccccchhhH-------------------HHH-------HHh--ccCceEEEeccccCCCCCee---------
Confidence            3 688887776643211                   111       112  13478887777666655433         


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-C---CeEEEeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-P---KFCVNCVCPG  229 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~---~i~vn~v~pG  229 (275)
                      +++++.+.++...                  |....|-....-+..++-.+-... .   +++|+.+.|=
T Consensus       256 l~~ls~k~l~lvr------------------psl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  256 LNQLSPKALQLVR------------------PSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hhhcChhhhhhcc------------------HhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence            2333333333332                  334566666666776666555554 2   6788888763

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.99  E-value=0.047  Score=47.92  Aligned_cols=64  Identities=20%  Similarity=0.313  Sum_probs=46.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc-ChHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLAD   78 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~   78 (275)
                      .|+++.|+|++| ||.--++.--+-|++|+++++..++.+++.+.|...         .-+|.+ +.+.++++.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd---------~fv~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD---------VFVDSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc---------eeEEecCCHHHHHHHHH
Confidence            589999999987 997666555556999999999987777766655322         235666 6666665554

>PRK08223 hypothetical protein; Validated

Probab=95.99  E-value=0.032  Score=48.66  Aligned_cols=38  Identities=21%  Similarity=0.242  Sum_probs=32.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~   41 (275)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++.++|.|.-
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~V   62 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVF   62 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            456788999988 7999999999999997 7888886653

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.98  E-value=0.057  Score=48.11  Aligned_cols=114  Identities=14%  Similarity=0.057  Sum_probs=66.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------EEEEEecCh--hHHHHHHHHHHhcCCCCC-ceeEEEecccChHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKASGVDPE-LLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~-~~~~~~~Dl~~~~~v~~~~   77 (275)
                      +|.|+|++|.+|..++..|+..+.       ++++.+.+.  ++++..+.++.+...... .+.     +.. +.    .
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~----~   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----ATT-DP----E   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Eec-Ch----H
Confidence            588999999999999999998874       799999865  445555556654321100 011     110 11    1


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-C-CCeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-D-SPRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-~g~iv~vsS  145 (275)
                      +    .+..-|++|..||.....   .++   -.+.+..|.--    ++.+.+.+.+. + .+.++++|-
T Consensus        75 ~----~~~daDvVVitAG~~~k~---g~t---R~dll~~Na~i----~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        75 E----AFKDVDAALLVGAFPRKP---GME---RADLLSKNGKI----FKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             H----HhCCCCEEEEeCCCCCCC---CCc---HHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCC
Confidence            1    223689999999974322   223   33445555544    44444444433 2 456666654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.96  E-value=0.027  Score=52.43  Aligned_cols=39  Identities=18%  Similarity=0.319  Sum_probs=34.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      .++|.|+ |.+|..+++.|.++|++|++++++.+..+...
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~   40 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ   40 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5888888 99999999999999999999999998766543

>PLN00203 glutamyl-tRNA reductase

Probab=95.90  E-value=0.036  Score=52.53  Aligned_cols=46  Identities=28%  Similarity=0.380  Sum_probs=40.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      +.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++++.+.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999999 9999999999999997 7999999998887776654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.90  E-value=0.14  Score=45.42  Aligned_cols=80  Identities=13%  Similarity=0.109  Sum_probs=53.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+|.|.|+ |.+|..++..|+..|.  ++++.+.+.+.++..+.+++....-.....+...  .+.       +.+   
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy-------~~~---   69 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY-------SVT---   69 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH-------HHh---
Confidence            457889996 9999999999998874  7999999988777777777654211000111110  111       112   


Q ss_pred             cCCccEEEcCCccccc
Q 023896           84 FGKLDILTKGDAEVDW   99 (275)
Q Consensus        84 ~g~id~li~~ag~~~~   99 (275)
                       ...|++|..||....
T Consensus        70 -~~adivvitaG~~~k   84 (312)
T cd05293          70 -ANSKVVIVTAGARQN   84 (312)
T ss_pred             -CCCCEEEECCCCCCC
Confidence             368999999987543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.88  E-value=0.076  Score=47.28  Aligned_cols=45  Identities=20%  Similarity=0.090  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l   50 (275)
                      +++++.|.|| |.+|..++..++..| ++|++.+++.+.++....++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl   49 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDL   49 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHH
Confidence            5678999997 889999999999988 68999999887655433333

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.86  E-value=0.055  Score=47.90  Aligned_cols=115  Identities=12%  Similarity=0.027  Sum_probs=64.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|+|++|.+|.+++..|+..+.  ++++++.+  +++..+.+|+.....   ..+...  ...+++       .+.+.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~---~~i~~~--~~~~~~-------y~~~~   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTP---AKVTGY--LGPEEL-------KKALK   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCc---ceEEEe--cCCCch-------HHhcC
Confidence            578999999999999999998884  79999988  444444445443211   111111  011111       12223


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ..|++|..||....+   .++   -.+.++.|.--.-.+.+.+.++   .+.+.+|++|-
T Consensus        68 daDivvitaG~~~k~---g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtN  118 (310)
T cd01337          68 GADVVVIPAGVPRKP---GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISN  118 (310)
T ss_pred             CCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccC
Confidence            789999999974332   122   3344555554444444444332   23445555555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.86  E-value=0.045  Score=48.22  Aligned_cols=40  Identities=23%  Similarity=0.240  Sum_probs=35.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~   44 (275)
                      +.+++++|.|. |++|+.++..|...|++|++++|+..+.+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            46899999998 77999999999999999999999976533

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.85  E-value=0.067  Score=48.99  Aligned_cols=48  Identities=27%  Similarity=0.373  Sum_probs=42.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~   51 (275)
                      +++++++||.|| |-+|.-++++|+++| .+|+++.|+.++++.+++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            468899999998 789999999999999 589999999999998888764

>PRK04148 hypothetical protein; Provisional

Probab=95.84  E-value=0.034  Score=42.82  Aligned_cols=56  Identities=23%  Similarity=0.239  Sum_probs=44.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA   71 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~   71 (275)
                      +++++++.|.+  -|.+++..|.+.|++|+.++.++...+.+.+.    .     +.++..|+.+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~-----~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----G-----LNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----C-----CeEEECcCCCCC
Confidence            45789999987  78888999999999999999999865554332    1     667888888766

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.83  E-value=0.05  Score=46.08  Aligned_cols=38  Identities=24%  Similarity=0.315  Sum_probs=32.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      ..+++.+|+|.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            3467888999988 8999999999999997 788887654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.82  E-value=0.039  Score=56.26  Aligned_cols=76  Identities=22%  Similarity=0.245  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CE-------------EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-IT-------------VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~-------------vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~   70 (275)
                      +.|+|+|.|| |.+|+..++.|++.. +.             |++++++.++++.+.+...    +   +..+++|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~---~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----N---AEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----C---CceEEeecCCH
Confidence            3578999997 999999999998753 33             8888999887776655431    1   66789999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      +++.++++       ++|+||++..
T Consensus       640 e~L~~~v~-------~~DaVIsalP  657 (1042)
T PLN02819        640 ESLLKYVS-------QVDVVISLLP  657 (1042)
T ss_pred             HHHHHhhc-------CCCEEEECCC
Confidence            88777665       5899988764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.80  E-value=0.028  Score=45.20  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=33.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      ++.+|+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            57899999999966679999999999999999999863

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.79  E-value=0.055  Score=48.00  Aligned_cols=73  Identities=21%  Similarity=0.277  Sum_probs=52.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++....++++..        ..+  +   .+++.+.+     
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--------~~~--~---~~~~~~~l-----  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--------NAV--P---LDELLELL-----  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--------eEE--e---HHHHHHHH-----
Confidence            56899999988 999999999999876 5799999999887776665421        111  1   22333222     


Q ss_pred             hcCCccEEEcCCccc
Q 023896           83 QFGKLDILTKGDAEV   97 (275)
Q Consensus        83 ~~g~id~li~~ag~~   97 (275)
                        ...|++|.+.+..
T Consensus       237 --~~aDvVi~at~~~  249 (311)
T cd05213         237 --NEADVVISATGAP  249 (311)
T ss_pred             --hcCCEEEECCCCC
Confidence              2579999988743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.75  E-value=0.088  Score=46.48  Aligned_cols=105  Identities=16%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.|.|+|+ |+||.+++..|+.++.  ++++.+.+++.++..+.+|.+.....    .....+....+    .+.    +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~----~~~~~i~~~~~----y~~----~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPL----GSDVKITGDGD----YED----L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhc----cCceEEecCCC----hhh----h
Confidence            36889999 9999999999987753  79999999777766666666432111    01111221111    111    2


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                      ..-|+++-.||..-.++   ++..   +.+..|..=.-.+.+.+..
T Consensus        68 ~~aDiVvitAG~prKpG---mtR~---DLl~~Na~I~~~i~~~i~~  107 (313)
T COG0039          68 KGADIVVITAGVPRKPG---MTRL---DLLEKNAKIVKDIAKAIAK  107 (313)
T ss_pred             cCCCEEEEeCCCCCCCC---CCHH---HHHHhhHHHHHHHHHHHHh
Confidence            37899999998754432   2333   3455555544444444433

>PRK05442 malate dehydrogenase; Provisional

Probab=95.73  E-value=0.046  Score=48.78  Aligned_cols=115  Identities=17%  Similarity=0.116  Sum_probs=65.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChh--HHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~--~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      ++|.|+|++|.+|..++..|+..+.       ++++.+++..  +++..+.++.+.... ...+.     ++. +.    
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~~----   74 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-DP----   74 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-Ch----
Confidence            4789999999999999999987664       6999998543  344444444432211 00011     111 11    


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-C-CCCeEEEEec
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-S-DSPRLVNLSS  145 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~-~~g~iv~vsS  145 (275)
                          .+.+..-|++|..||.....   .++   -.+.+..|.    .+++.+.+.+.+ . +.+.++++|-
T Consensus        75 ----y~~~~daDiVVitaG~~~k~---g~t---R~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 ----NVAFKDADVALLVGARPRGP---GME---RKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ----HHHhCCCCEEEEeCCCCCCC---CCc---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                12234789999999864322   123   333344444    445555555554 2 2456666654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.71  E-value=0.034  Score=46.66  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=37.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999999887665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.69  E-value=0.049  Score=40.48  Aligned_cols=71  Identities=30%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      ++|.|. +.+|..+++.|.+.+.+|++++++++..+...+    .+     +.++..|.++++.++++-      ..+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~-----~~~i~gd~~~~~~l~~a~------i~~a~   64 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EG-----VEVIYGDATDPEVLERAG------IEKAD   64 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TT-----SEEEES-TTSHHHHHHTT------GGCES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cc-----cccccccchhhhHHhhcC------ccccC
Confidence            567777 589999999999977799999999987555433    22     668889999988755541      12566


Q ss_pred             EEEcCCc
Q 023896           89 ILTKGDA   95 (275)
Q Consensus        89 ~li~~ag   95 (275)
                      .++....
T Consensus        65 ~vv~~~~   71 (116)
T PF02254_consen   65 AVVILTD   71 (116)
T ss_dssp             EEEEESS
T ss_pred             EEEEccC
Confidence            6665543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.68  E-value=0.063  Score=45.76  Aligned_cols=37  Identities=22%  Similarity=0.386  Sum_probs=31.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            356788999987 8999999999999996 788887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.66  E-value=0.086  Score=45.64  Aligned_cols=38  Identities=26%  Similarity=0.344  Sum_probs=31.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      ..+++..|+|.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            3467888999987 7999999999999994 788887653

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.65  E-value=0.12  Score=40.15  Aligned_cols=31  Identities=29%  Similarity=0.473  Sum_probs=26.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999998 68888755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.62  E-value=0.074  Score=46.68  Aligned_cols=79  Identities=20%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.+ +++   +..      ...|..+.+..+++.+ ... -
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~~-~~~-~  209 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD------VAVDYTRPDWPDQVRE-ALG-G  209 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC------EEEecCCccHHHHHHH-HcC-C
Confidence            467899999999999999998889999999999888765544 332   111      1123344333333222 211 1


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      .++|+++++.|
T Consensus       210 ~~~d~vl~~~g  220 (324)
T cd08244         210 GGVTVVLDGVG  220 (324)
T ss_pred             CCceEEEECCC
Confidence            25999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.62  E-value=0.051  Score=50.57  Aligned_cols=39  Identities=36%  Similarity=0.533  Sum_probs=34.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      ++.|.||.|++|.++++.|.+.|++|++.+|+.+.....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            589999999999999999999999999999998765443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.61  E-value=0.069  Score=47.52  Aligned_cols=78  Identities=14%  Similarity=0.203  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.++||+|+ |++|..++..+...|++ |++++++.++.+.+ +++.   ..      ..+|..+++ .+++.+ +...
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~g---a~------~~i~~~~~~-~~~~~~-~~~~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALG---AD------FVINSGQDD-VQEIRE-LTSG  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC---CC------EEEcCCcch-HHHHHH-HhCC
Confidence            4789999986 89999998888888998 99999888775543 3332   11      123444433 333322 2111


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       .++|+++.+.|.
T Consensus       230 -~~~d~vid~~g~  241 (339)
T cd08239         230 -AGADVAIECSGN  241 (339)
T ss_pred             -CCCCEEEECCCC
Confidence             269999998773

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.60  E-value=0.091  Score=47.55  Aligned_cols=79  Identities=15%  Similarity=0.132  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .+.++||+|+ |+||...+..+...|+ +|+.++++.++.+.+ +++.   ..      ..+|..+ ..++.+.+.++..
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~G---a~------~~i~~~~~~~~~~~~v~~~~~  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLG---AT------DCVNPNDYDKPIQEVIVEITD  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhC---CC------eEEcccccchhHHHHHHHHhC
Confidence            4789999986 8999998887778898 799999988876655 3331   11      1224333 2233333333332


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       254 --~g~d~vid~~G~  265 (368)
T TIGR02818       254 --GGVDYSFECIGN  265 (368)
T ss_pred             --CCCCEEEECCCC
Confidence              368999998874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.54  E-value=0.35  Score=42.82  Aligned_cols=75  Identities=13%  Similarity=0.085  Sum_probs=49.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+.|.|+ |.+|..++..|+.+|  .+|++.+++..+.+..+.++.....-........   .+.       +.    +.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~-------~~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY-------AD----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH-------HH----hC
Confidence            4788898 899999999999999  5899999999877655555553321100111111   111       11    24


Q ss_pred             CccEEEcCCccc
Q 023896           86 KLDILTKGDAEV   97 (275)
Q Consensus        86 ~id~li~~ag~~   97 (275)
                      ..|++|..++..
T Consensus        67 ~aDiViita~~~   78 (308)
T cd05292          67 GADVVVITAGAN   78 (308)
T ss_pred             CCCEEEEccCCC
Confidence            789999999864

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=95.53  E-value=0.34  Score=43.74  Aligned_cols=78  Identities=9%  Similarity=0.080  Sum_probs=52.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.+.|.|+ |.+|..++..|+..+.  ++++.+.+.+.++..+.+++....-....     .+....+    .+.+    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-----~i~~~~d----y~~~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-----KILASTD----YAVT----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-----EEEeCCC----HHHh----
Confidence            68999996 9999999999998874  79999999987777777776532110001     1211111    1112    


Q ss_pred             CCccEEEcCCcccc
Q 023896           85 GKLDILTKGDAEVD   98 (275)
Q Consensus        85 g~id~li~~ag~~~   98 (275)
                      ..-|++|..||...
T Consensus       104 ~daDiVVitAG~~~  117 (350)
T PLN02602        104 AGSDLCIVTAGARQ  117 (350)
T ss_pred             CCCCEEEECCCCCC
Confidence            37899999999753

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.50  E-value=0.093  Score=47.44  Aligned_cols=79  Identities=13%  Similarity=0.160  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+|||.|+ |+||..++..+...|+ +|+.++++.++.+.+ +++   +..      ..+|..+. +++.+.+.++..
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~------~~i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GAT------DCVNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCC------EEEcccccchHHHHHHHHHhC
Confidence            4789999985 8999999988888899 699999998876644 332   211      12344443 234444444433


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       255 --~g~d~vid~~g~  266 (368)
T cd08300         255 --GGVDYTFECIGN  266 (368)
T ss_pred             --CCCcEEEECCCC
Confidence              369999998773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.49  E-value=0.048  Score=44.32  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=35.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~   51 (275)
                      +|.|.|+ |-+|+.++..++..|++|++.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4678888 999999999999999999999999998877666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.49  E-value=0.23  Score=43.82  Aligned_cols=75  Identities=15%  Similarity=0.087  Sum_probs=50.7

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896           10 VVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      .|.|+ |++|..++..|+..|  .++++.+++.++++....++.+.........+.   .++.      .+.+    ..-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~---~~~~------~~~l----~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIV---RGGD------YADA----ADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEE---ECCC------HHHh----CCC
Confidence            56787 679999999999988  689999999988888777777543221111111   1111      1112    378


Q ss_pred             cEEEcCCcccc
Q 023896           88 DILTKGDAEVD   98 (275)
Q Consensus        88 d~li~~ag~~~   98 (275)
                      |++|..+|...
T Consensus        68 DiVIitag~p~   78 (300)
T cd00300          68 DIVVITAGAPR   78 (300)
T ss_pred             CEEEEcCCCCC
Confidence            99999998643

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.49  E-value=0.17  Score=40.25  Aligned_cols=86  Identities=17%  Similarity=0.081  Sum_probs=54.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCC----CCceeEEEecccChHHHHHHHHH--HH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD----PELLLFHQLDISDLASVSSLADF--IK   81 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~--~~   81 (275)
                      ++-+.|- |-+|..++++|+++|++|.+.+|++++.+++.++--.....    .....++-.-+.+.++++.++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            4666676 89999999999999999999999998877765421000000    00134455567888888888776  55


Q ss_pred             hhcCCccEEEcCC
Q 023896           82 TQFGKLDILTKGD   94 (275)
Q Consensus        82 ~~~g~id~li~~a   94 (275)
                      ....+=+++|...
T Consensus        82 ~~l~~g~iiid~s   94 (163)
T PF03446_consen   82 AGLRPGKIIIDMS   94 (163)
T ss_dssp             GGS-TTEEEEE-S
T ss_pred             hccccceEEEecC
Confidence            5444444555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.48  E-value=0.082  Score=43.64  Aligned_cols=36  Identities=22%  Similarity=0.405  Sum_probs=29.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            456788999986 6699999999999997 68888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.46  E-value=0.077  Score=47.06  Aligned_cols=114  Identities=11%  Similarity=0.059  Sum_probs=63.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|.|+|++|.+|..++..|+..+.  ++++.+++.  ++..+.++......   ..+....  ..++.       .+.+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~---~~i~~~~--~~~~~-------~~~~~   66 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTA---ASVKGFS--GEEGL-------ENALK   66 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcC---ceEEEec--CCCch-------HHHcC
Confidence            378999999999999999998875  799999887  22222334332110   1111100  11111       12234


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  145 (275)
                      .-|++|..||.....   .++   -.+.+..|+-    +++.+.+.+.+. +.+.+|++|-
T Consensus        67 daDivvitaG~~~~~---g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        67 GADVVVIPAGVPRKP---GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCEEEEeCCCCCCC---Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            789999999974332   122   3334555554    444444444332 3455566655

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.40  E-value=0.057  Score=47.20  Aligned_cols=37  Identities=27%  Similarity=0.242  Sum_probs=33.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      +++||.++|.|+++-.|+.++..|..+|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4689999999998889999999999999999888763

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.38  E-value=0.12  Score=42.68  Aligned_cols=36  Identities=17%  Similarity=0.405  Sum_probs=29.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++.+|+|.|++ |+|.++++.|+..|. ++++++.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            3567789999885 599999999999997 68888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.30  E-value=0.099  Score=43.45  Aligned_cols=126  Identities=13%  Similarity=0.174  Sum_probs=69.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      -+++||++||.|| |.+|..-++.|++.|++|++++.+...   ..+++...+    ++.++.-+....+          
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~~~----~i~~~~~~~~~~d----------   66 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELES---ELTLLAEQG----GITWLARCFDADI----------   66 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHcC----CEEEEeCCCCHHH----------
Confidence            3578999999998 789999999999999999999876542   111222221    1555554444211          


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK  151 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~  151 (275)
                        +...+++|.+.+-...+.  ..-.+.-..-+-+|..+-..++...+|...+.+ +-.|-||| .|..|
T Consensus        67 --l~~~~lVi~at~d~~ln~--~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g-~l~iaisT-~G~sP  130 (205)
T TIGR01470        67 --LEGAFLVIAATDDEELNR--RVAHAARARGVPVNVVDDPELCSFIFPSIVDRS-PVVVAISS-GGAAP  130 (205)
T ss_pred             --hCCcEEEEECCCCHHHHH--HHHHHHHHcCCEEEECCCcccCeEEEeeEEEcC-CEEEEEEC-CCCCc
Confidence              124566665544321110  000111112234555555555666677665443 34455555 44433

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.26  E-value=0.078  Score=49.21  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=50.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC---CC----EEEEEec--ChhHHHHHHHHHHhcCCCCC-ceeEEEecccChHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK---GI----TVVLTAR--DEKRGLEAVEKLKASGVDPE-LLLFHQLDISDLASVSSL   76 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~---g~----~vi~~~r--~~~~~~~~~~~l~~~~~~~~-~~~~~~~Dl~~~~~v~~~   76 (275)
                      -+|+||||+|.||-++...+++-   |.    .+++.+.  +.+.++..+-++++....-. .+.+. .  .+    .  
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~----~--  194 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DL----D--  194 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CC----H--
Confidence            45999999999999999999973   42    3667787  56777777667765321100 02221 1  11    1  


Q ss_pred             HHHHHhhcCCccEEEcCCcccc
Q 023896           77 ADFIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~   98 (275)
                           +.|...|++|..+|...
T Consensus       195 -----ea~~daDvvIitag~pr  211 (452)
T cd05295         195 -----VAFKDAHVIVLLDDFLI  211 (452)
T ss_pred             -----HHhCCCCEEEECCCCCC
Confidence                 12237899999998643

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.22  E-value=0.11  Score=47.32  Aligned_cols=79  Identities=9%  Similarity=0.121  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+|||.|+ |+||..++..+...|+ +|+.++++.++.+.+. ++   +..    .  .+|..+. +.+.+.+.++..
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~----~--~i~~~~~~~~~~~~v~~~~~  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GIT----D--FINPKDSDKPVHERIREMTG  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCc----E--EEecccccchHHHHHHHHhC
Confidence            4789999986 9999999888888898 6999999887766552 22   211    1  2243332 123333333332


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                      .  .+|+++.+.|.
T Consensus       267 ~--g~dvvid~~G~  278 (381)
T PLN02740        267 G--GVDYSFECAGN  278 (381)
T ss_pred             C--CCCEEEECCCC
Confidence            2  69999998884

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.22  E-value=0.059  Score=42.85  Aligned_cols=42  Identities=31%  Similarity=0.332  Sum_probs=32.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~   45 (275)
                      .+.||+++|.|- |.+|+.+|+.|...|++|+++..|+-++.+
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            357999999998 899999999999999999999999965443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.13  E-value=0.17  Score=38.38  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=53.1

Q ss_pred             EEEEecCCCchhHHHHHHHHH-CCCEEEE-EecCh----------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            8 YAVVTGSNKGIGFETVRQLAS-KGITVVL-TARDE----------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~-~g~~vi~-~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +|+|.|++|-+|+.+++.+.+ .+++++. ++|+.                      ..++...+.     .+      +
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D------V   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD------V   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S------E
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC------E
Confidence            689999999999999999998 5777664 56665                      112222111     11      5


Q ss_pred             EecccChHHHHHHHHHHHhhcCCccEEEcCCcc
Q 023896           64 QLDISDLASVSSLADFIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        64 ~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~   96 (275)
                      .+|++.++.+...++.+.+.  ++.+++-..|.
T Consensus        71 vIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   71 VIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            67999999999888888776  77888888775

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02928 oxidoreductase family protein

Probab=95.12  E-value=0.085  Score=47.54  Aligned_cols=38  Identities=24%  Similarity=0.323  Sum_probs=34.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+.||++.|.|- |.||+++++.|...|++|+..+|+..
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            467999999998 99999999999999999999998754

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.06  E-value=0.16  Score=46.70  Aligned_cols=87  Identities=9%  Similarity=0.048  Sum_probs=50.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhHHHHHHHHHHhcC-CCCCceeEEEecccChHHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+|+|.|++|++|..++..+...|+   +|++++++.++.+.+.+.+.... ...  ......|..+.++..+.+.++.
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~G--a~~~~i~~~~~~~~~~~v~~~t  253 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRG--IELLYVNPATIDDLHATLMELT  253 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccC--ceEEEECCCccccHHHHHHHHh
Confidence            57899999999999998776655544   79999999988766543211100 000  1112234333233333333332


Q ss_pred             hhcCCccEEEcCCc
Q 023896           82 TQFGKLDILTKGDA   95 (275)
Q Consensus        82 ~~~g~id~li~~ag   95 (275)
                      .. ..+|+++.+.|
T Consensus       254 ~g-~g~D~vid~~g  266 (410)
T cd08238         254 GG-QGFDDVFVFVP  266 (410)
T ss_pred             CC-CCCCEEEEcCC
Confidence            21 25899988776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.03  E-value=0.13  Score=46.29  Aligned_cols=74  Identities=23%  Similarity=0.388  Sum_probs=47.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec---ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR---DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r---~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++|+|+|+ |++|...+..+...|++|++++|   +.++.+ .++++   +     ...  +|..++ ++.+ .    
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---G-----a~~--v~~~~~-~~~~-~----  233 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---G-----ATY--VNSSKT-PVAE-V----  233 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---C-----CEE--ecCCcc-chhh-h----
Confidence            5789999986 99999999877778999999998   344433 22222   2     111  233332 2222 1    


Q ss_pred             hhcCCccEEEcCCcc
Q 023896           82 TQFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~~~g~id~li~~ag~   96 (275)
                      ...+.+|+++.+.|.
T Consensus       234 ~~~~~~d~vid~~g~  248 (355)
T cd08230         234 KLVGEFDLIIEATGV  248 (355)
T ss_pred             hhcCCCCEEEECcCC
Confidence            112479999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.02  E-value=0.071  Score=41.49  Aligned_cols=38  Identities=21%  Similarity=0.152  Sum_probs=33.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +++||.++|.|.+.-+|+.++..|.++|+.|+++.++.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            56899999999999999999999999999999887654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.01  E-value=0.14  Score=46.63  Aligned_cols=114  Identities=14%  Similarity=0.027  Sum_probs=65.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-E----EEE----EecChhHHHHHHHHHHhcCCCC-CceeEEEecccChHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-T----VVL----TARDEKRGLEAVEKLKASGVDP-ELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~----vi~----~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      +|.|+|++|.+|.+++..|+..+. .    |.+    ++++.++++..+.++.+....- ..+.+     +. +.    .
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-----~~-~~----y  115 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-----GI-DP----Y  115 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-----ec-CC----H
Confidence            589999999999999999998764 2    344    4888888888777776542110 00111     11 11    1


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-C-CCCeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-S-DSPRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~-~~g~iv~vsS  145 (275)
                      +    .+...|++|..||.....   .++   -.+.+..|.-    +++.+.+.+.+ . +.+.||++|-
T Consensus       116 ~----~~kdaDIVVitAG~prkp---g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 E----VFEDADWALLIGAKPRGP---GME---RADLLDINGQ----IFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             H----HhCCCCEEEECCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCC
Confidence            1    123789999999974322   123   2334444443    44444444443 2 3445555554

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.98  E-value=0.062  Score=46.70  Aligned_cols=44  Identities=25%  Similarity=0.333  Sum_probs=37.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      +++++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+.+++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999997 9999999999999997 6999999998887776543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.93  E-value=0.15  Score=45.10  Aligned_cols=31  Identities=29%  Similarity=0.526  Sum_probs=26.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      +|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            4788887 8999999999999997 68887643

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.92  E-value=0.17  Score=44.49  Aligned_cols=42  Identities=17%  Similarity=0.234  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.++||.|+++++|.+++..+...|++++.+.++.++.+..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            478999999999999999998888999999998888765544

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=94.92  E-value=0.41  Score=43.86  Aligned_cols=116  Identities=13%  Similarity=0.093  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEE-EecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|||. |+|+||..++..+...|+++++ ++++.++.+.+ +++   +     ..  .+|.....+..+.+.++...
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~---G-----a~--~v~~~~~~~~~~~v~~~~~~  252 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF---G-----CE--TVDLSKDATLPEQIEQILGE  252 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc---C-----Ce--EEecCCcccHHHHHHHHcCC
Confidence            47889995 5699999998888888987554 45666554443 222   2     11  12333222333333333221


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                       ..+|+++.+.|......    ..+..    .   ...-..++..+..++  ++|+|++++..
T Consensus       253 -~g~Dvvid~~G~~~~~~----~~~~~----~---~~~~~~~~~~~~~~~--~~G~i~~~G~~  301 (393)
T TIGR02819       253 -PEVDCAVDCVGFEARGH----GHDGK----K---EAPATVLNSLMEVTR--VGGAIGIPGLY  301 (393)
T ss_pred             -CCCcEEEECCCCccccc----ccccc----c---cchHHHHHHHHHHhh--CCCEEEEeeec
Confidence             25899999988542110    00000    0   122223444555554  45899998874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.89  E-value=0.22  Score=43.82  Aligned_cols=42  Identities=12%  Similarity=0.224  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|.|+++++|..++..+...|++++++.++.++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999988888888765554

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.89  E-value=0.19  Score=45.02  Aligned_cols=41  Identities=22%  Similarity=0.244  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+|+|.|+ |+||..++..+...|++|++++++.++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999888888899999999998876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.88  E-value=0.25  Score=43.63  Aligned_cols=44  Identities=23%  Similarity=0.174  Sum_probs=35.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~   51 (275)
                      +++.|.|+ |.+|..++..++..|. +|++.+++++.++....++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~   47 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIA   47 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHH
Confidence            46888998 9999999999999875 89999998877654443333

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.86  E-value=0.094  Score=37.53  Aligned_cols=37  Identities=19%  Similarity=0.359  Sum_probs=31.7

Q ss_pred             CCCchhHHHHHHHHHCC---CEEEEE-ecChhHHHHHHHHH
Q 023896           14 SNKGIGFETVRQLASKG---ITVVLT-ARDEKRGLEAVEKL   50 (275)
Q Consensus        14 a~~gIG~~~a~~l~~~g---~~vi~~-~r~~~~~~~~~~~l   50 (275)
                      |+|.+|.++++.|++.|   ++|.+. .|++++.++..++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            67999999999999999   899965 99998877776543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.86  E-value=0.19  Score=45.38  Aligned_cols=79  Identities=14%  Similarity=0.197  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+|||.|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++   +..      ...|..+. +++.+.+.++..
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~------~~i~~~~~~~~~~~~v~~~~~  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVT------EFVNPKDHDKPVQEVIAEMTG  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc------eEEcccccchhHHHHHHHHhC
Confidence            4789999985 8999998888888898 799999988765544 332   211      11233331 234444444433


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       256 --~~~d~vid~~G~  267 (369)
T cd08301         256 --GGVDYSFECTGN  267 (369)
T ss_pred             --CCCCEEEECCCC
Confidence              268999998763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.83  E-value=0.072  Score=44.08  Aligned_cols=42  Identities=19%  Similarity=0.167  Sum_probs=32.3

Q ss_pred             EEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHH
Q 023896           10 VVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLK   51 (275)
Q Consensus        10 lItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~   51 (275)
                      ...||+|-||.+++++|++.||+|++..|+.+ +.+...+++.
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~   46 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG   46 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc
Confidence            34577899999999999999999999966554 5555555544

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=94.82  E-value=0.53  Score=42.45  Aligned_cols=103  Identities=18%  Similarity=0.149  Sum_probs=62.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.+|+|+|+ |-||.-.+..+...|+ +|+++++++.+++.+.+.....         ...+...++.    ..++.+..
T Consensus       169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~---------~~~~~~~~~~----~~~~~~~t  234 (350)
T COG1063         169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD---------VVVNPSEDDA----GAEILELT  234 (350)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe---------EeecCccccH----HHHHHHHh
Confidence            448999998 8999998777777786 6888899998877765533211         1112222122    22222222


Q ss_pred             -C-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           85 -G-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        85 -g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                       | .+|+++-++|...                         .++.++...  +++|++++++-....
T Consensus       235 ~g~g~D~vie~~G~~~-------------------------~~~~ai~~~--r~gG~v~~vGv~~~~  274 (350)
T COG1063         235 GGRGADVVIEAVGSPP-------------------------ALDQALEAL--RPGGTVVVVGVYGGE  274 (350)
T ss_pred             CCCCCCEEEECCCCHH-------------------------HHHHHHHHh--cCCCEEEEEeccCCc
Confidence             3 6999999999221                         233344444  356899888875444

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.80  E-value=0.17  Score=44.62  Aligned_cols=78  Identities=15%  Similarity=0.177  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+++|.|+++++|.+++..+...|++|+.++++.++.+.+ +++   +..    .+  +|..+ .+..+.+.+...  
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~v--~~~~~-~~~~~~~~~~~~--  205 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD----RP--INYKT-EDLGEVLKKEYP--  205 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc----eE--EeCCC-ccHHHHHHHhcC--
Confidence            468899999999999999888888899999999887665443 222   211    11  23222 223333333322  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ..+|.++++.|
T Consensus       206 ~~vd~v~~~~g  216 (329)
T cd08250         206 KGVDVVYESVG  216 (329)
T ss_pred             CCCeEEEECCc
Confidence            36899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.70  E-value=0.27  Score=43.42  Aligned_cols=77  Identities=19%  Similarity=0.167  Sum_probs=47.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++++++||+|++|..++......|++|+.++++.++.+.+.+    .+..    .+  .|..+.+..+. +.+.... .+
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~----~~--i~~~~~~~~~~-v~~~~~~-~~  212 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAE----YV--LNSSDPDFLED-LKELIAK-LN  212 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCc----EE--EECCCccHHHH-HHHHhCC-CC
Confidence            445556999999999887777779999999998876555432    2211    11  23333332222 2222211 26


Q ss_pred             ccEEEcCCc
Q 023896           87 LDILTKGDA   95 (275)
Q Consensus        87 id~li~~ag   95 (275)
                      +|+++.+.|
T Consensus       213 ~d~vid~~g  221 (324)
T cd08291         213 ATIFFDAVG  221 (324)
T ss_pred             CcEEEECCC
Confidence            899998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.70  E-value=0.16  Score=45.90  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=33.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      .+++|+|.|+ |+||..++..+...|++|++++.+.++....++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~  225 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN  225 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH
Confidence            4789999775 899999988888889999888877655444433

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.70  E-value=0.17  Score=45.50  Aligned_cols=79  Identities=16%  Similarity=0.245  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.++||.|+ |++|..++..+...|++ |+.++++.++.+.+ +++   +..      ...|..+++..+.+ .+....
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~------~~i~~~~~~~~~~i-~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GAT------HTVNSSGTDPVEAI-RALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc------eEEcCCCcCHHHHH-HHHhCC
Confidence            4789999985 99999998887788985 88898888775554 222   211      12344443332222 222111


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       ..+|+++.+.|.
T Consensus       244 -~g~d~vid~~g~  255 (358)
T TIGR03451       244 -FGADVVIDAVGR  255 (358)
T ss_pred             -CCCCEEEECCCC
Confidence             258999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.69  E-value=0.2  Score=43.84  Aligned_cols=42  Identities=12%  Similarity=0.210  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|.|+++++|.+++..+...|++++++.++.++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            467999999999999999999999999999998888764443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.67  E-value=0.2  Score=43.35  Aligned_cols=42  Identities=21%  Similarity=0.250  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+++++|.|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478999999999999999998888999999999888765444

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.67  E-value=0.48  Score=44.54  Aligned_cols=39  Identities=21%  Similarity=0.230  Sum_probs=33.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      .+.+|+|+|.| .||.|+++++.|++.|+.|.+.+++...
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~   50 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETA   50 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHH
Confidence            35678899999 4889999999999999999999987643

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.66  E-value=0.18  Score=43.74  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999999999887665443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.62  E-value=0.11  Score=45.40  Aligned_cols=43  Identities=16%  Similarity=0.244  Sum_probs=36.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++|.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            45667777 89999999999999999999999999887755443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.60  E-value=0.13  Score=47.79  Aligned_cols=76  Identities=24%  Similarity=0.299  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ..+.++|.|+ |.+|..+++.|.+.|++|++++++++..+...+..    ..   +.++..|.++.+.++++-      .
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~---~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PN---TLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CC---CeEEECCCCCHHHHHhcC------C
Confidence            3578999999 99999999999999999999999998766554432    11   557888999877644331      1


Q ss_pred             CCccEEEcCC
Q 023896           85 GKLDILTKGD   94 (275)
Q Consensus        85 g~id~li~~a   94 (275)
                      .+.|.++...
T Consensus       296 ~~a~~vi~~~  305 (453)
T PRK09496        296 DEADAFIALT  305 (453)
T ss_pred             ccCCEEEECC
Confidence            3567776543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.57  E-value=0.035  Score=40.74  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=32.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      -++++|++||.|+ |.+|..=++.|++.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4678999999999 8999999999999999999999886

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.56  E-value=0.21  Score=45.14  Aligned_cols=78  Identities=19%  Similarity=0.261  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|||.|+ |+||..++..+...|+ +|+++++++++.+.+ +++   +..      ..+|..+++..+. +.++.. 
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~------~~i~~~~~~~~~~-i~~~~~-  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT------ATVNAGDPNAVEQ-VRELTG-  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc------eEeCCCchhHHHH-HHHHhC-
Confidence            4689999985 8999998887778899 699999988876544 332   111      1234333332222 222222 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +.+|+++.+.|.
T Consensus       258 -~g~d~vid~~G~  269 (371)
T cd08281         258 -GGVDYAFEMAGS  269 (371)
T ss_pred             -CCCCEEEECCCC
Confidence             268999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.52  E-value=0.24  Score=44.30  Aligned_cols=79  Identities=24%  Similarity=0.349  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++++|+|+ +++|..+++.+...|+ +|++++++.++.+.+ +++   +..      ..+|..+.+..+.+.+ ....
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~------~~i~~~~~~~~~~l~~-~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GAT------IVLDPTEVDVVAEVRK-LTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC------EEECCCccCHHHHHHH-HhCC
Confidence            4789999985 8999999988888999 788888888775544 222   211      1234444332222222 2111


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +.+|+++.+.|.
T Consensus       240 -~~~d~vid~~g~  251 (351)
T cd08233         240 -GGVDVSFDCAGV  251 (351)
T ss_pred             -CCCCEEEECCCC
Confidence             249999998873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.49  E-value=0.28  Score=43.55  Aligned_cols=42  Identities=19%  Similarity=0.340  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.++||.|+++++|.+++..+...|++|+++.++.++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            468999999999999999999999999999999998765443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.48  E-value=0.1  Score=42.20  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=35.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~   44 (275)
                      .+.|+++.|.|. |.||+++++.|...|++|+..+|+.....
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            567999999987 99999999999999999999999997644

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.48  E-value=0.23  Score=45.20  Aligned_cols=37  Identities=24%  Similarity=0.360  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      .+.+++|.|+ |++|..++......|++|++++++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            4789999986 899999988888889999998887654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.47  E-value=0.1  Score=48.00  Aligned_cols=42  Identities=31%  Similarity=0.393  Sum_probs=37.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +.|++|+|.|+ |.||+.+++.+...|++|+++++++.+++.+
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            46899999999 5899999999999999999999998876554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=94.44  E-value=0.9  Score=40.23  Aligned_cols=114  Identities=13%  Similarity=0.116  Sum_probs=68.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-C-CCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-D-PELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.|.|+ |.+|..+|..|+..+.  ++++.+.+.+.++..+.+|..... . ...+.+..   .+       .+.+    
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~-------y~~~----   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD-------YDDC----   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC-------HHHh----
Confidence            567888 9999999999998875  799999998887777777765321 1 01133332   12       1222    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS  145 (275)
                      ..-|++|..||.....   .++.+ -.+.+..|.    .+++.+.+.+.+.. .+.++++|-
T Consensus        67 ~~aDivvitaG~~~kp---g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 ADADIIVITAGPSIDP---GNTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCCCEEEECCCCCCCC---CCCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecC
Confidence            3789999999974332   12311 233344444    45555555555443 344444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=94.44  E-value=0.11  Score=45.47  Aligned_cols=37  Identities=24%  Similarity=0.478  Sum_probs=31.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      ..+.+.+|||.|+ ||+|.++++.|+..|- ++.++|.+
T Consensus        15 ~kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d   52 (286)
T cd01491          15 KKLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTK   52 (286)
T ss_pred             HHHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4567788999988 7999999999999997 68888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.44  E-value=0.27  Score=42.80  Aligned_cols=42  Identities=19%  Similarity=0.328  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|.|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999998889999999999888664443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.43  E-value=0.28  Score=44.64  Aligned_cols=79  Identities=14%  Similarity=0.232  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+|||.|+ |+||..++..+...|+. |++++++.++.+.+ +++   +..    .  ..|..+. ++..+.+.++..
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~----~--~i~~~~~~~~~~~~v~~~~~  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVT----D--FINPNDLSEPIQQVIKRMTG  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCc----E--EEcccccchHHHHHHHHHhC
Confidence            4789999986 99999998888788984 77788787765543 332   211    1  1343332 334444444432


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       262 --~g~d~vid~~G~  273 (378)
T PLN02827        262 --GGADYSFECVGD  273 (378)
T ss_pred             --CCCCEEEECCCC
Confidence              369999998874

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.39  E-value=0.26  Score=44.93  Aligned_cols=42  Identities=14%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|+|++|++|.+++..+...|+++++++++.++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            368999999999999999888888899999888888765544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK07411 hypothetical protein; Validated

Probab=94.36  E-value=0.23  Score=45.48  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=29.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEec
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r   38 (275)
                      .+++.+|+|.|+ ||+|..+++.|+..|. +++++|.
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            356788999988 7999999999999997 6888764

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.31  E-value=0.3  Score=44.66  Aligned_cols=42  Identities=12%  Similarity=0.140  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|+|+++++|..++..+...|+++++++++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            468999999999999999988888899988888777654433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.25  E-value=0.24  Score=47.83  Aligned_cols=35  Identities=14%  Similarity=0.298  Sum_probs=30.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      +++.+|||.|+ ||||..+++.|+..|. ++++++.+
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            46788999998 8999999999999997 68888654

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=94.25  E-value=1.1  Score=38.63  Aligned_cols=107  Identities=11%  Similarity=0.055  Sum_probs=62.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++||..|+++|+-...+........+|+.++.++...+.+.+.....+..  ++.++..|+.+..        +  .-
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~--~v~~~~~d~~~l~--------~--~~  144 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYT--NVEFRLGEIEALP--------V--AD  144 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCC--CEEEEEcchhhCC--------C--CC
Confidence            5789999999887644333333333457999999998877766655443322  3666666654321        0  11


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEe
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  144 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  144 (275)
                      +.+|+++.+.......     .              ...+++.+.+.++  ++|++++..
T Consensus       145 ~~fD~Vi~~~v~~~~~-----d--------------~~~~l~~~~r~Lk--pGG~l~i~~  183 (272)
T PRK11873        145 NSVDVIISNCVINLSP-----D--------------KERVFKEAFRVLK--PGGRFAISD  183 (272)
T ss_pred             CceeEEEEcCcccCCC-----C--------------HHHHHHHHHHHcC--CCcEEEEEE
Confidence            3689998775432211     0              1234556666664  567777654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.24  E-value=0.18  Score=46.23  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=30.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            346788999988 8999999999999997 68787643

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.23  E-value=0.11  Score=48.06  Aligned_cols=40  Identities=28%  Similarity=0.341  Sum_probs=36.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~   44 (275)
                      +.|++|+|.|. |.||+.++..|...|++|+++++++.+..
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            47999999998 79999999999999999999999987643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.23  E-value=0.073  Score=44.14  Aligned_cols=38  Identities=16%  Similarity=0.232  Sum_probs=34.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .++++|.+||.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4678999999999 8999999999999999999998765

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.18  E-value=0.27  Score=37.10  Aligned_cols=66  Identities=26%  Similarity=0.376  Sum_probs=45.0

Q ss_pred             chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC--CccEEEcCC
Q 023896           17 GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG--KLDILTKGD   94 (275)
Q Consensus        17 gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~id~li~~a   94 (275)
                      |||...+.-+...|++|+++++++.+.+.+. ++   +.     . ..+|-++.+    +.+++.+..+  ++|+++.+.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~---Ga-----~-~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~   66 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL---GA-----D-HVIDYSDDD----FVEQIRELTGGRGVDVVIDCV   66 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT---TE-----S-EEEETTTSS----HHHHHHHHTTTSSEEEEEESS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh---cc-----c-ccccccccc----cccccccccccccceEEEEec
Confidence            6898888888888999999999998755442 22   21     1 224555544    3444444443  699999998


Q ss_pred             cc
Q 023896           95 AE   96 (275)
Q Consensus        95 g~   96 (275)
                      |.
T Consensus        67 g~   68 (130)
T PF00107_consen   67 GS   68 (130)
T ss_dssp             SS
T ss_pred             Cc
Confidence            83

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.14  E-value=0.15  Score=44.52  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=33.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      +++||.++|.|.+.-+|+.++..|..+|++|+++.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999988753

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.11  E-value=0.18  Score=44.17  Aligned_cols=42  Identities=21%  Similarity=0.182  Sum_probs=35.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      ++|.|.|+ |.+|..++..|+.+|++|++.+++++..+...+.
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            55777777 8999999999999999999999999887765443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.08  E-value=0.36  Score=42.91  Aligned_cols=35  Identities=23%  Similarity=0.352  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      .+.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            38899999999999999999888899998888765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.05  E-value=0.48  Score=41.91  Aligned_cols=117  Identities=15%  Similarity=0.044  Sum_probs=63.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++.|.|+ |.+|..++..|+.+|. +|++.+++.+........+.+....    ......++-..+.+    ++    .
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~----~~~~~~i~~t~d~~----~~----~   68 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPV----GGFDTKVTGTNNYA----DT----A   68 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhc----cCCCcEEEecCCHH----Hh----C
Confidence            46788897 8899999999999886 8999999766433222222221110    00001111111111    11    3


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      .-|++|..+|.....   +.+   -.+.+..|..-...+++.+.++.   +.+.||++|-
T Consensus        69 ~aDiVIitag~p~~~---~~s---R~~l~~~N~~iv~~i~~~I~~~~---p~~~iIv~tN  119 (305)
T TIGR01763        69 NSDIVVITAGLPRKP---GMS---REDLLSMNAGIVREVTGRIMEHS---PNPIIVVVSN  119 (305)
T ss_pred             CCCEEEEcCCCCCCc---CCC---HHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEecC
Confidence            679999999864322   112   22345555555555555555442   2345555555

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=94.01  E-value=0.27  Score=42.67  Aligned_cols=85  Identities=19%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             CEEEEecCCCchhHHH--HHHHHHCCCEEEEEe-------cChhHH----HHHHHHHHhcCCCCCceeEEEecccChHHH
Q 023896            7 KYAVVTGSNKGIGFET--VRQLASKGITVVLTA-------RDEKRG----LEAVEKLKASGVDPELLLFHQLDISDLASV   73 (275)
Q Consensus         7 k~vlItGa~~gIG~~~--a~~l~~~g~~vi~~~-------r~~~~~----~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v   73 (275)
                      |+|||.|+++|-|.+.  +..|. .|+.-+.+.       +.+...    .....+....-  ..-.+-+..|.-+.+--
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k--GlyAksingDaFS~e~k  118 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK--GLYAKSINGDAFSDEMK  118 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc--CceeeecccchhhHHHH
Confidence            8999999999999884  44444 455444331       222111    11111111111  11134456787777777


Q ss_pred             HHHHHHHHhhcCCccEEEcCC
Q 023896           74 SSLADFIKTQFGKLDILTKGD   94 (275)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~a   94 (275)
                      ++.++.+.+.||++|.+|+.-
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSl  139 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSL  139 (398)
T ss_pred             HHHHHHHHHhhccccEEEEec
Confidence            888899999999999999853

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=93.99  E-value=0.13  Score=46.98  Aligned_cols=37  Identities=30%  Similarity=0.351  Sum_probs=31.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKR   42 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~   42 (275)
                      .++|.|.||||.+|.++++.|..+ ..+|....++...
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            457999999999999999999998 5688888876543

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.97  E-value=0.37  Score=42.74  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .++++||.| ++++|..++..+...|++|+.++++.++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            468999999 79999999888888899999999987765544

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.95  E-value=0.68  Score=43.82  Aligned_cols=130  Identities=14%  Similarity=0.135  Sum_probs=72.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|.++|.|. |+.|+++++.|.+.|++|.+.+.+...  ...+.+...+..   +.+...+.. +    ..+    
T Consensus         3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~~---~~~~~g~~~-~----~~~----   67 (498)
T PRK02006          3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAP--PNLAALRAELPD---AEFVGGPFD-P----ALL----   67 (498)
T ss_pred             cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcCC---cEEEeCCCc-h----hHh----
Confidence            4567888999996 689999999999999999999865421  111223322111   222211111 1    111    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHH--hHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCC
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVE--CLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKD  152 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~--~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~  152 (275)
                         ...|.+|...|+....   ..+...+.+  ...+.+.+-..++..++..+.... ...+|-|+...|...+
T Consensus        68 ---~~~d~vv~sp~I~~~~---~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTT  135 (498)
T PRK02006         68 ---DGVDLVALSPGLSPLE---AALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTT  135 (498)
T ss_pred             ---cCCCEEEECCCCCCcc---cccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHH
Confidence               2479999988865421   001111222  235666777666655554442221 1267777776766443

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=93.94  E-value=0.34  Score=41.16  Aligned_cols=32  Identities=28%  Similarity=0.496  Sum_probs=26.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.|.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~   33 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDT   33 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3677775 8999999999999997 788887644

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.94  E-value=0.31  Score=43.09  Aligned_cols=42  Identities=19%  Similarity=0.368  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|.|+++.+|..++..+...|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999999999999988776554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.89  E-value=0.32  Score=37.14  Aligned_cols=92  Identities=15%  Similarity=0.141  Sum_probs=53.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcC-----CCCCceeEEEecccChHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASG-----VDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      .-++-|.|+ |-+|.++++.|.+.|+.|..+ +|+..+.+.+.+.+....     ........+-+-+.| +.+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHH
Confidence            346788888 899999999999999998866 577666666554443210     001123344444555 477888888


Q ss_pred             HHhh--cCCccEEEcCCccccc
Q 023896           80 IKTQ--FGKLDILTKGDAEVDW   99 (275)
Q Consensus        80 ~~~~--~g~id~li~~ag~~~~   99 (275)
                      +...  +.+=.+++|++|....
T Consensus        88 La~~~~~~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALGS  109 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--G
T ss_pred             HHHhccCCCCcEEEECCCCChH
Confidence            8765  3333689999987654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=93.84  E-value=0.38  Score=42.64  Aligned_cols=37  Identities=19%  Similarity=0.382  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .++++||.|+++++|.++++.+...|++++++.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            4789999999999999999988899999998887663

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14851 hypothetical protein; Provisional

Probab=93.84  E-value=0.33  Score=47.65  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=30.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~   39 (275)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++++++.|
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            456889999995 8999999999999997 67787643

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=93.83  E-value=0.43  Score=43.06  Aligned_cols=79  Identities=14%  Similarity=0.166  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+++|.|+ |++|..++..+...|+ +|+.++++..+.+.+ +++.   ..      ...|..+. ..+.+.+.+...
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~g---a~------~~i~~~~~~~~~~~~~~~~~~  252 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFG---AT------DFINPKDSDKPVSEVIREMTG  252 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcC---CC------cEeccccccchHHHHHHHHhC
Confidence            4789999975 9999999887778898 799999988765544 3331   11      11222221 122233333332


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       253 --~g~d~vid~~g~  264 (365)
T cd08277         253 --GGVDYSFECTGN  264 (365)
T ss_pred             --CCCCEEEECCCC
Confidence              468999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=93.82  E-value=0.18  Score=44.65  Aligned_cols=40  Identities=23%  Similarity=0.118  Sum_probs=34.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      +|.|.| .|-+|.+++..|+++|++|++.+|+++..+...+
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            588888 6889999999999999999999999877665443

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=93.79  E-value=0.8  Score=42.86  Aligned_cols=78  Identities=21%  Similarity=0.146  Sum_probs=51.0

Q ss_pred             CcccCCCEEEEecCCCchhHH-HHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFE-TVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~-~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |...++|+++|.|. |+.|.+ +++.|.++|++|.+.+.+....   .+++...+     +.+.   +....  . .+  
T Consensus         2 ~~~~~~~~v~viG~-G~sG~s~~a~~L~~~G~~V~~~D~~~~~~---~~~l~~~g-----i~~~---~~~~~--~-~~--   64 (461)
T PRK00421          2 PELRRIKRIHFVGI-GGIGMSGLAEVLLNLGYKVSGSDLKESAV---TQRLLELG-----AIIF---IGHDA--E-NI--   64 (461)
T ss_pred             CCcCCCCEEEEEEE-chhhHHHHHHHHHhCCCeEEEECCCCChH---HHHHHHCC-----CEEe---CCCCH--H-HC--
Confidence            45567789999998 579999 7999999999999999765431   22343322     2222   11111  1 11  


Q ss_pred             HHhhcCCccEEEcCCcccccc
Q 023896           80 IKTQFGKLDILTKGDAEVDWS  100 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~  100 (275)
                           ...|.+|...|+....
T Consensus        65 -----~~~d~vv~spgi~~~~   80 (461)
T PRK00421         65 -----KDADVVVYSSAIPDDN   80 (461)
T ss_pred             -----CCCCEEEECCCCCCCC
Confidence                 2579999999886543

>PLN02306 hydroxypyruvate reductase

Probab=93.71  E-value=0.35  Score=44.22  Aligned_cols=38  Identities=13%  Similarity=0.098  Sum_probs=33.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHH-HCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~-~~g~~vi~~~r~~~   41 (275)
                      ++.||++.|.|- |.||+++++.|. ..|++|+..++...
T Consensus       162 ~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            467999999987 899999999986 78999999998764

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=93.66  E-value=0.2  Score=42.36  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=30.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEE-EEec
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVV-LTAR   38 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi-~~~r   38 (275)
                      ++++++++|-| .|.+|+.+++.|.+.|++|+ +.++
T Consensus        28 ~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          28 GLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            46789999998 59999999999999999999 5565

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.63  E-value=0.5  Score=42.87  Aligned_cols=79  Identities=13%  Similarity=0.207  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .+.+++|.| ++++|..++..+...|+ +|+.++++.++.+.+ +++.   ..      ..++..+. ++..+.+.++..
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lG---a~------~~i~~~~~~~~~~~~v~~~~~  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELG---AT------ECINPQDYKKPIQEVLTEMTD  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC---Cc------eEecccccchhHHHHHHHHhC
Confidence            467899996 58999999998888998 799999988776555 3331   11      11222221 123333333333


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       259 --~~~d~vld~~g~  270 (373)
T cd08299         259 --GGVDFSFEVIGR  270 (373)
T ss_pred             --CCCeEEEECCCC
Confidence              469999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02494 adenosylhomocysteinase

Probab=93.62  E-value=0.18  Score=47.09  Aligned_cols=39  Identities=23%  Similarity=0.299  Sum_probs=35.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~   43 (275)
                      +.||+++|.|. |.||+.+++.+...|++|+++++++.+.
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            47899999999 5999999999999999999999988653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.61  E-value=0.12  Score=41.09  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=31.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR   38 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r   38 (275)
                      +++||+++|.|| |-+|...++.|++.|++|++++.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            568999999998 78999999999999999998853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	275
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-73
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		5e-40
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		8e-39
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		6e-38
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		8e-38
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-13
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-13
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-09
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		3e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		3e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		3e-09
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		9e-09
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		1e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-08
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-08
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-08
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		9e-08
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-07
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-07
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-07
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-07
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-07
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		4e-07
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-07
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		9e-07
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-06
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-06
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-06
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-06
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		8e-06
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-05
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-05
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-05
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-05
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-05
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-05
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-05
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-05
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-05
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-05
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-05
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-05
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-05
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		7e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		7e-05
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		8e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		8e-05
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		9e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-04
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-04
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-04
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		4e-04
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		5e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		5e-04
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		6e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		6e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		6e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		7e-04
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		7e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		9e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		9e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/302 (50%), Positives = 191/302 (63%), Gaps = 34/302 (11%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++ AVVTG NKGIGFE  +QL+S GI VVLT RD  +G EAVEKLK S  + E ++FHQL
Sbjct: 12  RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--NHENVVFHQL 69
Query: 66  DISD-LASVSSLADFIKTQFGKLDILTKGDAEVDWS------------------------ 100
           D++D +A++SSLADFIKT FGKLDIL        +S                        
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129
Query: 101 ------KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 154
                 ++  +TYELA ECLK NY G K   E LIPLL+LSDSPR+VN+SS   +LK + 
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189
Query: 155 -EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 213
            E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR+
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249
Query: 214 LAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 273
           LA + PKF VNCVCPG VKT++N+  G  + EEGAE  V++AL PD GP+G F+   E +
Sbjct: 250 LANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELS 309
Query: 274 PF 275
            F
Sbjct: 310 AF 311

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  161 bits (407), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 158/278 (56%), Gaps = 29/278 (10%)
Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 63
Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
            DL S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT+  C 
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 127 ALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEMVVKDYF 180
            L+PL++     R+VN+SS +S  ALK    +L +K R+     E +TEE +  ++  + 
Sbjct: 123 ELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRS-----ETITEEELVGLMNKFV 175
Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTD 234
           +D ++G     GW   SSAY V+K  +   +RI A++        K  +N  CPG+V+TD
Sbjct: 176 EDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233
Query: 235 INFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 270
           +       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 234 MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 157/278 (56%), Gaps = 29/278 (10%)
Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 63
Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQTCE 126
            DL S+ +L DF++ ++G LD+L   +A + +       + +  E  +KTN++GT+    
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVN-NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVXT 122
Query: 127 ALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVENLTEERIEMVVKDYF 180
            L+PL++     R+VN+SS +S  ALK    +L +K R+     E +TEE +  ++  + 
Sbjct: 123 ELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRS-----ETITEEELVGLMNKFV 175
Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVKTD 234
           +D ++G     GW   SSAY V+K  +   +RI A++        K  +N  CPG+V+TD
Sbjct: 176 EDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233
Query: 235 INFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 270
           +       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 234 MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  154 bits (388), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 156/283 (55%), Gaps = 27/283 (9%)
Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +  + A+VTG+NKGIGF  VR L  +    VVLTARD  RG  AV++L+A G+ P    F
Sbjct: 2   SNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR---F 58
Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILTKGDA---EVDWSKVCYQTYELAVECLKTNYY 119
           HQLDI DL S+ +L DF++ ++G LD+L    A   ++D     +   EL    +KTN+ 
Sbjct: 59  HQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELT---MKTNFM 115
Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSY--VSALKDL-PEKARAVLGDVENLTEERIEMVV 176
           GT+  C  L+PL++     R+VN+SS   V AL +  PE  +      E +TEE +  ++
Sbjct: 116 GTRNVCTELLPLIKPQG--RVVNVSSTEGVRALNECSPELQQKF--KSETITEEELVGLM 171
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY------PKFCVNCVCPGF 230
             + +D + G     GW    S Y V+K  ++  +RI A++        K  +N  CPG+
Sbjct: 172 NKFVEDTKNGVHRKEGW--SDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGW 229
Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKE 271
           V+TD+       S E GAE+PV LALLP    GP G+F   K+
Sbjct: 230 VRTDMGGPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVTDKK 272

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score =  153 bits (387), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 152/266 (57%), Gaps = 27/266 (10%)
Query: 7   KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG+N+GIG    R+L  +    VVLTARD  RG  AV++L+A G+ P    FHQL
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPR---FHQL 59
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE-CLKTNYYGTKQT 124
           DI DL S+ +L DF++ ++G L++L   +A V +       +++  E  LKTN++ T+  
Sbjct: 60  DIDDLQSIRALRDFLRKEYGGLNVLVN-NAAVAFKSDDPMPFDIKAEMTLKTNFFATRNM 118
Query: 125 CEALIPLLELSDSPRLVNLSS------YVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
           C  L+P+++     R+VN+SS      + +  +DL E+  +     E LTE  +  ++K 
Sbjct: 119 CNELLPIMK--PHGRVVNISSLQCLRAFENCSEDLQERFHS-----ETLTEGDLVDLMKK 171
Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP------KFCVNCVCPGFVK 232
           + +D +       GW   +S Y VSK  +   +RILA+R        +  VN  CPG VK
Sbjct: 172 FVEDTKNEVHEREGW--PNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVK 229
Query: 233 TDINFHAGILSVEEGAESPVKLALLP 258
           TD++    I +VEEGAE+PV LALLP
Sbjct: 230 TDMDGKDSIRTVEEGAETPVYLALLP 255

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 47/232 (20%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL +  GV+    +  + 
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVET---MAFRC 78
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D+S+   V  L + +K +FGKLD +                 +   + ++ N +GT   C
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
                LL  SD+P ++N+ S                     LT E + M           
Sbjct: 139 REAFSLLRESDNPSIINIGS---------------------LTVEEVTM----------- 166
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI 235
                    P+ SAY  SK  + + T+ LAK + ++   VN + PG+ +T +
Sbjct: 167 ---------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 54/237 (22%)
Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           AE   K A++TG+  GIG ET R LA  G  VVL    E     A   +    V      
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAV------ 60
Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK--VCYQTYELAVECLKTNYY 119
            H +D+++  SV +L DF    FG+LDI+    A  D +   V   T ++  +    N  
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDLPEKARAVLGDVENLTEERIEMVVKD 178
           GT   C+  IP L  +    +VN+SS  + A  D+                         
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM------------------------- 155
Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNC--VCPGFVKT 233
                             S+AY  +KA I   TR +A +Y +  V C  + PG V+T
Sbjct: 156 ------------------STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRT 194

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L      +          EL ++ ++TN  G
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTG 137
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 138 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 164
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                         +    H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 165 -----------TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 235 I 235
           +
Sbjct: 214 M 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 74
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L      +          EL ++ ++TN  G
Sbjct: 75  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTG 133
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 134 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 160
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                         +    H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 161 -----------TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209
Query: 235 I 235
           +
Sbjct: 210 M 210

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                G  + L         
Sbjct: 138 VFRVTKQVLKAG-GMLE-RGTGRIVNIAST---------------GGKQGLV-------- 172
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                              H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 173 -------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 235 I 235
           +
Sbjct: 214 M 214

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 138 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 164
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                  ++G +       H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 165 ----TGGKQGVV-------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 235 I 235
           +
Sbjct: 214 M 214

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 50/233 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG     QLA +G  V +     K   EA VE++KA GVD   +   Q 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI---QA 67
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV-ECLKTNYYGTKQT 124
           +++D   V ++   + +QFG LD+L   +A +    +  +  E    + + TN  G    
Sbjct: 68  NVADADEVKAMIKEVVSQFGSLDVLVN-NAGITRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +   P +    S  ++NLSS V A+ +                                
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAVGN-------------------------------- 154
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                     P  + Y  +KA +   T+  A+        VN V PGF+ +D+
Sbjct: 155 ----------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 197

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 138 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 164
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                         +    H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 165 -----------TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213
Query: 235 I 235
           +
Sbjct: 214 M 214

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 74
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 75  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 133
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 134 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 160
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                  ++G +       H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 161 ----TGGKQGVV-------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209
Query: 235 I 235
           +
Sbjct: 210 M 210

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 1   MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 58
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 59  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 117
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 118 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 144
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                         +    H++ Y  SK  +  +T+ L     +    VN VCPGFV+T 
Sbjct: 145 -----------TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 193
Query: 235 I 235
           +
Sbjct: 194 M 194

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 53/241 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                D+  +  + +L   +  ++G +D+L                 EL ++ ++TN  G
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 137
Query: 121 ----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
               TKQ  +A   +LE   + R+VN++S                               
Sbjct: 138 VFRVTKQVLKAG-GMLE-RGTGRIVNIAS------------------------------- 164
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                  ++G +       H++ Y  SK  +  +T+ L     +    VN VCPG+V+T 
Sbjct: 165 ----TGGKQGVV-------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETP 213
Query: 235 I 235
           +
Sbjct: 214 M 214

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++  V+TG+N G+G  T R+LA +G TV++  RD ++G EA  +  A  V+       +L
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAARTMAGQVE-----VREL 69
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLK----TNYYGT 121
           D+ DL+SV   AD +          +  D  ++ + +    Y L V+  +    TN+ G 
Sbjct: 70  DLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGH 119
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVS-----ALKDLPEKAR 158
                 L+P L    + R+V +SS         L+DL  ++R
Sbjct: 120 FALTNLLLPRL----TDRVVTVSSMAHWPGRINLEDLNWRSR 157

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 50/234 (21%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE-KLKASGVDPELLLFH 63
           T K A+VTG+++GIG     +LAS G TVV+    +    E V  K++A+G      L  
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKA---LTA 82
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           Q D+SD A+V  L    +  FG +D+L                    +  L T      +
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVN---------------NAGIXPLTT----IAE 123
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
           T +A+       D    VNL    + L++  ++ R V G + N +  ++ ++        
Sbjct: 124 TGDAVF------DRVIAVNLKGTFNTLREAAQRLR-VGGRIINXSTSQVGLL-------- 168
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFVKTDI 235
                      P    Y  +KA + A T +L+K  R     VN V PG   TD+
Sbjct: 169 ----------HPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPGPTATDL 212

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 51/234 (21%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
           K+ A+VTG+++GIG     +LA +G  V+ TA  E  G E +    K +G++    +   
Sbjct: 28  KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA-GAEGIGAAFKQAGLEGRGAV--- 83
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVEC-LKTNYYGTKQ 123
           L+++D  +V +L +    +FG L++L   +A +   ++  +  +   +  + TN     +
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVN-NAGITQDQLAMRMKDDEWDAVIDTNLKAVFR 142
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
              A++  +  +   R+VN++S              V+G   N                 
Sbjct: 143 LSRAVLRPMMKARGGRIVNITS--------------VVGSAGN----------------- 171
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                      P    Y  +KA +   TR LA+        VNCV PGF+ TD+
Sbjct: 172 -----------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPEL 59
           M+  + + AVVTG+++GIG    R+L S G  VVLTARD ++ L AVE+ + A+G + E 
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-LRAVEREIVAAGGEAE- 81
Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTN 117
              H  D+S   ++++ A  +    G+ D+L   +A V W      T + A     +  N
Sbjct: 82  --SHACDLSHSDAIAAFATGVLAAHGRCDVLVN-NAGVGWFGGPLHTMKPAEWDALIAVN 138
Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSS 145
                    A  P +  +    ++N+SS
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRGHIINISS 166

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 92/232 (39%), Gaps = 50/232 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG     QLA +G  V +     K   EA VE++KA GVD   +   Q 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI---QA 61
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV-ECLKTNYYGTKQT 124
           +++D   V +    + +QFG LD+L   +A +    +  +  E    + + TN  G    
Sbjct: 62  NVADADEVKAXIKEVVSQFGSLDVLVN-NAGITRDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +   P      S  ++NLSS V A+ +                                
Sbjct: 121 IQKATPQXLRQRSGAIINLSSVVGAVGN-------------------------------- 148
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTD 234
                     P  + Y  +KA +   T+  A+        VN V PGF+ +D
Sbjct: 149 ----------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSD 190

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 56/245 (22%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D AS+ S+ + I+ +FG++DIL         + +     E   + ++TN     +  +
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++ + S V                                      G
Sbjct: 120 AVMRAMMKKRHGRIITIGSVV--------------------------------------G 141
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI------NFH 238
            + N G       Y  +KA +  +++ LA+        VN V PGF++TD+      +  
Sbjct: 142 TMGNGGQAN----YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR 197
Query: 239 AGILS 243
           AGIL+
Sbjct: 198 AGILA 202

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 62/246 (25%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           K A+V G   G G  TVR+L   G  V+LT R+E       E+       P +   H L 
Sbjct: 9   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRV---HALR 60
Query: 66  -DISDLASVSSLADFIKTQFGKLDIL--TKGDAEVD-WSKVCYQTYELAVECLKTNYYGT 121
            DI+DL  ++ L        G +D+L    G +E++ + +V   +Y+        N  G 
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYD---RQFAVNTKGA 117
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
             T + L PL+    S  +V  SS                                    
Sbjct: 118 FFTVQRLTPLIREGGS--IVFTSS------------------------------------ 139
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-YPK-FCVNCVCPGFVKTDINFHA 239
                 +A+ G  P  S Y  SKA + ++  +LA    P+   VN V PGF+ T     A
Sbjct: 140 ------VADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA 193
Query: 240 GILSVE 245
           GI   E
Sbjct: 194 GITEAE 199

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 62/246 (25%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           K A+V G   G G  TVR+L   G  V+LT R+E       E+       P +   H L 
Sbjct: 8   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRV---HALR 59
Query: 66  -DISDLASVSSLADFIKTQFGKLDIL--TKGDAEVD-WSKVCYQTYELAVECLKTNYYGT 121
            DI+DL  ++ L        G +D+L    G +E++ + +V   +Y+        N  G 
Sbjct: 60  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYD---RQFAVNTKGA 116
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
             T + L PL+    S  +V  SS                                    
Sbjct: 117 FFTVQRLTPLIREGGS--IVFTSS------------------------------------ 138
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-YPK-FCVNCVCPGFVKTDINFHA 239
                 +A+ G  P  S Y  SKA + ++  +LA    P+   VN V PGF+ T     A
Sbjct: 139 ------VADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA 192
Query: 240 GILSVE 245
           GI   E
Sbjct: 193 GITEAE 198

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA  + K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 61  LFHQLDISDLASVSSLADFIKT---QFGKLDILTK--GDAEVDWSKVCYQTYELAVECLK 115
                 ++D+   S   D I T   +FGK+DIL    G    D +    Q  EL  +  K
Sbjct: 81  ---NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137
Query: 116 TNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSA 149
            N+      T++T E LI          +VN+SS V+ 
Sbjct: 138 LNFQAVIEMTQKTKEHLI-----KTKGEIVNVSSIVAG 170

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K  ++TG++ GIG    R+L   G  ++L AR + R +EA+  E   A G      L   
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGT----ALAQV 59
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           LD++D  SV++ A      +G++D+L      +  S +     +     +  N  G    
Sbjct: 60  LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWG 119
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 157
             A++P++E   S +++N+ S + AL  +P  A
Sbjct: 120 IGAVLPIMEAQRSGQIINIGS-IGALSVVPTAA 151

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 56/245 (22%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D AS+ S+ + I+ +FG++DIL         + +     E   + ++TN     +  +
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++ + S V                                      G
Sbjct: 120 AVMRAMMKKRHGRIITIGSVV--------------------------------------G 141
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI------NFH 238
            + N G    ++A    KA +  +++ LA+        VN V PGF++TD+      +  
Sbjct: 142 TMGNGGQANFAAA----KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR 197
Query: 239 AGILS 243
           AGIL+
Sbjct: 198 AGILA 202

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AV+TG+++GIG    R LA  G  + L AR   R LE +  E ++  GV+   + +H 
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE---VFYHH 80
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           LD+S   SV   +  +  +FG +D++        + ++   + E   E ++ N  G  +T
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRT 140
Query: 125 CEALIPLLELSDSPRLVNLSSYVSAL 150
            +A +  L+ +    LV  S   + L
Sbjct: 141 LKAFLDSLKRTGGLALVTTSDVSARL 166

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AV+TG+++GIG    R LA  G  + L AR   R LE +  E ++  GV+   + +H 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE---VFYHH 58
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           LD+S   SV   +  +  +FG +D++        + ++   + E   E ++ N  G  +T
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRT 118
Query: 125 CEALIPLLELSDSPRLVNLSSYVSAL 150
            +A +  L+ +    LV  S   + L
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDVSARL 144

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 90/247 (36%), Gaps = 56/247 (22%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E T K A+VTG + GIG   V  L   G  VV  + DEK  +   +  K         
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK--------- 59
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
               +D+++   V    +    ++G++DIL        +S +     E+    +  N  G
Sbjct: 60  ----IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNG 115
Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
           +    +  IP++       ++N++S                              V+ Y 
Sbjct: 116 SYLMAKYTIPVMLAIGHGSIINIAS------------------------------VQSYA 145
Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA 239
                          +++AY  SK  +   TR +A  Y PK   N VCPG + T +   A
Sbjct: 146 A------------TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKA 193
Query: 240 GILSVEE 246
             + V E
Sbjct: 194 AKMEVGE 200

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 47/231 (20%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG     +L   G  V+ TA       +  E LKA+GV+   L+   LD
Sbjct: 28  KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLV---LD 84
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +S   SV++  + I+   G+  I+         + +     +   + + TN     +  +
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSK 144
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +  +   R++N+ S V A+ +  +                               
Sbjct: 145 AVLRGMTKARWGRIINIGSVVGAMGNAGQ------------------------------- 173
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                      + Y  +KA +  +TR LA+        VN V PGF+ TD+
Sbjct: 174 -----------TNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDM 213

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 94/247 (38%), Gaps = 48/247 (19%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTK--GDAEVD-WSKV-CYQTYELAVECLKT 116
                D++  A    +      +FGKLDIL    G A  D  SK    Q+ E     L  
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120
Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N        +  +P L  S    +VN+SS  S L   P+                     
Sbjct: 121 NLRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPD--------------------- 158
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTD 234
                             P+   Y ++KA I+ YTR  A    +    VN + PG V T 
Sbjct: 159 -----------------FPY---YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 198
Query: 235 INFHAGI 241
                G+
Sbjct: 199 FGSAMGM 205

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 72/244 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTGS++G+G     +L + G  +VL        L+A  E+ KA+G++   ++  + 
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN---VVVAKG 62
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGD-----------AEVDWSKVCYQTYELAVECL 114
           D+ +   V ++       FG++DIL               +E DW  V           L
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTN-------L 115
Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           K+ Y  TK   + ++       S +++N++S                             
Sbjct: 116 KSAYLCTKAVSKIMLK----QKSGKIINITSIA--------------------------- 144
Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK---FCVNCVCPGFV 231
                      G I N G     + Y  SKA +  +T+ +AK +     +C N V PG +
Sbjct: 145 -----------GIIGNAG----QANYAASKAGLIGFTKSIAKEFAAKGIYC-NAVAPGII 188
Query: 232 KTDI 235
           KTD+
Sbjct: 189 KTDM 192

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 94/259 (36%), Gaps = 71/259 (27%)
Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELL 60
           + A  +  +VTG++KGIG    RQLA+ G  + V   RD     E +  + A+G +  LL
Sbjct: 22  SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLL 81
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKL-----------DILTKGDAEVDWSKVCYQTYEL 109
            F   D+++      + +    Q G             D      +  DW  V +   + 
Sbjct: 82  SF---DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLD- 137
Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
                  ++Y   Q C  ++P++      R++ LSS                        
Sbjct: 138 -------SFYNVIQPC--IMPMIGARQGGRIITLSSV----------------------- 165
Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPG 229
                           G + NRG   +S+A         A    LAKR  K  VNC+ PG
Sbjct: 166 ---------------SGVMGNRGQVNYSAAKAGIIGATKALAIELAKR--KITVNCIAPG 208
Query: 230 FVKTDINFHAGILSVEEGA 248
            + T      G++ +EE A
Sbjct: 209 LIDT------GMIEMEESA 221

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +K A+VTG+++GIGFE    LASKG TVV TA  +    +     K  G     L+   
Sbjct: 4  NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLV--- 60
Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
          L+ISD+ S+ +    IK +   +DIL
Sbjct: 61 LNISDIESIQNFFAEIKAENLAIDIL 86

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 48/239 (20%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTK--GDAEVD--WSKVCYQTYELAVECLKT 116
                D++       + +    QFGK+D+L    G A  D   +    Q  ++  + LK 
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120
Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N     +  + + P L ++    +VN+SS V+  +  P                      
Sbjct: 121 NLQAVIEMTKKVKPHL-VASKGEIVNVSSIVAGPQAQP---------------------- 157
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
            D+                    Y ++KA ++ YTR  A    KF   VN V PG V+T
Sbjct: 158 -DFLY------------------YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVET 197

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 66/270 (24%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            + A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D   ++   +
Sbjct: 13  NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV---M 69
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCY-------QTYELAVECLKTNY 118
           D+++  SV +    +  Q G++DIL      V  + +C         T    ++ +  N 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDIL------VACAGICISEVKAEDMTDGQWLKQVDINL 123
Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
            G  ++C+A+  ++       +V + S    + + P++                      
Sbjct: 124 NGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQ---------------------- 161
Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDIN 236
                              +AY  SKA ++ Y R LA  +    +  N V P +++T + 
Sbjct: 162 ------------------QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203
Query: 237 FHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                     G E P        G P GR 
Sbjct: 204 RF--------GMEKPELYDAWIAGTPMGRV 225

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 50/233 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG      LA +G  VV+  A +E++  E V+++K  G D    +  + 
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA---IAVRA 61
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE-CLKTNYYGTKQT 124
           D+++   V+++       FG++DIL   +A V    +  +  E   +  + TN  G    
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVN-NAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +A+   +      R+VN++S V            V G+                     
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVV-----------GVTGN--------------------- 148
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDI 235
                     P  + Y  +KA +   T+  AK        VN + PGF+ TD+
Sbjct: 149 ----------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 84/235 (35%), Gaps = 50/235 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   +   + 
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KA 75
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           DI  +  +  L D     FG LDI       V +  +   T E        N  G  Q  
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG--QFF 133
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
            A      L++  R+V  SS  S                                KD+  
Sbjct: 134 VAREAYRHLTEGGRIVLTSSNTS--------------------------------KDFS- 160
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKR--YPKFCVNCVCPGFVKTDINFH 238
                    P  S Y  SK  ++++ RI +K     K  VN V PG   TD+ FH
Sbjct: 161 --------VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM-FH 206

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 50/235 (21%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K A+VT S  GIGF   R+LA  G  VV+++R ++   +AV  L+  G+     + H  
Sbjct: 15  NKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVG 74
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQ 123
              D   +  +A  +K   G +DIL   +A V+  +  +   T E+  + L  N      
Sbjct: 75  KAEDRERL--VATAVKLH-GGIDILVS-NAAVNPFFGSIMDVTEEVWDKTLDINVKAPAL 130
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A++P +E      +V +SS                                      
Sbjct: 131 MTKAVVPEMEKRGGGSVVIVSS-------------------------------------- 152
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYPK-FCVNCVCPGFVKTDIN 236
               IA     P  S Y VSK  +   T+ LA +  P+   VNC+ PG +KT  +
Sbjct: 153 ----IAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFS 203

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 60/238 (25%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL------KASGVDPELL 60
           K ++VTGS +GIG     +LAS G TV++T    +R     E++      KA GV+  LL
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLL 67
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV-ECLKTNYY 119
               ++      + +L D I       DIL   +A +   K+  +   L   E LK N  
Sbjct: 68  SEESIN-KAFEEIYNLVDGI-------DILVN-NAGITRDKLFLRMSLLDWEEVLKVNLT 118
Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
           GT    +  +  +      R+VN+SS V                                
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVV-------------------------------- 146
Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDI 235
                 G   N G   +S+    +KA +  +T+ LAK        VN V PGF++TD+
Sbjct: 147 ------GFTGNVGQVNYST----TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A VTG + GIG    R LA++GI V   ARD K    AV+ L+A+G D +       D
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVD---GSSCD 81
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++    V +       +FG + IL          +       L  + L TN  G  +   
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR 141
Query: 127 ALIPLLELSDS--PRLVNLSS 145
            ++    + ++   R+VN++S
Sbjct: 142 EVLRAGGMREAGWGRIVNIAS 162

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 57/242 (23%)
Query: 6   KKYAVVTGSNKGIGFETVRQL--ASKG-ITVVLTARDEKRGLEAVEKLKASGVDPEL--- 59
           KK  ++TG++ GIG  T  +   AS G + ++L AR     LE +E+LK + +D E    
Sbjct: 33  KKTVLITGASAGIGKATALEYLEASNGDMKLILAARR----LEKLEELKKT-IDQEFPNA 87
Query: 60  -LLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWS-KVCYQTYELAVECLKTN 117
            +   QLDI+    +    + +  +F  +DIL     +   S +V     E   +   TN
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147
Query: 118 YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
                   +A++P+ +  +S  +VNL                                  
Sbjct: 148 VTALINITQAVLPIFQAKNSGDIVNL---------------------------------- 173
Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI 235
                   G IA R   P  S Y  SK  + A+T  L K     K  V  + PG V+T+ 
Sbjct: 174 --------GSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225
Query: 236 NF 237
           + 
Sbjct: 226 SL 227

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 51/232 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT---ARDEKRGLEAVEKLKASGVDPELLLFH 63
           K AV+TGS  GIG    R LA  G  +VL    A DE R +      + +G+    +L H
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD----EVAGLSSGTVLHH 81
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
             D +  + ++     +  +FG  DIL          K+     E     +  N   +  
Sbjct: 82  PADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFH 141
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
           T    IP  +     R++N++S                                      
Sbjct: 142 TIRGAIPPXKKKGWGRIINIAS-------------------------------------- 163
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKT 233
             G +A+    P  SAY  +K  I   T+ +A    +    VN +CPG+V T
Sbjct: 164 AHGLVAS----PFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLT 211

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + + +  +VTG  KGIG       A  G  V + AR  +       +L   G     +
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGN--V 93
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           +  +LD+SD  S +  A  +   FG LD++         +++   T E   E L  N  G
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKG 153
Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 154
           T  T +A +  L  S   R++  SS    +   P
Sbjct: 154 TVYTVQACLAPLTASGRGRVILTSSITGPVTGYP 187

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 50/231 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +++  S+ ++   I  +FG +DIL    A    + +     E   + ++TN     +  +
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++N+ S V                                      G
Sbjct: 127 AVLRGMMKKRQGRIINVGSVV--------------------------------------G 148
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
            + N G   +++A    KA +  +T+ +A+        VN V PGF++TD+
Sbjct: 149 TMGNAGQANYAAA----KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 48/230 (20%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E  +    D+S
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV---CDLS 67
Query: 69  DLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
             +    L + +   F GKL+IL      V + +    T E     +  N+         
Sbjct: 68  SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 127
Query: 128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE 187
             P L+ S+   +V +SS   AL                                     
Sbjct: 128 AHPFLKASERGNVVFISSVSGALA------------------------------------ 151
Query: 188 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                  P+ + Y  +K  ++  TR LA  + K    VN V PG + T +
Sbjct: 152 ------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 195

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 48/230 (20%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E  +    D+S
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV---CDLS 68
Query: 69  DLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
             +    L + +   F GKL+IL      V + +    T E     +  N+         
Sbjct: 69  SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 128
Query: 128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE 187
             P L+ S+   +V +SS   AL                                     
Sbjct: 129 AHPFLKASERGNVVFISSVSGALA------------------------------------ 152
Query: 188 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                  P+ + Y  +K  ++  TR LA  + K    VN V PG + T +
Sbjct: 153 ------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 102/283 (36%), Gaps = 70/283 (24%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-----------ARDEKRGL-EAVE 48
           M     K A +TG+ +G G     +LA  G  +V             A+     L E V 
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100
Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYE 108
            ++  G     ++  Q D+ DLAS+ ++ D    +FG +DIL       +  +V   T +
Sbjct: 101 LVEEQG---RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQ 157
Query: 109 LAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
              + L+TN  G    C A++P ++E      ++ +SS V                    
Sbjct: 158 QWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL------------------ 199
Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNC 225
                                  RG  P  S Y  SK  +      LA    +    VN 
Sbjct: 200 -----------------------RG-APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235
Query: 226 VCPGFVKTDINFHAGILSV----------EEGAESPVKLALLP 258
           V PG V T++  +  +L +          E+ AE   +L LLP
Sbjct: 236 VNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 61/240 (25%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D AS+ S+ + I+ +FG++DIL         + +     E   + ++TN     +  +
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 127 ALIPLLELSDSPRLVNL---SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
           A++  +      R++ +   ++Y +A   L       +G  ++L                
Sbjct: 120 AVMRAMMKKRHGRIITIGGQANYAAAKAGL-------IGFSKSLAR-------------- 158
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILS 243
              E+A+RG                              VN V PGF++T  +  AGIL+
Sbjct: 159 ---EVASRG----------------------------ITVNVVAPGFIETSDDQRAGILA 187

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E  K   ++TG+++GIG  T R L +KG  V L ARDEKR       L+A   + E  L 
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR-------LQALAAELEGALP 54
Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE----CLKTNY 118
              D+ +    +     ++  FG+L  L   +A V    V    +EL +E     L TN 
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVN-NAGVG---VMKPVHELTLEEWRLVLDTNL 110
Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVS 148
            G        +P L       +VN+ S   
Sbjct: 111 TGAFLGIRHAVPALLRRGGGTIVNVGSLAG 140

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 84/235 (35%), Gaps = 50/235 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   +   + 
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KA 75
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           DI  +  +  L D     FG LDI       V +  +   T E        N  G  Q  
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG--QFF 133
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
            A      L++  R+V  SS  S                                KD+  
Sbjct: 134 VAREAYRHLTEGGRIVLTSSNTS--------------------------------KDFS- 160
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKR--YPKFCVNCVCPGFVKTDINFH 238
                    P  S +  SK  ++++ RI +K     K  VN V PG   TD+ FH
Sbjct: 161 --------VPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM-FH 206

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A VTG   G+G   VRQL ++G  V +    +    +A+  L+A G  PE++   QLD
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV-QLD 67
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++        AD ++ +FG + IL        +  +   +Y+     L  N +G      
Sbjct: 68  VASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVT 127
Query: 127 ALIPLL 132
             +P +
Sbjct: 128 TFVPRM 133

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 50/236 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   +  +  
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 89
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
            + D+  V    + +K  FGKLDI+      V +  V   T E        N  G     
Sbjct: 90  VVEDI--VRMFEEAVKI-FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
                 LE+    RL+ + S     K +P+ A                            
Sbjct: 147 REAYKHLEIGG--RLILMGSITGQAKAVPKHA---------------------------- 176
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDINFHA 239
                         Y  SK  I  + R +A      K  VN V PG +KTD+ +HA
Sbjct: 177 -------------VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM-YHA 218

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELA-VECLKTNYYGTKQTC 125
           +++  S+ ++   I  +FG +DIL   +A++    +  +  E    + ++TN     +  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVN-NADITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +A++  +      R++N+ S V                                      
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVV-------------------------------------- 147
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
           G + N G   +++A    KA +  +T+ +A+        VN V PGF++TD+
Sbjct: 148 GTMGNAGQANYAAA----KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 50/236 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   +  +  
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 89
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
            + D+  V    + +K  FGKLDI+      V +  V   T E        N  G     
Sbjct: 90  VVEDI--VRMFEEAVKI-FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
                 LE+    RL+ + S     K +P+ A                            
Sbjct: 147 REAYKHLEIGG--RLILMGSITGQAKAVPKHA---------------------------- 176
Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDINFHA 239
                         Y  SK  I  + R +A      K  VN V PG +KTD+ +HA
Sbjct: 177 -------------VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM-YHA 218

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 89/239 (37%), Gaps = 66/239 (27%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++ E        + 
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE------GSVC 77
Query: 69  DLASVSSLADFIKTQF----GKLDILTKGDAEV------DWSKVCYQTYELAVECLKTNY 118
           DL S +     ++T      GKL+IL      V      D+++  Y         + TN+
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNII------MGTNF 131
Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
                  +   PLL+ S +  ++ LSS                                 
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSS--------------------------------- 158
Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
                    IA     P  S Y  SK  IN  T+ LA  + K    VN V PG + T +
Sbjct: 159 ---------IAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 91/234 (38%), Gaps = 55/234 (23%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
           K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+S   +V  L D    Q G++DIL                          N  G + T
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDIL-------------------------VNNAGIQHT 96
Query: 125 CEALIPLL--ELSDSPRLVNLSS-YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
             ALI     E  D+   +NLS+ +      LP   +   G + N+              
Sbjct: 97  --ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH---------- 144
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKT 233
               G +A+     + SAY  +K  +  +T++ A          N +CPG+V+T
Sbjct: 145 ----GLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT 190

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 51/234 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTGS++G+G      LA  G  +++   D  R  + V++ +  G D E + F    
Sbjct: 27  RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD--- 83
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
                 V+S ++ I+  F +LD     +  +D            V+ L  N        +
Sbjct: 84  ------VTSESEIIEA-FARLD-----EQGID------------VDILVNN-----AGIQ 114
Query: 127 ALIPLLEL--SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
              P++EL  +D  R+++ ++  SA     E A+               M+ + Y K   
Sbjct: 115 FRKPMIELETADWQRVID-TNLTSAFMIGREAAK--------------RMIPRGYGKIVN 159
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDIN 236
            G + +       + Y V+K  I   TR +A  + ++ +  N + PG++ TD+N
Sbjct: 160 IGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN 213

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           ++  AVVTG + GIG  TV  L   G  V   ARD +R L A E           L    
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER-LRAAESALRQRFPGARLFASV 65
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+ D   V + A+  +   G   IL     +   S     T E   E L+  ++     
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125
Query: 125 CEALIPLLELSDSPRLVNLSSYVSA 149
             A +P LE      +V ++S +++
Sbjct: 126 VRAFLPQLESRADAAIVCVNSLLAS 150

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGVDPELLLFH 63
           K A+VTG++ GIGF      A  G T+V    +++   RG+ A    KA+G++      +
Sbjct: 35  KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAA---YKAAGINAH---GY 88
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
             D++D   + ++   I+++ G +DIL      +    +   T     + +  +      
Sbjct: 89  VCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFI 148
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A+IP +      +++N+ S +S L      A A         +  ++M+ K+   +Y
Sbjct: 149 VSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA-------AKGGLKMLTKNIASEY 201
Query: 184 EEGEIANRGWCP 195
            E  I   G  P
Sbjct: 202 GEANIQCNGIGP 213

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG   GIG  T  + A +G  +VL+  D+    +AV  L+  G D   ++    D
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV---CD 88
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +  L  +  LAD      G +D++      V    +    ++     +  + +G+    E
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148
Query: 127 ALIP-LLELSDSPRLVNLSSY 146
           A +P LLE      +   +S+
Sbjct: 149 AFLPRLLEQGTGGHIAFTASF 169

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 50/231 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +++  S+ ++   I  +FG +DIL         + +     E   + ++TN     +  +
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++N+ S V                                      G
Sbjct: 127 AVLRGMMKKRQGRIINVGSVV--------------------------------------G 148
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
            + N G   +++A    KA +  +T+ +A+        VN V PGF++TD+
Sbjct: 149 TMGNAGQANYAAA----KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTGS  GIG    + LA  G  +VL    +     A+ ++   GV     + H  D
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKA---VHHPAD 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +SD+A + +L    + +FG +DIL         + V     E   + +  N         
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 127 ALIPLLELSDSPRLVNLSS 145
             +P +   +  R++N++S
Sbjct: 120 LALPGMRARNWGRIINIAS 138

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 91/234 (38%), Gaps = 55/234 (23%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
           K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+S   +V  L D    Q G++DIL                          N  G + T
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDIL-------------------------VNNAGIQHT 96
Query: 125 CEALIPLL--ELSDSPRLVNLSS-YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
             ALI     E  D+   +NLS+ +      LP   +   G + N+              
Sbjct: 97  --ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH---------- 144
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKT 233
               G +A+     + SAY  +K  +  +T++ A          N +CPG+V++
Sbjct: 145 ----GLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRS 190

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 55/240 (22%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG ++GIG    + L   G  V + ARD +   +   +L A G D + +     D
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAI---PAD 85
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAV--ECLKTNYYGTKQT 124
           +S  A    LA  +     +LDIL   +A   W     ++Y ++   + ++ N       
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVN-NAGTSWG-AALESYPVSGWEKVMQLNVTSVFSC 143
Query: 125 CEALIPLLELSDS----PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
            + L+PLL  S S     R++N+ S V+ +  + E+A                       
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGS-VAGISAMGEQAY---------------------- 180
Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH 238
                             AY  SKA ++  +R+LAK        VN + PG   + +  H
Sbjct: 181 ------------------AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 199 AYKVSKAVINAYTRILA---KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLA 255
           AY++SKA IN + R LA   K      VN  CPG+V+T++      L+VE+     +   
Sbjct: 171 AYRMSKAAINMFGRTLAVDLKDDNVLVVN-FCPGWVQTNLGGKNAALTVEQSTAELISSF 229
Query: 256 LLPDGGPTGRFFLRK 270
              D    GRFF+R 
Sbjct: 230 NKLDNSHNGRFFMRN 244

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 72/247 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASG-----VDPELL 60
           K A+VTG+++GIG    ++LA+ G  V +   + K    E V +++++G     +   L 
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 67
Query: 61  LFHQLDISDLASVSSLADFIKTQFG--KLDILTKGDAEVDWSKVCYQTYELAVECLKTNY 118
             H ++    A  SSL + ++ + G  K DIL   +A +       +T E         +
Sbjct: 68  SLHGVE----ALYSSLDNELQNRTGSTKFDILIN-NAGIGPGAFIEETTE--------QF 114
Query: 119 YGTKQTCEALIP-------LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
           +    +  A  P       L  L D+ R++N+SS  +                      R
Sbjct: 115 FDRXVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT----------------------R 152
Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
           I +                    P   AY  +K  IN  T  LAK+       VN + PG
Sbjct: 153 ISL--------------------PDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPG 192
Query: 230 FVKTDIN 236
           FVKTD N
Sbjct: 193 FVKTDXN 199

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +++  S+ ++   I  +FG +DIL         + +     E   + ++TN     +  +
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++N+ S V                                      G
Sbjct: 127 AVLRGMMKKRQGRIINVGSVV--------------------------------------G 148
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
            + N G    ++A    KA +  +T+ +A+        VN V PGF++TD+
Sbjct: 149 TMGNAGQANFAAA----KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
          + K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK   GV    +L  
Sbjct: 6  SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLEV 62
Query: 64 QLDISDLASVSSLADFIKTQFGKLDILTK 92
           +D++    V ++ + +++ FG  DIL  
Sbjct: 63 AVDVATPEGVDAVVESVRSSFGGADILVN 91

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
          + K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK   GV    +L  
Sbjct: 6  SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLEV 62
Query: 64 QLDISDLASVSSLADFIKTQFGKLDILTK 92
           +D++    V ++ + +++ FG  DIL  
Sbjct: 63 AVDVATPEGVDAVVESVRSSFGGADILVN 91

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 84/231 (36%), Gaps = 49/231 (21%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           + + A+VTG +KGIG    R L   G TV +   D       V  L+  G   E+     
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV----- 65
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D++  ASV +         G  D+L         +     T   AV+     +      
Sbjct: 66  -DVTKRASVDAAMQKAIDALGGFDLLC--------ANAGVSTMRPAVDITDEEWD----- 111
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
                       + R V L++ ++    L    + V+ +  +L                 
Sbjct: 112 -------FNFDVNARGVFLANQIACRHFLASNTKGVIVNTASL----------------- 147
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK-FCVNCVCPGFVKT 233
               A +   P  + Y  SK  +  +T+ LA+   PK   VNCVCPGFVKT
Sbjct: 148 ----AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKT 194

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 90/233 (38%), Gaps = 55/233 (23%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
           K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+S   +V  L D    Q G++DIL                          N  G + T
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDIL-------------------------VNNAGIQHT 96
Query: 125 CEALIPLL--ELSDSPRLVNLSS-YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
             ALI     E  D+   +NLS+ +      LP   +   G + N+              
Sbjct: 97  --ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH---------- 144
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVK 232
               G +A+     + SAY  +K  +  +T++ A          N +CPG+V+
Sbjct: 145 ----GLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVR 189

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 49/230 (21%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T K  V++G    +G    R+ A +G  +VL AR  +R  +  +++  +G      L   
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVG 66
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQ 123
            DI+D A V+ L D     +G++D++      V   K     T+E   + ++   +G  +
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +   P LE S    +VN++S                            MVV+     Y
Sbjct: 127 LIQGFTPALEESKGA-VVNVNS----------------------------MVVRHSQAKY 157
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFV 231
                          AYK++K+ + A ++ LA    +    VN V PG++
Sbjct: 158 --------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYI 193

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 99/244 (40%), Gaps = 64/244 (26%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTGS++G+G     +LA  G  +V+  AR +K  LE  E+++  GV    +L  +
Sbjct: 4   NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVK 60
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ- 123
            ++   A +  +   I   FG+LD+     A    S V     EL     +T++  T   
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAA----SGVLRPVMELE----ETHWDWTMNI 112
Query: 124 TCEALI-------PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
             +AL+        L+E +    +V++SS               LG +            
Sbjct: 113 NAKALLFCAQEAAKLMEKNGGGHIVSISS---------------LGSIR----------- 146
Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYPK-FCVNCVCPGFVKTD 234
             Y ++Y              +   VSKA + A TR LA +  PK   VN V  G + TD
Sbjct: 147 --YLENY--------------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTD 190
Query: 235 INFH 238
              H
Sbjct: 191 ALKH 194

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 55/236 (23%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +      +  
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS---GYAG 100
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTN----YYGT 121
           D+S    +S + + I T+   +DIL         +       +   + L+TN    +Y T
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 160
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
           +   + +I     +   R++N+SS V                                  
Sbjct: 161 QPISKRMIN----NRYGRIINISSIV---------------------------------- 182
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDI 235
               G   N G   +SS    SKA +  +T+ LAK        VN + PGF+ +D+
Sbjct: 183 ----GLTGNVGQANYSS----SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 192 GWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH 238
           G  P + AY  SK  +  +TR LAK   PK  VN VCPG + T   FH
Sbjct: 150 GGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMIST--TFH 195

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG+  GIG    ++  ++G  V +T R +     A+ ++    V        Q D
Sbjct: 30  KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG------IQAD 83
Query: 67  ISDLASVSSLADFIKTQFGKLDIL---TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
            ++LA +  L + +K + G++D+L     G + +   +V  + Y+   +    N  G   
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYD---DTFDRNVKGVLF 140
Query: 124 TCEALIPLLELSDS 137
           T +  +PLL    S
Sbjct: 141 TVQKALPLLARGSS 154

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 50/233 (21%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K A+VT S  GIG    R+LA  G  VV+++R ++     V  L+  G+     + H  
Sbjct: 14  NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 73
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQ 123
              D   + ++A  +    G +DIL   +A V+  +  +   T E+  + L  N   T  
Sbjct: 74  KAEDRERLVAMAVNL---HGGVDILVS-NAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129
Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A++P +E      ++ +SS V A    P           NL                
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSS-VGAYHPFP-----------NL---------------- 161
Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYPK-FCVNCVCPGFVKTD 234
                           Y VSK  +   T+ LA +  P+   VNC+ PG +KT+
Sbjct: 162 --------------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTN 200

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 93/239 (38%), Gaps = 58/239 (24%)
Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVDPELLLFHQLDI 67
           +VTG++ GIG E     A  G TV+L  R+E       EKL+  AS ++ E     Q  I
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNE-------EKLRQVASHINEETGRQPQWFI 68
Query: 68  SDLASVSS-----LADFIKTQFGKLD-ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
            DL + +S     LA  I   + +LD +L       D   +  Q  ++  + ++ N   T
Sbjct: 69  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
               +AL+PLL  SD+  LV  SS V        + RA  G                   
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVG------RQGRANWG------------------- 163
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA 239
                            AY  SK       ++LA  Y  +  VNC+ PG  +T +   A
Sbjct: 164 -----------------AYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA 205

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L     +P+  LF Q D
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQCD 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKG---DAEVDWSK 101
           ++D   +      +   FG+LDIL      + E +W K
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEK 104

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 50/231 (21%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +++  S+ ++   I  +FG +DIL         + +     E   + ++TN     +  +
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++N+ S V                                      G
Sbjct: 127 AVLRGMMKKRQGRIINVGSVV--------------------------------------G 148
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFVKTDI 235
            + N G   +++A    KA +  +T+ +A+        VN V PG ++TD+
Sbjct: 149 TMGNAGQANYAAA----KAGVIGFTKSMAREVASRGVTVNTVAPGAIETDM 195

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQL 65
           ++A++T   KG+G +   +L +KG +V +T   +     A+E +K +  D  E L F Q 
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT---AMETMKETYKDVEERLQFVQA 64
Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK---VCYQTYELAVECLKTNYYGTK 122
           D++    +  + +   + FGK+D L        + +   V Y+  E   E ++ N     
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWN-EMIQGNLTAVF 123
Query: 123 QTCEALIPLLELSDSPRLVN 142
              + ++P++   +  R++N
Sbjct: 124 HLLKLVVPVMRKQNFGRIIN 143

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 93/239 (38%), Gaps = 58/239 (24%)
Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVDPELLLFHQLDI 67
           +VTG++ GIG E     A  G TV+L  R+E       EKL+  AS ++ E     Q  I
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNE-------EKLRQVASHINEETGRQPQWFI 70
Query: 68  SDLASVSS-----LADFIKTQFGKLD-ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
            DL + +S     LA  I   + +LD +L       D   +  Q  ++  + ++ N   T
Sbjct: 71  LDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNAT 130
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
               +AL+PLL  SD+  LV  SS V        + RA  G                   
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVG------RQGRANWG------------------- 165
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA 239
                            AY  SK       ++LA  Y  +  VNC+ PG  +T +   A
Sbjct: 166 -----------------AYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA 207

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG++ GIG    R L  +G+ VV  AR      E   + K++G  P  L+ ++ D
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCD 91
Query: 67  ISDLASVSSLADFIKTQFGKLDI 89
           +S+   + S+   I++Q   +DI
Sbjct: 92  LSNEEDILSMFSAIRSQHSGVDI 114

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 46/234 (19%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T K A+VTGS +G+GF     LA+ G  V+L         E+V+ L   G D   + F  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF-- 65
Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D++D  ++ +    +  +   +DIL   +A + + K      EL +E    N+     T
Sbjct: 66  -DVTDELAIEAAFSKLDAEGIHVDILIN-NAGIQYRK---PMVELELE----NWQKVIDT 116
Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
                 L+  S + R++               AR   G + N+                 
Sbjct: 117 NLTSAFLVSRSAAKRMI---------------ARNSGGKIINI----------------- 144
Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDIN 236
            G + ++   P  + Y  +K  I   T  +A  + +F +  N + PG++ TD+N
Sbjct: 145 -GSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN 197

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 3  EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLL 61
          E  K  A++TG+++GIG      LA+ G  VVL AR  K+ LE V +++  S    +  +
Sbjct: 4  EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIXRSNKHVQEPI 62
Query: 62 FHQLDISDLASVSSLADFIKTQFGKLDILTKGDA 95
             LDI+D     +    I  ++G +DIL    A
Sbjct: 63 VLPLDITDCTKADTEIKDIHQKYGAVDILVNAAA 96

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 93/239 (38%), Gaps = 58/239 (24%)
Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVDPELLLFHQLDI 67
           +VTG++ GIG E     A  G TV+L  R+E       EKL+  AS ++ E     Q  I
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNE-------EKLRQVASHINEETGRQPQWFI 66
Query: 68  SDLASVSS-----LADFIKTQFGKLD-ILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
            DL + +S     LA  I   + +LD +L       D   +  Q  ++  + ++ N   T
Sbjct: 67  LDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNAT 126
Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
               +AL+PLL  SD+  LV  SS V        + RA  G                   
Sbjct: 127 FMLTQALLPLLLKSDAGSLVFTSSSVG------RQGRANWG------------------- 161
Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA 239
                            AY  SK       ++LA  Y  +  VNC+ PG  +T +   A
Sbjct: 162 -----------------AYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA 203

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           L   LD+ D A++  L      QFG+LD++      + W +V   T E     +  N  G
Sbjct: 80  LTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTG 139
Query: 121 TKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLP 154
           T +T  A +P ++E  +   +V +SS  + LK  P
Sbjct: 140 TWRTLRATVPAMIEAGNGGSIVVVSSS-AGLKATP 173

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 78/231 (33%), Gaps = 58/231 (25%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG N+GIG    R  A  G  V +T R              SG  PE  L  + D
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYR--------------SGEPPEGFLAVKCD 67
Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           I+D   V      I+   G +++L           +   + E     ++TN  GT +  +
Sbjct: 68  ITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVK 127
Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                +  +   R+V +SS V  L    +                               
Sbjct: 128 RANRAMLRAKKGRVVLISSVVGLLGSAGQ------------------------------- 156
Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNCVCPGFVKTDI 235
             AN         Y  SKA +  + R LA+         N V PGFV TD+
Sbjct: 157 --AN---------YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM 196

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	275
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-112
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-103
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-51
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-42
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-34
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-34
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-32
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-32
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-31
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-30
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-29
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-29
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	8e-29
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-28
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-28
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-28
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-28
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-28
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-27
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-27
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-27
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-27
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-27
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-27
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-27
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	8e-27
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	9e-27
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-26
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-26
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-26
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-26
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-26
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-26
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-26
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-26
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-25
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-25
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-25
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-25
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-25
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-25
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-25
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-25
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-25
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	9e-25
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-24
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-24
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-24
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-24
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-24
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-24
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-24
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-24
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	5e-24
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-24
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-24
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-24
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	7e-24
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	9e-24
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-24
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	9e-24
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-23
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-23
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-23
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-23
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-23
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-23
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-23
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-23
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-23
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-23
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-23
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-23
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-23
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-23
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-23
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-23
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-23
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-23
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-23
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	4e-23
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-23
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	6e-23
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	6e-23
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-23
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-22
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-22
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-22
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-22
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-22
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-22
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-22
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	5e-22
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-22
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-22
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-22
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	8e-22
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-22
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	9e-22
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-21
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-21
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-21
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-21
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-21
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	6e-21
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-21
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-21
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-20
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-20
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-20
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-20
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-20
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-20
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-20
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-20
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-20
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-20
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-19
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-19
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-19
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-19
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	5e-19
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-18
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-18
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-18
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-18
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	5e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-18
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-18
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	9e-18
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-17
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-17
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-17
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-17
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-17
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-17
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-17
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-17
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-17
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	8e-04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-17
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-16
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-16
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-16
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-16
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	4e-16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-16
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	7e-16
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	8e-16
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-15
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-15
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-15
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-15
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-14
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-14
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-14
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-13
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-13
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-13
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-12
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-12
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-11
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-08
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-08
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-07
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-05
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-05
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-05
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-05
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-05
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	3e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	5e-05
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	6e-05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-05
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-05
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	7e-05
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	7e-05
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	8e-05
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	8e-05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-04
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-04
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-04

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  324 bits (833), Expect = e-112
 Identities = 150/303 (49%), Positives = 190/303 (62%), Gaps = 34/303 (11%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            ++ AVVTG NKGIGFE  +QL+S GI VVLT RD  +G EAVEKLK S    E ++FHQ
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQ 68

Query: 65  LDISD-LASVSSLADFIKTQFGKLDILTK------------------------------G 93
           LD++D +A++SSLADFIKT FGKLDIL                                 
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 94  DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 153
             + +  ++  +TYELA ECLK NY G K   E LIPLL+LSDSPR+VN+SS   +LK +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 154 -PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR 212
             E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 213 ILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE 272
           +LA + PKF VNCVCPG VKT++N+  G  + EEGAE  V++AL PD GP+G F+   E 
Sbjct: 249 VLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSEL 308

Query: 273 APF 275
           + F
Sbjct: 309 SAF 311

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  301 bits (772), Expect = e-103
 Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    F
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---F 58

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVECLK 115
           HQLDI DL S+ +L DF++ ++G LD+L        K              +  A   +K
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPT-------PFHIQAEVTMK 111

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK-DLPEKARAVLGDVENLTEERIEM 174
           TN++GT+  C  L+PL+      R+VN+SS +S                 E +TEE +  
Sbjct: 112 TNFFGTRDVCTELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVG 169

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK------FCVNCVCP 228
           ++  + +D ++G     GW   SSAY V+K  +   +RI A++  +        +N  CP
Sbjct: 170 LMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP 227

Query: 229 GFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF 275
           G+V+TD+       S EEGAE+PV LALLP    GP G+F   K    +
Sbjct: 228 GWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW 276

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  167 bits (424), Expect = 4e-51
 Identities = 58/289 (20%), Positives = 99/289 (34%), Gaps = 75/289 (25%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    VVTG+N+GIG   V+QL        ++ TARD ++  E  + +K S V       
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVH-----V 55

Query: 63  HQLDISDLASVSSLADFIKTQFG--KLDIL---------TKGDAEVDWSKVCYQTYELAV 111
             L ++   S+ +    +    G   L +L            + E +          +  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPN--------RAVIA 107

Query: 112 ECLKTNYYGTKQTCEALIPLLELS-----------DSPRLVNLSSYVSALKDLPEKARAV 160
           E L  N        + L+PLL+ +               ++ +SS + ++          
Sbjct: 108 EQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI---------- 157

Query: 161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 220
                                     +  +        AY++SKA IN + R LA     
Sbjct: 158 -------------------------TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKD 192

Query: 221 --FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFF 267
               V   CPG+V+T++      L+VE+     +      D    GRFF
Sbjct: 193 DNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFF 241

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  145 bits (369), Expect = 1e-42
 Identities = 47/283 (16%), Positives = 96/283 (33%), Gaps = 68/283 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG N+G+G   V+ L +       +  T R+ ++  + +E L  +  +   +   
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSN---IHIL 77

Query: 64  QLDISDLASVSSLADFIKTQFG--KLDILT----KGDAEVDWSKVCYQTYELAVECLKTN 117
           ++D+ +  +   L   I+       L++L             + V     +  ++ L+TN
Sbjct: 78  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV---RSQELLDTLQTN 134

Query: 118 YYGTKQTCEALIPLLELSDSP-----------RLVNLSSYVSALKDLPEKARAVLGDVEN 166
                   +A +PLL+ +               ++N+SS + +++               
Sbjct: 135 TVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG-------------- 180

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVN 224
                                  N        AY+ SK+ +NA T+ L+           
Sbjct: 181 -----------------------NTD--GGMYAYRTSKSALNAATKSLSVDLYPQRIMCV 215

Query: 225 CVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFF 267
            + PG+VKTD+   +  L V       V+          G F 
Sbjct: 216 SLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 258

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  123 bits (312), Expect = 2e-34
 Identities = 53/243 (21%), Positives = 86/243 (35%), Gaps = 68/243 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ +GIG    R  A+ G +VVL  R E    E  +++K++G    L++   L+
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE 74

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGD-------AEVDWSKVCYQTYELAVECL 114
            +       LA  ++ +FG+LD L       G         + D+ +V      + V  +
Sbjct: 75  NATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQV------MHVN-V 127

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
              +  T+    AL+PLL+ S+   +   SS V                           
Sbjct: 128 NATFMLTR----ALLPLLKRSEDASIAFTSSSV--------------------------- 156

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFV 231
                      G      W     AY VSK       + LA           N + PG  
Sbjct: 157 -----------GRKGRANW----GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGAT 201

Query: 232 KTD 234
           +T 
Sbjct: 202 RTG 204

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  123 bits (312), Expect = 2e-34
 Identities = 53/242 (21%), Positives = 79/242 (32%), Gaps = 66/242 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG++ GIG E     A  G TV+L  R+E++  +    +              L 
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 72

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDA-------EVDWSKVCYQTYELAVECL 114
                +   LA  I   + +LD +       GD           W  V      + V  +
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV------MQV-NV 125

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
              +  T+    AL+PLL  SD+  LV  SS V                           
Sbjct: 126 NATFMLTQ----ALLPLLLKSDAGSLVFTSSSV--------------------------- 154

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT 233
                      G      W     AY  SK       ++LA  Y  +  VNC+ PG  +T
Sbjct: 155 -----------GRQGRANW----GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRT 199

Query: 234 DI 235
            +
Sbjct: 200 AM 201

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  119 bits (301), Expect = 2e-32
 Identities = 60/284 (21%), Positives = 98/284 (34%), Gaps = 73/284 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL---------------TKGDAEVDWSKVCYQ 105
                D++       + +    QFGK+D+L                       + K    
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT--- 117

Query: 106 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 165
                   LK N     +  + + P L ++    +VN+SS V+                 
Sbjct: 118 --------LKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIVA----------------- 151

Query: 166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 223
                               G  A     P    Y ++KA ++ YTR  A    KF   V
Sbjct: 152 --------------------GPQAQ----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRV 187

Query: 224 NCVCPGFVKTDINFHAGILSVEEGAESPVK-LALLPDGGPTGRF 266
           N V PG V+T   F   +   ++ ++     +A   +  P G  
Sbjct: 188 NSVSPGMVETG--FTNAMGMPDQASQKFYNFMASHKECIPIGAA 229

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  118 bits (298), Expect = 4e-32
 Identities = 60/283 (21%), Positives = 94/283 (33%), Gaps = 71/283 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL----------TKGDA-----EVDWSKVCYQ 105
                D++  A    +      +FGKLDIL          ++           +      
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDAT--- 117

Query: 106 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 165
                   L  N        +  +P L  S    +VN+SS  S L               
Sbjct: 118 --------LNLNLRSVIALTKKAVPHL-SSTKGEIVNISSIASGL--------------- 153

Query: 166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 223
                                        P    Y ++KA I+ YTR  A    +    V
Sbjct: 154 -------------------------HAT-PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRV 187

Query: 224 NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           N + PG V T     A  +  E   +    +A + +  P G  
Sbjct: 188 NSISPGLVATGF-GSAMGMPEETSKKFYSTMATMKECVPAGVM 229

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  117 bits (295), Expect = 2e-31
 Identities = 56/281 (19%), Positives = 92/281 (32%), Gaps = 69/281 (24%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA  + K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV------DWSKVCYQTY 107
                D+++ +    + +    +FGK+DIL                     + K      
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT----- 135

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                  K N+    +  +     L +     +VN+SS V+                   
Sbjct: 136 ------FKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVA------------------- 169

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNC 225
                             G  A+         Y  +KA ++ YTR  A    +    VN 
Sbjct: 170 ------------------GPQAH----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNS 207

Query: 226 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           V PG V T     A  L      +    +    +  P G  
Sbjct: 208 VSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPVGHC 247

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  112 bits (282), Expect = 7e-30
 Identities = 60/274 (21%), Positives = 95/274 (34%), Gaps = 76/274 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D   +    +D
Sbjct: 14  RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---VSSVVMD 70

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           +++  SV +    +  Q G++DIL         +       +  W K            +
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQ-----------V 119

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N  G  ++C+A+  ++       +V + S                            M
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQGVIVAIGS----------------------------M 151

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G I NR      +AY  SKA ++ Y R LA  +       N V P +++
Sbjct: 152 S----------GLIVNRP--QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIE 199

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T +           G E P        G P GR 
Sbjct: 200 TTLT--------RFGMEKPELYDAWIAGTPMGRV 225

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  110 bits (277), Expect = 4e-29
 Identities = 51/278 (18%), Positives = 76/278 (27%), Gaps = 75/278 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             AVVTG + GIG  TV  L   G  V   ARD +R   A   L+        L     D
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR-LFASVCD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDIL--------------TKGDAEVDWSKVCYQTYELAVE 112
           + D   V + A+  +   G   IL              T  +    WS+           
Sbjct: 68  VLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDE---AWSEE---------- 114

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            L+  ++       A +P LE      +V ++S +                         
Sbjct: 115 -LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL------------------------- 148

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                                 PH  A   ++A +    R +A  +      VN +  G 
Sbjct: 149 -------------ASQPE----PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGL 191

Query: 231 VKTDIN--FHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           V++             E                P GR 
Sbjct: 192 VESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRL 229

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  110 bits (277), Expect = 5e-29
 Identities = 58/280 (20%), Positives = 94/280 (33%), Gaps = 69/280 (24%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M       A++TG+  GIG  T   LA+ G+TV    R      E  +++  +G      
Sbjct: 23  MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA--- 79

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYE 108
           +  + D+SD   + +    +  +FG LDI+          A +      +W +       
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET------ 133

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                +  N  GT  T    +P L+      +V +SS ++  +                 
Sbjct: 134 -----IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSS-INGTRT---------------- 171

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                                  G     +AY  +KA   A  + LA    K    VN V
Sbjct: 172 -------------------FTTPGA----TAYTATKAAQVAIVQQLALELGKHHIRVNAV 208

Query: 227 CPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           CPG ++T+I      L  EE    PV+          G+ 
Sbjct: 209 CPGAIETNI-SDNTKLRHEEETAIPVEWPKGQVPITDGQP 247

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  109 bits (275), Expect = 8e-29
 Identities = 58/275 (21%), Positives = 91/275 (33%), Gaps = 76/275 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++   +     D
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCD 78

Query: 67  ISDLASVSSLADFIKTQF-GKLDIL------------TKGDAEVDWSKVCYQTYELAVEC 113
           +        L   +   F GKL+IL                 + D++ +           
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK-DYNII----------- 126

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           + TN+       +   PLL+ S +  ++ LSS                            
Sbjct: 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA-------------------------- 160

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                       G  A        S Y  SK  IN  T+ LA  + K    VN V PG +
Sbjct: 161 ------------GFSALPS----VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVI 204

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            T +      +      +  +   +     P GR 
Sbjct: 205 LTPLV--ETAIKKNPHQKEEIDNFI--VKTPMGRA 235

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  109 bits (274), Expect = 1e-28
 Identities = 46/275 (16%), Positives = 86/275 (31%), Gaps = 77/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG   GIG      L + G +V++  R+  +   AV++L+A G +   + +   D
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD 71

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAVEC 113
           I++    +   D +    G+L  +             T+ D+E  W +       + +  
Sbjct: 72  ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSE-AWRRT------VDL-N 123

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           +    Y  K         +        V +SS                            
Sbjct: 124 VNGTMYVLK----HAAREMVRGGGGSFVGISSIA-------------------------- 153

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFV 231
                           +R       AY V+K+ ++   ++ A         VN + PG +
Sbjct: 154 ------------ASNTHRW----FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLI 197

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +TD+        V    ES    +      P  R 
Sbjct: 198 RTDL--------VAAITESAELSSDYAMCTPLPRQ 224

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  108 bits (272), Expect = 2e-28
 Identities = 49/248 (19%), Positives = 86/248 (34%), Gaps = 70/248 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+  + + AVVTG+++GIG    R+L S G  VVLTARD ++      ++ A+G +    
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---A 80

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
             H  D+S   ++++ A  +    G+ D+L                   +W  +      
Sbjct: 81  ESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL------ 134

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                +  N         A  P +  +    ++N+SS                       
Sbjct: 135 -----IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLA--------------------- 168

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                            G+          +AY  SK  +N      A+   +    V+ V
Sbjct: 169 -----------------GKNPVAD----GAAYTASKWGLNGLMTSAAEELRQHQVRVSLV 207

Query: 227 CPGFVKTD 234
            PG V+T+
Sbjct: 208 APGSVRTE 215

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  106 bits (268), Expect = 6e-28
 Identities = 44/241 (18%), Positives = 77/241 (31%), Gaps = 68/241 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+  GIG       A  G +VV+T    +        ++ +G      +  + +
Sbjct: 13  AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---AIGLECN 69

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA----EVDWSKVCYQTYELAVECLKT 116
           ++D     ++      QFGK+ +L                 D+               K 
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWA-----------FKL 118

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N +   +  +   P ++ +    ++N+SS                               
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMA----------------------------- 149

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                    GE  N       ++Y  SKA +N  TR +A         VN + PG +KTD
Sbjct: 150 ---------GENTNVR----MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD 196

Query: 235 I 235
            
Sbjct: 197 A 197

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  106 bits (268), Expect = 8e-28
 Identities = 48/242 (19%), Positives = 73/242 (30%), Gaps = 70/242 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VT S  GIG    R+LA  G  VV+++R ++     V  L+  G+    +      
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---VTGTVCH 71

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           +        L        G +DIL                 E  W K+           L
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI-----------L 120

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N   T    +A++P +E      ++ +SS                             
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVG--------------------------- 153

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                                    Y VSK  +   T+ LA         VNC+ PG +K
Sbjct: 154 -----------AYHPFPN----LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIK 198

Query: 233 TD 234
           T+
Sbjct: 199 TN 200

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  106 bits (267), Expect = 8e-28
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 68/241 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA----EVDWSKVCYQTYELAVECLKT 116
           I+    +S+LADF  ++ GK+DIL                 D+ +             + 
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRA-----------YEL 117

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N +      + + P +E +    ++ ++S                               
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMA----------------------------- 148

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                     E  N       ++Y  SKA  +   R +A    +    VN + PG + TD
Sbjct: 149 ---------AENKNIN----MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195

Query: 235 I 235
            
Sbjct: 196 A 196

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  106 bits (267), Expect = 1e-27
 Identities = 49/244 (20%), Positives = 73/244 (29%), Gaps = 70/244 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  KGIG   V + A  G  +   AR+E    E + K +  G     +     D
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCD 71

Query: 67  ISDLASVSSLADFIKTQFG-KLDIL------TKGDA-----EVDWSKVCYQTYELAVECL 114
            S       L   + + FG KLDIL       +          D+S             +
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH-----------I 120

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
            TN        +   PLL+ S    ++ +SS                             
Sbjct: 121 STNLESAYHLSQLAHPLLKASGCGNIIFMSSIA--------------------------- 153

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G ++        S Y  +K  +N   R LA  +       N V P  + 
Sbjct: 154 -----------GVVSASV----GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIA 198

Query: 233 TDIN 236
           T + 
Sbjct: 199 TPLA 202

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  106 bits (266), Expect = 1e-27
 Identities = 60/281 (21%), Positives = 87/281 (30%), Gaps = 82/281 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
           M     K A+V G   G+G  TVR+L   G  V+LT R+E       E+   +   +   
Sbjct: 3   MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL--- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDA------EVDWSKVCYQTY 107
                + DI+DL  ++ L        G +D+L                E  + +      
Sbjct: 60  -----RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQ----- 109

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                    N  G   T + L PL  + +   +V  SS                      
Sbjct: 110 ------FAVNTKGAFFTVQRLTPL--IREGGSIVFTSSVA-------------------- 141

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KFCVNC 225
                              E  +    P  S Y  SKA + ++  +LA         VN 
Sbjct: 142 ------------------DEGGH----PGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179

Query: 226 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           V PGF+ T     AGI      AE      L  +  P  R 
Sbjct: 180 VSPGFIDTPTKGVAGI----TEAERAEFKTLGDNITPMKRN 216

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  105 bits (265), Expect = 2e-27
 Identities = 48/276 (17%), Positives = 89/276 (32%), Gaps = 74/276 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  V++G    +G    R+ A +G  +VL AR  +R  +  +++  +G      L    D
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA---LSVGTD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAVEC 113
           I+D A V+ L D     +G++D++                  E                 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFE-HMRDA----------- 116

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           ++   +G  +  +   P LE S    +VN++S V                          
Sbjct: 117 IELTVFGALRLIQGFTPALEES-KGAVVNVNSMV-------------------------- 149

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                          +         AYK++K+ + A ++ LA    +    VN V PG++
Sbjct: 150 ------------VRHSQAK----YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYI 193

Query: 232 KTD-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
               +  +    + + G            G    R 
Sbjct: 194 WGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRL 229

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  105 bits (264), Expect = 3e-27
 Identities = 48/244 (19%), Positives = 80/244 (32%), Gaps = 70/244 (28%)

Query: 7   KYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VT  +  GIG  T R+   +G  VV++   E+R  E  ++L   G+    +     
Sbjct: 23  KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR--VEAVVC 80

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           D++   +V +L      + G+LD+L                 + +W +V      L V  
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRV------LNV-T 132

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           L +    T+    AL     +     +VN +S +                          
Sbjct: 133 LTSVMRATR---AALRYFRGVDHGGVIVNNASVL-------------------------- 163

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                       G  A        S Y  +KA + A TR  A    +F   +N V P   
Sbjct: 164 ------------GWRAQHS----QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIA 207

Query: 232 KTDI 235
           +   
Sbjct: 208 RHKF 211

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  104 bits (263), Expect = 4e-27
 Identities = 55/275 (20%), Positives = 91/275 (33%), Gaps = 79/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  V+TGS+ G+G     + A++   VV+     E      +E++K  G +    +  + 
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA---IAVKG 64

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           D++  + V +L      +FGKLD++                   DW+KV      +    
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKV------IDTN- 116

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           L   + G++   EA+   +E      ++N+SS                            
Sbjct: 117 LTGAFLGSR---EAIKYFVENDIKGTVINMSSVH-------------------------- 147

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                        +I      P    Y  SK  +   T  LA  Y      VN + PG +
Sbjct: 148 ------------EKIPW----PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAI 191

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            T IN         E    P + A +    P G  
Sbjct: 192 NTPIN--------AEKFADPEQRADVESMIPMGYI 218

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  104 bits (263), Expect = 5e-27
 Identities = 52/275 (18%), Positives = 91/275 (33%), Gaps = 70/275 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK        +L   +D
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           ++    V ++ + +++ FG  DIL     T  +  +       W               +
Sbjct: 66  VATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFY-----------WE 114

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
                  +    L+P +       +++ +S + A++ L  +                   
Sbjct: 115 LLVMAAVRLARGLVPGMRARGGGAIIHNAS-ICAVQPLWYEP------------------ 155

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                                   Y V+KA +  +++ LA    K    VNC+ PG + T
Sbjct: 156 -----------------------IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192

Query: 234 DI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                    +     G       ++  +  P  RF
Sbjct: 193 PDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRF 227

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  104 bits (262), Expect = 6e-27
 Identities = 50/275 (18%), Positives = 83/275 (30%), Gaps = 81/275 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K AV+TG+  GIG    ++  ++G  V +T R +     A+ ++   A G+        Q
Sbjct: 30  KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGI--------Q 81

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----TKGDA------EVDWSKVCYQTYELAVEC 113
            D ++LA +  L + +K + G++D+L                E  +              
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDT----------- 130

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
              N  G   T +  +PL  L+    +V   S                G           
Sbjct: 131 FDRNVKGVLFTVQKALPL--LARGSSVVLTGSTA-----------GSTGT---------- 167

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                                P  S Y  SKA + ++ R            +N + PG  
Sbjct: 168 ---------------------PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPT 206

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +T            +       L  L    P GR 
Sbjct: 207 ETTGLVELAGKDPVQQQG---LLNALAAQVPMGRV 238

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  103 bits (260), Expect = 8e-27
 Identities = 53/274 (19%), Positives = 85/274 (31%), Gaps = 76/274 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+  GIG    ++ A     VV     E R  + V++L+  G +   +L  + D
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---VLGVKAD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYELAVECL 114
           +S    V          + ++D+L        G   V       W +V      LAV  L
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV------LAV-NL 117

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
            + +Y ++    A+IP++       +VN +S                             
Sbjct: 118 YSAFYSSR----AVIPIMLKQGKGVIVNTASIA--------------------------- 146

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G           + Y V+K  +   TR +A  Y         V PG VK
Sbjct: 147 -----------GIRGGFA----GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVK 191

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T+      I              L      + R 
Sbjct: 192 TN------IGLGSSKPSELGMRTLTKLMSLSSRL 219

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  104 bits (261), Expect = 8e-27
 Identities = 50/245 (20%), Positives = 86/245 (35%), Gaps = 72/245 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G     +     D
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---VEASVCD 66

Query: 67  ISDLASVSSLADFIKTQF-GKLDIL------------TKGDAEVDWSKVCYQTYELAVEC 113
           +S  +    L + +   F GKL+IL                 E D+S +           
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE-DYSLI----------- 114

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           +  N+           P L+ S+   +V +SS                            
Sbjct: 115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVS-------------------------- 148

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                       G +A        + Y  +K  ++  TR LA  + K    VN V PG +
Sbjct: 149 ------------GALAVPY----EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI 192

Query: 232 KTDIN 236
            T + 
Sbjct: 193 ATSLV 197

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  103 bits (260), Expect = 9e-27
 Identities = 54/249 (21%), Positives = 75/249 (30%), Gaps = 71/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M +   +  VVTG  KGIG       A  G  V +  R        V  L   G     +
Sbjct: 5   MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK--V 62

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
           +  Q D+SD A   +LA     +FG +D++         DA          + +      
Sbjct: 63  IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGI------ 115

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                   N  GT    +A +  L  S S R+V  SS                       
Sbjct: 116 -----FAVNVNGTFYAVQACLDALIASGSGRVVLTSSIT--------------------- 149

Query: 169 EERIEMVVKDYFKDYEEGEIA-NRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNC 225
                            G I    GW    S Y  +KA    + R  A         VN 
Sbjct: 150 -----------------GPITGYPGW----SHYGATKAAQLGFMRTAAIELAPHKITVNA 188

Query: 226 VCPGFVKTD 234
           + PG + T+
Sbjct: 189 IMPGNIMTE 197

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  103 bits (259), Expect = 1e-26
 Identities = 51/249 (20%), Positives = 81/249 (32%), Gaps = 72/249 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS++G+G     +LA  G  +V+  AR +K  LE  E+++  GV    +L  + 
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVKA 61

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           ++   A +  +   I   FG+LD+                  E  W              
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWT----------- 109

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           +  N        +    L+E +    +V++SS                            
Sbjct: 110 MNINAKALLFCAQEAAKLMEKNGGGHIVSISSLG-------------------------- 143

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                                 + +   VSKA + A TR LA         VN V  G +
Sbjct: 144 ------------SIRYL----ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAI 187

Query: 232 KTDINFHAG 240
            TD   H  
Sbjct: 188 DTDALKHFP 196

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  103 bits (259), Expect = 2e-26
 Identities = 51/280 (18%), Positives = 90/280 (32%), Gaps = 76/280 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+   IG  T  +LA +G  + L   + +   +A   ++  GV+      +  D
Sbjct: 8   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA---RSYVCD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYELAVECL 114
           ++   +V    D +   FGK+D L          A V      D+++V      L +  +
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV------LTI-NV 117

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
              ++  K    A+   +   +  R+VN +S                             
Sbjct: 118 TGAFHVLK----AVSRQMITQNYGRIVNTASMA--------------------------- 146

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G           +AY  SK  I A T   A     +   VN + PG++ 
Sbjct: 147 -----------GVKGPPN----MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMG 191

Query: 233 TD------INFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                   +   A + S     +  V    +    P  R+
Sbjct: 192 PGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRY 231

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  103 bits (258), Expect = 2e-26
 Identities = 42/274 (15%), Positives = 86/274 (31%), Gaps = 70/274 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G  T  +LA++G  + L     +    +   +  +  D E +L    D
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD 72

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYELAVECL 114
           +SD A V +       +FG++D                     ++ KV      +++  L
Sbjct: 73  VSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV------VSI-NL 125

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           +  + G +     ++ ++    S  +VN +S                             
Sbjct: 126 RGVFLGLE----KVLKIMREQGSGMVVNTASVG--------------------------- 154

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G           S Y  +K  +   TR  A  Y ++   +N + PG + 
Sbjct: 155 -----------GIRGIGN----QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIW 199

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T +      +   +               P+ R+
Sbjct: 200 TPMV--ENSMKQLDPENPRKAAEEFIQVNPSKRY 231

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  102 bits (256), Expect = 4e-26
 Identities = 43/275 (15%), Positives = 91/275 (33%), Gaps = 74/275 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K  A++TG+++GIG      LA+ G  VVL AR ++   +  +++  S    +  +   
Sbjct: 6   QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLP 65

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEVDWSKVCYQTYELAVEC 113
           LDI+D     +    I  ++G +DIL                + ++ K+           
Sbjct: 66  LDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD-NFRKI----------- 113

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           ++ N        + +  ++++  +  + N++S                            
Sbjct: 114 MEINVIAQYGILKTVTEIMKVQKNGYIFNVASRA-------------------------- 147

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFV 231
                        +            Y  +K  +      L +        V  +CPG+V
Sbjct: 148 ------------AKYGF----ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWV 191

Query: 232 KTDINFHAG-------ILSVEEGAESPVKLALLPD 259
            TD+   AG       ++  ++   +   L  L +
Sbjct: 192 NTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSE 226

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  102 bits (256), Expect = 5e-26
 Identities = 46/245 (18%), Positives = 76/245 (31%), Gaps = 70/245 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A VTGS+ GIG+      A  G  V +         +A    K  GV       ++ +
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---SKAYKCN 91

Query: 67  ISDLASVSSLADFIKTQFGKLDIL--------------TKGDAEVDWSKVCYQTYELAVE 112
           ISD  SV       +  FG +D+                  + +  W+K+          
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYD-SWNKI---------- 140

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +  +  G       +  + + +    L+  SS                           
Sbjct: 141 -ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSS--------------------------- 172

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC-VNCVCPGFV 231
            +           G+I N       + Y  +KA      + LA  +  F  VN + PG++
Sbjct: 173 -IS----------GKIVNIP--QLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYI 219

Query: 232 KTDIN 236
            TDI 
Sbjct: 220 DTDIT 224

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  102 bits (256), Expect = 6e-26
 Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 75/255 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M +  +  A+VTG  +GIG    R LA+ G  + +T   D +     + +L   G     
Sbjct: 24  MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--- 80

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGD-------AEVDWSKVCYQT 106
           ++F + D++DL+S  +  D +  +FG++D L                    ++  +    
Sbjct: 81  VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI---- 136

Query: 107 YELAVECLKTNYYGTKQTCEALIPLL---ELSDSPRLVNLSSYVSALKDLPEKARAVLGD 163
                  +  N  GT    +A++  +   +   S  ++N++S                  
Sbjct: 137 -------VGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS---------------- 173

Query: 164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 221
                                   + +         Y +SKA + A+++ LA R  +   
Sbjct: 174 ----------------------AVMTSPE----RLDYCMSKAGLAAFSQGLALRLAETGI 207

Query: 222 CVNCVCPGFVKTDIN 236
            V  V PG +++D+ 
Sbjct: 208 AVFEVRPGIIRSDMT 222

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  101 bits (254), Expect = 6e-26
 Identities = 50/275 (18%), Positives = 83/275 (30%), Gaps = 77/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL--TARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  +VTG ++GIG   V  L S     V+   AR E    +  EK            +  
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRF------FYVV 56

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAV 111
            DI++ + +  L +      GK+D L              + D    W K+         
Sbjct: 57  GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVN-AWKKL--------- 106

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
                N++         +P L+ + +  +V +SS                          
Sbjct: 107 --YDINFFSIVSLVGIALPELKKT-NGNVVFVSSDA------------------------ 139

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV 231
                           +    W     AY  SKA +N +   LA    +     V PG V
Sbjct: 140 --------------CNMYFSSW----GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIV 181

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            TD+  +    +V   + S  +L +        + 
Sbjct: 182 DTDMQVNIR-ENVGPSSMSAEQLKMFRGLKENNQL 215

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  101 bits (254), Expect = 7e-26
 Identities = 36/243 (14%), Positives = 73/243 (30%), Gaps = 72/243 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +    ++TG+++ +G     +L   G  V+++ R E   +  + +  A  +         
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVAL--------Y 77

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL----------TKGDAEVDWSKVCYQTYELAVECL 114
            D S    + +  D +KTQ   L  +          T G+   +++++            
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM-----------F 126

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             +            PLL  S+   +V++S  V                           
Sbjct: 127 SVHMLAPYLINLHCEPLLTASEVADIVHISDDV--------------------------- 159

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT 233
                          +        AY  +KA + + T   A R+ P   VN + P  +  
Sbjct: 160 -----------TRKGS----SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMF 204

Query: 234 DIN 236
              
Sbjct: 205 QPK 207

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  101 bits (255), Expect = 7e-26
 Identities = 52/250 (20%), Positives = 95/250 (38%), Gaps = 71/250 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYEL 109
                D+  +  + +L   +  ++G +D+L        G      A+  W  V       
Sbjct: 77  ---TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDV------- 126

Query: 110 AVECLKTNYYGTKQTCEALIPLLEL--SDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
               ++TN  G  +  + ++    +    + R+VN++S                      
Sbjct: 127 ----VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-------------------- 162

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNC 225
                             G+       P    Y  SK  +  +T+ L     +    VN 
Sbjct: 163 ------------------GKQGVVHAAP----YSASKHGVVGFTKALGLELARTGITVNA 200

Query: 226 VCPGFVKTDI 235
           VCPGFV+T +
Sbjct: 201 VCPGFVETPM 210

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  101 bits (254), Expect = 1e-25
 Identities = 53/280 (18%), Positives = 81/280 (28%), Gaps = 75/280 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+    K A+VTG++ GIG       A +G  VV+TAR+     E  +++   G +    
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE---A 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYE 108
                D+ D A   +L +    +FG LD             E+       W +       
Sbjct: 60  AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET------ 113

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
           L    L + +   K      +P +       L   SS+V                     
Sbjct: 114 LDT-NLTSAFLAAK----YQVPAIAALGGGSLTFTSSFVGHT------------------ 150

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                                  G+    + Y  SKA +    + LA         VN +
Sbjct: 151 ----------------------AGF-AGVAPYAASKAGLIGLVQALAVELGARGIRVNAL 187

Query: 227 CPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            PG   T  NF     +  E       L          R 
Sbjct: 188 LPGGTDTPANFANLPGAAPETRGFVEGLH------ALKRI 221

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  100 bits (252), Expect = 1e-25
 Identities = 49/270 (18%), Positives = 81/270 (30%), Gaps = 69/270 (25%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            V++G   GIG  T + L + G  +V     +      V                  D+S
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEV----------------IADLS 43

Query: 69  DLASV-SSLADFIKTQFGKLDILTK----GDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
                  ++AD +      +D L      G        V           +  NY+G  +
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNV-----------VSVNYFGATE 92

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A +P L+    P  V +SS V++     +K    L        +   +V        
Sbjct: 93  LMDAFLPALKKGHQPAAVVISS-VASAHLAFDKNPLALALEAGEEAKARAIV-------- 143

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------RYPKFCVNCVCPGFVKTDIN 236
                 + G    + AY  SK  +    R  A        R     +N + PG  +T + 
Sbjct: 144 -----EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVR-----LNTIAPGATETPLL 193

Query: 237 FHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                L      E     ++     P GR 
Sbjct: 194 --QAGLQDPRYGE-----SIAKFVPPMGRR 216

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  101 bits (253), Expect = 2e-25
 Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 68/244 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG++ GIG +     A  G  V + AR         +++   G      L  + D
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---ALPIRCD 89

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           ++    V  + D +  + G +DI        +          ++ ++             
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI-----------QD 138

Query: 116 TNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           TN  G   T   A   +++      ++  +S                            M
Sbjct: 139 TNVTGVFLTAQAAARAMVDQGLGGTIITTAS----------------------------M 170

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                      G I N       S Y  SKA +   T+ +A         VN V PG+++
Sbjct: 171 S----------GHIINIP--QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR 218

Query: 233 TDIN 236
           T++ 
Sbjct: 219 TELV 222

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 99.9 bits (250), Expect = 2e-25
 Identities = 48/245 (19%), Positives = 78/245 (31%), Gaps = 75/245 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTGS  GIG      LA +G  VV+   + +      +++ A G      +   +D
Sbjct: 10  KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---AISVAVD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDIL---------TKGD-----AEVDWSKVCYQTYELAVE 112
           +SD  S  ++AD    +FG +D L          K D         + K           
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF---------- 116

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +  N  G      A+   +       +VN SS             A L           
Sbjct: 117 -MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA-----------AWLY---------- 154

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                                   S+ Y ++K  IN  T+ L++        +N + PG 
Sbjct: 155 ------------------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGP 190

Query: 231 VKTDI 235
           + T+ 
Sbjct: 191 IDTEA 195

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =   99 bits (250), Expect = 3e-25
 Identities = 44/250 (17%), Positives = 78/250 (31%), Gaps = 78/250 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K  V+TG+++GIG   VR    +   VV T+R  K   +              +
Sbjct: 23  MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD------------I 70

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
                DIS   +   +      +FG++D L                 + D+         
Sbjct: 71  HTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHN------ 123

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L  N  G     +     +    S  +V++++ +                     
Sbjct: 124 -----LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSL--------------------- 157

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                             +    G    S+   ++K  +NA TR LA  + +    VN V
Sbjct: 158 -----------------VDQPMVGMP--SALASLTKGGLNAVTRSLAMEFSRSGVRVNAV 198

Query: 227 CPGFVKTDIN 236
            PG +KT ++
Sbjct: 199 SPGVIKTPMH 208

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =   99 bits (250), Expect = 3e-25
 Identities = 55/282 (19%), Positives = 86/282 (30%), Gaps = 76/282 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + + + + A+VTG +KGIG    R L   G TV +   D       V  L+  G      
Sbjct: 7   IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF----- 61

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
              ++D++  ASV +         G  D+L      +          + +W         
Sbjct: 62  -AVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFN------ 113

Query: 109 LAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                   N  G     +      L  +    +VN +S                      
Sbjct: 114 -----FDVNARGVFLANQIACRHFLASNTKGVIVNTASLA-------------------- 148

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNC 225
                              ++         + Y  SK  +  +T+ LA+        VNC
Sbjct: 149 ------------------AKVGAPL----LAHYSASKFAVFGWTQALAREMAPKNIRVNC 186

Query: 226 VCPGFVKTDINFHAGILSVEEGAESPVKL-ALLPDGGPTGRF 266
           VCPGFVKT +     I   E    +P  + A      P GR 
Sbjct: 187 VCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRI 228

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  100 bits (251), Expect = 3e-25
 Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 71/251 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 + A+VTG   G+G    + L+++G +VV+T R       A  ++        ++
Sbjct: 28  KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIV 85

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYE 108
                D+ D   V++L   ++ +F +LD+L            +       W+ +      
Sbjct: 86  RAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGI------ 139

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPEKARAVLGDVEN 166
                +  N  G     +    +++       R++N  S                     
Sbjct: 140 -----VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSIS------------------- 175

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 224
                               +       P+S+ Y  +K  I   T+  A           
Sbjct: 176 -------------------AQTPR----PNSAPYTATKHAITGLTKSTALDGRMHDIACG 212

Query: 225 CVCPGFVKTDI 235
            +  G   TD+
Sbjct: 213 QIDIGNAATDM 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 98.8 bits (247), Expect = 4e-25
 Identities = 32/277 (11%), Positives = 72/277 (25%), Gaps = 81/277 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +  + +VTG+  G+G      L  +G  V +  R  +R  +    L         ++   
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGIV 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVE 112
            D++    V           G  +++                AE    +V          
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAE-QIRRV---------- 104

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +++N   T    +  + L+       L N+ S                           
Sbjct: 105 -MESNLVSTILVAQQTVRLI-GERGGVLANVLSSA------------------------- 137

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGF 230
                         ++       + S Y  SK  +  +   L          +  + P  
Sbjct: 138 -------------AQVGK----ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSG 180

Query: 231 VKTDINFHA------GILSVEEGAESPVKLALLPDGG 261
           ++++   +       G ++ E+ A   +         
Sbjct: 181 IRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSC 217

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  100 bits (251), Expect = 4e-25
 Identities = 46/249 (18%), Positives = 80/249 (32%), Gaps = 70/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           ++    + AVVTG   GIG  T  + A +G  +VL+  D+    +AV  L+  G D    
Sbjct: 26  LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---A 82

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV----DWSKVCYQTYEL 109
                D+  L  +  LAD      G +D++         G        DW  V      +
Sbjct: 83  HGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWV------I 136

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVLGDVENLT 168
            +     + +G+    EA +P L    +   +   +S              ++ +     
Sbjct: 137 DI-----DLWGSIHAVEAFLPRLLEQGTGGHIAFTAS-----------FAGLVPN----- 175

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                                          Y V+K  +      LA+        V+ +
Sbjct: 176 --------------------------AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVL 209

Query: 227 CPGFVKTDI 235
           CP  V+T +
Sbjct: 210 CPMVVETKL 218

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 75/251 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M++  KK A+VTG+  G+G      LA  G  V L  R      E   ++          
Sbjct: 23  MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDA------ 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDA-------EVDWSKVCYQTYE 108
           L    D++D  SV +L      +FG++D+L     T   A          W +V      
Sbjct: 77  LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQV------ 130

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPEKARAVLGDVEN 166
                + TN  G     +    +++  +    R++N  S +SA                 
Sbjct: 131 -----VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS-ISAT---------------- 168

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 224
                                       P+S+ Y  +K  I   T+  +           
Sbjct: 169 ------------------------SPR-PYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203

Query: 225 CVCPGFVKTDI 235
            +  G   T +
Sbjct: 204 QIDIGNADTPM 214

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 99.1 bits (248), Expect = 5e-25
 Identities = 51/275 (18%), Positives = 85/275 (30%), Gaps = 79/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A++TG+ KGIG +  R  A+ G  +VL+ RD      A   L +  G D   +    +
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD---VHTVAI 77

Query: 66  DISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECL 114
           D+++  + + LA      FG LD+L                   +              +
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDAT-----------I 126

Query: 115 KTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
             N         A+   ++   +   ++ ++S                            
Sbjct: 127 AVNLRAPALLASAVGKAMVAAGEGGAIITVASAA-------------------------- 160

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                                P   AY  SKA +   T++LA+         N VCP  V
Sbjct: 161 ------------ALAPL----PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVV 204

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            T++         +       K A +    P GRF
Sbjct: 205 LTEMG--------QRVWGDEAKSAPMIARIPLGRF 231

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 99.2 bits (248), Expect = 8e-25
 Identities = 60/279 (21%), Positives = 94/279 (33%), Gaps = 74/279 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             + A VTG + GIG    R LA++GI V   ARD K    AV+ L+A+G D   +    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---VDGSS 79

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYELAVEC 113
            D++    V +       +FG + IL        G       +  W+ V           
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADV----------- 128

Query: 114 LKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
           L TN  G  +    ++    + +    R+VN++S                          
Sbjct: 129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG------------------------ 164

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                         G+         ++ Y  SK  +  +T+ +     K    VN VCPG
Sbjct: 165 --------------GKQGVMY----AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPG 206

Query: 230 FVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +V+T +      G        E  V         P GR+
Sbjct: 207 YVETPMAERVREGYARHWGVTEQEVHERFN-AKIPLGRY 244

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 98.3 bits (246), Expect = 9e-25
 Identities = 50/245 (20%), Positives = 80/245 (32%), Gaps = 73/245 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG     +   +G  V++T R    G +A + +         + F Q D
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----IQFFQHD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV----DWSKVCYQTYELAVECLK 115
            SD    + L D  +  FG +  L            E     +W K+      LAV  L 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL------LAV-NLD 115

Query: 116 TNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             ++GT+      I  ++       ++N+SS +                           
Sbjct: 116 GVFFGTR----LGIQRMKNKGLGASIINMSS-IEGF------------------------ 146

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC----VNCVCPGF 230
                            G  P   AY  SK  +   ++  A           VN V PG+
Sbjct: 147 ----------------VGD-PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGY 189

Query: 231 VKTDI 235
           +KT +
Sbjct: 190 IKTPL 194

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 97.9 bits (245), Expect = 1e-24
 Identities = 49/274 (17%), Positives = 80/274 (29%), Gaps = 81/274 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG   GIG     + A +G  + +         EA   ++  G     +L  + D
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---VLTVKCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           +S    V +    + + FG+ DIL                    W K             
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKT-----------F 110

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           + N        +A +P ++ +   R++NL+S                             
Sbjct: 111 EINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT--------------------------- 143

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                        +    +    + Y  +KA    +TR LA    K    VN + P  V+
Sbjct: 144 -----------YWLKIEAY----THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVR 188

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T           E  A S +   L        R 
Sbjct: 189 TAT--------TEASALSAMFDVLPNMLQAIPRL 214

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 54/249 (21%), Positives = 80/249 (32%), Gaps = 71/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + + +  +VTG  KGIG       A  G  V + AR  +       +L   G     +
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGN--V 93

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
           +  +LD+SD  S +  A  +   FG LD++         +A          S+V      
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEV------ 146

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L  N  GT  T +A +  L  S   R++  SS                       
Sbjct: 147 -----LDVNVKGTVYTVQACLAPLTASGRGRVILTSSIT--------------------- 180

Query: 169 EERIEMVVKDYFKDYEEGEIA-NRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNC 225
                            G +    GW    S Y  SKA    + R  A         VN 
Sbjct: 181 -----------------GPVTGYPGW----SHYGASKAAQLGFMRTAAIELAPRGVTVNA 219

Query: 226 VCPGFVKTD 234
           + PG + T+
Sbjct: 220 ILPGNILTE 228

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 98.4 bits (246), Expect = 1e-24
 Identities = 56/279 (20%), Positives = 96/279 (34%), Gaps = 79/279 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E T K A+VTG + GIG   V  L   G  VV  + DEK  +   +            
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD------------ 56

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYEL 109
              ++D+++   V    +    ++G++DIL      +  + +       W ++      +
Sbjct: 57  -HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRI------I 109

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
            V  +  +Y   K      IP++       ++N++S                        
Sbjct: 110 DV-NVNGSYLMAK----YTIPVMLAIGHGSIINIASVQ---------------------- 142

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCP 228
                              A      +++AY  SK  +   TR +A  Y PK   N VCP
Sbjct: 143 ----------------SYAAT----KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCP 182

Query: 229 GFVKTDINFHAGILSVEEGAESPVK-LALLPDGGPTGRF 266
           G + T +   A  + V E   +  + +       P GR 
Sbjct: 183 GTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRI 221

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 48/279 (17%), Positives = 90/279 (32%), Gaps = 80/279 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
            ++   K  +VTG++ GIG     +   +G  V+  +  +    +               
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD------------- 49

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYEL 109
              + D+++   V +  D I  ++G + +L      +   ++      +W ++      +
Sbjct: 50  -HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRI------I 102

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
            V  L   YY +K      IP +  S  P +VN+SS                        
Sbjct: 103 DVN-LFGYYYASK----FAIPYMIRSRDPSIVNISSVQ---------------------- 135

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCP 228
                             I       ++SAY  SK  +   T+ +A  Y P    N VCP
Sbjct: 136 ----------------ASIIT----KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCP 175

Query: 229 GFVKTDIN-FHAGILSVEEGAESPVKLALLPDGGPTGRF 266
             + T +    A +    +      K++      P  R 
Sbjct: 176 ATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRI 214

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 97.2 bits (243), Expect = 3e-24
 Identities = 49/279 (17%), Positives = 76/279 (27%), Gaps = 79/279 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K  +VTG  +GIG    +  A +G  V L     + G E  E +          
Sbjct: 1   MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGG-------- 51

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYEL 109
            F Q+D+ D        +      G++D+L                  +W +V      L
Sbjct: 52  AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRV------L 105

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
            V  L    + +          +       +VN++S                        
Sbjct: 106 EVN-LTAPMHLSA----LAAREMRKVGGGAIVNVASVQ---------------------- 138

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVC 227
                           G  A +      +AY  SK  +   TR LA         VN V 
Sbjct: 139 ----------------GLFAEQEN----AAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178

Query: 228 PGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           PG + T+    A    +    +         D     R 
Sbjct: 179 PGAIATEAVLEA----IALSPDPERTRRDWEDLHALRRL 213

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 47/277 (16%), Positives = 79/277 (28%), Gaps = 77/277 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A++TG   G+G   V +  ++G  V +  +  +R  E       +       +    D
Sbjct: 6   EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNA------VGVVGD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDIL----------------TKGDAEVDWSKVCYQTYELA 110
           +  L      A+     FGK+D L                 +   +  +  +        
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDI-------- 111

Query: 111 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEE 170
                 N  G     +A +P L +S    +V   S                         
Sbjct: 112 ---FHVNVKGYIHAVKACLPAL-VSSRGSVVFTISNA----------------------- 144

Query: 171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPG 229
                          G   N G       Y  +K  +    R +A    P   VN V PG
Sbjct: 145 ---------------GFYPNGG----GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPG 185

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            + TD+   + +   E+   S     +L    P GR 
Sbjct: 186 GMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRM 222

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 97.2 bits (243), Expect = 3e-24
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 81/277 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG++ G G     +  ++G  V       +   E       A       +L  + 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK---VLRVRA 59

Query: 66  DISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV---------DWSKVCYQTYELAV 111
           D++D   V++       QFG +D+L       G++E           + KV      +AV
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKV------MAV 113

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             ++  + G +    A++P + L  +  +VN++S V++L                     
Sbjct: 114 N-VRGIFLGCR----AVLPHMLLQGAGVIVNIAS-VASL--------------------- 146

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                                + P  SAY  SK  +   T+ +A  Y       N VCPG
Sbjct: 147 -------------------VAF-PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPG 186

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            ++T +         +   + P     +    P    
Sbjct: 187 MIETPM--------TQWRLDQPELRDQVLARIPQKEI 215

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 57/283 (20%), Positives = 94/283 (33%), Gaps = 73/283 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPE 58
                 K AV+TGS  GIG    R LA  G  +VL        +  V  E    S     
Sbjct: 20  FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT-- 77

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTY 107
            +L H  D++  + ++ +   +  +FG  DIL      +   ++       W ++     
Sbjct: 78  -VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRI----- 131

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                 +  N   +  T    IP ++     R++N++S                      
Sbjct: 132 ------IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAH-------------------- 165

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNC 225
                             G +A+    P  SAY  +K  I   T+ +A    +    VN 
Sbjct: 166 ------------------GLVAS----PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNS 203

Query: 226 VCPGFVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +CPG+V T +               E  V   ++  G PT +F
Sbjct: 204 ICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKF 246

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 97.3 bits (243), Expect = 5e-24
 Identities = 46/260 (17%), Positives = 82/260 (31%), Gaps = 63/260 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K  +VTG++KGIG E    LA  G  VV+TAR ++  L+ V       G      +    
Sbjct: 29  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET-LQKVVSHCLELGAASAHYI--AG 85

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEV------DWSKVCYQTYELAVECLKTNYY 119
            + D+              G LD+L      +          + +       + ++ N+ 
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNFL 139

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                  A +P+L+ S +  +V +SS                                  
Sbjct: 140 SYVVLTVAALPMLKQS-NGSIVVVSSLA-------------------------------- 166

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL----AKRYPKFCVNCVCPGFVKTDI 235
                 G++A     P  +AY  SK  ++ +   +    +       +     G + T+ 
Sbjct: 167 ------GKVAY----PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET 216

Query: 236 NFHAGILSVEEGAESPVKLA 255
              A    V   A    + A
Sbjct: 217 AMKAVSGIVHMQAAPKEECA 236

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 96.5 bits (241), Expect = 5e-24
 Identities = 43/256 (16%), Positives = 74/256 (28%), Gaps = 75/256 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPEL 59
             +   K  ++TGS++GIG  T R  A  G  V L  R     ++     ++A G D   
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDA-- 59

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGD-----AEVDWSKVCYQTY 107
             F   D++   +   L D    +FG +D+L                 +  +  V     
Sbjct: 60  -AFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAV----- 113

Query: 108 ELAVECLKTNYYGTKQTCEALIPLL-----ELSDSPRLVNLSSYVSALKDLPEKARAVLG 162
                 +  N      T +  +P L         +  +++  S                 
Sbjct: 114 ------MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIA--------------- 152

Query: 163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 221
                                  G        P +  Y  +KA ++   +     + K  
Sbjct: 153 -----------------------GHTGGG---PGAGLYGAAKAFLHNVHKNWVDFHTKDG 186

Query: 222 -CVNCVCPGFVKTDIN 236
              N V PG V T  +
Sbjct: 187 VRFNIVSPGTVDTAFH 202

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 96.9 bits (242), Expect = 6e-24
 Identities = 54/285 (18%), Positives = 89/285 (31%), Gaps = 78/285 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
            A    K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 83

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYE 108
           +   + ++  +  +  + +     FGKLDI+                  ++ +V      
Sbjct: 84  V---KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRV------ 134

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                   N  G           LE     RL+ + S              + G  + + 
Sbjct: 135 -----FTINTRGQFFVAREAYKHLE--IGGRLILMGS--------------ITGQAKAV- 172

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVN 224
                                     P  + Y  SK  I  + R +A     +  K  VN
Sbjct: 173 --------------------------PKHAVYSGSKGAIETFARCMAIDMADK--KITVN 204

Query: 225 CVCPGFVKTDINFHAGILSVEEG---AESPVKLALLPDGGPTGRF 266
            V PG +KTD+        +  G   +   V         P  R 
Sbjct: 205 VVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 96.3 bits (240), Expect = 7e-24
 Identities = 49/276 (17%), Positives = 81/276 (29%), Gaps = 64/276 (23%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
                V+TG+++G G     QLA   S G  ++++AR E    +  E+L A   D + ++
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VV 63

Query: 62  FHQLDISDLASVSSLADFIKTQFG----KLDIL-----TKGDAEVDWSKVCYQTYELAVE 112
               D+   A V  L   ++        +  +L     T GD  V    +          
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGD--VSKGFLNVNDLAEVNN 121

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPEKARAVLGDVENLTEE 170
               N           +   + S      +VN+SS                         
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC----------------------- 158

Query: 171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGF 230
                               +GW      Y   KA  +   ++LA   P   V    PG 
Sbjct: 159 ---------------ALQPYKGW----GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGP 199

Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +  D+   A      E ++ P   + L      G  
Sbjct: 200 LDNDMQQLAR-----ETSKDPELRSKLQKLKSDGAL 230

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 96.9 bits (242), Expect = 7e-24
 Identities = 63/295 (21%), Positives = 103/295 (34%), Gaps = 75/295 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  V+TG+N G+G  T R+LA +G TV++  RD ++G  A   +         +   +LD
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ------VEVRELD 70

Query: 67  ISDLASVSSLADFIKTQFGKLDILTK--GDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           + DL+SV   AD         D+L    G   V ++      +E     + TN+ G    
Sbjct: 71  LQDLSSVRRFAD----GVSGADVLINNAGIMAVPYALTV-DGFES---QIGTNHLG---- 118

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
             AL  LL    + R+V +SS       +         ++E+L         + Y     
Sbjct: 119 HFALTNLLLPRLTDRVVTVSSMAHWPGRI---------NLEDLNWRS-----RRY----- 159

Query: 185 EGEIANRGWCPHSSAYKVSK-AVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFHA 239
                   W     AY  SK A +  +T  L +R              PG+  T++   +
Sbjct: 160 ------SPW----LAYSQSKLANL-LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS 208

Query: 240 G---------------ILSVEEGAESPVKLALLPDG-----GPTGRFFLRKEEAP 274
           G                   + GA   +  A          GP   +  R +   
Sbjct: 209 GRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVG 263

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 97.1 bits (242), Expect = 9e-24
 Identities = 50/254 (19%), Positives = 83/254 (32%), Gaps = 73/254 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + +   + A VTG   G+G   VRQL ++G  V +    +    +A+  L+A G  PE +
Sbjct: 3   LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE-V 61

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV----DWSKVCYQTYEL 109
           +  QLD++        AD ++ +FG + IL            E     DW  +      L
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWL------L 115

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSP------RLVNLSSYVSALKDLPEKARAVLGD 163
            V     N +G        +P +             +VN +S                  
Sbjct: 116 GV-----NLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS------------------ 152

Query: 164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 222
                                   +A          Y  +K  +   +  L     K+  
Sbjct: 153 ------------------------MAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188

Query: 223 -VNCVCPGFVKTDI 235
            V+ +CPG VK+ I
Sbjct: 189 GVSVLCPGLVKSYI 202

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 96.1 bits (240), Expect = 9e-24
 Identities = 57/252 (22%), Positives = 86/252 (34%), Gaps = 76/252 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           T K A+VTG+++GIG     +LAS G TVV+  A       E   K++A+G         
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA--- 82

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYELAVE 112
           Q D+SD A+V  L    +  FG +D+L                +  + +V          
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRV---------- 132

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +  N  GT  T       L      R++N+S+                           
Sbjct: 133 -IAVNLKGTFNTLREAAQRLR--VGGRIINMSTSQ------------------------- 164

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVNCVCP 228
                          + +    P    Y  +KA + A T +L+K    R     VN V P
Sbjct: 165 -------------VGLLH----PSYGIYAAAKAGVEAMTHVLSKELRGR--DITVNAVAP 205

Query: 229 GFVKTDINFHAG 240
           G   TD+     
Sbjct: 206 GPTATDLFLEGK 217

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 96.1 bits (240), Expect = 9e-24
 Identities = 57/273 (20%), Positives = 85/273 (31%), Gaps = 75/273 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  GIG    R+LA +G  V+    D      A  K+             ++D
Sbjct: 30  KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGA------AACRVD 83

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           +SD   + ++ D     FG +D L         A +      D+ +V      +A+  L+
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRV------IAI-NLR 136

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
             +  TK       P +       +VNLSS                              
Sbjct: 137 GAWLCTK----HAAPRMIERGGGAIVNLSSLA---------------------------- 164

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                     G++A  G      AY +SKA I   +RI A          N + P FV T
Sbjct: 165 ----------GQVAVGGT----GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDT 210

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            +                   A        GR 
Sbjct: 211 PM---QQTAMAMFDGALGAGGARSMIARLQGRM 240

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 96.1 bits (240), Expect = 9e-24
 Identities = 61/275 (22%), Positives = 86/275 (31%), Gaps = 83/275 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG ET R LA  G  VVL    E     A   +          + H +D
Sbjct: 12  KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGA------VHHVVD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV------DWSKVCYQTYELAVEC 113
           +++  SV +L DF    FG+LDI+          D  V       W           V  
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT------FTV-N 118

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
            +      K      IP L  +    +VN+SS                            
Sbjct: 119 ARGTMLMCK----YAIPRLISAGGGAIVNISSAT-------------------------- 148

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                          A       S+AY  +KA I   TR +A +Y +     N + PG V
Sbjct: 149 ------------AHAAYDM----STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLV 192

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +T            E       + +       GR 
Sbjct: 193 RTPRL---------EVGLPQPIVDIFATHHLAGRI 218

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 51/250 (20%), Positives = 81/250 (32%), Gaps = 71/250 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           +   T +  VV G+ + IG     + A +G  VVLT     +    AV +++  G     
Sbjct: 3   LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA 62

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDA-----EVDWSKVCYQTY 107
           +   + D+++ A V +       +FG++  L                 E  W +V     
Sbjct: 63  I---KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV----- 114

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                 L  N      T +  +P   ++    +V  SS                      
Sbjct: 115 ------LDVNLTSLFLTAKTALPK--MAKGGAIVTFSSQA-------------------- 146

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCV 226
                                   G  P + AY  SK  +  +TR LAK   PK  VN V
Sbjct: 147 ---------------------GRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAV 185

Query: 227 CPGFVKTDIN 236
           CPG + T  +
Sbjct: 186 CPGMISTTFH 195

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 71/241 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTGS  GIG      L ++G  V++  R E+   E +++++A   D   L     D
Sbjct: 11  KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI-LQPVVAD 69

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           +        + +    ++ K+DIL          E       DW K+            +
Sbjct: 70  LGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKL-----------FE 114

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N     +   + +  +      R++ ++S  +A+    E A                  
Sbjct: 115 VNIMSGVRLTRSYLKKMIERKEGRVIFIAS-EAAIMPSQEMA------------------ 155

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                                   Y  +K +  + +R LA+        VN + PG   T
Sbjct: 156 -----------------------HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLT 192

Query: 234 D 234
           +
Sbjct: 193 E 193

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 53/248 (21%), Positives = 79/248 (31%), Gaps = 70/248 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  +VTG N+GIG    R +A+ G  V +  R     +E  EK+ K  GV       +Q 
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK---TKAYQC 71

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYELAVECL 114
           D+S+   V+     I    G +  L      +           D++ V            
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFV-----------Y 120

Query: 115 KTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
             N +G   TC A+    L+      +V  SS                            
Sbjct: 121 DVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS---------------------------- 152

Query: 174 MVVKDYFKDYEEGEIANRGWC---PHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCP 228
           M            +I N+           Y  SKA  +   + LA  +      VN + P
Sbjct: 153 MS----------SQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSP 202

Query: 229 GFVKTDIN 236
           G+V TD  
Sbjct: 203 GYVNTDQT 210

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 95.3 bits (238), Expect = 1e-23
 Identities = 53/274 (19%), Positives = 93/274 (33%), Gaps = 72/274 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTGS  GIG    + LA  G  +VL    +     A+ ++   GV     + H  D
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKA---VHHPAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           +SD+A + +L    + +FG +DIL      +  A V       W K+           + 
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKI-----------IA 108

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N           +P +   +  R++N++S                              
Sbjct: 109 LNLSAVFHGTRLALPGMRARNWGRIINIASVH---------------------------- 140

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKT 233
                     G + +       +AY  +K  +   T+++           N +CPG+V T
Sbjct: 141 ----------GLVGS----TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLT 186

Query: 234 D-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
             +       +   G     +  LL +  P+  F
Sbjct: 187 PLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF 220

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 95.3 bits (238), Expect = 1e-23
 Identities = 41/244 (16%), Positives = 71/244 (29%), Gaps = 72/244 (29%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG     +L   G  V +   ++        ++  +G      +  ++
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKV 58

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           D+SD   V +  +  +   G  D++                      KV           
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKV----------- 106

Query: 114 LKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
              N  G     +A +    +     +++N  S                           
Sbjct: 107 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQA------------------------- 141

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                        G + N       + Y  SK  +   T+  A+        VN  CPG 
Sbjct: 142 -------------GHVGNPEL----AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGI 184

Query: 231 VKTD 234
           VKT 
Sbjct: 185 VKTP 188

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 77/256 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
                +VTG ++GIG    R  A +G  V +  A + +     V  +  SG +   +   
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI--- 81

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKVCYQTYELAV 111
             D+ + A ++++   +  QFG+LD L            V         ++         
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERM--------- 132

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSP---RLVNLSSYVSALKDLPEKARAVLGDVENLT 168
             L+ N  G+       +  +    S     +VN+SS  + L                  
Sbjct: 133 --LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------------------ 172

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVN 224
                                  G       Y  SKA I+ +T  LA+          VN
Sbjct: 173 -----------------------GSATQYVDYAASKAAIDTFTIGLAREVAAE--GIRVN 207

Query: 225 CVCPGFVKTDINFHAG 240
            V PG ++TD++   G
Sbjct: 208 AVRPGIIETDLHASGG 223

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 59/277 (21%), Positives = 90/277 (32%), Gaps = 81/277 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG ++GIG    + L   G  V + ARD +   +   +L A G           D
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD----CQAIPAD 85

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTYELAVECLK 115
           +S  A    LA  +     +LDIL      + G          W KV           ++
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKV-----------MQ 134

Query: 116 TNYYGTKQTCEALIPLLELSDSP----RLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
            N        + L+PLL  S S     R++N+ S                          
Sbjct: 135 LNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVA------------------------ 170

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                         G  A         AY  SKA ++  +R+LAK        VN + PG
Sbjct: 171 --------------GISAMGEQAY---AYGPSKAALHQLSRMLAKELVGEHINVNVIAPG 213

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
              + +     I +  +  E+           P GR+
Sbjct: 214 RFPSRMT--RHIANDPQALEA------DSASIPMGRW 242

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 56/279 (20%), Positives = 84/279 (30%), Gaps = 78/279 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+ TG+ +GIG     +L  +G +VV+      K   E V +LK  G     +   Q 
Sbjct: 22  KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI---QA 78

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYELAVECL 114
           DIS  + V +L D   + FG LD +                +  + KV            
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKV-----------F 127

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N  G     +  +         R++  SS                             
Sbjct: 128 NLNTRGQFFVAQQGLKHCR--RGGRIILTSSIA--------------------------- 158

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVNCVCPGF 230
                         A     P+ + Y  SKA +  + R  A     +     VNC+ PG 
Sbjct: 159 --------------AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK--GVTVNCIAPGG 202

Query: 231 VKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRF 266
           VKTD+             +G         L +  P  R 
Sbjct: 203 VKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI 241

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 72/242 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG  +G+G E  RQ  + G  VVL    ++ G     +L  +        +  LD
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA------RYQHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           ++       +  + + +FG +D L           +       + KV      + +  L 
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKV------VEIN-LT 112

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
             + G K     +IP ++ +    +VN+SS                              
Sbjct: 113 GVFIGMK----TVIPAMKDAGGGSIVNISSAA---------------------------- 140

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                     G +        +S+Y  SK  +   +++ A         VN V PG   T
Sbjct: 141 ----------GLMGL----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186

Query: 234 DI 235
            +
Sbjct: 187 PM 188

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 41/241 (17%), Positives = 71/241 (29%), Gaps = 70/241 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +   +  GIG +T R+L  + +   +     +    A+ +LKA       + FH  D
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVN-ITFHTYD 63

Query: 67  IS-DLASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
           ++  +A    L   I  Q   +DIL           +    +            +  N+ 
Sbjct: 64  VTVPVAESKKLLKKIFDQLKTVDILINGAGILD---DHQIERT-----------IAINFT 109

Query: 120 GTKQTCEALIPLLELSDSPR---LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           G   T  A++   +         + N+ S                               
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVT----------------------------- 140

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                    G  A          Y  SKA + ++T  LAK  P        + PG  +T 
Sbjct: 141 ---------GFNAI----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187

Query: 235 I 235
           +
Sbjct: 188 L 188

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 95.3 bits (238), Expect = 2e-23
 Identities = 49/276 (17%), Positives = 92/276 (33%), Gaps = 80/276 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + G+G     + A +G  VV+T R +++  EA  +++        +L  Q+D
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ---ILTVQMD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           + +   +  + + I  +FG++DIL                    W+ V           +
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSV-----------I 111

Query: 115 KTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
                GT    +A+    +E      ++N+ +                            
Sbjct: 112 NIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATY-------------------------- 145

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKF--CVNCVCPGF 230
                          A  G   HS+A   +KA + A T+ LA  +  K+   VN + PG 
Sbjct: 146 ------------AWDAGPGV-IHSAA---AKAGVLAMTKTLAVEWGRKYGIRVNAIAPGP 189

Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           ++            ++   S           P GR 
Sbjct: 190 IERTGGA-------DKLWISEEMAKRTIQSVPLGRL 218

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 95.3 bits (238), Expect = 2e-23
 Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 72/242 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+V+G  +G+G   VR + ++G  VV     ++ G     +L  +        +  LD
Sbjct: 8   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA------RYVHLD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           ++  A   +  D   T FG L +L           +      +W ++      L V  L 
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI------LDV-NLT 114

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
             + G +    A++  ++ +    ++N+SS              + G             
Sbjct: 115 GVFLGIR----AVVKPMKEAGRGSIINISSIE-----------GLAGT------------ 147

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                                   Y  +K  +   T+  A         VN + PG VKT
Sbjct: 148 -------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKT 188

Query: 234 DI 235
            +
Sbjct: 189 PM 190

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 94.9 bits (237), Expect = 3e-23
 Identities = 53/254 (20%), Positives = 81/254 (31%), Gaps = 74/254 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                   A+VTG+  GIG     +LA +G TV     D     E V  L   G      
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 61  ----LFHQLDISDLASVSSLADFIKTQFGK-LDIL------TKGDA------EVDWSKVC 103
                  Q D+S+  +   L + ++  F +   ++      T+ D       E DW KV 
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKV- 119

Query: 104 YQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 162
                     +  N  GT    +A    L+       ++N+SS V               
Sbjct: 120 ----------IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIV--------------- 154

Query: 163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 221
                                  G++ N G     + Y  SKA +   T+  A+   +  
Sbjct: 155 -----------------------GKVGNVG----QTNYAASKAGVIGLTQTAARELGRHG 187

Query: 222 -CVNCVCPGFVKTD 234
              N V PGF+ T 
Sbjct: 188 IRCNSVLPGFIATP 201

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 94.5 bits (236), Expect = 3e-23
 Identities = 45/287 (15%), Positives = 85/287 (29%), Gaps = 93/287 (32%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT---ARDEKRGLEAVEKLKASGVDP 57
             +   K  V+ G  K +G  T +  A + + +VL    A+D     +  ++L+  G   
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV 65

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDIL--------------TKGDAEVDWSKVC 103
            L    Q D+S+   V+ L DF + +FGK+DI               T    E ++  + 
Sbjct: 66  ALY---QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETS---EAEFDAM- 118

Query: 104 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 163
                        N        +     +    +  ++ +++ +                
Sbjct: 119 ----------DTINNKVAYFFIKQAAKHMN--PNGHIITIATSL---------------- 150

Query: 164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYP 219
                                             S Y  +KA +  YTR  +K    +  
Sbjct: 151 ----------------------LAAYT----GFYSTYAGNKAPVEHYTRAASKELMKQ-- 182

Query: 220 KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +  VN + PG + T   +         G E+    A         + 
Sbjct: 183 QISVNAIAPGPMDTSFFY---------GQETKESTAFHKSQAMGNQL 220

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 94.9 bits (237), Expect = 3e-23
 Identities = 44/273 (16%), Positives = 86/273 (31%), Gaps = 76/273 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG   GIG  T    A  G  VV+   +E   +    ++ +           ++D
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA------FGVRVD 81

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVECLK 115
           +S      S+ +    ++G++D+L           V       W ++      ++V  +K
Sbjct: 82  VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRI------MSV-NVK 134

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
             +  +K     +IP++  +    ++N +S  +A                          
Sbjct: 135 GIFLCSK----YVIPVMRRNGGGSIINTTS-YTAT------------------------- 164

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                                 +AY  SK  I++ TR +A  + K    VN V PG + +
Sbjct: 165 ---------------SAI-ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDS 208

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                       E  +     +         R 
Sbjct: 209 PYFTKI----FAEAKDPAKLRSDFNARAVMDRM 237

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 58/284 (20%), Positives = 86/284 (30%), Gaps = 77/284 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
                 K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   
Sbjct: 13  PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA 72

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYE 108
           +   + DI  +  +  L D     FG LDI                 E ++ +V      
Sbjct: 73  I---KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV------ 123

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                   N  G           L   +  R+V  SS  S                    
Sbjct: 124 -----FSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNTS-------------------- 156

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVN 224
                             + +     P  S Y  SK  ++++ RI +K    +  K  VN
Sbjct: 157 -----------------KDFSV----PKHSLYSGSKGAVDSFVRIFSKDCGDK--KITVN 193

Query: 225 CVCPGFVKTDINFHAGILSVEEGAE--SPVKLALLPDGGPTGRF 266
            V PG   TD+        +  G    +  +  +     P  R 
Sbjct: 194 AVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRN 237

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 54/279 (19%), Positives = 85/279 (30%), Gaps = 83/279 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K A+VTG+  GIG   V  L + G  V +  R                      
Sbjct: 23  MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-------------- 68

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYEL 109
           L    D+ + A    L   +    G+LDI+       ++G      + DWS         
Sbjct: 69  LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS------- 121

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
               L  N     + C A IPL+  +    +VN++S                        
Sbjct: 122 ----LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCW---------------------- 155

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVC 227
                           G     G     + Y ++KA + + T+ +   +      +N VC
Sbjct: 156 ----------------GLRPGPGH----ALYCLTKAALASLTQCMGMDHAPQGIRINAVC 195

Query: 228 PGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           P  V T +         + G +    +A L    P GR 
Sbjct: 196 PNEVNTPML---RTGFAKRGFDPDRAVAELGRTVPLGRI 231

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 94.2 bits (235), Expect = 3e-23
 Identities = 31/274 (11%), Positives = 71/274 (25%), Gaps = 78/274 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VT      G  +  +L+  G TV       K   + +E    +          QL 
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-QKDELEAFAETYP--------QLK 52

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
                  + L + + + +G++D+L                   D+              +
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA-----------V 101

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           +           A+   ++   S  ++ ++S                             
Sbjct: 102 EALQIRPFALVNAVASQMKKRKSGHIIFITSAT--------------------------- 134

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                           +      S Y  ++A        L+K   ++   V  + P ++ 
Sbjct: 135 -----------PFGPWKE----LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 179

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           ++ +        E    +P  +A +       R 
Sbjct: 180 SEDS--PYFYPTEPWKTNPEHVAHVKKVTALQRL 211

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 94.5 bits (236), Expect = 4e-23
 Identities = 49/246 (19%), Positives = 78/246 (31%), Gaps = 75/246 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A VTG ++GIG    ++LA +G  V LT     +R    V +++ +G     +   + 
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI---RA 88

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYELAVECL 114
           D  D  ++           G LDIL                  D+ +V           +
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEV-----------M 137

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N+        +      L D  R++ + S ++                          
Sbjct: 138 AVNFRAPFVAIRSASRH--LGDGGRIITIGSNLA-------------------------- 169

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFCVNCVCPGF 230
                        +      P  S Y  SKA +   T+ LA+    R     VN V PG 
Sbjct: 170 -----------ELVPW----PGISLYSASKAALAGLTKGLARDLGPR--GITVNIVHPGS 212

Query: 231 VKTDIN 236
             TD+N
Sbjct: 213 TDTDMN 218

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 93.7 bits (234), Expect = 4e-23
 Identities = 35/277 (12%), Positives = 62/277 (22%), Gaps = 85/277 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
             A+VT +    G   V  L   G TVV          E      +  G           
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT---------- 51

Query: 66  DISDLASVSSLADFIKTQFGKLDIL--------------TKGDAEVDWSKVCYQTYELAV 111
                     L D        +D +               +G +E D  ++         
Sbjct: 52  IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQM--------- 102

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
              +          ++ I  L  +    ++ ++S V                        
Sbjct: 103 --FEALSIFPILLLQSAIAPLRAAGGASVIFITSSV------------------------ 136

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                         G+         +  Y  ++A   A     AK   +    +  + P 
Sbjct: 137 --------------GKKPLAY----NPLYGPARAATVALVESAAKTLSRDGILLYAIGPN 178

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           F      F        +   +P     +    P GR 
Sbjct: 179 FFNNPTYF-----PTSDWENNPELRERVDRDVPLGRL 210

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 93.7 bits (234), Expect = 4e-23
 Identities = 53/244 (21%), Positives = 81/244 (33%), Gaps = 77/244 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  ++TG+  GIG  T+   A +G  +V    +E    EA E + A  V         
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV--------V 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
           +D++D ASV           G+LD +      T+ D         DW  V          
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELV---------- 104

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            L+ N  G+    +A    +   +   +V  +S V             LG          
Sbjct: 105 -LRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY------------LG---------- 141

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                            N G     + Y  S A +   TR LA    ++   VN + PGF
Sbjct: 142 -----------------NLG----QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGF 180

Query: 231 VKTD 234
           ++T 
Sbjct: 181 IETR 184

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 94.1 bits (235), Expect = 4e-23
 Identities = 50/278 (17%), Positives = 89/278 (32%), Gaps = 83/278 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  G G    ++ A  G  VV+  RD+        ++  +       L    D
Sbjct: 10  KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAA------LAVAAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVECL 114
           IS  A V +  +   ++FGK+DIL             +     ++ ++      + V  +
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRI------VGVN-V 116

Query: 115 KTNYYGTKQTCEALIPLLEL----SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEE 170
           +  Y  T      LIP  +          ++N++S   A                     
Sbjct: 117 RGVYLMTS----KLIPHFKENGAKGQECVILNVAS-TGAG-------------------- 151

Query: 171 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCP 228
                               R   P+ + Y  +K  + + T+ LA         V  + P
Sbjct: 152 --------------------RPR-PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNP 190

Query: 229 GFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
              +T       +L+   G +S        D  P GR 
Sbjct: 191 VAGETP------LLTTFMGEDSEEIRKKFRDSIPMGRL 222

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 94.2 bits (235), Expect = 6e-23
 Identities = 54/248 (21%), Positives = 89/248 (35%), Gaps = 71/248 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +    
Sbjct: 39  YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY 98

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
                D+S    +S + + I T+   +DIL      T+ D         +W  V      
Sbjct: 99  ---AGDVSKKEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDV------ 148

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L+TN        + +   +  +   R++N+SS V                     
Sbjct: 149 -----LRTNLNSLFYITQPISKRMINNRYGRIINISSIV--------------------- 182

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G   N G     + Y  SKA +  +T+ LAK        VN +
Sbjct: 183 -----------------GLTGNVG----QANYSSSKAGVIGFTKSLAKELASRNITVNAI 221

Query: 227 CPGFVKTD 234
            PGF+ +D
Sbjct: 222 APGFISSD 229

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 45/270 (16%), Positives = 80/270 (29%), Gaps = 81/270 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG+  GIG  T  + A     +VL   ++    E   K K  G     +    +D
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVD 88

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAVEC 113
            S+   + S A  +K + G + IL                D +++ +             
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT------------- 135

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
            + N      T +A +P +  ++   +V ++S                            
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA-------------------------- 169

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL-----AKRYPKFCVNCVCP 228
                       G ++     P   AY  SK     + + L     A +       C+CP
Sbjct: 170 ------------GHVSV----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP 213

Query: 229 GFVKTDI-----NFHAGILSVEEGAESPVK 253
            FV T             L  EE     + 
Sbjct: 214 NFVNTGFIKNPSTSLGPTLEPEEVVNRLMH 243

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 93.4 bits (233), Expect = 7e-23
 Identities = 56/273 (20%), Positives = 83/273 (30%), Gaps = 72/273 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L       +  LF Q D
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           ++D   +      +   FG+LDIL           E +W K       L +  L +   G
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNN---EKNWEKT------LQI-NLVSVISG 116

Query: 121 TKQTCEALIPLLELSDSPRL---VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
           T       +  +   +       +N+SS                                
Sbjct: 117 TY----LGLDYMSKQNGGEGGIIINMSSLA------------------------------ 142

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR--ILAKRYPKF--CVNCVCPGFVKT 233
                   G +           Y  SK  I  +TR   LA         +N +CPGFV T
Sbjct: 143 --------GLMPVAQ----QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 190

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            I     I   E   +       + D       
Sbjct: 191 AIL--ESIEKEENMGQYIEYKDHIKDMIKYYGI 221

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 50/249 (20%), Positives = 80/249 (32%), Gaps = 77/249 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  +VTG+  GIG   +   A +G ++V   R+E+   EAV  L+A        
Sbjct: 1   MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA------ 54

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
           +    D+SD  +V ++      +FG+L  +          A         W KV      
Sbjct: 55  IAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKV------ 107

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L+ N  G+         +LE  +   LV   S              V G      
Sbjct: 108 -----LRVNLTGSFLVARKAGEVLE--EGGSLVLTGS--------------VAG------ 140

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                              +   G     + Y   K  +    R LA    +    VN +
Sbjct: 141 -------------------LGAFG----LAHYAAGKLGVVGLARTLALELARKGVRVNVL 177

Query: 227 CPGFVKTDI 235
            PG ++T +
Sbjct: 178 LPGLIQTPM 186

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 34/270 (12%), Positives = 75/270 (27%), Gaps = 73/270 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
                 V G+   IG E  ++ A++G TV    R+ ++    V +++A+G     ++   
Sbjct: 6   RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR---IVARS 62

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVE 112
           LD  +   V++  +        L++              +      + KV          
Sbjct: 63  LDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDR-VFRKV---------- 110

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
             +   +    +      L+      ++    +  S                        
Sbjct: 111 -WEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL----------------------- 146

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK--FCVNCVCPG 229
                             RG     +A+  +K  + A  + +A+   PK     + +   
Sbjct: 147 ------------------RGG-SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDS 187

Query: 230 FVKTDINFHAGILSVEEGAESPVKLALLPD 259
            V T            + A +   L + P 
Sbjct: 188 GVDTAWVRERREQMFGKDALANPDLLMPPA 217

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 57/291 (19%), Positives = 87/291 (29%), Gaps = 84/291 (28%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPE 58
           K   ++TG+ KGIG     + A            +VL++R      +   + +A G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQT 106
                  DISD+A V  L   I  ++G +D L            +    E D+       
Sbjct: 60  -TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEE-DFDYT---- 113

Query: 107 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 166
                  + TN  GT    +AL  L+E   S  +  ++S                     
Sbjct: 114 -------MNTNLKGTFFLTQALFALMERQHSGHIFFITSVA------------------- 147

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 224
                                 A      HSS Y +SK         +     K    + 
Sbjct: 148 -------------------ATKAF----RHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 184

Query: 225 CVCPGFVKTDINFH------AGILSVEEGAESPVKLALLPDGGPTGRFFLR 269
            V PG V T +         A ++  E+ A   V+  L P         LR
Sbjct: 185 DVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILR 235

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 49/245 (20%), Positives = 80/245 (32%), Gaps = 79/245 (32%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K A+VTG+ +GIG     +LA+ G TV+++  + +    A   +  KA  +         
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI--------A 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
            DISD  SV +L   I+   G +DIL                    W K+          
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKI---------- 107

Query: 113 CLKTNYYGTKQTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
            +  N  GT     A          + R+++++S                          
Sbjct: 108 -IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNT------------------------ 142

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                                     +AY  +K  +  +TR LA    K+    N V PG
Sbjct: 143 --------------FFAGTPN----MAAYVAAKGGVIGFTRALATELGKYNITANAVTPG 184

Query: 230 FVKTD 234
            +++D
Sbjct: 185 LIESD 189

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 56/284 (19%), Positives = 92/284 (32%), Gaps = 84/284 (29%)

Query: 1   MAEATK---KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP 57
           MA  T+   K  VVTG  +GIG   VR   + G  VV+  +DE  G    ++L  +    
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA---- 56

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCY 104
              +F   D++    V +L      +FG+LD +              +  A+  + ++  
Sbjct: 57  ---VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQ-GFRQL-- 110

Query: 105 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 164
               L +  L   Y  TK      +P L  S    ++N+SS +                 
Sbjct: 111 ----LEL-NLLGTYTLTK----LALPYLRKS-QGNVINISS-LVGA-------------- 145

Query: 165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC-- 222
                                      G    +  Y  +K  + A T+ LA     +   
Sbjct: 146 --------------------------IGQ-AQAVPYVATKGAVTAMTKALALDESPYGVR 178

Query: 223 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           VNC+ PG + T +             +    +       P GR 
Sbjct: 179 VNCISPGNIWTPLWEEL----AALMPDPRASIREGMLAQPLGRM 218

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 92.2 bits (230), Expect = 2e-22
 Identities = 56/284 (19%), Positives = 96/284 (33%), Gaps = 90/284 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG    ++LA+ G  V +     ++   E V +++++G     +   
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI--- 62

Query: 64  QLDISDLASVSSLADFIKTQF------GKLDIL-----TKGDA------EVDWSKVCYQT 106
             ++  L  V +L   +  +        K DIL         A      E  + ++    
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM---- 118

Query: 107 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 166
                  +  N        +  +  L   D+ R++N+SS                     
Sbjct: 119 -------VSVNAKAPFFIIQQALSRLR--DNSRIINISSAA------------------- 150

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RYPKFC 222
                                I+     P   AY ++K  IN  T  LAK    R     
Sbjct: 151 -------------------TRISL----PDFIAYSMTKGAINTMTFTLAKQLGAR--GIT 185

Query: 223 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           VN + PGFVKTD   +A +LS     +    ++         R 
Sbjct: 186 VNAILPGFVKTD--MNAELLSDPMMKQYATTIS------AFNRL 221

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 57/277 (20%), Positives = 95/277 (34%), Gaps = 73/277 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AVVTGS  GIG      LA++G  +VL    +   +E V        GV     L+  
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKV---LYDG 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEV------DWSKVCYQTYELAVEC 113
            D+S   +V  L D    Q G++DIL      +  A +       W  +           
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAI----------- 110

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           L  N         A +P ++     R++N++S                            
Sbjct: 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAH-------------------------- 144

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                       G +A+     + SAY  +K  +  +T++ A          N +CPG+V
Sbjct: 145 ------------GLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWV 188

Query: 232 KTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +T +     + +       +      LL +  P+ +F
Sbjct: 189 RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 92.2 bits (230), Expect = 2e-22
 Identities = 56/248 (22%), Positives = 92/248 (37%), Gaps = 71/248 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                K+ A+VTG+++GIG     +LA +G  V+ TA  E          K +G++    
Sbjct: 23  DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
               L+++D  +V +L +    +FG L++L      T+ D       + +W  V      
Sbjct: 83  ---VLNVNDATAVDALVESTLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAV------ 132

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                + TN     +   A++  +  +   R+VN++S V                     
Sbjct: 133 -----IDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVV--------------------- 166

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G   N G       Y  +KA +   TR LA+        VNCV
Sbjct: 167 -----------------GSAGNPG----QVNYAAAKAGVAGMTRALAREIGSRGITVNCV 205

Query: 227 CPGFVKTD 234
            PGF+ TD
Sbjct: 206 APGFIDTD 213

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 91.0 bits (227), Expect = 5e-22
 Identities = 50/283 (17%), Positives = 85/283 (30%), Gaps = 78/283 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
           M     K A++TGS +GIG         +G TV +   D +R  +A  ++   A  V   
Sbjct: 3   MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAV--- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGD-----AEVDWSKVCYQTY 107
                Q+D++   S+ +         G LDIL                   + K+     
Sbjct: 60  -----QMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKL----- 109

Query: 108 ELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 166
                    N  GT  T +A    ++      +++N++S                     
Sbjct: 110 ------FAINVAGTLFTLQAAARQMIAQGRGGKIINMASQA------------------- 144

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 224
                              G           + Y  +KA + + T+       K    VN
Sbjct: 145 -------------------GRRGEAL----VAIYCATKAAVISLTQSAGLDLIKHRINVN 181

Query: 225 CVCPGFVKTDINFH-AGILSVEEGAESPVKLALLPDGGPTGRF 266
            + PG V  +       + +  E      K  L+ +  P GR 
Sbjct: 182 AIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRM 224

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 90.7 bits (226), Expect = 7e-22
 Identities = 49/278 (17%), Positives = 82/278 (29%), Gaps = 75/278 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT--ARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+VTG  +GIG     +LA+ G  + +    + E++  E ++ ++A+       +F  
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---AVFVG 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
           LD++D A+  S  D    + G  D+L       +         E D  ++          
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQI---------- 108

Query: 113 CLKTNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
               N +        A     EL    +++N +S                          
Sbjct: 109 -YSVNVFSVFFGIQAASRKFDELGVKGKIINAASIA------------------------ 143

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPG 229
                                     SAY  +K  +   T+  A+        VN   PG
Sbjct: 144 --------------AIQGFPI----LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPG 185

Query: 230 FVKTDINFH-AGILSVEEGAESPVKLALLPDGGPTGRF 266
            V T +       LS   G                GR 
Sbjct: 186 IVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRP 223

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 90.8 bits (226), Expect = 7e-22
 Identities = 41/238 (17%), Positives = 72/238 (30%), Gaps = 56/238 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  VVTG+++GIG     QL   G TV +T R         ++ ++ G      +    D
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQC---VPVVCD 62

Query: 67  ISDLASVSSLADFI-KTQFGKLDIL------TKGDAEVDWSKVCY-QTYELAVECLKTNY 118
            S  + V SL + + + Q G+LD+L               +K  +     +  +      
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
            G          L+  +    +V +SS  S                              
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSPGS------------------------------ 152

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
                    +        +  Y V KA  +      A    +       + PG V+T+
Sbjct: 153 ---------LQYMF----NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTE 197

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 90.4 bits (225), Expect = 8e-22
 Identities = 30/249 (12%), Positives = 55/249 (22%), Gaps = 88/249 (35%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  +V G +  +G E V+   SK    +     E               +P       
Sbjct: 21  MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE---------------NPNADHSFT 65

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAV 111
           +  S    + S+ + I ++  K+D               +    +     +         
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLK-SVKGM--------- 115

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             +  N Y    +      LL        V   +             A+           
Sbjct: 116 --IDMNLYSAFASAHIGAKLLN--QGGLFVLTGASA-----------ALNRT-------- 152

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC----VNCVC 227
                                      AY  +KA  +   + LA              + 
Sbjct: 153 -----------------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGIL 189

Query: 228 PGFVKTDIN 236
           P  + T  N
Sbjct: 190 PVTLDTPTN 198

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 92.2 bits (229), Expect = 8e-22
 Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 58/277 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
               +TG+++GIG     + A  G  +V+ A+  +           A E+++A G     
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA-- 103

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYY 119
            L   +D+ D   +S+  +    +FG +DIL    + +  +       +     +  N  
Sbjct: 104 -LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
           GT    +A IP L+ S    ++N+S                L                  
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISP--------------PLNLNPV------------- 195

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPG-FVKTDINF 237
                        W     AY ++K  ++ Y   +A+ +  +  VN + P   + T    
Sbjct: 196 -------------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD 242

Query: 238 HAGILSVEEGAESP------VKLALLPDGGPTGRFFL 268
             G   +E                       TG F +
Sbjct: 243 MLGGPGIESQCRKVDIIADAAYSIFQKPKSFTGNFVI 279

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 90.7 bits (226), Expect = 8e-22
 Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 72/247 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFH 63
             ++A++T   KG+G +   +L +KG +V +T   D        E  K        L F 
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER---LQFV 62

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL--------TKGDA------EVDWSKVCYQTYEL 109
           Q D++    +  + +   + FGK+D L         +         E +W+++       
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFE-RKKLVDYEEDEWNEM------- 114

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
               ++ N        + ++P++   +  R++N                           
Sbjct: 115 ----IQGNLTAVFHLLKLVVPVMRKQNFGRIINYGF-QG--------------------- 148

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVC 227
                                     + SA+  +K  + + T+ +A    ++    N VC
Sbjct: 149 -----AD---------SAPGW----IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVC 190

Query: 228 PGFVKTD 234
           PG +  +
Sbjct: 191 PGDIIGE 197

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 90.2 bits (225), Expect = 9e-22
 Identities = 59/244 (24%), Positives = 91/244 (37%), Gaps = 71/244 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            +K A+VTG+++GIGFE    LASKG TVV TA  +    +    +K  G     L    
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL---V 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
           L+ISD+ S+ +    IK +   +DIL      T+ D       E +W  V          
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGITR-DNLMMRMSEDEWQSV---------- 109

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            + TN     +  +  +  +      R++++ S V                         
Sbjct: 110 -INTNLSSIFRMSKECVRGMMKKRWGRIISIGSVV------------------------- 143

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGF 230
                        G   N G     + Y  +KA +  +++ LA         VN V PGF
Sbjct: 144 -------------GSAGNPG----QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGF 186

Query: 231 VKTD 234
           + TD
Sbjct: 187 IATD 190

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 89.9 bits (224), Expect = 1e-21
 Identities = 53/274 (19%), Positives = 77/274 (28%), Gaps = 83/274 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              +VTG +KGIG   V  L       V+    ++                E L F + D
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA------------ENLKFIKAD 52

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           ++    ++++ D IK      D +        KG           KV           L 
Sbjct: 53  LTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKV-----------LD 99

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N + +    + L   L+      +V   S                              
Sbjct: 100 LNVWSSIYFIKGLENNLK--VGASIVFNGSDQ---------------------------- 129

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                       IA     P+S AY +SK  I   T+ LA    K+   VN VCPG V T
Sbjct: 130 ----------CFIAK----PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDT 175

Query: 234 DIN-FHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           D+        +   G              P  R 
Sbjct: 176 DLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI 209

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 72/245 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFH 63
             K A+VTGS++G+G     +L + G  +VL        L+A  +  KA+G++  +    
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA--- 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAV 111
           + D+ +   V ++       FG++DIL      T+ D       E DW  V         
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITR-DTLMLKMSEKDWDDV--------- 110

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             L TN        +A+  ++    S +++N++S                          
Sbjct: 111 --LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIA------------------------ 144

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
                         G I N G     + Y  SKA +  +T+ +AK +       N V PG
Sbjct: 145 --------------GIIGNAG----QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPG 186

Query: 230 FVKTD 234
            +KTD
Sbjct: 187 IIKTD 191

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 89.1 bits (222), Expect = 2e-21
 Identities = 49/273 (17%), Positives = 85/273 (31%), Gaps = 81/273 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++T + +GIG       A +G  V+ T  +E +  E  +                LD
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ--------TRVLD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           ++    +   A+    +  +LD+L         G      E DW         + +  ++
Sbjct: 59  VTKKKQIDQFAN----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFS------MNLN-VR 107

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
           + Y   K    A +P +    S  ++N+SS  S++K                        
Sbjct: 108 SMYLMIK----AFLPKMLAQKSGNIINMSSVASSVK------------------------ 139

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                             C     Y  +KA +   T+ +A  + +     NCVCPG V T
Sbjct: 140 -------------GVVNRC----VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDT 182

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                     ++                 TGRF
Sbjct: 183 PSLQER----IQARGNPEEARNDFLKRQKTGRF 211

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 89.1 bits (222), Expect = 2e-21
 Identities = 56/273 (20%), Positives = 88/273 (32%), Gaps = 78/273 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A VTG+  GIG E  R  A+ G  ++L  R+      A ++L A+            D
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVA-----ARIVAD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           ++D  ++++ A   +     + IL          DA    +  W +V           + 
Sbjct: 67  VTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQV-----------MA 114

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N  G      A    +    +  +VNL S                              
Sbjct: 115 VNVDGMFWASRAFGRAMVARGAGAIVNLGSMS---------------------------- 146

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                     G I NR     +S+Y  SK  ++  TR LA  +      VN + PG+V T
Sbjct: 147 ----------GTIVNRPQ--FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVAT 194

Query: 234 DINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           ++          +  E P       D  P GR 
Sbjct: 195 EMT--------LKMRERPELFETWLDMTPMGRC 219

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 88.8 bits (221), Expect = 5e-21
 Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 72/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
               T + A+VTG+++GIG     +LA+ G  V +  A       E V  + A+G +   
Sbjct: 23  ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFA 82

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTY 107
           +   + D+S  + V +L   +  ++G+LD+L      T+ D         DW  V     
Sbjct: 83  V---KADVSQESEVEALFAAVIERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSV----- 133

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                 L  N  G      A   ++    S R++N++S V                    
Sbjct: 134 ------LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVV-------------------- 167

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNC 225
                             GE+ N G     + Y  +KA +   T+ +AK        VN 
Sbjct: 168 ------------------GEMGNPG----QANYSAAKAGVIGLTKTVAKELASRGITVNA 205

Query: 226 VCPGFVKTD 234
           V PGF+ TD
Sbjct: 206 VAPGFIATD 214

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 88.4 bits (220), Expect = 6e-21
 Identities = 52/246 (21%), Positives = 83/246 (33%), Gaps = 70/246 (28%)

Query: 7   KYAVVTGS--NKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKL-KASGVDPELLLF 62
           K  VVTG+   KG+G E  R  A  G  V +T A   +   E V++L K  G+       
Sbjct: 21  KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK---AKA 77

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA-----EVDWSKVCYQTYELAV 111
           ++  +    S   L   +   FG++D        T            W+ V         
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHV--------- 128

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             ++ +  GT    +A+    +   +  LV  +S                          
Sbjct: 129 --VQVDLNGTFHCAKAVGHHFKERGTGSLVITAS-------------------------- 160

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-CVNCVCPGF 230
             M           G IAN       ++Y V+KA      R LA  +  F  VN + PG+
Sbjct: 161 --MS----------GHIANFP--QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGY 206

Query: 231 VKTDIN 236
           + T ++
Sbjct: 207 IDTGLS 212

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 87.9 bits (219), Expect = 7e-21
 Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 86/274 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ KGIG  TV+ L + G  VV  +R +      V +          +    +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           + D  +            G +D+L                +  + +             +
Sbjct: 61  LGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRS-----------FE 105

Query: 116 TNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
            N     Q  + +   L+       +VN+SS                             
Sbjct: 106 VNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC--------------------------- 138

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                       + A      + S Y  +K  ++  T+++A         VN V P  V 
Sbjct: 139 -----------SQRAV----TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVM 183

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           T +         +     P K   + +  P G+F
Sbjct: 184 TSMG--------QATWSDPHKAKTMLNRIPLGKF 209

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 88.0 bits (219), Expect = 8e-21
 Identities = 45/274 (16%), Positives = 80/274 (29%), Gaps = 69/274 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVVT  + G+GF +  +LA  G  ++L +R+ ++   A  ++ +     + +     D
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIVAGD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TK-GDA----EVDWSKVCYQTYELAVECLK 115
           I +   +  L +  +   G  DIL       + G        DW +             +
Sbjct: 67  IREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDES-----------YR 114

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
                           +      R+V + S V+ L+   + A                  
Sbjct: 115 LLARSAVWVGRRAAEQMVEKGWGRMVYIGS-VTLLRPWQDLA------------------ 155

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                                     + +  +    R LA         VN V P  + T
Sbjct: 156 -----------------------LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILT 192

Query: 234 D-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           D +   A   +   G      L  +    P GR 
Sbjct: 193 DRVRSLAEERARRSGITVEEALKSMASRIPMGRV 226

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 87.2 bits (217), Expect = 1e-20
 Identities = 51/275 (18%), Positives = 92/275 (33%), Gaps = 80/275 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G E V+ L  +G  V  +  +E  G +   +L          +F + D
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS------MFVRHD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDAEV----DWSKVCYQTYELAVECLK 115
           +S  A  + +   ++ + G L++L         GD E     D+S++      L +   +
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRL------LKIN-TE 113

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
           + + G +      I  +       ++N++S VS+                          
Sbjct: 114 SVFIGCQ----QGIAAM-KETGGSIINMAS-VSSW------------------------- 142

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC----VNCVCPGFV 231
                                 + Y  SKA ++A TR  A    K      VN + P  +
Sbjct: 143 ---------------LPI-EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI 186

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
            T +     + +      S   +   P     GR 
Sbjct: 187 YTPM-----MQASLPKGVSKEMVLHDPKLNRAGRA 216

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 87.1 bits (217), Expect = 1e-20
 Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 72/245 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG      LA +G  VV+  A +E++  E V+++K  G D   +   
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAV 111
           + D+++   V+++       FG++DIL      TK D       E +W  V         
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTV--------- 109

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             + TN  G     +A+   +      R+VN++S V                        
Sbjct: 110 --INTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV------------------------ 143

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
                         G   N G     + Y  +KA +   T+  AK        VN + PG
Sbjct: 144 --------------GVTGNPG----QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPG 185

Query: 230 FVKTD 234
           F+ TD
Sbjct: 186 FIATD 190

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 86.8 bits (216), Expect = 1e-20
 Identities = 43/274 (15%), Positives = 78/274 (28%), Gaps = 86/274 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+ KGIG +TV+ L + G  VV   R     +   ++          +    +D
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           + D  +            G +D+L                +  + +              
Sbjct: 61  LGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRS-----------FS 105

Query: 116 TNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
            N     Q  + +   ++       +VN+SS V                           
Sbjct: 106 VNLRSVFQVSQMVARDMINRGVPGSIVNVSSMV--------------------------- 138

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                        +      P+   Y  +K  +   T+ +A         VN V P  V 
Sbjct: 139 -----------AHVTF----PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVL 183

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           TD+         ++ +  P     L +  P  +F
Sbjct: 184 TDMG--------KKVSADPEFARKLKERHPLRKF 209

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 72/243 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQL 65
              VVTG+++GIG      L   G  V++  AR  K   E  ++++A G           
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF---GG 58

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           D+S  A V ++       +G +D++      T+ D       +  W +V           
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEV----------- 106

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           +  N  G     +A   ++      R++N++S V                          
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV-------------------------- 140

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFV 231
                       G I N G     + Y  +KA +  +++  A+        VN VCPGF+
Sbjct: 141 ------------GLIGNIG----QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFI 184

Query: 232 KTD 234
            +D
Sbjct: 185 ASD 187

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 86.4 bits (215), Expect = 2e-20
 Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 71/243 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A++TG+++GIG     +LA  G  + +   ++ ++  E  E+ +  G    L+     
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS--PLVAVLGA 59

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVEC 113
           ++ +  + ++L        G LD L      T+ D       + DW  V           
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAV----------- 107

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
           L+ N     +T    + L+  +   R+VN++S V                          
Sbjct: 108 LEANLSAVFRTTREAVKLMMKARFGRIVNITSVV-------------------------- 141

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGFV 231
                       G + N G     + Y  SKA +  +TR +AK Y +    VN V PGF+
Sbjct: 142 ------------GILGNPG----QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFI 185

Query: 232 KTD 234
           +T+
Sbjct: 186 ETE 188

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 86.4 bits (215), Expect = 2e-20
 Identities = 37/242 (15%), Positives = 60/242 (24%), Gaps = 81/242 (33%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K   VTG+ KGIG+ T       G  V    +   +                      +D
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFA-------------TEVMD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVECL 114
           ++D A V+ +   +  +  +LD L       +         + DW +             
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQT-----------F 102

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N  G     +  +          +V ++S                             
Sbjct: 103 AVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA--------------------------- 135

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                            G     SAY  SKA + +    +           N V PG   
Sbjct: 136 -----------AHTPRIGM----SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD 180

Query: 233 TD 234
           TD
Sbjct: 181 TD 182

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 86.4 bits (215), Expect = 3e-20
 Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 72/245 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG     QLA +G  V +  A  +++    VE++KA GVD   +   
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAV 111
           Q +++D   V ++   + +QFG LD+L      T+ D       E +W  V         
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDV--------- 109

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             + TN  G     +   P +    S  ++NLSS V                        
Sbjct: 110 --IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVV------------------------ 143

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
                         G + N G     + Y  +KA +   T+  A+        VN V PG
Sbjct: 144 --------------GAVGNPG----QANYVATKAGVIGLTKSAARELASRGITVNAVAPG 185

Query: 230 FVKTD 234
           F+ +D
Sbjct: 186 FIVSD 190

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 86.4 bits (215), Expect = 4e-20
 Identities = 44/270 (16%), Positives = 78/270 (28%), Gaps = 74/270 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T +     G  VV+    +  G +    + +  V    + F   D
Sbjct: 17  KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----ISFVHCD 72

Query: 67  ISDLASVSSLADFIKTQFGKLDI--------------LTKGDAEVDWSKVCYQTYELAVE 112
           ++    V +L D    + GKLDI              + +   E D+ +V      + + 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNE-DFKRV------MDIN 125

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +   +   K        ++  +    +V  +S +S+                       
Sbjct: 126 -VYGAFLVAK----HAARVMIPAKKGSIVFTAS-ISSF---------------------- 157

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                                   S  Y  +K  +   T  L     ++   VNCV P  
Sbjct: 158 ------------------TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYI 199

Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDG 260
           V + +             E     A    G
Sbjct: 200 VASPL-LTDVFGVDSSRVEELAHQAANLKG 228

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 86.2 bits (214), Expect = 6e-20
 Identities = 51/276 (18%), Positives = 88/276 (31%), Gaps = 77/276 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE--LLLFHQ 64
           + A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+A+    +   ++  Q
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
            +I +   V++L       FGK++ L          +         W  V          
Sbjct: 79  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAV---------- 127

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            L+TN  GT   C+A+           +VN+                             
Sbjct: 128 -LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-------------------------- 160

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGF 230
                         +        HS A   ++A +   T+ LA  +      +NCV PG 
Sbjct: 161 -------------TKAGFPLAV-HSGA---ARAGVYNLTKSLALEWACSGIRINCVAPGV 203

Query: 231 VKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           + +           +   E   +        P  R 
Sbjct: 204 IYSQTAVENYGSWGQSFFEGSFQKI------PAKRI 233

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 84.8 bits (211), Expect = 7e-20
 Identities = 60/249 (24%), Positives = 91/249 (36%), Gaps = 72/249 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPEL 59
             +   K ++VTGS +GIG     +LAS G TV++T    E+    A E     GV    
Sbjct: 2   EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG 61

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTY 107
           +   ++++    S++   + I      +DIL      T+ D        +DW +V     
Sbjct: 62  V---EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITR-DKLFLRMSLLDWEEV----- 112

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL 167
                 LK N  GT    +  +  +      R+VN+SS                      
Sbjct: 113 ------LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISS---------------------- 144

Query: 168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNC 225
                  VV         G   N G       Y  +KA +  +T+ LAK        VN 
Sbjct: 145 -------VV---------GFTGNVG----QVNYSTTKAGLIGFTKSLAKELAPRNVLVNA 184

Query: 226 VCPGFVKTD 234
           V PGF++TD
Sbjct: 185 VAPGFIETD 193

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 40/275 (14%), Positives = 77/275 (28%), Gaps = 78/275 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQL 65
           K A +TG   G+G      L+S G   V+ +R         E++ + +G     +   Q 
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK---VHAIQC 83

Query: 66  DISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEVDWSKVCYQTYELAVECL 114
           D+ D   V +    +    G  +I+           T+  +   W  +            
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI-----------T 132

Query: 115 KTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
                GT      +   L++       +++++                            
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY-------------------------- 166

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 231
                        E  +            +KA + A ++ LA  + K+    N + PG +
Sbjct: 167 ------------AETGS----GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI 210

Query: 232 KTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           KT   F            +      +    P GR 
Sbjct: 211 KTKGAF-------SRLDPTGTFEKEMIGRIPCGRL 238

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 84.5 bits (210), Expect = 1e-19
 Identities = 53/248 (21%), Positives = 93/248 (37%), Gaps = 74/248 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G      
Sbjct: 4   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
               L++++  S+ ++   I  +FG +DIL      T+ D       E +WS +      
Sbjct: 59  -GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDI------ 110

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                ++TN     +  +A++  +      R++N+ S V                     
Sbjct: 111 -----METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV--------------------- 144

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G + N G     + Y  +KA +  +T+ +A+        VN V
Sbjct: 145 -----------------GTMGNAG----QANYAAAKAGVIGFTKSMAREVASRGVTVNTV 183

Query: 227 CPGFVKTD 234
            PGF++TD
Sbjct: 184 APGFIETD 191

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 84.5 bits (210), Expect = 2e-19
 Identities = 52/248 (20%), Positives = 84/248 (33%), Gaps = 74/248 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T + A+VTG+  GIG    R   ++G  V L    E +  E    L          
Sbjct: 22  MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF----- 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
                ++SD  S+  LA+  + +   +DIL      T+ D       + DW  V      
Sbjct: 77  -VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDV------ 128

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                L  N          LI  +      R++N++S V                     
Sbjct: 129 -----LAVNLTAASTLTRELIHSMMRRRYGRIINITSIV--------------------- 162

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G + N G     + Y  +KA +  +++ LA+        VNC+
Sbjct: 163 -----------------GVVGNPG----QTNYCAAKAGLIGFSKALAQEIASRNITVNCI 201

Query: 227 CPGFVKTD 234
            PGF+K+ 
Sbjct: 202 APGFIKSA 209

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 52/245 (21%), Positives = 85/245 (34%), Gaps = 72/245 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           +++ A VTG   GIG    ++L   G  VV     +  R ++ +E  KA G D       
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS--- 68

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAV 111
           + ++ D  S     D +K + G++D+L      T+ D         DW  V         
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAV--------- 118

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             + TN        + +I  +      R++N+SS                          
Sbjct: 119 --IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVN------------------------ 152

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
                         G+    G     + Y  +KA I+ +T  LA+        VN V PG
Sbjct: 153 --------------GQKGQFG----QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 194

Query: 230 FVKTD 234
           ++ TD
Sbjct: 195 YIGTD 199

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 73/247 (29%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFH 63
            K AV+TG+++GIG    R LA  G  + L AR   R LE +  E ++  GV+   + +H
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE---VFYH 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAV 111
            LD+S   SV   +  +  +FG +D++             +   E ++ ++         
Sbjct: 58  HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEE-EFHEM--------- 107

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             ++ N  G  +T +A +  L+ +    LV  S                           
Sbjct: 108 --IEVNLLGVWRTLKAFLDSLKRTGGLALVTTSD-------------------------- 139

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV 231
                           ++ R   P+   Y  +K    A  R      P      + PG V
Sbjct: 140 ----------------VSARLI-PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAV 182

Query: 232 KTDINFH 238
            T     
Sbjct: 183 DTYFGGS 189

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 83.8 bits (208), Expect = 4e-19
 Identities = 49/274 (17%), Positives = 78/274 (28%), Gaps = 77/274 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A +TG   GIGF         G   V+ +R   R L A  KL  A+G      L   +
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR---CLPLSM 84

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDA-----------EVDWSKVCYQTYELAVECL 114
           D+    +V +  D    +FG++DIL    A              +  V           +
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTV-----------M 133

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             +  GT      L           +VN+++     +    +                  
Sbjct: 134 DIDTSGTFNVSRVLYEKFFRDHGGVIVNITA-TLGNRGQALQV----------------- 175

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                                H+ +   +KA ++A TR LA  +      VN + PG + 
Sbjct: 176 ---------------------HAGS---AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPIS 211

Query: 233 TDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
                                L+      P  R 
Sbjct: 212 GTEGL-------RRLGGPQASLSTKVTASPLQRL 238

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 51/245 (20%), Positives = 85/245 (34%), Gaps = 72/245 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFH 63
            K+ A VTG   G+G    R+L   G+ V ++  +    +       + +G D +     
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY--- 80

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAV 111
            +D++D  S    A+ +   FGK+D+L      T+ DA      + DW  V         
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAV--------- 130

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER 171
             ++T+        +  I  +      R+VN+ S                          
Sbjct: 131 --MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS-------------------------- 162

Query: 172 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPG 229
              V          G     G     + Y  +KA I+ +T+ LA    K    VN V PG
Sbjct: 163 ---VN---------GSRGAFG----QANYASAKAGIHGFTKTLALETAKRGITVNTVSPG 206

Query: 230 FVKTD 234
           ++ T 
Sbjct: 207 YLATA 211

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 83.0 bits (206), Expect = 5e-19
 Identities = 44/243 (18%), Positives = 75/243 (30%), Gaps = 71/243 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG+  GIG       A  G  V+   R +    E  +++   G           D
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS---AEAVVAD 87

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------TKGDA----EVDWSKVCYQTYELAVECLK 115
           ++DL   +++A+ +     ++D+L        +  A       W +V           L 
Sbjct: 88  LADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREV-----------LT 135

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N         +    +    S R+V ++S +S                           
Sbjct: 136 VNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS--------------------------- 168

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                               + +AY  SK  +   TR LA  +      VN + PG+V T
Sbjct: 169 -----------FQGG----RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVT 213

Query: 234 DIN 236
              
Sbjct: 214 ANT 216

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 43/253 (16%), Positives = 72/253 (28%), Gaps = 77/253 (30%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            ++TG+  G+G    R L   G  ++L+ R      E   ++ A  +          D++
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARAL--------PADLA 52

Query: 69  DLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           D     +L +    + G LD+L       G A V  +       +L  E L  +      
Sbjct: 53  DELEAKALLE----EAGPLDLLVHAVGKAGRASVREAGR-----DLVEEMLAAHLLTAA- 102

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
               ++         R V   +Y                                     
Sbjct: 103 ---FVLKHARFQKGARAVFFGAYP------------------------------------ 123

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAG- 240
               +      P  +AY  +K  + AY     K   +    +  V    V T +    G 
Sbjct: 124 --RYVQV----PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGG 177

Query: 241 ----ILSVEEGAE 249
                LS EE A 
Sbjct: 178 PPKGALSPEEAAR 190

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 80.4 bits (199), Expect = 4e-18
 Identities = 46/265 (17%), Positives = 68/265 (25%), Gaps = 57/265 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
               +TGS  GIG      LA  G TV+   R +      +            +L     
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D   V      +      L +                           NY+G     +
Sbjct: 62  VLDGL-VCCAGVGVTAANSGLVVA-------------------------VNYFGVSALLD 95

Query: 127 ALIPLLELSDSPRLVNLSS---YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
            L   L     P  V + S         +LP     + GD                    
Sbjct: 96  GLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI--------------- 140

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGI 241
              E+A +    H  AY  SK  +    R     +      +N V PG V+T +      
Sbjct: 141 ---ELAEQQGQTH-LAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL--QAS 194

Query: 242 LSVEEGAESPVKLALLPDGGPTGRF 266
            +     E     +      P GR 
Sbjct: 195 KADPRYGE-----STRRFVAPLGRG 214

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 80.7 bits (200), Expect = 4e-18
 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 29/154 (18%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K  ++TG++ GIG    R+L   G  ++L AR + R +EA   +++ +G      L  
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGT---ALAQ 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAV 111
            LD++D  SV++ A      +G++D+L                 + +W ++         
Sbjct: 59  VLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD-EWERM--------- 108

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
             +  N  G      A++P++E   S +++N+ S
Sbjct: 109 --IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 51/291 (17%), Positives = 92/291 (31%), Gaps = 71/291 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVEKLKASG 54
           K  +VTG  +G G     +LA +G  ++L                 +   EA  +++ +G
Sbjct: 11  KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG 70

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV---DWSKVCYQ 105
                    ++D+ D A+VS        +FGKLD++          A +    ++     
Sbjct: 71  RK---AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADA--- 124

Query: 106 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 165
                      ++ G   T  A +P   L+    ++   S V+ L               
Sbjct: 125 --------FDVDFVGVINTVHAALPY--LTSGASIITTGS-VAGL--------------- 158

Query: 166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 223
                              +   A     P  + Y  +K ++++YT  LA +        
Sbjct: 159 ---------------IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRA 203

Query: 224 NCVCPGFVKTDINFHAGILS-VEEGAESPVKLALLPDGGPTGRFFLRKEEA 273
           N + P  V TD+   A +        E+P +   L              EA
Sbjct: 204 NVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEA 254

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 46/287 (16%), Positives = 87/287 (30%), Gaps = 83/287 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-------------ARDEKRGLEAVEKLKAS 53
           + A +TG+ +G G     ++A++G  ++                       E V  ++A+
Sbjct: 12  RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA 71

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL--------TKGDAEV---DWSKV 102
                 ++   +D  D   +  + D      G+LDI+         +   ++   D+  V
Sbjct: 72  NRR---IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVL 161
                      +  N  GT  T  A  P ++E      ++ +SS  + +K          
Sbjct: 129 -----------MDINVTGTWNTVMAGAPRIIEGGRGGSIILISS-AAGMK---------- 166

Query: 162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 221
                                            P    Y  SK  +    R  A    K 
Sbjct: 167 ------------------------------MQ-PFMIHYTASKHAVTGLARAFAAELGKH 195

Query: 222 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
              VN V PG V T +     + +V +  E+  +L+ +         
Sbjct: 196 SIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 79.9 bits (198), Expect = 7e-18
 Identities = 50/248 (20%), Positives = 82/248 (33%), Gaps = 78/248 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T K +++TG++ GIG    R L   G  V+++  +E++       LK +       
Sbjct: 9   MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT----- 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
                ++++    S+L      +   LDIL      T  D       + D+ KV      
Sbjct: 64  -IEVCNLANKEECSNLIS----KTSNLDILVCNAGITS-DTLAIRMKDQDFDKV------ 111

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                +  N           I  +      R++N+SS V                     
Sbjct: 112 -----IDINLKANFILNREAIKKMIQKRYGRIINISSIV--------------------- 145

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                            G   N G     + Y  SKA +   T+ L+         VN V
Sbjct: 146 -----------------GIAGNPG----QANYCASKAGLIGMTKSLSYEVATRGITVNAV 184

Query: 227 CPGFVKTD 234
            PGF+K+D
Sbjct: 185 APGFIKSD 192

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 79.5 bits (197), Expect = 7e-18
 Identities = 45/274 (16%), Positives = 72/274 (26%), Gaps = 92/274 (33%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            KK AVVTG+  G+G E V+ L+     V    R+ +      E      +        +
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEPI--------E 54

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELAVE 112
            DI          D +K     +D L              G    +W             
Sbjct: 55  SDIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVA-EWHAH---------- 102

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            L  N     +    L+P L  + S  ++ ++S                           
Sbjct: 103 -LDLNVIVPAELSRQLLPALR-AASGCVIYINSGA------------------------- 135

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------RYPKFCVNC 225
                        G   + G     + Y  SK  +        K       R     V+ 
Sbjct: 136 -------------GNGPHPGN----TIYAASKHALRGLADAFRKEEANNGIR-----VST 173

Query: 226 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPD 259
           V PG   T +      L   +G     ++ + P 
Sbjct: 174 VSPGPTNTPMLQG---LMDSQGTNFRPEIYIEPK 204

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 78.5 bits (194), Expect = 9e-18
 Identities = 29/236 (12%), Positives = 64/236 (27%), Gaps = 74/236 (31%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
           +     ++ G++  +G     +L  K   V+   R        V                
Sbjct: 1   SNAMKILLIGASGTLGSAVKERLEKKA-EVITAGRHS----GDV---------------- 39

Query: 64  QLDISDLASVSSLADFIKTQFGKLDIL--TKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
            +DI+++ S+  + +    Q GK+D +    G A   +S +   T E     + +   G 
Sbjct: 40  TVDITNIDSIKKMYE----QVGKVDAIVSATGSAT--FSPLTELTPEKNAVTISSKLGGQ 93

Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
                  I    L+D       +  +                                  
Sbjct: 94  INLVLLGIDS--LNDKGSFTLTTGIM---------------------------------- 117

Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-KFCVNCVCPGFVKTDIN 236
                           ++  ++   + A+ +  A   P    +N V P  ++   +
Sbjct: 118 -------MEDPI-VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD 165

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 53/247 (21%), Positives = 81/247 (32%), Gaps = 79/247 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAV-EKLKASGVDPELLLF 62
             K AVVTG+ +GIG       A  G TVV    D     L+ V +K+  + +       
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL------- 264

Query: 63  HQLDISDLASVSSLADFIKTQFG-KLDIL------TKGDA------EVDWSKVCYQTYEL 109
             LD++   +V  +   +    G K+DIL      T+ D       E  W  V       
Sbjct: 265 -TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAV------- 315

Query: 110 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTE 169
               +  N    ++  E L+    + +  R++ LSS                        
Sbjct: 316 ----IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMA---------------------- 349

Query: 170 ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVC 227
                           G   NRG     + Y  +KA +      LA         +N V 
Sbjct: 350 ----------------GIAGNRG----QTNYATTKAGMIGLAEALAPVLADKGITINAVA 389

Query: 228 PGFVKTD 234
           PGF++T 
Sbjct: 390 PGFIETK 396

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 78.7 bits (195), Expect = 1e-17
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 31/155 (20%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E  K   ++TG+++GIG  T R L +KG  V L ARDEKR      +L+ +       L 
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGA-------LP 54

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTYELA 110
              D+ +    +     ++  FG+L  L             +   E +W  V        
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLE-EWRLV-------- 105

Query: 111 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
              L TN  G        +P L       +VN+ S
Sbjct: 106 ---LDTNLTGAFLGIRHAVPALLRRGGGTIVNVGS 137

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPEL 59
           M     + A+VTG++ GIG    R L  +G+ VV  AR     +E    + K++G    L
Sbjct: 27  MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-IEELAAECKSAGYPGTL 85

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
           + + + D+S+   + S+   I++Q   +DI 
Sbjct: 86  IPY-RCDLSNEEDILSMFSAIRSQHSGVDIC 115

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 43/250 (17%), Positives = 75/250 (30%), Gaps = 74/250 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVEKLKASG 54
           K A +TG+ +G G     +LA+ G  ++     ++                 V+ ++  G
Sbjct: 14  KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG 73

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTY 107
                ++  Q D+ D  S+S+       + G+LDI+            +  W  V     
Sbjct: 74  SR---IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDV----- 125

Query: 108 ELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 166
                 +  N  G   T +  IP L++      +V +SS                     
Sbjct: 126 ------IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA------------------- 160

Query: 167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 224
                              G        P S  Y  +K  +    R+ A         VN
Sbjct: 161 -------------------GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVN 201

Query: 225 CVCPGFVKTD 234
            + P  V+T 
Sbjct: 202 SIHPSGVETP 211

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 85/291 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
           K   ++G ++GIG    +++A+ G  V L A+  +           A ++++ +G     
Sbjct: 10  KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA-- 67

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEVDWSKVCYQTYE 108
            L    DI D  +V++       QFG +DI             +      +  +      
Sbjct: 68  -LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLM------ 120

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                      GT    ++ IP ++  D+P ++ LS  +                     
Sbjct: 121 -----NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI--------------------- 154

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCV 226
                                        + Y ++K  +      +A+         N +
Sbjct: 155 --------------------RLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTL 194

Query: 227 CPGFVKTDINFHAGILS---------VEEGAESPVKLALLPDGGPTGRFFL 268
            P            +            E  A++   + L      TG   L
Sbjct: 195 WPRTTVATAAVQNLLGGDEAMARSRKPEVYADA-AYVVLNKPSSYTGNTLL 244

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 41/253 (16%), Positives = 69/253 (27%), Gaps = 67/253 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
             AV+TG  + IG     +L  +G  VV+     E      V +L A+     +L   + 
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC--KG 69

Query: 66  DISDLASVSS----LADFIKTQFGKLDIL------TK-----GDAEVDWSKVCYQTYELA 110
           D+S  +S+      + D     FG+ D+L                + + +          
Sbjct: 70  DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV 129

Query: 111 VECLKTNYYGTKQTCEALIPLLELSDSP-----RLVNLSSYVSALKDLPEKARAVLGDVE 165
            E   +N         A         +       +VNL   +                  
Sbjct: 130 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM------------------ 171

Query: 166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK-FCV 223
                                ++      P    Y ++K  +   TR  A    P+   V
Sbjct: 172 --------------------TDLPL----PGFCVYTMAKHALGGLTRAAALELAPRHIRV 207

Query: 224 NCVCPGFVKTDIN 236
           N V PG       
Sbjct: 208 NAVAPGLSLLPPA 220

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 51/258 (19%), Positives = 85/258 (32%), Gaps = 59/258 (22%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKA-SGVDPELLLF 62
           +KK  ++TG++ G G  T   LA  G  V  + RD   R    VE +   +  +   L  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVECLK 115
            +LD+    SV    D I  + G++D+L         G AE         T E   E   
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA-------FTPEQFAELYD 116

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N   T++   A +P +       L+ +SS                              
Sbjct: 117 INVLSTQRVNRAALPHMRRQKHGLLIWISS--------------SSSAG----------- 151

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
                           G  P+ + Y  +KA ++A     A+   ++    + + PG   +
Sbjct: 152 ----------------GTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTS 195

Query: 234 DINFHAGILSVEEGAESP 251
             N  A     ++ A   
Sbjct: 196 GTNHFAHSGVPDDHARQA 213

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 40/249 (16%), Positives = 73/249 (29%), Gaps = 75/249 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
           K   +TG+++GIG     + A  G  V + A+              A   + A+G     
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG-- 64

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEVDWSKVCYQTYE 108
            L  + DI +   V +        FG +DIL           T       +  +      
Sbjct: 65  -LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLM------ 117

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                 + N  G+    +A +P L  + +P ++ L+                        
Sbjct: 118 -----QQVNARGSFVCAQACLPHLLQAPNPHILTLAP--------------PPSLNPA-- 156

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCV 226
                                   W    + Y ++K  ++  T  LA  +      +N +
Sbjct: 157 ------------------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINAL 192

Query: 227 CPG-FVKTD 234
            P   + TD
Sbjct: 193 WPRTVIATD 201

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 78.3 bits (194), Expect = 3e-17
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTGS +G+GF     LA+ G  V+L         E+V+ L   G D         D
Sbjct: 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD---AHGVAFD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D  ++ +    +  +   +DIL
Sbjct: 67 VTDELAIEAAFSKLDAEGIHVDIL 90

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 39.0 bits (92), Expect = 8e-04
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 195 PHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
           P  + Y  +K  I   T  +A  + +F    N + PG++ TD+N
Sbjct: 154 PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN 197

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 78.3 bits (194), Expect = 3e-17
 Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 69/244 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL +  GV+    +  + 
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---TMAFRC 78

Query: 66  DISDLASVSSLADFIKTQFGKLD-------ILTKGDA----EVDWSKVCYQTYELAVECL 114
           D+S+   V  L + +K +FGKLD       I  +  A      ++ +V           +
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQV-----------I 127

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           + N +GT   C     LL  SD+P ++N+ S              +  +   +       
Sbjct: 128 EVNLFGTYYVCREAFSLLRESDNPSIINIGS--------------LTVEEVTM------- 166

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                               P+ SAY  SK  + + T+ LAK + ++   VN + PG+ +
Sbjct: 167 --------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR 206

Query: 233 TDIN 236
           T + 
Sbjct: 207 TKMT 210

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 77.5 bits (192), Expect = 3e-17
 Identities = 45/244 (18%), Positives = 77/244 (31%), Gaps = 76/244 (31%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++ A+VTG ++GIG      L ++G  V + +R+ +   EA + L A  +          
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPL--------PT 50

Query: 66  DISDLASVSSLADFIKTQFGKLDIL------TK-GDA----EVDWSKVCYQTYELAVECL 114
           D+        L        G L +L           A      +W +V           L
Sbjct: 51  DLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRV-----------L 98

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             +        +A  P +  +   R++ + S              V              
Sbjct: 99  YLHLDVAFLLAQAAAPHMAEAGWGRVLFIGS--------------VTTFTA--------- 135

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                            G      AY  +K  +   TR LAK + +    VN +CPG+V+
Sbjct: 136 -----------------GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVE 178

Query: 233 TDIN 236
           T+  
Sbjct: 179 TEFT 182

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 78.2 bits (193), Expect = 6e-17
 Identities = 38/275 (13%), Positives = 69/275 (25%), Gaps = 88/275 (32%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M   T   A+VTG+ K +G      L ++G  V L   R           L A   +  +
Sbjct: 41  MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 100

Query: 60  LLFHQLDISDLAS-----------------VSSLADFIKTQFGKLDIL------TKGDA- 95
            +  Q D+S++A+                  + L     T +G+ D+L            
Sbjct: 101 TV--QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL 158

Query: 96  ----EVDW---SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP------RLVN 142
               E                  +   +N        +A    +  + +        ++N
Sbjct: 159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 218

Query: 143 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKV 202
           +   +                                                  + Y +
Sbjct: 219 MVDAM--------------------------------------TNQPL----LGYTIYTM 236

Query: 203 SKAVINAYTRILAK----RYPKFCVNCVCPGFVKT 233
           +K  +   TR  A        +  VN V PG    
Sbjct: 237 AKGALEGLTRSAALELAPL--QIRVNGVGPGLSVL 269

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 76.8 bits (190), Expect = 8e-17
 Identities = 56/248 (22%), Positives = 82/248 (33%), Gaps = 82/248 (33%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 +  +VTG N+GIG    R  A  G  V +T R      E  E   A        
Sbjct: 16  PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG----EPPEGFLA-------- 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYE 108
              + DI+D   V      I+   G +++L      TK D       E D++ V      
Sbjct: 64  --VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSV------ 114

Query: 109 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLT 168
                ++TN  GT +  +     +  +   R+V +SS                       
Sbjct: 115 -----VETNLTGTFRVVKRANRAMLRAKKGRVVLISS----------------------- 146

Query: 169 EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCV 226
                 VV         G + + G     + Y  SKA +  + R LA+         N V
Sbjct: 147 ------VV---------GLLGSAG----QANYAASKAGLVGFARSLARELGSRNITFNVV 187

Query: 227 CPGFVKTD 234
            PGFV TD
Sbjct: 188 APGFVDTD 195

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 38/274 (13%), Positives = 69/274 (25%), Gaps = 86/274 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M   T   A+VTG+ K +G      L ++G  V L   R           L A   +  +
Sbjct: 4   MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 63

Query: 60  LLFHQLDISDLAS-----------------VSSLADFIKTQFGKLDIL------TKGDA- 95
            +  Q D+S++A+                  + L     T +G+ D+L            
Sbjct: 64  TV--QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTP 120

Query: 96  -----EVDW---SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP------RLV 141
                E                  +   +N        +A    +  + +        ++
Sbjct: 121 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSII 180

Query: 142 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 201
           N+   +                                                  + Y 
Sbjct: 181 NMVDAM--------------------------------------TNQPL----LGYTIYT 198

Query: 202 VSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT 233
           ++K  +   TR  A      +  VN V PG    
Sbjct: 199 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 76.8 bits (190), Expect = 1e-16
 Identities = 50/283 (17%), Positives = 86/283 (30%), Gaps = 87/283 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-------------ARDEKRGLEAVEKLKAS 53
           + A +TG+ +G G     +LA++G  ++                   +   E    ++  
Sbjct: 16  RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEVDWSKV 102
           G      L   LD+ D A++  L      QFG+LD++                +  W  V
Sbjct: 76  GRK---ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVL 161
                      +  N  GT +T  A +P ++E  +   +V +SS                
Sbjct: 133 -----------IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA-------------- 167

Query: 162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 221
                                   G  A     P +  Y  SK  + A T  LA    ++
Sbjct: 168 ------------------------GLKAT----PGNGHYSASKHGLTALTNTLAIELGEY 199

Query: 222 --CVNCVCPGFVKTDI----NFHAGILSVEEGAESPVKLALLP 258
              VN + P  V+T +                  S   + + P
Sbjct: 200 GIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP 242

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 76.0 bits (188), Expect = 1e-16
 Identities = 43/244 (17%), Positives = 77/244 (31%), Gaps = 82/244 (33%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             +  +VTG N+GIG    ++LA+ G  V +T R               GV        +
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------GV--------E 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL------TKGDA------EVDWSKVCYQTYELAVE 112
           +D++D  +V      ++   G +++L      +  DA      E  + KV          
Sbjct: 60  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKV---------- 108

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERI 172
            +  N  G  +  +     ++ +   R++ + S                           
Sbjct: 109 -INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS------------------------- 142

Query: 173 EMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCVNCVCPGF 230
                        G           + Y  SKA +    R +A+   K     N V PG+
Sbjct: 143 -------------GLWGIGN----QANYAASKAGVIGMARSIARELSKANVTANVVAPGY 185

Query: 231 VKTD 234
           + TD
Sbjct: 186 IDTD 189

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 75.6 bits (187), Expect = 2e-16
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
            K A++TG++ GIG  T R LA++G  V + AR  ++ L A  ++L A+G     +   
Sbjct: 6  QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAK---VHVL 61

Query: 64 QLDISDLASVSSLADFIKTQFGKLDIL 90
          +LD++D   V +         G LDIL
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDIL 88

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 45/256 (17%), Positives = 74/256 (28%), Gaps = 83/256 (32%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVEKLKASG 54
           K A +TG+ +G G      LA +G  ++                      E V +++A G
Sbjct: 29  KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 88

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDAEV------DWSKV 102
                ++  Q+D+ D  ++ +  D   TQ G+LDI+            +       W  +
Sbjct: 89  RR---IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVL 161
                      +  N  G   T    IP ++       +V  SS                
Sbjct: 146 -----------IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG-------------- 180

Query: 162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 221
                                   G         +   Y  SK  ++   R +A      
Sbjct: 181 ------------------------GLRGA----ENIGNYIASKHGLHGLMRTMALELGPR 212

Query: 222 --CVNCVCPGFVKTDI 235
              VN VCP  V T +
Sbjct: 213 NIRVNIVCPSSVATPM 228

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 74.9 bits (185), Expect = 3e-16
 Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 37/153 (24%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL---LLFHQL 65
            +VTG+  G G    R+   +G  V+ T R ++R L+ ++         EL   L   QL
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER-LQELKD--------ELGDNLYIAQL 53

Query: 66  DISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAVE 112
           D+ + A++  +   +  ++  +DIL              K   E DW        +    
Sbjct: 54  DVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVE-DWE----TMID---- 104

Query: 113 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
              TN  G      A++P +   +   ++N+ S
Sbjct: 105 ---TNNKGLVYMTRAVLPGMVERNHGHIINIGS 134

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 51/258 (19%), Positives = 87/258 (33%), Gaps = 85/258 (32%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAV-EKLKASGVD 56
                KK  ++TG++ GIG  T  +        + ++L AR  ++ LE + + +     +
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK-LEELKKTIDQEFPN 86

Query: 57  PELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVC 103
            ++ +  QLDI+    +    + +  +F  +DIL              +   E D   V 
Sbjct: 87  AKVHVA-QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATE-DIQDV- 143

Query: 104 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 163
                       TN        +A++P+ +  +S  +VNL S                  
Sbjct: 144 ----------FDTNVTALINITQAVLPIFQAKNSGDIVNLGS------------------ 175

Query: 164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------- 216
                                   IA R   P  S Y  SK  + A+T  L K       
Sbjct: 176 ------------------------IAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI 211

Query: 217 RYPKFCVNCVCPGFVKTD 234
           R     V  + PG V+T+
Sbjct: 212 R-----VILIAPGLVETE 224

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 69/256 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK--LKASGVDPELLLF 62
               AVVTG+ K IG     +L   G  VV+   +      ++     K       +   
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC-- 79

Query: 63  HQLDISD----LASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVE 112
            Q D+++     AS   + +     FG+ D+L            V          +    
Sbjct: 80  -QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138

Query: 113 C----LKTNYYGTKQTCEALIPLLELSDSP------RLVNLSSYVSALKDLPEKARAVLG 162
                + TN         +     + ++         +VNL   +               
Sbjct: 139 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM--------------- 183

Query: 163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK- 220
                                   +          S Y + K  +   T+  A    P  
Sbjct: 184 -----------------------VDQPC----MAFSLYNMGKHALVGLTQSAALELAPYG 216

Query: 221 FCVNCVCPGFVKTDIN 236
             VN V PG     + 
Sbjct: 217 IRVNGVAPGVSLLPVA 232

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 32/155 (20%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
                +TG+  G G    R+ A  G ++VLT R E+R L+A+  +L A       +L   
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAGELSAKTR----VLPLT 75

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAV 111
           LD+ D A++S+  D +  +F  L  L                D + DW        +   
Sbjct: 76  LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLD-DWD----TMVD--- 127

Query: 112 ECLKTNYYGTKQTCEALIPLLELSDSPR-LVNLSS 145
               TN  G   +   L+P L    +   +VNL S
Sbjct: 128 ----TNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 34/158 (21%)

Query: 1   MAEA-TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL 59
           M     KK  V+TG++ GIG    R+ + +G  ++L AR  +R L+A+            
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-LKALNL--------PN 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDIL------------TKGDAEVDWSKVCYQTY 107
            L  Q+D++D  +  +     +  +G  D +               +A  +W     + +
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN-EWQ----RMF 115

Query: 108 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
           +        N  G     +A++  ++  +   ++N+SS
Sbjct: 116 D-------VNVLGLLNGMQAVLAPMKARNCGTIINISS 146

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 74.1 bits (183), Expect = 8e-16
 Identities = 41/241 (17%), Positives = 80/241 (33%), Gaps = 84/241 (34%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +V  +++GIG      L+ +G  V + AR+E       E LK SG        H+  
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG--------HRYV 64

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TK-GDA----EVDWSKVCYQTYELAVECLK 115
           + D   +    D +  +  ++DIL       K G        D+ +            + 
Sbjct: 65  VCD---LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA-----------ID 110

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
           + +    +     +P ++     R+V ++S                              
Sbjct: 111 SLFLNMIKIVRNYLPAMKEKGWGRIVAITS----------------------------FS 142

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKT 233
           V           I N      S++   ++  +  + + L+     +   VNCV PG+ +T
Sbjct: 143 VI-------SP-IENLY---TSNS---ARMALTGFLKTLSFEVAPYGITVNCVAPGWTET 188

Query: 234 D 234
           +
Sbjct: 189 E 189

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 48/260 (18%), Positives = 83/260 (31%), Gaps = 87/260 (33%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT----------------ARDEKRGLEAVEKL 50
           K A VTG+ +G G     +LA +G  ++                  A   +   E  + +
Sbjct: 12  KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV 71

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDA-----EVD 98
           K        ++  ++D+ D  ++ +  D    Q G+LDI+         GD      E D
Sbjct: 72  KGHNRR---IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128

Query: 99  WSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKA 157
           W+++           +  N  G  +T +A +P ++       ++  SS V  LK      
Sbjct: 129 WTEM-----------IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS-VGGLK------ 170

Query: 158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 217
                                                PH+  Y  +K  +    R     
Sbjct: 171 -----------------------------------AYPHTGHYVAAKHGVVGLMRAFGVE 195

Query: 218 YPKF--CVNCVCPGFVKTDI 235
             +    VN V P  VKT +
Sbjct: 196 LGQHMIRVNSVHPTHVKTPM 215

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 54/260 (20%), Positives = 83/260 (31%), Gaps = 82/260 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVE 48
           M     K A +TG+ +G G     +LA  G  +V                  +   E V 
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100

Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL-----------TKGDAEV 97
            ++  G     ++  Q D+ DLAS+ ++ D    +FG +DIL                + 
Sbjct: 101 LVEEQGRR---IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQ 157

Query: 98  DWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEK 156
            WS +           L+TN  G    C A++P ++E      ++ +SS V         
Sbjct: 158 QWSDI-----------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV--------- 197

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
                                        G        P  S Y  SK  +      LA 
Sbjct: 198 -----------------------------GLRGA----PGQSHYAASKHGVQGLMLSLAN 224

Query: 217 RYPKF--CVNCVCPGFVKTD 234
              +    VN V PG V T+
Sbjct: 225 EVGRHNIRVNSVNPGAVNTE 244

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 65/244 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+E + K  +VTG++ G G        + G TV+ TAR      EA++ L A+   P+  
Sbjct: 1   MSE-SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAA--YPDRA 53

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVEC 113
               LD++D   +  +A  +  ++G++D+L         G  E         T     + 
Sbjct: 54  EAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE-------TTERELRDL 106

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
            + + +G  +   AL+P +    S  +VN+SS                            
Sbjct: 107 FELHVFGPARLTRALLPQMRERGSGSVVNISS---------------------------- 138

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFV 231
                            +      SAY  +KA +   +  LA     F   V  V PG  
Sbjct: 139 --------------FGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF 184

Query: 232 KTDI 235
           +T++
Sbjct: 185 RTNL 188

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 71.8 bits (177), Expect = 7e-15
 Identities = 51/265 (19%), Positives = 85/265 (32%), Gaps = 93/265 (35%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVE 48
           MA+   K A++TG  +G+G      LA  G  + +  R E   +            E V 
Sbjct: 5   MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA 64

Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL------TKGDA------E 96
            ++ +G      +  ++D+ D A++ S     +   G +DI       +   A       
Sbjct: 65  LVEKTGRR---CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVES 120

Query: 97  VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 156
             W +V           + TN  GT  T  A+ P +   +  R+V +SS +         
Sbjct: 121 AQWDEV-----------IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML--------- 160

Query: 157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 216
                                        G  AN       ++Y  SK  +   T+  A 
Sbjct: 161 -----------------------------GHSAN----FAQASYVSSKWGVIGLTKCAAH 187

Query: 217 -------RYPKFCVNCVCPGFVKTD 234
                        VN V PG ++T 
Sbjct: 188 DLVGYGIT-----VNAVAPGNIETP 207

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 37/277 (13%), Positives = 71/277 (25%), Gaps = 91/277 (32%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
              V+TG++ G+G E  +   ++G    LT R E + L  V   L  +        +   
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK-LSTVTNCLSNNV------GYRAR 54

Query: 66  DISDLASVSSLADFIKTQ---------FGKLDILTKGDAEVDWSKVCYQTYELAVECLKT 116
           D++    V  L + + +           G   +L + D E     +           ++ 
Sbjct: 55  DLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPE-QIQTL-----------IEN 102

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N          L+   +      +V + S                               
Sbjct: 103 NLSSAINVLRELVKRYKDQPV-NVVMIMS------------------------------- 130

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------RYPKFCVNCVCPG 229
                       A +      S Y   K  +      +         +     +  V PG
Sbjct: 131 -----------TAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMK-----IIAVYPG 174

Query: 230 FVKTDINFHAGI-------LSVEEGAESPVKLALLPD 259
            + T+    +G        +S E+ A           
Sbjct: 175 GMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIG 211

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 26/244 (10%), Positives = 57/244 (23%), Gaps = 78/244 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              +V G    +G   +      G TV+                       +  +    +
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-------------QADSNILVDGN 50

Query: 67  ISDLASVSSLADFIKT--QFGKLDIL--------TKGDAEVDWSKVCYQTYELAVECLKT 116
            +      S+ +   +  Q  ++D +            +  D+ K            +K 
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLM-------IKQ 103

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           + + +    +     L+      L    +                               
Sbjct: 104 SVWSSAIAAKLATTHLK--PGGLLQLTGAAA----------------------------- 132

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC----VNCVCPGFVK 232
                       A     P    Y ++KA ++  T  LA +         V  + P  + 
Sbjct: 133 ------------AMGPT-PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD 179

Query: 233 TDIN 236
           T +N
Sbjct: 180 TPMN 183

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 68.5 bits (168), Expect = 6e-14
 Identities = 26/247 (10%), Positives = 58/247 (23%), Gaps = 84/247 (34%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +V G    +G   V+   ++   V      E     A   +K +             
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSF---------- 57

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-------------TKGDAEVDWSKVCYQTYELAVEC 113
            ++ A   +          K+D +             +K   + +   +           
Sbjct: 58  -TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFK-NCDLM----------- 104

Query: 114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE 173
            K + + +  +       L+  +   L    +                            
Sbjct: 105 WKQSIWTSTISSHLATKHLK--EGGLLTLAGAKA-------------------------- 136

Query: 174 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPG 229
                          A  G  P    Y ++K  ++   + LA +            V P 
Sbjct: 137 ---------------ALDGT-PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV 180

Query: 230 FVKTDIN 236
            + T +N
Sbjct: 181 TLDTPMN 187

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 46/243 (18%), Positives = 75/243 (30%), Gaps = 62/243 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             AV+TG   G+G  T  +L  +G + VL       G    +KL  +       +F   D
Sbjct: 13  LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC------VFAPAD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDIL------TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           ++    V +     K +FG++D+              +  K    T E     L  N  G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

Query: 121 T----KQTCEALIPLLELSDSPR--LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
           T    +     +          R  ++N +S V+A                         
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTAS-VAAF------------------------ 161

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVK 232
                     EG++         +AY  SK  I   T  +A+        V  + PG   
Sbjct: 162 ----------EGQVG-------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG 204

Query: 233 TDI 235
           T +
Sbjct: 205 TPL 207

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 40/255 (15%), Positives = 79/255 (30%), Gaps = 75/255 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + +     A+V+G   G+G  TVR+L + G+ VV+     ++G    ++L          
Sbjct: 25  IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE----- 79

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDI-------------LTKGDAEV---DWSKVCY 104
            F   +++   SV +  +                        + +  +      ++K   
Sbjct: 80  -FVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKT-- 136

Query: 105 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR--LVNLSSYVSALKDLPEKARAVLG 162
               + +  L   Y   +    ++       +  R  LV  +S ++              
Sbjct: 137 ----IDLY-LNGTYNVARLVAASIAAAEPRENGERGALVLTAS-IAGY------------ 178

Query: 163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 221
                                 EG+I         +AY  +KA +   T   A+      
Sbjct: 179 ----------------------EGQIG-------QTAYAAAKAGVIGLTIAAARDLSSAG 209

Query: 222 -CVNCVCPGFVKTDI 235
             VN + PG +KT I
Sbjct: 210 IRVNTIAPGTMKTPI 224

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 27/154 (17%)

Query: 6   KKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +   ++TG + GIG     +LAS   +   V  T RD K      E  +A    P  L  
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDIL-------TKGDAEVDWSKVCYQTYELAVECLK 115
            QLD+ D  SV++  + +    G++D+L         G  E            L  + + 
Sbjct: 62  LQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLE-----------ALGEDAVA 108

Query: 116 ----TNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
                N  GT +  +A +P ++   S R++   S
Sbjct: 109 SVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS 142

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          +  +VTG++ G+G    R LA +G TV+        G E   +L A+      + F   D
Sbjct: 8  RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA------VRFRNAD 61

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          +++ A  ++   F K +FG +  L
Sbjct: 62 VTNEADATAALAFAKQEFGHVHGL 85

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 63.7 bits (156), Expect = 5e-12
 Identities = 60/268 (22%), Positives = 87/268 (32%), Gaps = 81/268 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKL-KASGVDPELLLFHQ 64
           + A+VTG + GIG       A +G  V +     E+   + V+ L +  G    LL    
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL---P 106

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECL---------K 115
            D+SD +   SL    +   G LDIL              QT    ++ L          
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAG--------KQTAIPEIKDLTSEQFQQTFA 158

Query: 116 TNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMV 175
            N +      +  IPLL    S  ++  SS             A                
Sbjct: 159 VNVFALFWITQEAIPLLPKGAS--IITTSSIQ-----------AYQPS------------ 193

Query: 176 VKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------RYPKFCVNCVCP 228
                              PH   Y  +KA I  Y+R LAK       R     VN V P
Sbjct: 194 -------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIR-----VNIVAP 229

Query: 229 GFVKTDINFHAGILS--VEE-GAESPVK 253
           G + T +    G     + + G ++P+K
Sbjct: 230 GPIWTALQISGGQTQDKIPQFGQQTPMK 257

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 61.0 bits (149), Expect = 4e-11
 Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 77/247 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  ++TG + GIG       A +G  + +   DE+      ++  +  GV   LL     
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL---PG 104

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECL---------KT 116
           D+SD      +      Q G L+IL    A         Q  +  +E +         + 
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVA--------QQYPQQGLEYITAEQLEKTFRI 156

Query: 117 NYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV 176
           N +      +A +  L+  D   ++N +S V           A  G+             
Sbjct: 157 NIFSYFHVTKAALSHLKQGDV--IINTASIV-----------AYEGN------------- 190

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------RYPKFCVNCVCPG 229
                                  Y  +K  I A+TR L++       R     VN V PG
Sbjct: 191 ------------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIR-----VNGVAPG 227

Query: 230 FVKTDIN 236
            + T + 
Sbjct: 228 PIWTPLI 234

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
            AVVTG   G+G  T ++L   G  VV+         E V              F   D
Sbjct: 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG----EDVVADLGDRA-----RFAAAD 60

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++D A+V+S  D +    G L I+
Sbjct: 61 VTDEAAVASALD-LAETMGTLRIV 83

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 16/84 (19%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A+VTG   G+G      L ++G  VV+     + G + +              + + D
Sbjct: 3  RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 47

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          ++    V       + +   L  +
Sbjct: 48 VTREEDVRRAVARAQ-EEAPLFAV 70

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVV      +G  +   LA +G  VVL  R   +   A + +               +
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN----VTAAE 175

Query: 67  ISDLASVSSL 76
            +D AS +  
Sbjct: 176 TADDASRAEA 185

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          +  VV G  + + I +   R L   G  ++ T   E R  ++V +L A  +D    +   
Sbjct: 8  RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHEL-AGTLDRNDSIILP 65

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+++ A + +    IK Q G +  +
Sbjct: 66 CDVTNDAEIETCFASIKEQVGVIHGI 91

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++TG  SNK I +   + +  +G  +  T   + +    VEKL  +  +P  +L   
Sbjct: 27  KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDR--VEKL-CAEFNPAAVL--P 81

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+     +  L   +   +  LD +
Sbjct: 82  CDVISDQEIKDLFVELGKVWDGLDAI 107

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 45/163 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           K  ++TG+  G+G     + A  G  VV+            + K     V+++  +G   
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDIL------------TKGDAEVDWSKV 102
                    ++D  +V      ++T    FG + ++             K   + D+  V
Sbjct: 69  ---------VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEK-DYKLV 118

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
                      +  +  G     +A  P  +     R+VN SS
Sbjct: 119 -----------IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS 150

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1   MAEATKKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE 58
           M     K  V+ G  + + I F   + L   G  +V T R E R  + +EKL    ++  
Sbjct: 27  MVNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKL-LEQLNQP 84

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
               +Q+D+     V +  + I    G +D +
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGV 116

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVV----------LTARDEKRGLEAVEKL 50
           M     +  +VTG+  GIG       A++G  VV            A         V+++
Sbjct: 22  MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI 81

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
            A+G +    +    +++D    + L       FG LD+L
Sbjct: 82  TAAGGEA---VADGSNVADWDQAAGLIQTAVETFGGLDVL 118

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K A+V G  + + +GF    +L   G  V L+ + E R     EKL A  +   LL   +
Sbjct: 9  KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKL-AEALGGALLF--R 64

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++    + +L   +K  FG LD L
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYL 90

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 21/95 (22%)

Query: 7   KYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KY ++TG+ KG IG E ++ L   G  VV+T                S    ++  ++Q 
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVT---------------TSRFSKQVTDYYQS 521

Query: 66  DISDLASV-SSLADFIKTQFGKLDILTKGDAEVDW 99
             +   +  S+L      Q  K D+    +A +++
Sbjct: 522 IYAKYGAKGSTLIVVPFNQGSKQDV----EALIEF 552

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 18/86 (20%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  +VTG  S   I +   + +  +G  +  T +++ +    VE+  A+ +  +++L  Q
Sbjct: 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEF-AAQLGSDIVL--Q 65

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+++ AS+ ++   +   + K D  
Sbjct: 66 CDVAEDASIDTMFAELGKVWPKFDGF 91

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++TG  SN+ I +   +    +G  +  T   + R  + + +  A+    EL+    
Sbjct: 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEF-AAEFGSELVF--P 70

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++D A + +L   +KT +  LD L
Sbjct: 71 CDVADDAQIDALFASLKTHWDSLDGL 96

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  V+ G  ++K + +   + + ++G  V LT   E    + V+ L A  +  +L +   
Sbjct: 31  KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-TFKKRVDPL-AESLGVKLTV--P 86

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+SD  SV ++   +  ++G LD +
Sbjct: 87  CDVSDAESVDNMFKVLAEEWGSLDFV 112

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++ G  +N+ I +   +     G  +  T + +    + VE L A  +   +     
Sbjct: 32  KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD-ALKKRVEPL-AEELGAFVAG--H 87

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D++D AS+ ++ + ++ ++GKLD L
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFL 113

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++ G  +NK I +   +   ++G T+  T  +E    + V  + A  ++   +   +
Sbjct: 7  KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPI-AQELNSPYVY--E 62

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
          LD+S      SL + +K   G LD +
Sbjct: 63 LDVSKEEHFKSLYNSVKKDLGSLDFI 88

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 45/163 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           +  +VTG+  G+G       A +G  VV+           +      + VE+++  G   
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 69

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDIL------------TKGDAEVDWSKV 102
                    +++  SV +    +KT    FG++D++            ++   E DW  +
Sbjct: 70  ---------VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDE-DWDII 119

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
                       + +  G+ Q   A    ++  +  R++  +S
Sbjct: 120 -----------QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS 151

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  +V+G  ++  I F   R    +G  +VLT  D  R ++ +       +  +  L  +
Sbjct: 8  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPAKAPLL-E 62

Query: 65 LDISDLASVSSLADFIKTQFG---KLDIL 90
          LD+ +   ++SLA  +    G   KLD +
Sbjct: 63 LDVQNEEHLASLAGRVTEAIGAGNKLDGV 91

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A++TG  + + I +   +    +G  +  T     +  + V ++ A G   +L++  +
Sbjct: 22  KRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-KLEKRVREI-AKGFGSDLVV--K 77

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+S    + +L  F++  +G LDI+
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDII 103

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M   ++    VTG++  IG   V +L  +G TV  T RD     + V+ L         L
Sbjct: 1  MGSQSET-VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV-KKVKHLLDLPKAETHL 58

Query: 61 LFHQLDISDLAS 72
             + D++D  S
Sbjct: 59 TLWKADLADEGS 70

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 45/163 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           + AVVTG+  G+G E     A +G  VV+             ++     V++++ +G + 
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE- 78

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDIL------------TKGDAEVDWSKV 102
                    ++D  SV   A  I+T    FG++DIL             K   + DW+ V
Sbjct: 79  --------AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQ-DWNLV 129

Query: 103 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 145
                         +  G+ +  +A  P ++  +  R++  SS
Sbjct: 130 -----------NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS 161

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	275
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.98
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.89
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.88
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.87
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.86
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.85
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.85
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.84
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.84
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.84
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.83
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.83
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.83
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.82
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.82
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.82
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.81
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.81
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.8
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.8
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.8
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.79
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.78
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.77
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.76
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.76
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.76
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.75
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.74
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.73
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.73
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.7
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.7
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.67
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.66
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.65
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.63
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.62
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.59
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.57
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.55
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.55
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.54
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.52
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.51
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.51
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.5
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.48
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.4
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.35
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.05
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.95
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.83
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.75
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.73
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.68
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.6
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.59
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.55
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.54
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.53
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.52
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.45
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.41
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.4
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.38
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.38
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.33
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.33
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.32
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.27
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.25
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.25
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.24
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.24
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.13
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.12
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.1
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.06
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.03
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.02
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.01
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.01
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.97
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.95
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.93
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.9
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.89
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.81
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.79
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.79
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.76
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.73
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.71
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.69
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.68
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.63
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.63
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.62
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.6
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.59
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.59
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.57
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.56
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.56
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.53
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.52
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.5
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.47
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.46
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.45
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.44
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.43
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.43
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.42
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.41
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.36
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.36
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.36
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.34
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.32
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.31
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.25
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.24
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.22
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.12
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.12
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.08
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.07
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.05
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.03
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.02
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.02
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.99
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.98
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.96
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.95
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.87
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.87
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.86
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.86
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.83
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.82
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.8
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.8
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.8
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.79
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.79
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.78
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.76
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.74
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.73
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.71
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.67
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.66
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.63
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.63
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.6
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.59
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.58
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.51
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.5
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.5
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.49
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.45
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.43
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.42
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.42
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.41
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.41
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.38
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.37
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.34
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.34
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.33
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.33
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.3
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.29
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.24
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.23
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.22
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.05
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.04
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.03
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.03
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.01
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.98
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.94
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.89
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.89
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.79
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.65
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.65
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.64
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.64
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.63
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.62
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.54
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.52
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.51
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.44
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.42
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.4
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.38
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.35
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.34
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.33
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.3
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.26
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.21
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	95.19
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	95.19
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.17
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.17
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.16
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.12
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.11
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.1
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.08
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.06
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.06
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	94.95
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	94.94
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	94.92
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.84
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	94.83

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=6.8e-50  Score=341.55  Aligned_cols=229  Identities=24%  Similarity=0.272  Sum_probs=205.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++||++|||||++|||+++|+.|+++|++|++++|+.+++++..++++..+.+   +.++++|++++++++++++++.
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---VLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999877654   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||+.. ..++.+.+.++|++++++|+.|+|+++|+++|+|+++++|+|||+||+++..+.        
T Consensus        80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~--------  151 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG--------  151 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS--------
T ss_pred             HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC--------
Confidence            99999999999999764 467888999999999999999999999999999998889999999999988765        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++..+|++||+|+.+|+|++|.|+  .|||||+|+||+|+|+|...
T Consensus       152 ----------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~  197 (254)
T 4fn4_A          152 ----------------------------------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLG  197 (254)
T ss_dssp             ----------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTS
T ss_pred             ----------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccc
Confidence                                              678899999999999999999999  58999999999999999754


Q ss_pred             CCCCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .........     ...+++++.+|++.+....||+++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~  239 (254)
T 4fn4_A          198 SSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASF  239 (254)
T ss_dssp             CSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            432222111     1246788999999999999999999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.6e-49  Score=336.59  Aligned_cols=228  Identities=21%  Similarity=0.239  Sum_probs=205.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++++.|+++|++|++++|+.+++++..+++...+.+   +..+++|++++++++++++++.+
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD---AHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---EEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHHH
Confidence            679999999999999999999999999999999999999999999999877654   88999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +||+||+||||||+....++.+.+.++|++++++|+.|+|+++|+++|+|.+ +++|+|||+||+.+..+.         
T Consensus        83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~---------  153 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR---------  153 (255)
T ss_dssp             TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC---------
T ss_pred             HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC---------
Confidence            9999999999999988889999999999999999999999999999999964 466899999999988665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||+|+.+|+|++|.|+  .|||||+|+||+|+|+|....
T Consensus       154 ---------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~  200 (255)
T 4g81_D          154 ---------------------------------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL  200 (255)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc
Confidence                                             778999999999999999999999  589999999999999987532


Q ss_pred             CC---CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..   ....-....|++++.+|++.+....||+++.++|
T Consensus       201 ~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          201 IEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             HTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             cCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            11   0011123568999999999999999999999887

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.3e-47  Score=330.50  Aligned_cols=223  Identities=22%  Similarity=0.261  Sum_probs=194.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.   .   +...+++|++++++++++++++.+
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---~---~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---G---GAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---C---CeEEEEecCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999888877763   2   277899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||.....++.+.+.++|++.+++|+.|+|+++|+++|+|++  +|+|||+||+.+..+.          
T Consensus       100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~----------  167 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGT----------  167 (273)
T ss_dssp             HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCC----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCC----------
Confidence            9999999999999988888999999999999999999999999999999964  4799999999888765          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||+|+.+|+|++|.|+  .|||||+|+||+|+|++.....
T Consensus       168 --------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  215 (273)
T 4fgs_A          168 --------------------------------PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELA  215 (273)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-------
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhh
Confidence                                            778899999999999999999999  5899999999999999875543


Q ss_pred             CCChhh--------hhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSVEE--------GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~~~--------~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ...+.+        ....|++++.+|++++....||+++.++|
T Consensus       216 ~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~  258 (273)
T 4fgs_A          216 GKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSF  258 (273)
T ss_dssp             --CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            222211        23468899999999999999999999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=3.4e-46  Score=319.86  Aligned_cols=225  Identities=24%  Similarity=0.208  Sum_probs=190.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++++.|+++|++|++++|+.++.+ ..+++...+..   ..++++|++++++++++++++.+
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPR---ATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTT---CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCC---EEEEEeecCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999987654 33455554443   88899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||+..... .+.+.++|++.+++|+.++|+++|+++|+|+++ +|+|||+||+.+..+.          
T Consensus        80 ~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~----------  147 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQ----------  147 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCC----------
T ss_pred             HhCCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCC----------
Confidence            9999999999999865444 367899999999999999999999999999765 4899999999887665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||+|+.+|+|++|.|+  .|||||+|+||+|+|+|.....
T Consensus       148 --------------------------------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  195 (258)
T 4gkb_A          148 --------------------------------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI  195 (258)
T ss_dssp             --------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh
Confidence                                            778899999999999999999999  5899999999999999975432


Q ss_pred             CC--Ch-----hhhhccce-eecccCCCCCcceEeccCcccCC
Q 023896          241 IL--SV-----EEGAESPV-KLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~--~~-----~~~a~~~~-~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..  .+     +...+.|+ +++.+|+++++...||+++.++|
T Consensus       196 ~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~  238 (258)
T 4gkb_A          196 ATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH  238 (258)
T ss_dssp             -------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            11  11     11234566 47888999999999999999886

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8e-46  Score=315.12  Aligned_cols=212  Identities=22%  Similarity=0.304  Sum_probs=183.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|+||||||++|||+++|++|+++|++|++++|+.+++++..++    ..   .+..+++|++++++++++++++.++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~~---~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----RP---NLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----CT---TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cC---CEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            59999999999999999999999999999999998776554332    22   288899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +||+||||||.....++.+.+.++|++++++|+.++|+++|++.|+|.+++ |+|||+||+.+..+.             
T Consensus        75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~-------------  140 (247)
T 3ged_A           75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE-------------  140 (247)
T ss_dssp             CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC-------------
Confidence            999999999998888899999999999999999999999999999998765 899999999888665             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCCCCCCCh
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHAGILSV  244 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~~~~~~~  244 (275)
                                                   +....|++||+|+.+|+|++|.|+ ++||||+|+||+|+|++...   +..
T Consensus       141 -----------------------------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~---~~~  188 (247)
T 3ged_A          141 -----------------------------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---FTQ  188 (247)
T ss_dssp             -----------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------CCH
T ss_pred             -----------------------------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH---HHH
Confidence                                         778899999999999999999999 89999999999999998643   334


Q ss_pred             hhhhccceeecccCCCCCcceEeccC
Q 023896          245 EEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       245 ~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +.....|++++.+|++++....||++
T Consensus       189 ~~~~~~Pl~R~g~pediA~~v~fL~s  214 (247)
T 3ged_A          189 EDCAAIPAGKVGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             HHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHHh
Confidence            44455666666666666666666664

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.8e-46  Score=318.08  Aligned_cols=221  Identities=20%  Similarity=0.201  Sum_probs=191.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++++.|+++|++|++++|+..  ++..+++...+.+   ...+++|++++++++++++    
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGN---ASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCC---EEEEECCTTSTTTTTTSST----
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCc---EEEEEccCCCHHHHHHHHH----
Confidence            478999999999999999999999999999999999865  3455566665544   8899999999999877653    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                       +++||+||||||+....++.+.+.++|++++++|+.|+|+++|+++|+|.+++ +|+|||+||+.+..+.         
T Consensus        77 -~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---------  146 (247)
T 4hp8_A           77 -DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---------  146 (247)
T ss_dssp             -TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------
T ss_pred             -hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---------
Confidence             58999999999998888899999999999999999999999999999997654 6899999999988765         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||+++.+|+|++|.|+  .|||||+|+||+|+|+|....
T Consensus       147 ---------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~  193 (247)
T 4hp8_A          147 ---------------------------------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL  193 (247)
T ss_dssp             ---------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             ---------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc
Confidence                                             778899999999999999999999  689999999999999997532


Q ss_pred             CCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..-   ...-....|++++.+|+++++...||+++.++|
T Consensus       194 ~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  232 (247)
T 4hp8_A          194 RADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADY  232 (247)
T ss_dssp             HTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTT
T ss_pred             ccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            111   111124578999999999999999999999987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-43  Score=311.70  Aligned_cols=272  Identities=55%  Similarity=0.866  Sum_probs=223.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~   80 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+..++++..+++...+..  ++.++++|+++. ++++++++++
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE--NVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC--SEEEEECCTTSCHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEccCCCcHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999888888766433  388999999998 9999999999


Q ss_pred             HhhcCCccEEEcCCccccc------------------------------chhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDW------------------------------SKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                      .+.+++||+||||||+...                              .++...+.+.+++.+++|+.|++.++++++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            9999999999999998632                              1233567889999999999999999999999


Q ss_pred             hhhcCCCCeEEEEecCccccCCCc-HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHH
Q 023896          131 LLELSDSPRLVNLSSYVSALKDLP-EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  209 (275)
Q Consensus       131 ~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  209 (275)
                      .|++++.++||++||..+..+... ......+.+....+.+........+............+++++...|++||+++++
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            999888899999999998876543 2333344455555555555555555555555555666776778899999999999


Q ss_pred             HHHHHHHhCCCeEEEeecCCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          210 YTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       210 ~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +++.++.++++|+||+|+||+|+|+|.......++++.++.+++++..+.+...+.+|+.++.++|
T Consensus       246 ~~~~la~e~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s~~a~~  311 (311)
T 3o26_A          246 YTRVLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELSAF  311 (311)
T ss_dssp             HHHHHHHHCTTSEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHTCCSSCCCSCEETC------
T ss_pred             HHHHHHhhcCCceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHhCCCCCCCceEeccccccCC
Confidence            999999999889999999999999999888889999999999999998999999999999999887

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.6e-44  Score=310.05  Aligned_cols=229  Identities=17%  Similarity=0.139  Sum_probs=198.7

Q ss_pred             CcccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |++++||++|||||+|  |||+++|+.|+++|++|++++|+.+.++++.+.+.+.+..  ++.++++|++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP--EAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCS--SCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC--cEEEEEccCCCHHHHHHHHH
Confidence            8999999999999875  9999999999999999999999999888888887765443  28889999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccc----hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           79 FIKTQFGKLDILTKGDAEVDWS----KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.++||+||+||||||+....    .+.+.+.++|+..+++|+++++.+++.+.+.++  ++|+|||+||+.+..+.  
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~--  154 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAV--  154 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCC--
T ss_pred             HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCc--
Confidence            9999999999999999976543    345678899999999999999999999999875  45899999999888665  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||+|+.+|+|+++.|+  .|||||+|+||+|+
T Consensus       155 ----------------------------------------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~  194 (256)
T 4fs3_A          155 ----------------------------------------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIR  194 (256)
T ss_dssp             ----------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             ----------------------------------------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCC
Confidence                                                    778999999999999999999999  58999999999999


Q ss_pred             cCCcCCCCCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          233 TDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       233 T~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      |++.......   ........|++++.+|+++++...||+++.++|
T Consensus       195 T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~  240 (256)
T 4fs3_A          195 TLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSG  240 (256)
T ss_dssp             SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             ChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9997654211   011123568888999999999999999998876

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.3e-45  Score=310.61  Aligned_cols=213  Identities=23%  Similarity=0.271  Sum_probs=180.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++||++|||||++|||++++++|+++|++|++++|+.++++..      .   ..++..+++|++++++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------~---~~~~~~~~~Dv~~~~~v~~~~~----~   75 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------R---HPRIRREELDITDSQRLQRLFE----A   75 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------C---CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------h---cCCeEEEEecCCCHHHHHHHHH----h
Confidence            5899999999999999999999999999999999998754321      1   1248899999999999877664    5


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ||+||+||||||+..  +..+.+.++|++++++|+.|+|+++|+++|.|+++ +|+|||+||+.+..+.           
T Consensus        76 ~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~-----------  141 (242)
T 4b79_A           76 LPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGS-----------  141 (242)
T ss_dssp             CSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCC-----------
T ss_pred             cCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCC-----------
Confidence            799999999999754  45678999999999999999999999999999764 5899999999988765           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGI  241 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~  241 (275)
                                                     ++...|++||+++.+|+|++|.|+  .|||||+|+||+|+|+|......
T Consensus       142 -------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~  190 (242)
T 4b79_A          142 -------------------------------ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA  190 (242)
T ss_dssp             -------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC
T ss_pred             -------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC
Confidence                                           778899999999999999999999  58999999999999999754321


Q ss_pred             CChhh----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          242 LSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       242 ~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                       .++.    ..+.|++++.+|+++++...||+++.++|
T Consensus       191 -~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  227 (242)
T 4b79_A          191 -DVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASF  227 (242)
T ss_dssp             -CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             -CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             2221    23578999999999999999999999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.5e-45  Score=312.71  Aligned_cols=220  Identities=20%  Similarity=0.230  Sum_probs=187.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++||++|||||++|||+++++.|+++|++|++++|+..+          ...   ....+++|++++++++++++++.
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~---~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLP---EELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSC---TTTEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCC---cEEEEEcCCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999998642          111   14578899999999999999999


Q ss_pred             hhcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ++||+||+||||||+...  .++.+.+.++|++.+++|+.++|+++|+++|+|+++++|+|||+||+.+..+.       
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~-------  146 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL-------  146 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC-------
Confidence            999999999999997543  46778899999999999999999999999999998888999999998887653       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        +.+...|++||+|+.+|+|+++.|+  .|||||+|+||+|+|++..
T Consensus       147 ----------------------------------~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~  192 (261)
T 4h15_A          147 ----------------------------------PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASV  192 (261)
T ss_dssp             ----------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred             ----------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchh
Confidence                                              1356889999999999999999999  5899999999999999853


Q ss_pred             CC-------CCCChh--------hhhccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HA-------GILSVE--------EGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~-------~~~~~~--------~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..       .....+        .....|++++.+|+++++...||+++.++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~  245 (261)
T 4h15_A          193 RLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAAS  245 (261)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            21       011111        123468888999999999999999998876

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-42  Score=299.42  Aligned_cols=232  Identities=25%  Similarity=0.259  Sum_probs=189.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|++++++++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ---AIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHH
Confidence            67888999999999999999999999999999999999999988888888655433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+++|++|+||||||+... .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||+.+....       
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-------  172 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF-------  172 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC-------
Confidence            9999999999999998643 66778899999999999999999999999999998888999999998876521       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       +.++...|++||++++.+++.++.|+  .+||||+|+||+|+|++..
T Consensus       173 ---------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  219 (283)
T 3v8b_A          173 ---------------------------------TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISD  219 (283)
T ss_dssp             ---------------------------------CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTC
T ss_pred             ---------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccc
Confidence                                             11567899999999999999999998  5899999999999999875


Q ss_pred             CCCCCChhh--------hhccce--eecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILSVEE--------GAESPV--KLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~~~--------~a~~~~--~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ........+        ....++  ++...|++.+....|++++.++|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~  267 (283)
T 3v8b_A          220 NTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH  267 (283)
T ss_dssp             CTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTT
T ss_pred             ccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccC
Confidence            432111110        011222  44555556666666666665543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1e-42  Score=297.42  Aligned_cols=222  Identities=23%  Similarity=0.267  Sum_probs=188.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...      ...+++|++++++++++++++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN------GKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------EEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc------ceEEEEeCCCHHHHHHHHHHH
Confidence            56778999999999999999999999999999999999999888877776432      678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+++|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  149 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN--------  149 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC--------
Confidence            999999999999999987777888899999999999999999999999999988788999999998776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       150 ----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  195 (248)
T 3op4_A          150 ----------------------------------AGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA  195 (248)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT
T ss_pred             ----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh
Confidence                                              678899999999999999999998  58999999999999998653


Q ss_pred             CC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 AG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..               ..+|++.++.++.++.......+|..+..+
T Consensus       196 ~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vd  242 (248)
T 3op4_A          196 LNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVN  242 (248)
T ss_dssp             SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEEC
Confidence            21               235555555555544433334445444443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-42  Score=298.48  Aligned_cols=226  Identities=26%  Similarity=0.245  Sum_probs=193.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..  ++.++++|++++++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG--KVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS--CEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC--cEEEEEcCCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999888888765422  3889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  159 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+. .+.       
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------  155 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY-------  155 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-------
Confidence            999999999999999987777888899999999999999999999999999998888999999998875 332       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++..
T Consensus       156 -----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  200 (262)
T 3pk0_A          156 -----------------------------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL  200 (262)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH
T ss_pred             -----------------------------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccc
Confidence                                               667899999999999999999998  5899999999999998753


Q ss_pred             CCC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...               ..+|++.++.++.++.......+|+.+..+
T Consensus       201 ~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vd  248 (262)
T 3pk0_A          201 ENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVD  248 (262)
T ss_dssp             TTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence            221               235666666666555544444555555443

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-42  Score=296.61  Aligned_cols=218  Identities=22%  Similarity=0.317  Sum_probs=187.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT---ALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999988888766433   888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.           
T Consensus        79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------  147 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------  147 (264)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------
Confidence            999999999999987778888899999999999999999999999999988788999999998887654           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCCC---
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAG---  240 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~~---  240 (275)
                                                     ++...|++||+++++++++++.++++||||+|+||+|+|++.....   
T Consensus       148 -------------------------------~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~  196 (264)
T 3tfo_A          148 -------------------------------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE  196 (264)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------
T ss_pred             -------------------------------CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh
Confidence                                           6778999999999999999999999999999999999999864321   


Q ss_pred             -----------CCChhhhhccceeecccCCCCCcceE
Q 023896          241 -----------ILSVEEGAESPVKLALLPDGGPTGRF  266 (275)
Q Consensus       241 -----------~~~~~~~a~~~~~~~~~~~~~~~~~~  266 (275)
                                 ..+|++.++.++.++..+.....+..
T Consensus       197 ~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i  233 (264)
T 3tfo_A          197 TMAAMDTYRAIALQPADIARAVRQVIEAPQSVDTTEI  233 (264)
T ss_dssp             -----------CCCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHhcCCccCccceE
Confidence                       25778888877777776654444433

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3e-42  Score=297.17  Aligned_cols=192  Identities=25%  Similarity=0.310  Sum_probs=175.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...... .++.++++|++++++++++++++.
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999998888888763221 238889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  153 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---------  153 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC---------
Confidence            99999999999999987778888999999999999999999999999999998888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||+++++++++++.|+  .+||||+|+||+|+|++.
T Consensus       154 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  197 (265)
T 3lf2_A          154 ---------------------------------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQW  197 (265)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             ---------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchh
Confidence                                             678899999999999999999998  589999999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.5e-42  Score=300.20  Aligned_cols=229  Identities=20%  Similarity=0.203  Sum_probs=192.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|++++++++++++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~   97 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD---AEAVAFDVTSESEIIEAFARL   97 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---EEECCCCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999988888765543   888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~--------  169 (271)
T 4ibo_A           98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR--------  169 (271)
T ss_dssp             HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC--------
T ss_pred             HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC--------
Confidence            999999999999999987777888899999999999999999999999999988778999999998887654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       170 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (271)
T 4ibo_A          170 ----------------------------------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQA  215 (271)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhh
Confidence                                              677899999999999999999998  58999999999999998642


Q ss_pred             CCC---CChhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          239 AGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       239 ~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ...   .........++++...|++.+....|++++.++
T Consensus       216 ~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~  254 (271)
T 4ibo_A          216 LIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASD  254 (271)
T ss_dssp             HHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             cccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            200   000011223455555555666666666555544

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=7.8e-42  Score=296.38  Aligned_cols=231  Identities=19%  Similarity=0.211  Sum_probs=194.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---ALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999988888888765443   8889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ +++||++||..+..+.        
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~--------  176 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN--------  176 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC--------
Confidence            9999999999999998877788889999999999999999999999999998765 3899999998876542        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      .+++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       177 --------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  224 (276)
T 3r1i_A          177 --------------------------------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP  224 (276)
T ss_dssp             --------------------------------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG
T ss_pred             --------------------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc
Confidence                                            11356789999999999999999998  58999999999999998754


Q ss_pred             CCCCChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ............+++++..|++.+....|++++.++|
T Consensus       225 ~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~  261 (276)
T 3r1i_A          225 LADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSY  261 (276)
T ss_dssp             GGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            3221112223345566666777777777777666544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.1e-42  Score=296.70  Aligned_cols=223  Identities=19%  Similarity=0.216  Sum_probs=190.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---AIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999998888888765443   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  154 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN---------  154 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC---------
Confidence            999999999999998776666 7899999999999999999999999999998888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++....
T Consensus       155 ---------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          155 ---------------------------------VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence                                             678899999999999999999998  589999999999999975321


Q ss_pred             ----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                      ...+|+|.++.++.++.......+|+.+..+
T Consensus       202 ~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vd  248 (256)
T 3gaf_A          202 LTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVS  248 (256)
T ss_dssp             CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEEC
Confidence                            1235566666655555433344445544443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-41  Score=291.19  Aligned_cols=192  Identities=23%  Similarity=0.266  Sum_probs=173.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC------------hhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+            .+.++...+.+...+..   +.++++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~   81 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR---CISAKVDVK   81 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe---EEEEeCCCC
Confidence            778899999999999999999999999999999999997            55666666666655433   889999999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      ++++++++++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999999999999999999998777778889999999999999999999999999998878899999999888


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEee
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCV  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v  226 (275)
                      ..+.                                          ++...|++||++++.++++++.|+  .+||||+|
T Consensus       162 ~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v  199 (281)
T 3s55_A          162 HSAN------------------------------------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAV  199 (281)
T ss_dssp             GSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEE
T ss_pred             cCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            7654                                          667899999999999999999999  58999999


Q ss_pred             cCCeeecCCcC
Q 023896          227 CPGFVKTDINF  237 (275)
Q Consensus       227 ~pG~v~T~~~~  237 (275)
                      +||+|+|++..
T Consensus       200 ~PG~v~t~~~~  210 (281)
T 3s55_A          200 APGNIETPMTH  210 (281)
T ss_dssp             EECSBCSTTTS
T ss_pred             ecCcccCcccc
Confidence            99999999864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.6e-41  Score=291.70  Aligned_cols=189  Identities=28%  Similarity=0.329  Sum_probs=173.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++|++|||||++|||++++++|+++|++|+++ +|+..+++...+++...+..   +.++++|++++++++++++++.++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999997 89998888888888765433   889999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.           
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------  148 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL-----------  148 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-----------
Confidence            999999999999877777888899999999999999999999999999998888999999998877554           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                     ++...|++||++++++++.++.|+  .+||||+|+||+|+|++...
T Consensus       149 -------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  194 (258)
T 3oid_A          149 -------------------------------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKH  194 (258)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGG
T ss_pred             -------------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhh
Confidence                                           678899999999999999999999  58999999999999998654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-42  Score=297.35  Aligned_cols=192  Identities=26%  Similarity=0.273  Sum_probs=173.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~   79 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG---EAAALAGDVGDEALHEALVELA   79 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC---CEEECCCCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888888765433   3889999999999999999999


Q ss_pred             HhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~  158 (275)
                      .+++|++|+||||||+. ...++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. .+.      
T Consensus        80 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  153 (280)
T 3tox_A           80 VRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF------  153 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC------
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC------
Confidence            99999999999999976 3466778899999999999999999999999999998888999999998876 332      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       154 ------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  197 (280)
T 3tox_A          154 ------------------------------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPAN  197 (280)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTS
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchh
Confidence                                                667899999999999999999998  689999999999999986


Q ss_pred             C
Q 023896          237 F  237 (275)
Q Consensus       237 ~  237 (275)
                      .
T Consensus       198 ~  198 (280)
T 3tox_A          198 F  198 (280)
T ss_dssp             G
T ss_pred             h
Confidence            4

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-41  Score=290.59  Aligned_cols=192  Identities=24%  Similarity=0.278  Sum_probs=173.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-------------ChhHHHHHHHHHHhcCCCCCceeEEEecc
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-------------DEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl   67 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|             +.+++++..+++...+..   +.++++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv   86 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK---ALTRVLDV   86 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC---EEEEECCT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---EEEEEcCC
Confidence            56789999999999999999999999999999999998             677777777777655433   88999999


Q ss_pred             cChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecC
Q 023896           68 SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSY  146 (275)
Q Consensus        68 ~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~  146 (275)
                      +++++++++++++.+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            999999999999999999999999999998877888889999999999999999999999999998765 6899999998


Q ss_pred             ccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEE
Q 023896          147 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVN  224 (275)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn  224 (275)
                      .+..+.                                          ++...|++||++++.+++.++.|+  .+|+||
T Consensus       167 ~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn  204 (280)
T 3pgx_A          167 AGLKAT------------------------------------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVN  204 (280)
T ss_dssp             GGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            887654                                          678899999999999999999998  589999


Q ss_pred             eecCCeeecCCcC
Q 023896          225 CVCPGFVKTDINF  237 (275)
Q Consensus       225 ~v~pG~v~T~~~~  237 (275)
                      +|+||+|+|++..
T Consensus       205 ~v~PG~v~t~~~~  217 (280)
T 3pgx_A          205 SIHPYSVETPMIE  217 (280)
T ss_dssp             EEEECSBCSTTCC
T ss_pred             EEeeCcccCcccc
Confidence            9999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.4e-42  Score=293.92  Aligned_cols=189  Identities=25%  Similarity=0.291  Sum_probs=173.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +   .++.++++|++++++++++++++
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G---KKARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CceEEEEcCCCCHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999888877766   2   12888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.       
T Consensus        75 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  147 (247)
T 3rwb_A           75 QALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-------  147 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-------
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-------
Confidence            99999999999999998877788889999999999999999999999999998765 6899999998776554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++++++.++.|+  .+||||+|+||+|+|++..
T Consensus       148 -----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  192 (247)
T 3rwb_A          148 -----------------------------------PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVK  192 (247)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             -----------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccc
Confidence                                               677899999999999999999998  5899999999999998754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.4e-42  Score=297.97  Aligned_cols=193  Identities=23%  Similarity=0.257  Sum_probs=175.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++....+.  ++.++++|++++++++++++++
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999988888887652221  2889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.       
T Consensus        93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  165 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-------  165 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-------
Confidence            99999999999999998877788889999999999999999999999999998765 6899999998877654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++..
T Consensus       166 -----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  210 (266)
T 4egf_A          166 -----------------------------------PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQ  210 (266)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHH
T ss_pred             -----------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhh
Confidence                                               677899999999999999999998  5899999999999999753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.7e-41  Score=289.06  Aligned_cols=224  Identities=20%  Similarity=0.184  Sum_probs=187.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   78 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG---QILTVQMDVRNTDDIQKMIEQID   78 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999998888888765443   38899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhh-hcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.| ++.+.|+||++||..+..+.        
T Consensus        79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  150 (257)
T 3imf_A           79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG--------  150 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC--------
Confidence            999999999999998777778888999999999999999999999999999 44557899999998877654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--C-CeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P-KFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~-~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||+++++|++.++.|+  + +||||+|+||+|+|++..
T Consensus       151 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~  196 (257)
T 3imf_A          151 ----------------------------------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA  196 (257)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence                                              677899999999999999999998  2 899999999999998643


Q ss_pred             CCC------------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HAG------------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~~------------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...                  ..+|++.++.++.++.......+|..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  247 (257)
T 3imf_A          197 DKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMD  247 (257)
T ss_dssp             -------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence            210                  125555555555555443334445544443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-41  Score=294.16  Aligned_cols=193  Identities=24%  Similarity=0.337  Sum_probs=170.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++| +.+.++...+++.....  .++.++++|+++++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS--GTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS--SCEEEECCCTTCHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC--CcEEEEeCCCCCHHHHHHHHHH
Confidence            57788999999999999999999999999999999999 56677777777765432  2388999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.       
T Consensus        98 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  170 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-------  170 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-------
Confidence            9999999999999999987777888899999999999999999999999999998888999999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       171 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  215 (281)
T 3v2h_A          171 -----------------------------------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE  215 (281)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchh
Confidence                                               677899999999999999999998  5899999999999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.7e-41  Score=294.77  Aligned_cols=226  Identities=19%  Similarity=0.217  Sum_probs=191.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+....++.++++|++++++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999888888765543358899999999999999999999


Q ss_pred             hhcCCccEEEcCCcc-cccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.        
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  158 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH--------  158 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC--------
Confidence            999999999999997 44556778899999999999999999999999999998888999999998776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       159 ----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          159 ----------------------------------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             ----------------------------------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             ----------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence                                              667899999999999999999998  58999999999999998642


Q ss_pred             C-----------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          239 A-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       239 ~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      .                 ...+|+|.++.++.++.......+|..+..
T Consensus       205 ~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~v  252 (281)
T 3svt_A          205 ITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINV  252 (281)
T ss_dssp             HHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             cccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEe
Confidence            1                 123566666666665554434444554444

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-40  Score=288.12  Aligned_cols=224  Identities=20%  Similarity=0.182  Sum_probs=189.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-------------ChhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-------------DEKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|             +.++++...+.+...+..   +.++++|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~   83 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR---IVAAVVDTR   83 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---EEEEECCCC
Confidence            4678999999999999999999999999999999998             566777777777655433   889999999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYV  147 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~  147 (275)
                      ++++++++++++.+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            99999999999999999999999999998877788889999999999999999999999999998765 68999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+.                                          ++...|++||++++.+++.++.|+  .+|+||+
T Consensus       164 ~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~  201 (277)
T 3tsc_A          164 GMKMQ------------------------------------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNS  201 (277)
T ss_dssp             GTSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hCCCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            87654                                          677899999999999999999998  5899999


Q ss_pred             ecCCeeecCCcCCC-------------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          226 VCPGFVKTDINFHA-------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       226 v~pG~v~T~~~~~~-------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      |+||+|+|++....                         ...+|+|.++.+++++.......+|..+..+
T Consensus       202 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  271 (277)
T 3tsc_A          202 VHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVD  271 (277)
T ss_dssp             EEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             EEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeC
Confidence            99999999985320                         1235666666666666544444555555443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-41  Score=297.80  Aligned_cols=226  Identities=26%  Similarity=0.255  Sum_probs=192.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.  .++.++++|++++++++++++++
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA--GNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS--SCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC--CcEEEEEEeCCCHHHHHHHHHHH
Confidence            6678999999999999999999999999999999999999998888888876542  23889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  159 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||+.+. .+.       
T Consensus       114 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~-------  186 (293)
T 3rih_A          114 VDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY-------  186 (293)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC-------
Confidence            999999999999999987777888899999999999999999999999999988888999999998875 433       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.|++.++.|+  .+|+||+|+||+|+|++..
T Consensus       187 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  231 (293)
T 3rih_A          187 -----------------------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV  231 (293)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH
T ss_pred             -----------------------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh
Confidence                                               567899999999999999999998  5899999999999998753


Q ss_pred             CCC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...               ..+|++.++.++.++.......+|..+..+
T Consensus       232 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vd  279 (293)
T 3rih_A          232 DMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVD  279 (293)
T ss_dssp             HTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            211               235666666666555544444455554443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.5e-41  Score=287.82  Aligned_cols=187  Identities=27%  Similarity=0.334  Sum_probs=171.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      ++.++++|++++++++++++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP------RVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC------cceEEEccCCCHHHHHHHHHHH
Confidence            5568899999999999999999999999999999999999988877776632      3889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.        
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~--------  146 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGH--------  146 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBC--------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCC--------
Confidence            999999999999999988888888899999999999999999999999999965  4799999998887654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||++++++++.++.|+  .+||||+|+||+|+|++..
T Consensus       147 ----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  191 (255)
T 4eso_A          147 ----------------------------------PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKG  191 (255)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTT
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccc
Confidence                                              678899999999999999999999  5899999999999999864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.4e-41  Score=290.55  Aligned_cols=188  Identities=23%  Similarity=0.266  Sum_probs=171.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      ++.++++|++++++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP------AAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT------TEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC------CceEEEeeCCCHHHHHHHHHHH
Confidence            5568899999999999999999999999999999999999988887776622      2788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.       
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  149 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-------  149 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-------
Confidence            99999999999999998777888889999999999999999999999999997665 6899999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       150 -----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  193 (259)
T 4e6p_A          150 -----------------------------------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW  193 (259)
T ss_dssp             -----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH
T ss_pred             -----------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh
Confidence                                               677899999999999999999998  589999999999999975

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.6e-40  Score=284.42  Aligned_cols=225  Identities=24%  Similarity=0.274  Sum_probs=191.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecc--cChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI--SDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~   80 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++...+++......  ++.++.+|+  +++++++++++++
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR--QPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC--CCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--CceEEEEecccCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888877654332  278899999  9999999999999


Q ss_pred             HhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.       
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  159 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-------  159 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC-------
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC-------
Confidence            99999999999999985 3456778899999999999999999999999999998888999999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                         ++...|++||++++.+++.++.|+ ++||||+|+||+|+|++...
T Consensus       160 -----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~  204 (252)
T 3f1l_A          160 -----------------------------------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRAS  204 (252)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHH
T ss_pred             -----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhh
Confidence                                               677899999999999999999999 56999999999999997532


Q ss_pred             C-------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A-------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .       ...+|++.++.+++++.......+|..+..+.
T Consensus       205 ~~~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg  244 (252)
T 3f1l_A          205 AFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP  244 (252)
T ss_dssp             HCTTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred             hCCccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence            1       12456677776666665554555666665543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=8.3e-42  Score=294.72  Aligned_cols=190  Identities=24%  Similarity=0.333  Sum_probs=164.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .   ++.++++|++++++++++++++
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG---K---DVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---S---SEEEEECCTTSHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---ceEEEEeecCCHHHHHHHHHHH
Confidence            678899999999999999999999999999999999999988877766542   1   2889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------  167 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN--------  167 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC--------
Confidence            999999999999999887777778899999999999999999999999999988788999999998887654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       168 ----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  213 (266)
T 3grp_A          168 ----------------------------------PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK  213 (266)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc
Confidence                                              567899999999999999999998  58999999999999998643

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.2e-41  Score=288.81  Aligned_cols=212  Identities=14%  Similarity=0.111  Sum_probs=177.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG---RIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECcCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999999999998888877643   38899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +. +++|+||||||.....++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+..+.         
T Consensus        80 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  149 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG---------  149 (252)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC---------
T ss_pred             hh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC---------
Confidence            99 99999999999988777888899999999999999999999999999998878999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE-EeecCCeeecCCcCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV-NCVCPGFVKTDINFH  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v-n~v~pG~v~T~~~~~  238 (275)
                                                       ++...|++||+++++|++.++.|+  .+||| |+|+||+|+|++...
T Consensus       150 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~  196 (252)
T 3h7a_A          150 ---------------------------------SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE  196 (252)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred             ---------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc
Confidence                                             678899999999999999999998  58999 999999999998643


Q ss_pred             C--------------CCCChhhhhccceeecccCC
Q 023896          239 A--------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ~--------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                      .              ...+|++.++.++.++..+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          197 RREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             -----------------CCHHHHHHHHHHHHHCCG
T ss_pred             cchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCch
Confidence            2              13466666666666665444

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-41  Score=291.59  Aligned_cols=188  Identities=26%  Similarity=0.369  Sum_probs=172.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR---ALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999988888766443   88999999999999999999999


Q ss_pred             hcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +||++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.         
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---------  154 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ---------  154 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC---------
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC---------
Confidence            999999999999875 456677889999999999999999999999999998765 899999998877654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||++++++++.++.|+  .+||||+|+||+|+|++.
T Consensus       155 ---------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  198 (264)
T 3ucx_A          155 ---------------------------------AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL  198 (264)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH
T ss_pred             ---------------------------------CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH
Confidence                                             677899999999999999999998  689999999999999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-41  Score=292.95  Aligned_cols=193  Identities=26%  Similarity=0.397  Sum_probs=162.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++| +.++++...+++...+..   +.++++|+++++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR---VIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCC---EEEEECCTTSGGGHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999995 777778887777765433   88999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcc--cccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCc
Q 023896           80 IKTQFGKLDILTKGDAE--VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~  154 (275)
                      +.+++|++|+||||||.  ....++.+.+.++|++.+++|+.++++++++++|.|++++   .|+||++||..+..+.  
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--  178 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS--  178 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--
Confidence            99999999999999998  4456677889999999999999999999999999998654   6799999998887654  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++.+++.++.++  .+|+||+|+||+|+
T Consensus       179 ----------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  218 (280)
T 4da9_A          179 ----------------------------------------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR  218 (280)
T ss_dssp             -----------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             ----------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCc
Confidence                                                    667899999999999999999998  58999999999999


Q ss_pred             cCCcCC
Q 023896          233 TDINFH  238 (275)
Q Consensus       233 T~~~~~  238 (275)
                      |++...
T Consensus       219 T~~~~~  224 (280)
T 4da9_A          219 SDMTAA  224 (280)
T ss_dssp             C-----
T ss_pred             CCchhh
Confidence            998643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.2e-40  Score=286.64  Aligned_cols=191  Identities=21%  Similarity=0.236  Sum_probs=170.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC----------------hhHHHHHHHHHHhcCCCCCceeEEEe
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD----------------EKRGLEAVEKLKASGVDPELLLFHQL   65 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~   65 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+                .+++++..+++...+.   ++.++++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   83 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR---RIVTAEV   83 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC---CEEEEEC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC---ceEEEEc
Confidence            45789999999999999999999999999999999987                5666666666665443   3889999


Q ss_pred             cccChHHHHHHHHHHHhhcCCccEEEcCCcccccch-hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEE
Q 023896           66 DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNL  143 (275)
Q Consensus        66 Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~v  143 (275)
                      |++++++++++++++.+++|+||+||||||+..... +.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            999999999999999999999999999999876654 77789999999999999999999999999998755 6899999


Q ss_pred             ecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCe
Q 023896          144 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  221 (275)
Q Consensus       144 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i  221 (275)
                      ||..+..+.                                          ++...|++||+++++|+++++.|+  .+|
T Consensus       164 sS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI  201 (286)
T 3uve_A          164 SSVGGLKAY------------------------------------------PHTGHYVAAKHGVVGLMRAFGVELGQHMI  201 (286)
T ss_dssp             CCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             CchhhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCe
Confidence            998887654                                          678899999999999999999998  589


Q ss_pred             EEEeecCCeeecCCcC
Q 023896          222 CVNCVCPGFVKTDINF  237 (275)
Q Consensus       222 ~vn~v~pG~v~T~~~~  237 (275)
                      |||+|+||+|+|++..
T Consensus       202 ~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          202 RVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             EEEEEEESSBSSTTTS
T ss_pred             EEEEEecCcccCCccc
Confidence            9999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.7e-41  Score=291.96  Aligned_cols=225  Identities=24%  Similarity=0.285  Sum_probs=192.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||++|||++++++|+++|++|++++| +....+...+++...+..   +.++++|++++++++++++++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE---AFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999998 666777777777665433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.        
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  172 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN--------  172 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC--------
Confidence            999999999999999987777778899999999999999999999999999988788999999998776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++...
T Consensus       173 ----------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          173 ----------------------------------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc
Confidence                                              667899999999999999999998  58999999999999998642


Q ss_pred             C------------CCCChhhhhccceeecccCC-CCCcceEeccCc
Q 023896          239 A------------GILSVEEGAESPVKLALLPD-GGPTGRFFLRKE  271 (275)
Q Consensus       239 ~------------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~  271 (275)
                      .            ...+|+|.++.++.++..+. ...+|..+..+.
T Consensus       219 ~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          219 LAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             HHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             ccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence            1            13467777777777666532 345566665544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.4e-41  Score=286.78  Aligned_cols=190  Identities=28%  Similarity=0.382  Sum_probs=171.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+|++|||||++|||++++++|+++|++|++++| +.++.+...+++...+..   +.++++|++++++++++++++.+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD---SFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999887 556777777777765433   88999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.          
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  148 (246)
T 3osu_A           79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN----------  148 (246)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------
Confidence            9999999999999887777778899999999999999999999999999988788999999998776554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++...
T Consensus       149 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (246)
T 3osu_A          149 --------------------------------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA  194 (246)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC
T ss_pred             --------------------------------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc
Confidence                                            677899999999999999999998  58999999999999998653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.8e-41  Score=290.84  Aligned_cols=213  Identities=22%  Similarity=0.256  Sum_probs=177.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++++|++++++++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTTSHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHH
Confidence            566789999999999999999999999999999999999998888777763      12888999999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHH
Q 023896           81 KTQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      .+++|++|+||||||.... .++.+.+.++|++.+++|+.|+++++++++|.|++++  .|+||++||+.+..+.     
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----  171 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-----  171 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-----
Confidence            9999999999999998654 5677889999999999999999999999999998765  6899999999887654     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           ++...|++||++++++++.++.|+  .+|+||+|+||+|+|++
T Consensus       172 -------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (272)
T 4dyv_A          172 -------------------------------------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM  214 (272)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred             -------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence                                                 677899999999999999999998  58999999999999998


Q ss_pred             cCCC--------------CCCChhhhhccceeecccCCCC
Q 023896          236 NFHA--------------GILSVEEGAESPVKLALLPDGG  261 (275)
Q Consensus       236 ~~~~--------------~~~~~~~~a~~~~~~~~~~~~~  261 (275)
                      ....              ...+|+|.++.++.++..+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          215 AQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ---------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             hhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence            6432              1346777777777777766544

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6e-41  Score=288.14  Aligned_cols=223  Identities=25%  Similarity=0.277  Sum_probs=180.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||++|||++++++|+++|++|+++ .|+.+..+...+++...+..   +.++++|+++++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---ALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSC---CEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHH
Confidence            456889999999999999999999999999999998 56777777777777655433   88899999999999999999


Q ss_pred             HHhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHH
Q 023896           80 IKTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKA  157 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~  157 (275)
                      +.+++|++|+||||||.. ...++.+.+.++|++.+++|+.|+++++++++|.|++  .|+||++||..+. .+.     
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~-----  152 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGG-----  152 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCS-----
T ss_pred             HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCC-----
Confidence            999999999999999976 5566778899999999999999999999999999975  5799999997765 332     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                                                           ++...|++||++++.+++.++.|+ ++||||+|+||+|+|++.
T Consensus       153 -------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~  195 (259)
T 3edm_A          153 -------------------------------------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFH  195 (259)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---
T ss_pred             -------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccc
Confidence                                                 667899999999999999999998 669999999999999986


Q ss_pred             CCCC----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 FHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ....                ..+|++.++.++.++.......+|..+..+
T Consensus       196 ~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vd  245 (259)
T 3edm_A          196 DTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDIN  245 (259)
T ss_dssp             -------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            4321                124556665555555443344455555443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-40  Score=288.31  Aligned_cols=225  Identities=26%  Similarity=0.309  Sum_probs=194.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...+..   +..+++|+++.++++++++++.
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE---GRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC---CEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEEeCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888888765433   7889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.         
T Consensus       101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  171 (270)
T 3ftp_A          101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN---------  171 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------
Confidence            99999999999999887777778899999999999999999999999999988788999999998776554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.|++.++.|+  .+|+||+|+||+|+|++....
T Consensus       172 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          172 ---------------------------------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence                                             678899999999999999999998  589999999999999975321


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...+|++.++.++.++.......+|..+..+.
T Consensus       219 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          219 PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence                           12367777777776665444556666665544

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=7.1e-40  Score=287.13  Aligned_cols=191  Identities=23%  Similarity=0.263  Sum_probs=171.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC------------hhHHHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+            .++++...+++...+..   +.++++|+++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~  100 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR---IIASQVDVRD  100 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTTC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc---eEEEECCCCC
Confidence            35789999999999999999999999999999999987            66677777777665433   8899999999


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCcccccch-hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCc
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYV  147 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~  147 (275)
                      +++++++++++.+++|+||+||||||...... +.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            99999999999999999999999999876654 67889999999999999999999999999987654 68999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+.                                          ++...|++||+++++|+++++.|+  .+|+||+
T Consensus       181 ~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  218 (299)
T 3t7c_A          181 GLRGA------------------------------------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNI  218 (299)
T ss_dssp             GTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            87654                                          678899999999999999999998  5899999


Q ss_pred             ecCCeeecCCcC
Q 023896          226 VCPGFVKTDINF  237 (275)
Q Consensus       226 v~pG~v~T~~~~  237 (275)
                      |+||+|+|++..
T Consensus       219 v~PG~v~T~~~~  230 (299)
T 3t7c_A          219 VCPSSVATPMLL  230 (299)
T ss_dssp             EEESCBSSTTTS
T ss_pred             EecCCccCcccc
Confidence            999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.3e-41  Score=291.85  Aligned_cols=222  Identities=22%  Similarity=0.268  Sum_probs=187.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++++|++++++++++++++.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG------SKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999988877766642      128889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.         
T Consensus        97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  167 (277)
T 4dqx_A           97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI---------  167 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC---------
Confidence            99999999999999887777778899999999999999999999999999998888999999998877654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++++++.++.|+  .+|+||+|+||+|+|++....
T Consensus       168 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  214 (277)
T 4dqx_A          168 ---------------------------------ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI  214 (277)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             ---------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh
Confidence                                             678899999999999999999998  589999999999999972110


Q ss_pred             ---------------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                           ...+|++.++.++.++.......+|..+..+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  267 (277)
T 4dqx_A          215 FAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG  267 (277)
T ss_dssp             HHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence                                 12256666666665555444444555554443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-40  Score=286.13  Aligned_cols=190  Identities=25%  Similarity=0.276  Sum_probs=168.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||++|||++++++|+++|++|++++++ .++.+...+++...+..   +.++++|++++++++++++++.
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR---AVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999665 45677777777665433   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|++  .|+||++||..+..+          
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~----------  172 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELV----------  172 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCC----------
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccC----------
Confidence            99999999999999987778888899999999999999999999999999964  589999999766543          


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                     +.++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       173 -------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          173 -------------------------------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             -------------------------------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred             -------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence                                           12667899999999999999999998  58999999999999998754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.9e-41  Score=292.85  Aligned_cols=190  Identities=22%  Similarity=0.260  Sum_probs=172.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++....+.  ++.++++|++++++++++++++.
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR--RCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888777543222  38899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.         
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  171 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ---------  171 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC---------
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------
Confidence            99999999999999877777778899999999999999999999999999987777999999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                       ++...|++||++++++++.++.|+  .+||||+|+||+|+|++
T Consensus       172 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  214 (277)
T 4fc7_A          172 ---------------------------------ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE  214 (277)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred             ---------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence                                             667899999999999999999998  58999999999999985

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.2e-41  Score=291.91  Aligned_cols=213  Identities=21%  Similarity=0.257  Sum_probs=178.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..  .+.++++|++++++++++++++.+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN--IVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC--eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999999988888887654333  258899999999999999999999


Q ss_pred             hcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHHHh
Q 023896           83 QFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ++|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++  .|+||++||+.+..+.       
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------  180 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-------  180 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-------
Confidence            99999999999998644 5677889999999999999999999999999998765  6899999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||+++++++++++.|+  .+|+||+|+||+|+|++..
T Consensus       181 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  225 (281)
T 4dry_A          181 -----------------------------------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA  225 (281)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred             -----------------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence                                               678899999999999999999998  5899999999999999864


Q ss_pred             CC--------------CCCChhhhhccceeecccCC
Q 023896          238 HA--------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       238 ~~--------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ..              ...+|+|.++.+++++..+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          226 RMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             ---CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             hhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCc
Confidence            32              13466666666666665544

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=4.2e-41  Score=292.19  Aligned_cols=188  Identities=27%  Similarity=0.351  Sum_probs=171.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---VDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999888888765433   889999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh--hhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP--LLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|  .|++++.|+||++||..+..+.         
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~---------  169 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV---------  169 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---------
Confidence            99999999999998777788889999999999999999999999999  6777777999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||++++++++.++.|+  .+|+||+|+||+|+|++.
T Consensus       170 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  213 (279)
T 3sju_A          170 ---------------------------------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA  213 (279)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH
T ss_pred             ---------------------------------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHH
Confidence                                             677899999999999999999998  589999999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.9e-41  Score=292.13  Aligned_cols=187  Identities=27%  Similarity=0.314  Sum_probs=171.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   +   .++.++++|++++++++++++++.
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G---CGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888877766   1   127889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||+.+..+.         
T Consensus        99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------  169 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV---------  169 (277)
T ss_dssp             HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------
Confidence            99999999999999988777888899999999999999999999999999998888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       170 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  213 (277)
T 3gvc_A          170 ---------------------------------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ  213 (277)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH
Confidence                                             678899999999999999999998  589999999999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.5e-41  Score=291.44  Aligned_cols=228  Identities=21%  Similarity=0.197  Sum_probs=190.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|+++.++++++++++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGT---AQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCC---EEEEECCTTSTTHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe---EEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888888765443   8899999999999999999998


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +. +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.         
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------  175 (275)
T 4imr_A          106 AI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK---------  175 (275)
T ss_dssp             HH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC---------
Confidence            87 99999999999887777888899999999999999999999999999988788999999998876543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       176 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  222 (275)
T 4imr_A          176 ---------------------------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR  222 (275)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             ---------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc
Confidence                                             556779999999999999999998  589999999999999975321


Q ss_pred             CCCChhhh----hcc-ceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILSVEEG----AES-PVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~~~~~----a~~-~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ....++..    ... ++.+..+|++.+....|++++.++|
T Consensus       223 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~  263 (275)
T 4imr_A          223 RAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSF  263 (275)
T ss_dssp             HHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             cccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCC
Confidence            10011110    111 4555666666666666666666544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.6e-39  Score=279.52  Aligned_cols=224  Identities=24%  Similarity=0.267  Sum_probs=190.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...+..   +.++++|+++++++.++++++
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---AESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCc---eeEEEecCCCHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999999998888888765433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcc-cccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.+|++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.       
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  173 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-------  173 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-------
T ss_pred             HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-------
Confidence            9999999999999998 44456677899999999999999999999999999998888999999999887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       174 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~  218 (262)
T 3rkr_A          174 -----------------------------------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV  218 (262)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc
Confidence                                               677899999999999999999998  5899999999999999864


Q ss_pred             CC-------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          238 HA-------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       238 ~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ..       ...+|++.++.++.++..+.....+..++.
T Consensus       219 ~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~  257 (262)
T 3rkr_A          219 GLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLVR  257 (262)
T ss_dssp             ----------CCCHHHHHHHHHHHHTCCTTCCEEEEEEE
T ss_pred             ccccccccccCCCHHHHHHHHHHHhcCccccccCcEEec
Confidence            32       246888999888887776665555555543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.2e-40  Score=282.28  Aligned_cols=214  Identities=20%  Similarity=0.277  Sum_probs=182.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++........++.++++|++++++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999988888876533223488999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++|++|+||||||.....++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.          
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  152 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------  152 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC----------
Confidence            99999999999998766666 6788999999999999999999999999988788999999998877543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|++||++++++++.++.++  .+||||+|+||+|+|++.... 
T Consensus       153 --------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  200 (250)
T 3nyw_A          153 --------------------------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG  200 (250)
T ss_dssp             --------------------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT
T ss_pred             --------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC
Confidence                                            447899999999999999999998  589999999999999986422 


Q ss_pred             ------CCCChhhhhccceeecccCC
Q 023896          240 ------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ------~~~~~~~~a~~~~~~~~~~~  259 (275)
                            ...+|++.++.++.++..+.
T Consensus       201 ~~~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          201 TPFKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             CCSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             CCcccccCCCHHHHHHHHHHHHcCCC
Confidence                  13578888888887776554

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-40  Score=287.08  Aligned_cols=222  Identities=27%  Similarity=0.337  Sum_probs=178.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||++|||++++++|+++|++|+++ .|+.+..+...+++...+..   +.++++|++++++++++++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---ALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHH
Confidence            34579999999999999999999999999999988 55666777777777665443   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.        
T Consensus       100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~--------  169 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLH--------  169 (267)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCC--------
Confidence            999999999999999988778888899999999999999999999999999965  4799999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       170 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          170 ----------------------------------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence                                              667899999999999999999999  58999999999999998643


Q ss_pred             CC----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 AG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                ..+|++.++.++.++.......+|+.+..+
T Consensus       216 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  263 (267)
T 3u5t_A          216 GKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN  263 (267)
T ss_dssp             -----CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEES
T ss_pred             cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence            11                224555565555555443344455555443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-39  Score=277.61  Aligned_cols=225  Identities=25%  Similarity=0.269  Sum_probs=196.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...+..   +.++++|++++++++++++++.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   77 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK---ARGLVLNISDIESIQNFFAEIK   77 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999988888888766433   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.         
T Consensus        78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  148 (247)
T 3lyl_A           78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN---------  148 (247)
T ss_dssp             HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---------
Confidence            99999999999999987777778899999999999999999999999999988788999999998876554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       149 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          149 ---------------------------------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred             ---------------------------------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence                                             677899999999999999999998  689999999999999986542


Q ss_pred             C---------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 G---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .               ..+|++.++.++.++.......+|..+..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          196 TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            1               2367777777776665554555666665543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-40  Score=287.90  Aligned_cols=221  Identities=32%  Similarity=0.351  Sum_probs=186.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   +.   ++.++++|++++++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GR---GAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CT---TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC---CeEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999888877766   21   27889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +++|++|+||||||...  ...+.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.       
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  153 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-------  153 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-------
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-------
Confidence            99999999999999863  344667899999999999999999999999999998888999999998887654       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.++++++.|+  .+|+||+|+||+|+|++..
T Consensus       154 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          154 -----------------------------------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             -----------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             -----------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence                                               677899999999999999999998  5899999999999999865


Q ss_pred             CC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                ...+|++.++.+++++.......+|..+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  247 (271)
T 3tzq_B          199 VGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAAD  247 (271)
T ss_dssp             ---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEEC
Confidence            21                1225666666666555544444455555443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.2e-40  Score=286.27  Aligned_cols=227  Identities=27%  Similarity=0.321  Sum_probs=184.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|++|||||++|||++++++|+++|++|+++++ +.+..+...+++...+..   +.++++|++++++++++++++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD---AIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999876 455677777777765433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc-ccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~~~  159 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+ ..+.       
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~-------  161 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSV-------  161 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCC-------
Confidence            999999999999999988778888899999999999999999999999999965  589999999773 3332       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++++++.++.|+  .+||||+|+||+|+|++..
T Consensus       162 -----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  206 (270)
T 3is3_A          162 -----------------------------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFH  206 (270)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHH
T ss_pred             -----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence                                               667899999999999999999998  5899999999999999864


Q ss_pred             CCC--------CCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAG--------ILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~--------~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ...        ...+++.     ...++++...|++.+....|+.++.++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  257 (270)
T 3is3_A          207 EVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEW  257 (270)
T ss_dssp             HHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCC
Confidence            110        0111111     1234555555556666666666655543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.7e-40  Score=284.80  Aligned_cols=225  Identities=20%  Similarity=0.207  Sum_probs=188.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-------HHHHHHHHHhcCCCCCceeEEEecccChHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~   74 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+       ++...+++...+.   ++.++++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG---QGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTS---EEEEEECCTTCHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCC---eEEEEeCCCCCHHHHH
Confidence            57899999999999999999999999999999999998753       4555555555433   3889999999999999


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++++++.+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.. 
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  157 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-  157 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-
Confidence            9999999999999999999999877777788999999999999999999999999999988889999999988764310 


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCC-ee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPG-FV  231 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG-~v  231 (275)
                                                             .++...|++||++++++++.++.|+  .+||||+|+|| ++
T Consensus       158 ---------------------------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v  198 (274)
T 3e03_A          158 ---------------------------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI  198 (274)
T ss_dssp             ---------------------------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred             ---------------------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence                                                   0346789999999999999999998  58999999999 68


Q ss_pred             ecCCcCCCC------CCChhhhhccceeecccCCCCCcceEecc
Q 023896          232 KTDINFHAG------ILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       232 ~T~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      +|++.....      ..+|++.++.++.++.......+|+++..
T Consensus       199 ~T~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          199 ATDAINMLPGVDAAACRRPEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             CC-------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             ccchhhhcccccccccCCHHHHHHHHHHHhCccccccCCeEEEc
Confidence            999864322      34788888888887776666677777643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-39  Score=276.12  Aligned_cols=207  Identities=15%  Similarity=0.136  Sum_probs=176.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      .+.++++|++++++++++++++.+.
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~   74 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGIVADLAHHEDVDVAFAAAVEW   74 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CceEEECCCCCHHHHHHHHHHHHHh
Confidence            3579999999999999999999999999999999999988887777632      2889999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++ ++||++||..+..+.           
T Consensus        75 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~-----------  142 (235)
T 3l6e_A           75 GGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK-----------  142 (235)
T ss_dssp             HCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC-----------
T ss_pred             cCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC-----------
Confidence            99999999999997777777889999999999999999999999999998765 599999998887664           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC--
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                     ++...|++||+++++++++++.|+  .+||||+|+||+|+|++....  
T Consensus       143 -------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~  191 (235)
T 3l6e_A          143 -------------------------------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH  191 (235)
T ss_dssp             -------------------------------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------
T ss_pred             -------------------------------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC
Confidence                                           667899999999999999999998  589999999999999986432  


Q ss_pred             ----CCCChhhhhccceeecccCC
Q 023896          240 ----GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ----~~~~~~~~a~~~~~~~~~~~  259 (275)
                          ...+|++.++.+++++..+.
T Consensus       192 ~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          192 VDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             -----CBCHHHHHHHHHHHTCCCS
T ss_pred             CCCcCCCCHHHHHHHHHHHHhCCC
Confidence                24688888888888776444

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-40  Score=284.56  Aligned_cols=229  Identities=21%  Similarity=0.241  Sum_probs=194.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   79 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSYVCDVTSEEAVIGTVDSVV   79 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888888777765433   38889999999999999999999


Q ss_pred             hhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.        
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  151 (262)
T 1zem_A           80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--------  151 (262)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC--------
T ss_pred             HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC--------
Confidence            9999999999999987 5566778899999999999999999999999999987777899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+||||+|+||+|+|++...
T Consensus       152 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          152 ----------------------------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence                                              567899999999999999999998  58999999999999998532


Q ss_pred             C----------CCC--Chh-h----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 A----------GIL--SVE-E----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~----------~~~--~~~-~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .          ...  .++ .    ....++++..+|++.+....|+.++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  251 (262)
T 1zem_A          198 RQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSF  251 (262)
T ss_dssp             HHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             hccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            1          001  122 1    12346677788888888888888877654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1e-40  Score=287.17  Aligned_cols=190  Identities=21%  Similarity=0.260  Sum_probs=163.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh---hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.   +++++..+++...+.   ++.++++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA---KVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC---EEEEEECCCCSHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHH
Confidence            4677899999999999999999999999999999987754   456666666665433   3889999999999999999


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      +++.+++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|+  +.|+||++||..+..+.     
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~-----  155 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYT-----  155 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHH-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCC-----
Confidence            99999999999999999998877788889999999999999999999999999994  35899999998766443     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           ++...|++||+++++|++.++.|+  .+||||+|+||+|+|++
T Consensus       156 -------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (262)
T 3ksu_A          156 -------------------------------------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF  198 (262)
T ss_dssp             -------------------------------------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred             -------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence                                                 567789999999999999999999  58999999999999998


Q ss_pred             cC
Q 023896          236 NF  237 (275)
Q Consensus       236 ~~  237 (275)
                      ..
T Consensus       199 ~~  200 (262)
T 3ksu_A          199 FY  200 (262)
T ss_dssp             HH
T ss_pred             cc
Confidence            53

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-40  Score=287.47  Aligned_cols=224  Identities=22%  Similarity=0.276  Sum_probs=190.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++|++|||||++|||++++++|+++|+   +|++++|+.+++++..+++...... .++.++++|++++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-AKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-CEEEEEECCTTCGGGHHHHHH
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHH
Confidence            456899999999999999999999999998   9999999999999888888764321 238899999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      ++.+++|+||+||||||... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||+.+..+.     
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----  182 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY-----  182 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC-----
Confidence            99999999999999999765 456677899999999999999999999999999988888999999998887654     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           ++...|++||++++.|++.++.|+  .+|+||+|+||+|+|++
T Consensus       183 -------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          183 -------------------------------------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             -------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence                                                 678899999999999999999998  68999999999999997


Q ss_pred             cCC---------------CCCCChhhhhccceeecccCCCCCcceEec
Q 023896          236 NFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  268 (275)
Q Consensus       236 ~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~  268 (275)
                      ...               ..+++|+|.++.++.++..+.....|..+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~  273 (287)
T 3rku_A          226 SLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLI  273 (287)
T ss_dssp             HHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEE
T ss_pred             ccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEE
Confidence            421               123466777777777666555444444433

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.6e-39  Score=287.23  Aligned_cols=191  Identities=27%  Similarity=0.348  Sum_probs=171.9

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC------------hhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+            .++++...+++...+..   +.++++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~  117 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR---IIARQADVR  117 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe---EEEEECCCC
Confidence            667889999999999999999999999999999999886            56666666666655433   889999999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYV  147 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~  147 (275)
                      ++++++++++++.+++|+||+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||+.
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            99999999999999999999999999998877777889999999999999999999999999998765 68999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+.                                          ++...|++||++++.|++.++.|+  .+|+||+
T Consensus       198 ~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  235 (317)
T 3oec_A          198 GLRGA------------------------------------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS  235 (317)
T ss_dssp             GSSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            87654                                          678899999999999999999998  5899999


Q ss_pred             ecCCeeecCCc
Q 023896          226 VCPGFVKTDIN  236 (275)
Q Consensus       226 v~pG~v~T~~~  236 (275)
                      |+||+|+|++.
T Consensus       236 v~PG~v~T~~~  246 (317)
T 3oec_A          236 VNPGAVNTEMA  246 (317)
T ss_dssp             EEECSBSSHHH
T ss_pred             EecCcccCccc
Confidence            99999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-40  Score=286.06  Aligned_cols=226  Identities=22%  Similarity=0.219  Sum_probs=181.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+. ..++..+++...+.   ++.++++|+++.++++++.+ ..
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~-~~  101 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGG---SAEAVVADLADLEGAANVAE-EL  101 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTC---EEEEEECCTTCHHHHHHHHH-HH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHH-HH
Confidence            467899999999999999999999999999999999764 45566666655433   38899999999999999954 55


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.         
T Consensus       102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---------  172 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG---------  172 (273)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC---------
Confidence            66799999999999988778888899999999999999999999999999988888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++....
T Consensus       173 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  219 (273)
T 3uf0_A          173 ---------------------------------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL  219 (273)
T ss_dssp             ---------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             ---------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence                                             677899999999999999999998  589999999999999986422


Q ss_pred             CCC---ChhhhhccceeecccCCCCCcceEeccCcccC
Q 023896          240 GIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  274 (275)
Q Consensus       240 ~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~  274 (275)
                      ...   ........++++...|++.+....|+.++.++
T Consensus       220 ~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~  257 (273)
T 3uf0_A          220 RADDERAAEITARIPAGRWATPEDMVGPAVFLASDAAS  257 (273)
T ss_dssp             HTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            100   00001223444445555555555555555443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.2e-39  Score=277.29  Aligned_cols=227  Identities=21%  Similarity=0.143  Sum_probs=192.9

Q ss_pred             CcccCCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~-~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||+ +|||++++++|+++|++|++++|+.++++...+++......  ++.++++|+++.+++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG--RVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS--CEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC--ceEEEEeCCCCHHHHHHHHHH
Confidence            456789999999998 59999999999999999999999999998888888665432  389999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|+++ +.++||++||..+..+.      
T Consensus        95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  168 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ------  168 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC------
T ss_pred             HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC------
Confidence            99999999999999998877777788999999999999999999999999999876 56899999998877654      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       169 ------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (266)
T 3o38_A          169 ------------------------------------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFL  212 (266)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---
T ss_pred             ------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhh
Confidence                                                677899999999999999999998  589999999999999985


Q ss_pred             CCC----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          237 FHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       237 ~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ...                ...+|+|.++.++.++.......+|..+..+.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          213 EKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             --------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             hccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence            432                12467787877777666555556676665554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.9e-39  Score=275.75  Aligned_cols=189  Identities=25%  Similarity=0.304  Sum_probs=172.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~   80 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA---KVHVLELDVADRQGVDAAVASTVE   80 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888887765433   388899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.          
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  149 (247)
T 2jah_A           81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV----------  149 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC----------
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC----------
Confidence            999999999999987766777889999999999999999999999999998766 999999998877554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                      ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       150 --------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  194 (247)
T 2jah_A          150 --------------------------------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRG  194 (247)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG
T ss_pred             --------------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchh
Confidence                                            667899999999999999999998  5899999999999999864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-40  Score=283.40  Aligned_cols=192  Identities=20%  Similarity=0.193  Sum_probs=171.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++..... ..++.++++|++++++++++++++.
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888887777765411 1238889999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  159 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------  159 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC--------
Confidence            999999999999998765 66777899999999999999999999999999987777999999998877554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       160 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  203 (267)
T 1iy8_A          160 ----------------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV  203 (267)
T ss_dssp             ----------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             ----------------------------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence                                              667899999999999999999998  589999999999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.9e-40  Score=278.92  Aligned_cols=223  Identities=24%  Similarity=0.298  Sum_probs=186.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||++|||++++++|+++|++|++++| +.++++...+++...+..   +.++++|++++++++++++++.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   77 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD---AIAVRADVANAEDVTNMVKQTV   77 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999 888887777777654332   8889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.         
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  148 (246)
T 2uvd_A           78 DVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------  148 (246)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------
Confidence            99999999999999877777778899999999999999999999999999987777899999998776543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+++|++....
T Consensus       149 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  195 (246)
T 2uvd_A          149 ---------------------------------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL  195 (246)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC
T ss_pred             ---------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc
Confidence                                             567899999999999999999998  589999999999999986432


Q ss_pred             C---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 G---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .               ..+|++.++.++.++.......+|..+..+
T Consensus       196 ~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vd  241 (246)
T 2uvd_A          196 DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVD  241 (246)
T ss_dssp             CTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEEC
Confidence            1               235566666665555433333445554443

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-39  Score=274.76  Aligned_cols=221  Identities=24%  Similarity=0.282  Sum_probs=183.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecc--cChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI--SDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~   79 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...+...  ..++.+|+  ++.+++++++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQ--PLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCC--CEEEECCTTTCCHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCC--ceEEEeccccCCHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999888887765333  56666666  999999999999


Q ss_pred             HHhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.      
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------  161 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR------  161 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC------
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC------
Confidence            999999999999999975 4456778899999999999999999999999999988888999999998877654      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCeeecCC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v~T~~  235 (275)
                                                          ++...|+++|++++.+++.++.++   ++||||+|+||+|+|++
T Consensus       162 ------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          162 ------------------------------------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             ------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence                                                677899999999999999999997   58999999999999998


Q ss_pred             cCCC-------CCCChhhhhccceeecccCCCCCcceE
Q 023896          236 NFHA-------GILSVEEGAESPVKLALLPDGGPTGRF  266 (275)
Q Consensus       236 ~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~  266 (275)
                      ....       ...+|++.++.++.++.......+|+.
T Consensus       206 ~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~  243 (247)
T 3i1j_A          206 RAQAYPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQA  243 (247)
T ss_dssp             HHHHSTTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCE
T ss_pred             chhcccccCccCCCCHHHHHHHHHHHhCchhccccCee
Confidence            5321       123445555544444433333334433

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.6e-39  Score=284.30  Aligned_cols=227  Identities=24%  Similarity=0.291  Sum_probs=183.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.  ...+...+.+...+..   +.++++|+++++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK---AVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC---EEECCCCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999873  3445555555544433   88999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.+++|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.      
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~------  193 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPS------  193 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCC------
Confidence            9999999999999999854 456778899999999999999999999999999964  4899999998887654      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||+++++|++.++.|+  .+|+||+|+||+|+|++.
T Consensus       194 ------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  237 (294)
T 3r3s_A          194 ------------------------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             ------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence                                                678899999999999999999998  589999999999999973


Q ss_pred             CCCC---CCChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          237 FHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       237 ~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ....   ..........++++...|++.+....|+.++.++|
T Consensus       238 ~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  279 (294)
T 3r3s_A          238 ISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_dssp             HTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             cccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            2111   01111122345555566666666666666665543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.1e-39  Score=281.77  Aligned_cols=225  Identities=20%  Similarity=0.194  Sum_probs=183.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   +   .++.++++|++++++++++++++.
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~~~~~~   74 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---G---GNAVGVVGDVRSLQDQKRAAERCL   74 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---B---TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---C---CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998877665543   1   238899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccc-hhh----ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           82 TQFGKLDILTKGDAEVDWS-KVC----YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~-~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++++++|+||||||+.... .+.    +.+.+.|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.    
T Consensus        75 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----  149 (281)
T 3zv4_A           75 AAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPN----  149 (281)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSS----
T ss_pred             HhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCC----
Confidence            9999999999999975432 121    344578999999999999999999999998654 899999998887654    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~  235 (275)
                                                            ++...|++||+++++++++++.|+ ++||||+|+||+|+|++
T Consensus       150 --------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          150 --------------------------------------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             --------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             --------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence                                                  667889999999999999999998 66999999999999998


Q ss_pred             cCCCCCC---------Ch--hhhhccceeecccCCCCCcceEeccC-cccCC
Q 023896          236 NFHAGIL---------SV--EEGAESPVKLALLPDGGPTGRFFLRK-EEAPF  275 (275)
Q Consensus       236 ~~~~~~~---------~~--~~~a~~~~~~~~~~~~~~~~~~~~~~-~~a~~  275 (275)
                      .......         ..  ......++++..+|++.+....|+++ +.++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~  243 (281)
T 3zv4_A          192 RGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLP  243 (281)
T ss_dssp             CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTT
T ss_pred             ccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccccccc
Confidence            6432110         00  11123567777778888888888877 55543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.1e-39  Score=279.66  Aligned_cols=227  Identities=19%  Similarity=0.210  Sum_probs=187.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...... ..+..+.+|+++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~----   80 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD-AILQPVVADLGTEQGCQDVI----   80 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT-CEEEEEECCTTSHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEecCCCCHHHHHHHH----
Confidence            4678999999999999999999999999999999999999998888888765422 23778899999999877665    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  151 (267)
T 3t4x_A           81 EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS---------  151 (267)
T ss_dssp             HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC---------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC---------
Confidence            45799999999999987777888899999999999999999999999999998888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.|+  .+||||+|+||+++|++....
T Consensus       152 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  198 (267)
T 3t4x_A          152 ---------------------------------QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM  198 (267)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHH
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHH
Confidence                                             678899999999999999999998  589999999999999864211


Q ss_pred             -------CCCChhhhh---------ccceeecccCCCCCcceEeccCcccCC
Q 023896          240 -------GILSVEEGA---------ESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 -------~~~~~~~~a---------~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                             ...++++..         ..+++++..|++.+....|+.++.++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~  250 (267)
T 3t4x_A          199 LNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSA  250 (267)
T ss_dssp             HHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             HhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccC
Confidence                   112222221         123556666666777777776666554

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=282.37  Aligned_cols=190  Identities=28%  Similarity=0.321  Sum_probs=168.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888887777655432   88899999999999999999999


Q ss_pred             hc-CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .| +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  165 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------  165 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC---------
Confidence            99 99999999999877777778899999999999999999999999999987777899999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       166 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  210 (273)
T 1ae1_A          166 ---------------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE  210 (273)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             ---------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhh
Confidence                                             667899999999999999999998  5899999999999999854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.8e-39  Score=282.67  Aligned_cols=224  Identities=20%  Similarity=0.218  Sum_probs=191.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-------HHHHHHHHHHhcCCCCCceeEEEecccChHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-------RGLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~   74 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+       .+++..+++...+.   ++.++++|++++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG---QALPIVGDIRDGDAVA   81 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS---EEEEEECCTTSHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHH
Confidence            4678999999999999999999999999999999999986       45666666665543   3889999999999999


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++++++.+++|++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.  
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--  159 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK--  159 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC--
Confidence            999999999999999999999988777888899999999999999999999999999998888999999998876542  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCC-ee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPG-FV  231 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG-~v  231 (275)
                                                             .++...|++||+++++++++++.|+  .+||||+|+|| ++
T Consensus       160 ---------------------------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v  200 (285)
T 3sc4_A          160 ---------------------------------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTV  200 (285)
T ss_dssp             ---------------------------------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCB
T ss_pred             ---------------------------------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcc
Confidence                                                   0346889999999999999999999  58999999999 68


Q ss_pred             ecCCcCC--------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          232 KTDINFH--------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       232 ~T~~~~~--------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +|++...        ....+|++.++.++.++..+. ..+|..+..+
T Consensus       201 ~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~d  246 (285)
T 3sc4_A          201 ATAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCE  246 (285)
T ss_dssp             CCHHHHHHHTSCCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHH
T ss_pred             ccHHHHhhccccccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEc
Confidence            9987432        123578888888888777665 5666666543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-39  Score=277.51  Aligned_cols=221  Identities=20%  Similarity=0.207  Sum_probs=174.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.++.+...+++.      .++.++++|++++++++++++++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~   75 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG------AAVRFRNADVTNEADATAALAFA   75 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999988777666552      12888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhh----ccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------CCCeEEEEecCcccc
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVC----YQTYELAVECLKTNYYGTKQTCEALIPLLELS------DSPRLVNLSSYVSAL  150 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~~~~  150 (275)
                      .+++|++|+||||||......+.    +.+.++|++.+++|+.+++++++++.|.|+++      +.|+||++||..+..
T Consensus        76 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           76 KQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            99999999999999987554332    56789999999999999999999999999874      568999999988775


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecC
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCP  228 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~p  228 (275)
                      +.                                          ++...|++||++++.+++.++.|+  .+|+||+|+|
T Consensus       156 ~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  193 (257)
T 3tpc_A          156 GQ------------------------------------------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAP  193 (257)
T ss_dssp             CC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEe
Confidence            54                                          667899999999999999999998  5899999999


Q ss_pred             CeeecCCcCCC----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          229 GFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       229 G~v~T~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |+|+|++....                ...+|+|.++.++.++..  ...+|+.+..++
T Consensus       194 G~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdG  250 (257)
T 3tpc_A          194 GIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDG  250 (257)
T ss_dssp             CCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEEST
T ss_pred             CCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECC
Confidence            99999985321                123667777777666643  345565555543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=5.4e-39  Score=280.52  Aligned_cols=190  Identities=19%  Similarity=0.191  Sum_probs=167.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHH-hcCCCCCceeEEEecccChH-------
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLK-ASGVDPELLLFHQLDISDLA-------   71 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~-------   71 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++ |+.++++...+++. ..+.   ++.++++|+++.+       
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN---SAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSCBCCCC--
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC---eeEEEEeecCCccccccccc
Confidence            6778999999999999999999999999999999999 99988888887776 3332   3889999999999       


Q ss_pred             ----------HHHHHHHHHHhhcCCccEEEcCCcccccchhhccc--------------hhHHHHhHHhhcccHHHHHHH
Q 023896           72 ----------SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT--------------YELAVECLKTNYYGTKQTCEA  127 (275)
Q Consensus        72 ----------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~  127 (275)
                                +++++++++.+.+|++|+||||||.....++.+.+              .++|++.+++|+.++++++++
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                      99999999999999999999999987666666667              899999999999999999999


Q ss_pred             HhhhhhcCC------CCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhh
Q 023896          128 LIPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  201 (275)
Q Consensus       128 ~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  201 (275)
                      ++|.|++++      .++||++||..+..+.                                          ++...|+
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~  198 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------------LGYTIYT  198 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------------------------------------------TTCHHHH
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCC------------------------------------------CCCchhH
Confidence            999998776      6899999998877654                                          6778999


Q ss_pred             HhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          202 VSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       202 ~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                      +||++++.+++.++.|+  .+|+||+|+||+|+|++
T Consensus       199 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          199 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            99999999999999998  58999999999999998

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2e-39  Score=276.97  Aligned_cols=188  Identities=23%  Similarity=0.284  Sum_probs=162.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+. ++++.   .+...+.   ++.++++|++++++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~   76 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGR---RVLTVKCDVSQPGDVEAFGKQV   76 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTC---CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCC---cEEEEEeecCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998 66554   3333322   3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.        
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  148 (249)
T 2ew8_A           77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--------  148 (249)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC--------
Confidence            999999999999999877777778899999999999999999999999999987777899999998877553        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       149 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          149 ----------------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             ----------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence                                              667899999999999999999998  5899999999999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.3e-39  Score=281.44  Aligned_cols=225  Identities=22%  Similarity=0.221  Sum_probs=188.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+ .+..+...+++...+..   +.++++|+++++++.++++++
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK---AAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999995 44555666666655433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.        
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  173 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN--------  173 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--------
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC--------
Confidence            999999999999999988777778899999999999999999999999999998888999999998776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.++  ++|+||+|+||+|+|++...
T Consensus       174 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  219 (271)
T 4iin_A          174 ----------------------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN  219 (271)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----
T ss_pred             ----------------------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh
Confidence                                              677899999999999999999997  68999999999999998643


Q ss_pred             CC---------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 AG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ..               ..+|++.++.++.++.......+|..+..++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          220 LKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG  267 (271)
T ss_dssp             --------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence            21               2367777777776666555556666665544

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-39  Score=280.16  Aligned_cols=190  Identities=29%  Similarity=0.467  Sum_probs=170.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH-HhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+..+++...+++ ...+.   ++.++++|++++++++++++++.
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV---ETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999998888777776 33232   27889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc-cccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV-SALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~~~~~~~  160 (275)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||.. +..+.        
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------  166 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM--------  166 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS--------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC--------
Confidence            999999999999998777777788999999999999999999999999999887789999999987 65443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       167 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  211 (267)
T 1vl8_A          167 ----------------------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE  211 (267)
T ss_dssp             ----------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH
T ss_pred             ----------------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc
Confidence                                              567899999999999999999998  5899999999999999853

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1e-39  Score=280.67  Aligned_cols=218  Identities=19%  Similarity=0.164  Sum_probs=176.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.++..+..++.   .     +.++++|++++++++++++++
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G-----AVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T-----CEEEECCTTSHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C-----CeEEECCCCCHHHHHHHHHHH
Confidence            57788999999999999999999999999999999999987654443332   1     678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||...... .+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        94 ~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  164 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS--------  164 (260)
T ss_dssp             HHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC--------
T ss_pred             HHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------
Confidence            999999999999999865544 45678999999999999999999999999998888999999998877654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                        ++...|++||++++.+++.++.|+ ++|+||+|+||+|+|++....
T Consensus       165 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~  210 (260)
T 3gem_A          165 ----------------------------------SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA  210 (260)
T ss_dssp             ----------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------
T ss_pred             ----------------------------------CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH
Confidence                                              677899999999999999999998 789999999999999874321


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                   ...++++.++.++.++.  ....+|..+..+.
T Consensus       211 ~~~~~~~~~~p~~r~~~~edva~~v~~L~~--~~~itG~~i~vdG  253 (260)
T 3gem_A          211 AYRANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGTTLTVNG  253 (260)
T ss_dssp             ---------CCSCCCCCTHHHHHHHHHHHH--CSSCCSCEEEEST
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhh--CCCCCCCEEEECC
Confidence                         12367787877777663  2335565555443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.3e-39  Score=279.76  Aligned_cols=189  Identities=26%  Similarity=0.339  Sum_probs=167.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-HHHHHHHHHhc-CCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||++|||++++++|+++|++|++++|+..+ ++...+++... +.   ++.++++|++++++++++++++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~   78 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV---KVLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS---CEEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC---cEEEEECCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999887 77777766543 32   27889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  149 (260)
T 1x1t_A           79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---------  149 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC---------
Confidence            99999999999999877667778899999999999999999999999999987777899999998876553         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       150 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  194 (260)
T 1x1t_A          150 ---------------------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE  194 (260)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             ---------------------------------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHH
Confidence                                             567899999999999999999998  5899999999999999854

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-39  Score=276.97  Aligned_cols=188  Identities=24%  Similarity=0.292  Sum_probs=155.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---AISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999888888765433   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCccc---ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           82 TQFGKLDILTKGDAEV---DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        82 ~~~g~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.++++|+||||||..   ...++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+.         
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------  152 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---------  152 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---------
Confidence            9999999999999983   3444557789999999999999999999999999998888999999997765         


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.+++.++.++  ++|+||+|+||+|+|++.
T Consensus       153 ------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  196 (253)
T 3qiv_A          153 ------------------------------------LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN  196 (253)
T ss_dssp             -------------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred             ------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence                                                234679999999999999999998  589999999999999976


Q ss_pred             C
Q 023896          237 F  237 (275)
Q Consensus       237 ~  237 (275)
                      .
T Consensus       197 ~  197 (253)
T 3qiv_A          197 R  197 (253)
T ss_dssp             -
T ss_pred             h
Confidence            4

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.2e-39  Score=282.49  Aligned_cols=214  Identities=21%  Similarity=0.273  Sum_probs=189.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|+++.++++++++++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~  102 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---AHGVVCDVRHLDEMVRLADEA  102 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999999999988888766433   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..+.       
T Consensus       103 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  175 (301)
T 3tjr_A          103 FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-------  175 (301)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-------
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-------
Confidence            99999999999999998777788889999999999999999999999999998766 6899999998887664       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       176 -----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  220 (301)
T 3tjr_A          176 -----------------------------------AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS  220 (301)
T ss_dssp             -----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc
Confidence                                               678899999999999999999998  5899999999999999753


Q ss_pred             CC-------------------------CCCChhhhhccceeecccCC
Q 023896          238 HA-------------------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       238 ~~-------------------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ..                         ...+|++.++.++..+....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          221 NSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             HHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence            10                         13578888888777665443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.2e-39  Score=278.38  Aligned_cols=190  Identities=26%  Similarity=0.342  Sum_probs=172.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988887777765432   38889999999999999999999


Q ss_pred             hhc-CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  153 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV--------  153 (260)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC--------
T ss_pred             HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC--------
Confidence            999 89999999999877667778899999999999999999999999999988777999999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+++|++.
T Consensus       154 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (260)
T 2ae2_A          154 ----------------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV  197 (260)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH
T ss_pred             ----------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcch
Confidence                                              567899999999999999999999  589999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-39  Score=278.46  Aligned_cols=185  Identities=22%  Similarity=0.244  Sum_probs=167.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+ +...+++.       . .++++|++++++++++++++
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~~~~~~~~~~~~~   71 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLEDERERVRFVEEA   71 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCCCHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999877 55555542       2 57889999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.        
T Consensus        72 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  143 (256)
T 2d1y_A           72 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE--------  143 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC--------
Confidence            999999999999999877777778889999999999999999999999999988778999999998877554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.++  .+|+||+|+||+++|++.
T Consensus       144 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  187 (256)
T 2d1y_A          144 ----------------------------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV  187 (256)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             ----------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh
Confidence                                              567899999999999999999998  589999999999999864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1e-38  Score=274.07  Aligned_cols=223  Identities=22%  Similarity=0.195  Sum_probs=181.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +|++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      ++.++++|+++.++++++++++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~   77 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD------AALAVAADISKEADVDAAVEAA   77 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHH
Confidence            4678899999999999999999999999999999999999988887776521      2889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC----CCeEEEEecCccccCCCcH
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD----SPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~g~iv~vsS~~~~~~~~~~  155 (275)
                      .++++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++    .++||++||..+..+.   
T Consensus        78 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---  154 (261)
T 3n74_A           78 LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR---  154 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC---
T ss_pred             HHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC---
Confidence            999999999999999865 45566778999999999999999999999999998653    5789999998877554   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|+++|++++++++.++.|+  .+|+||+|+||+++|
T Consensus       155 ---------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  195 (261)
T 3n74_A          155 ---------------------------------------PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGET  195 (261)
T ss_dssp             ---------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----
T ss_pred             ---------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence                                                   667889999999999999999998  589999999999999


Q ss_pred             CCcCCC-------------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          234 DINFHA-------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       234 ~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ++....                   ...+|++.++.++.++.......+|..+..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  252 (261)
T 3n74_A          196 PLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG  252 (261)
T ss_dssp             ---------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC
Confidence            986432                   12467777777776665444555666665544

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.7e-38  Score=276.73  Aligned_cols=222  Identities=19%  Similarity=0.204  Sum_probs=182.7

Q ss_pred             CcccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |+++++|++|||||+|  |||++++++|+++|++|++++|+.+..+...+.....+ .   +.++++|++++++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-V---KLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-C---CEEEECCTTCHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-C---eEEEEcCCCCHHHHHHHHH
Confidence            4677899999999997  99999999999999999999999765544443333322 2   6789999999999999999


Q ss_pred             HHHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           79 FIKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.+++|+||+||||||+...    .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.  
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~--  176 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVV--  176 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCC--
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCC--
Confidence            999999999999999998764    55667899999999999999999999999999975  6899999998877554  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++.|+++++.|+  .+||||+|+||+|+
T Consensus       177 ----------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~  216 (296)
T 3k31_A          177 ----------------------------------------PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVR  216 (296)
T ss_dssp             ----------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCC
T ss_pred             ----------------------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCc
Confidence                                                    677899999999999999999998  58999999999999


Q ss_pred             cCCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          233 TDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       233 T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      |++.....                 ..+|++.++.+++++.......+|..+..+
T Consensus       217 T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd  271 (296)
T 3k31_A          217 TLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVD  271 (296)
T ss_dssp             CSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEEC
Confidence            99864321                 235666666666655544444555555443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-38  Score=276.62  Aligned_cols=224  Identities=21%  Similarity=0.188  Sum_probs=182.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC------------hhHHHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+            .++++...+.+...+..   +.++++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~   85 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR---IVARQADVRD   85 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCC---EEEEECCTTC
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCe---EEEEeCCCCC
Confidence            45789999999999999999999999999999999987            66666666666655433   8899999999


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCcc
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVS  148 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~  148 (275)
                      +++++++++++.+++|++|+||||||+.....    +.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            99999999999999999999999999865432    5789999999999999999999999998764 689999999888


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEee
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCV  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v  226 (275)
                      ..+..                                      ...++...|++||++++.+++.++.|+  .+|+||+|
T Consensus       162 ~~~~~--------------------------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v  203 (278)
T 3sx2_A          162 LAGVG--------------------------------------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSI  203 (278)
T ss_dssp             TSCCC--------------------------------------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             cCCCc--------------------------------------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEE
Confidence            75431                                      111345689999999999999999998  58999999


Q ss_pred             cCCeeecCCcCCC-------------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          227 CPGFVKTDINFHA-------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       227 ~pG~v~T~~~~~~-------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +||+|+|++....                         ...+|+|.++.+++++.......+|..+..+
T Consensus       204 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  272 (278)
T 3sx2_A          204 HPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVD  272 (278)
T ss_dssp             EESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             ecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeEC
Confidence            9999999986421                         1235666666666655544444555555444

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-38  Score=271.89  Aligned_cols=184  Identities=24%  Similarity=0.261  Sum_probs=166.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +|++|||||++|||++++++|+++|  +.|++++|+.++++...+++.      .++.++++|++++++++++++++.++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG------DRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG------GGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC------CceEEEECCCCCHHHHHHHHHHHHHh
Confidence            7899999999999999999999985  789999999988887776652      23889999999999999999999999


Q ss_pred             cCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.          
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~----------  144 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF----------  144 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS----------
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC----------
Confidence            999999999999854 36677889999999999999999999999999998765 899999999887654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++...|++||++++.+++.++.|+++||||+|+||+|+|++...
T Consensus       145 --------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~  188 (254)
T 3kzv_A          145 --------------------------------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVN  188 (254)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCC
T ss_pred             --------------------------------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHH
Confidence                                            67889999999999999999999999999999999999998754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=9.7e-40  Score=283.25  Aligned_cols=191  Identities=26%  Similarity=0.417  Sum_probs=172.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|++++++++++++++
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999998888877777655433   888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhh--hhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL--LELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.  |++++.++||++||..+..+.      
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------  167 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------  167 (277)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC------
Confidence            999999999999999877667778899999999999999999999999999  877667899999998876553      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|+++|++++.+++.++.|+  .+|+||+|+||+++|++.
T Consensus       168 ------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  211 (277)
T 2rhc_B          168 ------------------------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA  211 (277)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH
T ss_pred             ------------------------------------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh
Confidence                                                567899999999999999999998  589999999999999874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.7e-38  Score=271.88  Aligned_cols=190  Identities=24%  Similarity=0.324  Sum_probs=171.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc-CCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++... +.   ++.++++|++++++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   79 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV---RVLEVAVDVATPEGVDAVVESV   79 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC---CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777777543 32   2888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.        
T Consensus        80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  151 (263)
T 3ai3_A           80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL--------  151 (263)
T ss_dssp             HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC--------
Confidence            999999999999999877667777899999999999999999999999999987777899999998876543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       152 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (263)
T 3ai3_A          152 ----------------------------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDW  195 (263)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred             ----------------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence                                              567899999999999999999998  589999999999999863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.2e-38  Score=267.87  Aligned_cols=222  Identities=26%  Similarity=0.279  Sum_probs=192.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|++|||||++|||++++++|+++|++|++++|+.++++...+++....+.  ++.++++|++++++++++++++.+.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999988888877633222  38899999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++ +.+++|++||..+..+.            
T Consensus        79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~------------  145 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLI------------  145 (235)
T ss_dssp             SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCC------------
T ss_pred             CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccC------------
Confidence            99999999999988777888899999999999999999999999999954 45799999998776554            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC-----
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                                    +....|+++|++++++++.++.+.++||||+|+||+|+|++....     
T Consensus       146 ------------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~  195 (235)
T 3l77_A          146 ------------------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGKPK  195 (235)
T ss_dssp             ------------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCCCG
T ss_pred             ------------------------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCccc
Confidence                                          667899999999999999998887899999999999999986543     


Q ss_pred             --CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 --GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 --~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                        ...+|++.++.++.++..+.....+.+++.+.
T Consensus       196 ~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~  229 (235)
T 3l77_A          196 EKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV  229 (235)
T ss_dssp             GGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred             ccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence              24689999999999888887766666666543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.4e-38  Score=275.80  Aligned_cols=225  Identities=25%  Similarity=0.253  Sum_probs=188.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+    ++.++++|++++++++++++++
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS----CEEECCCCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----ceEEEEeeCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988887777775432    3888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC----CeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS----PRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.    ++||++||..+..+.    
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----  175 (276)
T 2b4q_A          100 GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----  175 (276)
T ss_dssp             HHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC----
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC----
Confidence            999999999999999877767777889999999999999999999999999987655    899999998876543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCc-hhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                            +... .|++||++++.+++.++.|+  .+|+||+|+||+|+|
T Consensus       176 --------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T  217 (276)
T 2b4q_A          176 --------------------------------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPS  217 (276)
T ss_dssp             --------------------------------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred             --------------------------------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcC
Confidence                                                  4556 89999999999999999998  589999999999999


Q ss_pred             CCcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          234 DINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       234 ~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ++....                 ...+|++.++.++.++..+....+|..+..+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          218 RMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             TTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            985320                 12366666666666655444445555555443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2e-38  Score=280.41  Aligned_cols=194  Identities=23%  Similarity=0.314  Sum_probs=172.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...+.. .++.++++|++++++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG-PEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-CeEEEEECCCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999888888765431 23889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------CCCeEEEEecCccccCCCc
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS------DSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~~~~~~~~  154 (275)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.++      +.|+||++||.++..+.  
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~--  159 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA--  159 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC--
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC--
Confidence            9999999999999998877788888999999999999999999999999999764      56899999999887664  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||+++++|++.++.++  .+|+|++|+||+|+
T Consensus       160 ----------------------------------------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~  199 (319)
T 3ioy_A          160 ----------------------------------------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVK  199 (319)
T ss_dssp             ----------------------------------------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC
T ss_pred             ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEc
Confidence                                                    667899999999999999999998  58999999999999


Q ss_pred             cCCcC
Q 023896          233 TDINF  237 (275)
Q Consensus       233 T~~~~  237 (275)
                      |++..
T Consensus       200 T~~~~  204 (319)
T 3ioy_A          200 SYIYA  204 (319)
T ss_dssp             -----
T ss_pred             cCccc
Confidence            99864

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=6.6e-39  Score=275.28  Aligned_cols=190  Identities=26%  Similarity=0.342  Sum_probs=170.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +..+.+|+++.++++++++++.+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---VTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888877777655432   88899999999999999999999


Q ss_pred             hcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.         
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  158 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF---------  158 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC---------
Confidence            9999999999999754 355667889999999999999999999999999988777899999998876543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++..
T Consensus       159 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          159 ---------------------------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch
Confidence                                             667899999999999999999998  5899999999999999853

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.7e-38  Score=274.27  Aligned_cols=224  Identities=21%  Similarity=0.198  Sum_probs=189.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||++|||++++++|+++|++|++++ |+.+..+...+++...+.   ++.++++|+++.++++++++++.
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR---DFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTC---CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC---ceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998 566666666666654433   38899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.         
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  169 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA---------  169 (269)
T ss_dssp             HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------
T ss_pred             HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC---------
Confidence            99999999999999887777778899999999999999999999999999988778999999998776554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++++++.++.++  .+|+||+|+||+|+|++....
T Consensus       170 ---------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          170 ---------------------------------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred             ---------------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence                                             677899999999999999999998  589999999999999986432


Q ss_pred             C----------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 G----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .                ..+|++.++.++.++.......+|..+..+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          217 PQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             ------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             chhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence            1                1267777777777666555556676666554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-38  Score=269.52  Aligned_cols=218  Identities=23%  Similarity=0.171  Sum_probs=183.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   +     +.++++|++++++++++++++.
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~D~~~~~~~~~~~~~~~   72 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G-----AHPVVMDVADPASVERGFAEAL   72 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T-----CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-----CEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987766654432   1     6778999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||.. ..+.         
T Consensus        73 ~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~---------  142 (245)
T 1uls_A           73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGN---------  142 (245)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCC---------
Confidence            999999999999998777777788999999999999999999999999999887779999999977 5443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.|+  .+|+||+|+||+|+|++....
T Consensus       143 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  189 (245)
T 1uls_A          143 ---------------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (245)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc
Confidence                                             567899999999999999999998  589999999999999986431


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                     ...+|++.++.++.++.......+|..+..+
T Consensus       190 ~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vd  235 (245)
T 1uls_A          190 PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVD  235 (245)
T ss_dssp             CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence                           1236667776666665544444555555444

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=7.5e-40  Score=282.46  Aligned_cols=205  Identities=20%  Similarity=0.264  Sum_probs=177.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.+|++|||||++|||++++++|+++|++|++++|+.++++...       .  ..+.++++|+++.++++++++++.+.
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-------L--PNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-------C--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-------c--CCceEEEecCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999987544321       1  13888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.           
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------  153 (266)
T 3p19_A           85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------  153 (266)
T ss_dssp             HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------
Confidence            999999999999987777778899999999999999999999999999988888999999998887654           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC-
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG-  240 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~-  240 (275)
                                                     ++...|++||++++.+++.++.++  .+||||+|+||+|+|++..... 
T Consensus       154 -------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~  202 (266)
T 3p19_A          154 -------------------------------PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS  202 (266)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC
T ss_pred             -------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc
Confidence                                           677899999999999999999998  5899999999999999865331 


Q ss_pred             ----------------CCChhhhhccceeecccCC
Q 023896          241 ----------------ILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       241 ----------------~~~~~~~a~~~~~~~~~~~  259 (275)
                                      ..+|+|.++.++.++..+.
T Consensus       203 ~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          203 QQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             hhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCC
Confidence                            2356666666665555444

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=2.3e-39  Score=277.98  Aligned_cols=186  Identities=23%  Similarity=0.284  Sum_probs=168.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH--HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +|++|||||++|||++++++|+++|++|++++|+..+  ++...+++...+.   ++.++++|++++++++++++++.+.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ---KAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTC---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999887  7777777765432   3888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++. |+||++||..+..+.          
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  148 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------  148 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC----------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC----------
Confidence            999999999999877777778899999999999999999999999999987666 899999998876554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                      ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       149 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  192 (258)
T 3a28_C          149 --------------------------------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW  192 (258)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh
Confidence                                            667899999999999999999998  589999999999999974

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5.6e-39  Score=275.81  Aligned_cols=192  Identities=18%  Similarity=0.122  Sum_probs=171.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...... .++.++++|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG-AQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877777542111 138889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.+| +|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  151 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW---------  151 (260)
T ss_dssp             HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------
Confidence            9999 999999999877667778899999999999999999999999999987777899999998876553         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       152 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          152 ---------------------------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             ---------------------------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence                                             667899999999999999999998  5899999999999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-38  Score=277.70  Aligned_cols=195  Identities=27%  Similarity=0.313  Sum_probs=171.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+....++.++++|++++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999999888888777665432124889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccch--hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSK--VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .+++|++|+||||||.....+  +.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.      
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~------  173 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------  173 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC------
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC------
Confidence            999999999999999876655  67789999999999999999999999999998766 899999998776432      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         .++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       174 -----------------------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~  218 (297)
T 1xhl_A          174 -----------------------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM  218 (297)
T ss_dssp             -----------------------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccc
Confidence                                               1456789999999999999999998  589999999999999974


Q ss_pred             C
Q 023896          237 F  237 (275)
Q Consensus       237 ~  237 (275)
                      .
T Consensus       219 ~  219 (297)
T 1xhl_A          219 G  219 (297)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-38  Score=275.04  Aligned_cols=194  Identities=27%  Similarity=0.333  Sum_probs=171.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+....++.++++|++++++++++++++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999888887777654332224889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccch----hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSK----VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+++|++|+||||||.....+    +.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+.    
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----  155 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA----  155 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC----
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC----
Confidence            999999999999999876555    66788999999999999999999999999998666 899999998765431    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                           .++...|++||++++.+++.++.|+  .+|+||+|+||+|+|+
T Consensus       156 -------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  198 (280)
T 1xkq_A          156 -------------------------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  198 (280)
T ss_dssp             -------------------------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             -------------------------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence                                                 1456789999999999999999998  5899999999999999


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      +.
T Consensus       199 ~~  200 (280)
T 1xkq_A          199 FT  200 (280)
T ss_dssp             HH
T ss_pred             cc
Confidence            74

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.1e-38  Score=278.63  Aligned_cols=188  Identities=23%  Similarity=0.293  Sum_probs=164.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH-HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+..+.. ...+.+...+.   ++.++++|++++++++++++++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV---KCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC---CEEEEESCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999987544 34444444332   3889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+++|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.       
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~-------  190 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGN-------  190 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCC-------
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCC-------
Confidence            999999999999999764 345667899999999999999999999999999953  5799999998876554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       191 -----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  234 (291)
T 3ijr_A          191 -----------------------------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI  234 (291)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHH
T ss_pred             -----------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcc
Confidence                                               667899999999999999999998  589999999999999985

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=282.65  Aligned_cols=222  Identities=21%  Similarity=0.280  Sum_probs=191.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-------HHHHHHHHHhcCCCCCceeEEEecccChHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~   74 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++       ++...+++...+..   +.++++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK---ALPCIVDVRDEQQIS  117 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCE---EEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCe---EEEEEccCCCHHHHH
Confidence            45689999999999999999999999999999999998874       45566666655433   889999999999999


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++++++.+++|+||+||||||.....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.  
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--  195 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--  195 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC--
Confidence            999999999999999999999988777888899999999999999999999999999998888999999998876541  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCe-ee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGF-VK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~-v~  232 (275)
                                                            +.++...|++||++++.+++.++.|+ .+|+||+|+||+ ++
T Consensus       196 --------------------------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~  237 (346)
T 3kvo_A          196 --------------------------------------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIH  237 (346)
T ss_dssp             --------------------------------------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBC
T ss_pred             --------------------------------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccc
Confidence                                                  12567899999999999999999999 699999999995 89


Q ss_pred             cCCcCCC-------CCCChhhhhccceeecccCCCCCcceEe
Q 023896          233 TDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFF  267 (275)
Q Consensus       233 T~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  267 (275)
                      |++....       ...+|++.++.++.++.. ....+|.++
T Consensus       238 T~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i  278 (346)
T 3kvo_A          238 TAAMDMLGGPGIESQCRKVDIIADAAYSIFQK-PKSFTGNFV  278 (346)
T ss_dssp             CHHHHHHCC--CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEE
T ss_pred             cHHHHhhccccccccCCCHHHHHHHHHHHHhc-CCCCCceEE
Confidence            9864321       245888999888888776 555677776

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=4.6e-38  Score=274.90  Aligned_cols=222  Identities=17%  Similarity=0.193  Sum_probs=177.6

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |+++++|++|||||+  +|||++++++|+++|++|++++|+....+.. +++......   +.++++|++++++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGA---FVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTC---EEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCC---ceEEECCCCCHHHHHHHHH
Confidence            456889999999999  4599999999999999999999996543333 333332222   7889999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccc----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           79 FIKTQFGKLDILTKGDAEVD----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.++||+||+||||||+..    ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.  
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~--  177 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVM--  177 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBC--
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCC--
Confidence            99999999999999999875    355667899999999999999999999999999974  6899999998877654  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++.|++.++.|+  .+||||+|+||+|+
T Consensus       178 ----------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  217 (293)
T 3grk_A          178 ----------------------------------------PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIK  217 (293)
T ss_dssp             ----------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             ----------------------------------------CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCc
Confidence                                                    677899999999999999999998  58999999999999


Q ss_pred             cCCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          233 TDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       233 T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      |++.....                 ..+|+|.++.++.++.......+|..+..+
T Consensus       218 T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  272 (293)
T 3grk_A          218 TLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHAD  272 (293)
T ss_dssp             C------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             chhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEEC
Confidence            99864321                 235666666666655544444555555444

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=4.3e-39  Score=275.79  Aligned_cols=221  Identities=21%  Similarity=0.260  Sum_probs=187.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++.      .++.++++|++++++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999987776655441      2378899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.          
T Consensus        76 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  145 (254)
T 1hdc_A           76 EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------  145 (254)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------
Confidence            9999999999999877666778899999999999999999999999999987777899999998877554          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.... 
T Consensus       146 --------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  193 (254)
T 1hdc_A          146 --------------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG  193 (254)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc
Confidence                                            567899999999999999999998  589999999999999863210 


Q ss_pred             --------------CCC-ChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 --------------GIL-SVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 --------------~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                    ... +|++.++.++.++..+....+|..+..+.
T Consensus       194 ~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  240 (254)
T 1hdc_A          194 IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence                          123 67777777777665444445566555443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.7e-38  Score=270.92  Aligned_cols=221  Identities=22%  Similarity=0.247  Sum_probs=186.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.+...+++..      .+.++++|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~   76 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAV   76 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------CceEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999887776665532      27788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  147 (260)
T 1nff_A           77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---------  147 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC---------
Confidence            99999999999999877666777889999999999999999999999999987777899999998876553         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++... 
T Consensus       148 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  194 (260)
T 1nff_A          148 ---------------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV  194 (260)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc
Confidence                                             567899999999999999999998  58999999999999997531 


Q ss_pred             --------C-CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 --------A-GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 --------~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                              . ...+|++.++.++.++.......+|..+..+
T Consensus       195 ~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~  235 (260)
T 1nff_A          195 PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVD  235 (260)
T ss_dssp             CTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhHHhCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence                    0 1246777777777666544334445554443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-39  Score=276.05  Aligned_cols=186  Identities=22%  Similarity=0.324  Sum_probs=169.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|+++.++++++++++.+.+|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999999888888777765543   288899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.            
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  146 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------  146 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC------------
Confidence            999999999987767777889999999999999999999999999998766 6899999998877554            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                    ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       147 ------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  190 (256)
T 1geg_A          147 ------------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW  190 (256)
T ss_dssp             ------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred             ------------------------------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh
Confidence                                          567899999999999999999998  589999999999999874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.6e-39  Score=277.76  Aligned_cols=227  Identities=22%  Similarity=0.215  Sum_probs=186.3

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHH-HHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+..+. +...+++....+.  ++.++++|++++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI--KAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC--CEECCBCCTTCHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC--ceeEEecCCCCHHHHHHHHH
Confidence            46789999999999  9999999999999999999999887654 5666666543222  38899999999999999999


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      ++.+.+++||+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.      
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------  167 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN------  167 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC------
Confidence            99999999999999999988777778899999999999999999999999999998888999999998876542      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        .+++...|++||++++.+++.++.++ +.|+||+|+||+|+|++..
T Consensus       168 ----------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~  213 (267)
T 3gdg_A          168 ----------------------------------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD  213 (267)
T ss_dssp             ----------------------------------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG
T ss_pred             ----------------------------------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh
Confidence                                              11357889999999999999999999 4599999999999999865


Q ss_pred             CCC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...               ..+|++.++.++.++.......+|..+..+
T Consensus       214 ~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vd  261 (267)
T 3gdg_A          214 FVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLID  261 (267)
T ss_dssp             GSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEES
T ss_pred             hCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEEC
Confidence            321               123555565555555443344555555444

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-39  Score=277.79  Aligned_cols=194  Identities=28%  Similarity=0.335  Sum_probs=163.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.++++...+++........++.++++|++++++++++++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999998888877777432222234888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhcc----chhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc-ccCCCcH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQ----TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDLPE  155 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~  155 (275)
                      .+++|++|+||||||.....++.+.    +.++|++.+++|+.++++++++++|.|++++ |+||++||..+ ..+.   
T Consensus        81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~---  156 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT---  156 (278)
T ss_dssp             HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC---
T ss_pred             HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC---
Confidence            9999999999999998766656566    8899999999999999999999999998765 89999999887 5443   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|++||++++.+++.++.++  .+|+||+|+||+|+|
T Consensus       157 ---------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  197 (278)
T 1spx_A          157 ---------------------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVAT  197 (278)
T ss_dssp             ---------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCC
T ss_pred             ---------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccC
Confidence                                                   567889999999999999999998  589999999999999


Q ss_pred             CCcC
Q 023896          234 DINF  237 (275)
Q Consensus       234 ~~~~  237 (275)
                      ++..
T Consensus       198 ~~~~  201 (278)
T 1spx_A          198 GFGS  201 (278)
T ss_dssp             CC--
T ss_pred             cccc
Confidence            9853

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.5e-39  Score=277.44  Aligned_cols=226  Identities=21%  Similarity=0.211  Sum_probs=188.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEE-EecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++.+|++|||||++|||++++++|+++|++|++ ..|+..+.+...+++...+..   +.++++|+++++++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGN---GRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHH
Confidence            35678899999999999999999999999999966 557888888888888766543   88999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh-cCCCCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.++++++|+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|. +.+.++||++||..+..+.      
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  171 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN------  171 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC------
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC------
Confidence            999999999999999998777777889999999999999999999999988885 5567899999998776554      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       172 ------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  215 (267)
T 4iiu_A          172 ------------------------------------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI  215 (267)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             ------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc
Confidence                                                677899999999999999999998  589999999999999986


Q ss_pred             CCC--------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          237 FHA--------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       237 ~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ...              ...++++.++.++.++.......+|+.+..+.
T Consensus       216 ~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          216 EMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISING  264 (267)
T ss_dssp             CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCC
Confidence            432              12366777777666665544555666555443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-39  Score=285.17  Aligned_cols=224  Identities=18%  Similarity=0.144  Sum_probs=184.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHH-hcCCCCCceeEEEecccChH-------
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLK-ASGVDPELLLFHQLDISDLA-------   71 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~-------   71 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++ |+.++++...+++. ..+.   ++.++++|+++.+       
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~d~~~~~~~~~  117 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN---SAITVQADLSNVATAPVSGA  117 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSCBCC----
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC---eEEEEEeeCCCchhcccccc
Confidence            4457899999999999999999999999999999999 99988888877776 3322   3889999999999       


Q ss_pred             ----------HHHHHHHHHHhhcCCccEEEcCCcccccchhhccc--------------hhHHHHhHHhhcccHHHHHHH
Q 023896           72 ----------SVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT--------------YELAVECLKTNYYGTKQTCEA  127 (275)
Q Consensus        72 ----------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~  127 (275)
                                +++++++++.+.++++|+||||||+....++.+.+              .++|++.+++|+.+++.++++
T Consensus       118 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  197 (328)
T 2qhx_A          118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  197 (328)
T ss_dssp             ---CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence                      99999999999999999999999987666666666              899999999999999999999


Q ss_pred             HhhhhhcCC------CCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhh
Q 023896          128 LIPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  201 (275)
Q Consensus       128 ~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  201 (275)
                      ++|.|.+++      .++||++||..+..+.                                          ++...|+
T Consensus       198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------------------~~~~~Y~  235 (328)
T 2qhx_A          198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------------LGYTIYT  235 (328)
T ss_dssp             HHHHHHHSCGGGSCSCEEEEEECCTTTTSCC------------------------------------------TTCHHHH
T ss_pred             HHHHHHhcCCcCCCCCcEEEEECchhhccCC------------------------------------------CCcHHHH
Confidence            999998776      6899999998877554                                          6678999


Q ss_pred             HhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC---------------CCCChhhhhccceeecccCCCCCcc
Q 023896          202 VSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTG  264 (275)
Q Consensus       202 ~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~  264 (275)
                      +||++++.+++.++.|+  .+|+||+|+||+|+|++ ...               ...+|++.++.++.++.......+|
T Consensus       236 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG  314 (328)
T 2qhx_A          236 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITG  314 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999998  58999999999999998 321               1235666676666665544444555


Q ss_pred             eEeccC
Q 023896          265 RFFLRK  270 (275)
Q Consensus       265 ~~~~~~  270 (275)
                      ..+..+
T Consensus       315 ~~i~vd  320 (328)
T 2qhx_A          315 TCVKVD  320 (328)
T ss_dssp             CEEEES
T ss_pred             cEEEEC
Confidence            555444

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=4.4e-39  Score=284.90  Aligned_cols=223  Identities=20%  Similarity=0.202  Sum_probs=187.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC----------hhHHHHHHHHHHhcCCCCCceeEEEecccCh
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD----------EKRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~   70 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+          ...++...+++...+.   ++.++++|++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~   98 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG---EAVADGSNVADW   98 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC---EEEEECCCTTSH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC---cEEEEECCCCCH
Confidence            567889999999999999999999999999999999998          6677777777776543   388899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC------CCeEEEEe
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD------SPRLVNLS  144 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~vs  144 (275)
                      ++++++++++.+++|+||+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+.+      +|+||++|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            999999999999999999999999998777788889999999999999999999999999987432      37999999


Q ss_pred             cCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeE
Q 023896          145 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC  222 (275)
Q Consensus       145 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~  222 (275)
                      |..+..+.                                          ++...|++||++++.|++.++.|+  .+|+
T Consensus       179 S~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~  216 (322)
T 3qlj_A          179 SGAGLQGS------------------------------------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVT  216 (322)
T ss_dssp             CHHHHHCB------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CHHHccCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhcccCcE
Confidence            98876554                                          667899999999999999999998  5899


Q ss_pred             EEeecCCeeecCCcCCCC------------CCChhhhhccceeecccCCCCCcceEecc
Q 023896          223 VNCVCPGFVKTDINFHAG------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       223 vn~v~pG~v~T~~~~~~~------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ||+|+|| +.|++.....            ..+|++.++.++.++.......+|..+..
T Consensus       217 vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~v  274 (322)
T 3qlj_A          217 VNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEV  274 (322)
T ss_dssp             EEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEE
T ss_pred             EEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            9999999 9998864321            23566666666665544333344554443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-38  Score=271.71  Aligned_cols=224  Identities=25%  Similarity=0.244  Sum_probs=190.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ..++|++|||||++|||++++++|+++|++|++++ |+..+.+...+++...+..   +.++++|+++.++++++++++.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD---FYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe---eEEEecCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999988 6777777777777665433   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.         
T Consensus        87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  157 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------  157 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC---------
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC---------
Confidence            99999999999999887777778899999999999999999999999999998888999999998887664         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       158 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          158 ---------------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             ---------------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             ---------------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence                                             678899999999999999999998  589999999999999986432


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...+|++.++.++.++.......+|..+..+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          205 RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence                           12367777777776665444556666665544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.1e-39  Score=281.89  Aligned_cols=213  Identities=28%  Similarity=0.339  Sum_probs=179.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+....          ..   ....+++|++++++++++++++.+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~---~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VN---VSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TT---SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cC---ceeEEEecCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999987542          11   267789999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.          
T Consensus        78 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  147 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT----------  147 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------
Confidence            9999999999999987777788899999999999999999999999999988788999999998887654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcCCC--
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                      ++...|++||++++++++.++.|+ ++|+||+|+||+|+|++....  
T Consensus       148 --------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~  195 (269)
T 3vtz_A          148 --------------------------------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAK  195 (269)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHH
T ss_pred             --------------------------------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhh
Confidence                                            677899999999999999999998 789999999999999974211  


Q ss_pred             ------------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                              ...+|++.++.++.++.......+|..+..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  250 (269)
T 3vtz_A          196 MEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVD  250 (269)
T ss_dssp             HHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEEC
Confidence                                    1235666666666655544444555555443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.7e-38  Score=268.87  Aligned_cols=224  Identities=19%  Similarity=0.158  Sum_probs=186.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHH---CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~---~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ++++|++|||||++|||++++++|++   +|++|++++|+.++++...+++..... ..++.++++|+++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHHHHHHHHHH
Confidence            57899999999999999999999999   899999999999988888877765421 12388899999999999999999


Q ss_pred             HHh--hcCCcc--EEEcCCccccc--chhhc-cchhHHHHhHHhhcccHHHHHHHHhhhhhcC--CCCeEEEEecCcccc
Q 023896           80 IKT--QFGKLD--ILTKGDAEVDW--SKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSSYVSAL  150 (275)
Q Consensus        80 ~~~--~~g~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g~iv~vsS~~~~~  150 (275)
                      +.+  .+|++|  +||||||....  .++.+ .+.++|++.+++|+.++++++++++|.|+++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  678899  99999997543  34556 6889999999999999999999999999876  568999999988775


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCe
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGF  230 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~  230 (275)
                      +.                                          ++...|++||++++.+++.++.|+.+||||+|+||+
T Consensus       162 ~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~  199 (259)
T 1oaa_A          162 PY------------------------------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGP  199 (259)
T ss_dssp             CC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCS
T ss_pred             CC------------------------------------------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCC
Confidence            54                                          667899999999999999999999779999999999


Q ss_pred             eecCCcCC--------------------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          231 VKTDINFH--------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       231 v~T~~~~~--------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      |+|++...                    ....+|++.++.++.++.. ....+|..+..+
T Consensus       200 v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vd  258 (259)
T 1oaa_A          200 LDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             BSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETT
T ss_pred             cCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEecc
Confidence            99997431                    1135677777777766653 334556655443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-38  Score=275.24  Aligned_cols=199  Identities=22%  Similarity=0.291  Sum_probs=166.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC------------hhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+            .++++...+++...+.   ++.++++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~   81 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR---KAYTAEVDVR   81 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS---CEEEEECCTT
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC---ceEEEEccCC
Confidence            778899999999999999999999999999999999998            6666676666665543   3889999999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      ++++++++++++.+++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.  +.++||++||..+
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~  157 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAG  157 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchh
Confidence            99999999999999999999999999986654  2378899999999999999999999999993  4589999999876


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEee
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCV  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v  226 (275)
                      ..+....                               ...+..+.++...|++||++++.+++.++.++  .+|+||+|
T Consensus       158 ~~~~~~~-------------------------------~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v  206 (287)
T 3pxx_A          158 LIAAAQP-------------------------------PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVI  206 (287)
T ss_dssp             HHHHHCC-------------------------------C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             ccccccc-------------------------------ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            5432000                               00000111345789999999999999999998  58999999


Q ss_pred             cCCeeecCCcC
Q 023896          227 CPGFVKTDINF  237 (275)
Q Consensus       227 ~pG~v~T~~~~  237 (275)
                      +||+|+|++..
T Consensus       207 ~PG~v~T~~~~  217 (287)
T 3pxx_A          207 HPTNVNTDMLN  217 (287)
T ss_dssp             EESSBSSTTTS
T ss_pred             ecCcccccccc
Confidence            99999999864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.1e-40  Score=283.03  Aligned_cols=215  Identities=23%  Similarity=0.252  Sum_probs=179.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+....+.              ...+++|+++.+++.++++++
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------DLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------SEECCCCTTSHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------hhccCcCCCCHHHHHHHHHHH
Confidence            677899999999999999999999999999999999998753211              234579999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..+.        
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  160 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG--------  160 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC--------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC--------
Confidence            999999999999999988777888899999999999999999999999999998888999999998887654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++...
T Consensus       161 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          161 ----------------------------------PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred             ----------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence                                              677899999999999999999998  58999999999999997421


Q ss_pred             C----------------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A----------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .                      ...+|++.++.++.++.......+|..+..+.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          207 GFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             HHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            0                      12356666666666655444445555555443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.2e-37  Score=270.35  Aligned_cols=223  Identities=18%  Similarity=0.100  Sum_probs=185.3

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |+++++|++|||||+  +|||++++++|+++|++|++++|+.  .++..+++......   +.++++|+++.++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNP---AAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCC---SEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCC---ceEEEeecCCHHHHHHHHH
Confidence            778899999999988  7799999999999999999999998  33444555444333   7889999999999999999


Q ss_pred             HHHhhcCCccEEEcCCccccc----chhhc-cchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           79 FIKTQFGKLDILTKGDAEVDW----SKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      ++.+.++++|+||||||....    .++.+ .+.++|++.+++|+.++++++++++|.|+++ .++||++||..+..+. 
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-  173 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAM-  173 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCC-
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCC-
Confidence            999999999999999998654    33444 7899999999999999999999999999865 5899999998877654 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               ++...|++||++++.+++.++.|+  .+|+||+|+||+|
T Consensus       174 -----------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v  212 (280)
T 3nrc_A          174 -----------------------------------------PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPI  212 (280)
T ss_dssp             -----------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC
T ss_pred             -----------------------------------------CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccc
Confidence                                                     677899999999999999999998  5899999999999


Q ss_pred             ecCCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          232 KTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       232 ~T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      +|++.....                 ..+|++.++.++.++.......+|..+..+.
T Consensus       213 ~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          213 KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             CCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             cchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence            999864321                 3467777777776666444455666655543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.1e-37  Score=266.73  Aligned_cols=224  Identities=18%  Similarity=0.153  Sum_probs=187.4

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+....+...+.......  .++.++++|+++.+++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHHHHHHHHHH
Confidence            47899999999999  6699999999999999999999997655554444333332  1388999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccc----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           80 IKTQFGKLDILTKGDAEVD----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      +.++++++|+||||||...    ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.   
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~---  155 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVM---  155 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCC---
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccC---
Confidence            9999999999999999865    355667889999999999999999999999999964  5899999998887654   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|
T Consensus       156 ---------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T  196 (266)
T 3oig_A          156 ---------------------------------------PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT  196 (266)
T ss_dssp             ---------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred             ---------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccc
Confidence                                                   678899999999999999999998  589999999999999


Q ss_pred             CCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          234 DINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       234 ~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ++.....                 ..+|++.++.++.++.......+|..+..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          197 LSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             GGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence            8865431                 3578888888877776555556666665543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=9.4e-38  Score=272.10  Aligned_cols=223  Identities=20%  Similarity=0.167  Sum_probs=180.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHH-hcCCCCCceeEEEecccC----hHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLK-ASGVDPELLLFHQLDISD----LASVSS   75 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~----~~~v~~   75 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+. ++++...+++. ..+.   ++.++++|+++    .+++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN---TAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSCSTTHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCC---ceEEEEeecCCccCCHHHHHH
Confidence            457899999999999999999999999999999999998 77777777775 3332   38899999999    999999


Q ss_pred             HHHHHHhhcCCccEEEcCCcccccchh-----hc-----cchhHHHHhHHhhcccHHHHHHHHhhhhhcCC------CCe
Q 023896           76 LADFIKTQFGKLDILTKGDAEVDWSKV-----CY-----QTYELAVECLKTNYYGTKQTCEALIPLLELSD------SPR  139 (275)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~  139 (275)
                      +++++.+.++++|+||||||.....++     .+     .+.++|++.+++|+.+++.++++++|.|++++      .|+
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  175 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLS  175 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEE
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence            999999999999999999998765555     45     78899999999999999999999999998765      689


Q ss_pred             EEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-
Q 023896          140 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  218 (275)
Q Consensus       140 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-  218 (275)
                      ||++||..+..+.                                          ++...|++||++++.+++.++.++ 
T Consensus       176 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  213 (288)
T 2x9g_A          176 IVNLCDAMVDQPC------------------------------------------MAFSLYNMGKHALVGLTQSAALELA  213 (288)
T ss_dssp             EEEECCTTTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEecccccCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876553                                          667899999999999999999998 


Q ss_pred             -CCeEEEeecCCeeecCCcCC-------------CC-C-CChhhhhccceeecccCCCCCcceEeccC
Q 023896          219 -PKFCVNCVCPGFVKTDINFH-------------AG-I-LSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       219 -~~i~vn~v~pG~v~T~~~~~-------------~~-~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                       .+|+||+|+||+|+|++ ..             .. . .+|++.++.+++++.......+|..+..+
T Consensus       214 ~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vd  280 (288)
T 2x9g_A          214 PYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVD  280 (288)
T ss_dssp             GGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence             58999999999999998 21             01 2 46666666666665544444555555443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.8e-39  Score=275.98  Aligned_cols=216  Identities=22%  Similarity=0.207  Sum_probs=181.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+......            ..+.++++|++++++++++++++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------------PDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------CceEEEEccCCCHHHHHHHHHHH
Confidence            567889999999999999999999999999999999998753211            13889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+++|++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.++||++||..+..+.        
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  162 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM--------  162 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB--------
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC--------
Confidence            999999999999999987777788899999999999999999999999999998888999999997765322        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      +..+...|++||++++.+++.++.++  .+|+||+|+||+|+|++...
T Consensus       163 --------------------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          163 --------------------------------VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             --------------------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred             --------------------------------CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence                                            11456789999999999999999999  58999999999999998642


Q ss_pred             C------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .            ...+++|.++.++.+..  ....+|..+..+
T Consensus       211 ~~~~~~~~~~p~~r~~~~~dva~av~~L~~--~~~itG~~i~vd  252 (260)
T 3un1_A          211 ETHSTLAGLHPVGRMGEIRDVVDAVLYLEH--AGFITGEILHVD  252 (260)
T ss_dssp             GGHHHHHTTSTTSSCBCHHHHHHHHHHHHH--CTTCCSCEEEES
T ss_pred             HHHHHHhccCCCCCCcCHHHHHHHHHHhcc--cCCCCCcEEEEC
Confidence            1            12467777777776622  233455555444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2e-38  Score=271.36  Aligned_cols=186  Identities=25%  Similarity=0.303  Sum_probs=168.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   +   .++.++++|++++++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~~~~~~   75 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G---ERSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CceEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998877776665   2   138889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.         
T Consensus        76 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---------  145 (253)
T 1hxh_A           76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI---------  145 (253)
T ss_dssp             HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC---------
Confidence            9999999999999987777777889999999999999999999999999998777 999999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--C--CeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P--KFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~--~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||++++.+++.++.|+  .  +|+||+|+||+|+|++.
T Consensus       146 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~  191 (253)
T 1hxh_A          146 ---------------------------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM  191 (253)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred             ---------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence                                             667899999999999999999997  3  89999999999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-38  Score=272.93  Aligned_cols=219  Identities=22%  Similarity=0.187  Sum_probs=180.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++.      .++.++++|++++++++++++++
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999987766655442      23888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.| ++ .|+||++||..+. +.        
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~--------  143 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GA--------  143 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CH--------
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CC--------
Confidence            9999999999999998776667778999999999999999999999999999 44 6899999998876 42        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++...
T Consensus       144 ----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          144 ----------------------------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             ----------------------------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence                                              345789999999999999999998  58999999999999998643


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .               ...+|++.++.++.++.......+|..+..+
T Consensus       190 ~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vd  236 (263)
T 2a4k_A          190 LPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVD  236 (263)
T ss_dssp             SCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence            2               1246677777666665544444555555444

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-38  Score=273.36  Aligned_cols=187  Identities=24%  Similarity=0.355  Sum_probs=166.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+..  +...+++...+.   ++.++++|++++++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~   75 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGV---KAVHHPADLSDVAQIEALFALAER   75 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSC---CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCC---ceEEEeCCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876  444555554332   378889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.          
T Consensus        76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  145 (255)
T 2q2v_A           76 EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS----------  145 (255)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC----------
Confidence            9999999999999877667777899999999999999999999999999988777999999998877553          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                      ++...|+++|++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       146 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (255)
T 2q2v_A          146 --------------------------------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV  189 (255)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch
Confidence                                            567899999999999999999998  589999999999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.3e-37  Score=269.41  Aligned_cols=221  Identities=20%  Similarity=0.205  Sum_probs=183.0

Q ss_pred             CcccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      |.++++|++|||||+  +|||++++++|+++|++|++++|+.. .+...+++......   +.++++|++++++++++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~   76 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS---PYVYELDVSKEEHFKSLYN   76 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC---cEEEEcCCCCHHHHHHHHH
Confidence            677899999999999  99999999999999999999999986 44445555443222   6788999999999999999


Q ss_pred             HHHhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           79 FIKTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.  
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~--  152 (275)
T 2pd4_A           77 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYM--  152 (275)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC--
T ss_pred             HHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCC--
Confidence            999999999999999998654    45667889999999999999999999999999974  4899999998776553  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++.+++.++.++  .+|+||+|+||+|+
T Consensus       153 ----------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  192 (275)
T 2pd4_A          153 ----------------------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIR  192 (275)
T ss_dssp             ----------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             ----------------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence                                                    567889999999999999999998  58999999999999


Q ss_pred             cCCcCCC-----------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          233 TDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       233 T~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      |++....                 ...+|++.++.++.++.......+|.++..
T Consensus       193 T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~v  246 (275)
T 2pd4_A          193 TLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFV  246 (275)
T ss_dssp             CTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             cchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            9985431                 124777777777776654444455555543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=5e-38  Score=272.68  Aligned_cols=221  Identities=21%  Similarity=0.199  Sum_probs=187.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++...+++   .   .++.++++|+++.++++++++++.
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~~~~~~~~~~   74 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---P---DRAEAISLDVTDGERIDVVAADVL   74 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---T---TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---c---CCceEEEeeCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998877665543   1   138899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.|++.++++++|.|++++.++||++||..+..+.         
T Consensus        75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  145 (281)
T 3m1a_A           75 ARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF---------  145 (281)
T ss_dssp             HHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC---------
Confidence            99999999999999887777778899999999999999999999999999998878999999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       146 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  192 (281)
T 3m1a_A          146 ---------------------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKG  192 (281)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCC
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccccc
Confidence                                             678899999999999999999998  589999999999999985321


Q ss_pred             ----------------------------CCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          240 ----------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       240 ----------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                                  ...++++.++.++.++..+.  ...++++.++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~~  251 (281)
T 3m1a_A          193 AAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK--TPLRLALGGDA  251 (281)
T ss_dssp             CEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS--CCSEEEESHHH
T ss_pred             ccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCchH
Confidence                                        12467777777777666543  45667766554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.1e-37  Score=264.48  Aligned_cols=204  Identities=21%  Similarity=0.264  Sum_probs=172.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+++.   .   ++.++++|++++++++++++++.+.+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---D---NLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---C---ceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988777766653   1   2888999999999999999999999999


Q ss_pred             ccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.             
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------  141 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-------------  141 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------------
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-------------
Confidence            999999999763 455667889999999999999999999999999987777999999998876553             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee-cCCcCCC---
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK-TDINFHA---  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~-T~~~~~~---  239 (275)
                                                   ++...|++||++++.+++.++.|+  .+||||+|+||+|+ |++....   
T Consensus       142 -----------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~  192 (248)
T 3asu_A          142 -----------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG  192 (248)
T ss_dssp             -----------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------
T ss_pred             -----------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC
Confidence                                         667899999999999999999998  58999999999999 9975310   


Q ss_pred             ------------CCCChhhhhccceeecccC
Q 023896          240 ------------GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       240 ------------~~~~~~~~a~~~~~~~~~~  258 (275)
                                  ...+|++.++.++.++..+
T Consensus       193 ~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          193 DDGKAEKTYQNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             ------------CCBCHHHHHHHHHHHHHSC
T ss_pred             chHHHHHHHhccCCCCHHHHHHHHHHHhcCC
Confidence                        1346777777777666543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.8e-37  Score=266.73  Aligned_cols=220  Identities=21%  Similarity=0.235  Sum_probs=180.2

Q ss_pred             ccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.. .+...+++....+.   +.++++|+++.++++++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS---DLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC---eEEEEcCCCCHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999985 44444555443222   678899999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+.+|++|+||||||....    .++.+.+.++|++.+++|+.|+++++++++|.|+++ .|+||++||..+..+.    
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~----  168 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVV----  168 (285)
T ss_dssp             HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBC----
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCC----
Confidence            9999999999999998654    456678899999999999999999999999999754 5899999998776543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||++++.+++.++.++  .+|+||+|+||+|+|+
T Consensus       169 --------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  210 (285)
T 2p91_A          169 --------------------------------------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTL  210 (285)
T ss_dssp             --------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCS
T ss_pred             --------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCc
Confidence                                                  567789999999999999999998  5899999999999999


Q ss_pred             CcCCC-----------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          235 INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       235 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      +....                 ...+|++.++.++.++.......+|..+..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~v  262 (285)
T 2p91_A          211 AAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHV  262 (285)
T ss_dssp             CC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             hhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEE
Confidence            75321                 124677777777766654334445554443

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-38  Score=274.01  Aligned_cols=187  Identities=26%  Similarity=0.314  Sum_probs=167.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++...+++..      .+.++++|++++++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT------CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998877665544322      27788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||..+..+.        
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  153 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--------  153 (263)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC--------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC--------
Confidence            9999999999999987766677889999999999999999999999999998776 6899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       154 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (263)
T 3ak4_A          154 ----------------------------------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQ  197 (263)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHH
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhh
Confidence                                              567899999999999999999998  589999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.7e-38  Score=273.65  Aligned_cols=221  Identities=21%  Similarity=0.185  Sum_probs=177.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhc-CCCCCceeEEEecccCh----HHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKAS-GVDPELLLFHQLDISDL----ASVSSL   76 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~----~~v~~~   76 (275)
                      ++++|++|||||++|||++++++|+++|++|++++| +.++++...+++... +.   ++.++++|+++.    ++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG---SAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC---ceEEEeccCCCccccHHHHHHH
Confidence            467899999999999999999999999999999999 888888877777654 32   288899999999    999999


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccch-----------hHHHHhHHhhcccHHHHHHHHhhhhhcCCC------Ce
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTY-----------ELAVECLKTNYYGTKQTCEALIPLLELSDS------PR  139 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------g~  139 (275)
                      ++++.+.+|++|+||||||.....++.+.+.           ++|++.+++|+.++++++++++|.|. ++.      ++
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            9999999999999999999876666666677           89999999999999999999999997 454      89


Q ss_pred             EEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-
Q 023896          140 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  218 (275)
Q Consensus       140 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-  218 (275)
                      ||++||..+..+.                                          ++...|++||++++.+++.++.++ 
T Consensus       164 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~  201 (276)
T 1mxh_A          164 VVNLCDAMTDLPL------------------------------------------PGFCVYTMAKHALGGLTRAAALELA  201 (276)
T ss_dssp             EEEECCGGGGSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECchhhcCCC------------------------------------------CCCeehHHHHHHHHHHHHHHHHHHh
Confidence            9999998877554                                          667899999999999999999998 


Q ss_pred             -CCeEEEeecCCeeecCCcCC-------------C-C-CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          219 -PKFCVNCVCPGFVKTDINFH-------------A-G-ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       219 -~~i~vn~v~pG~v~T~~~~~-------------~-~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                       .+|+||+|+||+|+|+ ...             . . ..+|++.++.++.++.......+|..+..+
T Consensus       202 ~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  268 (276)
T 1mxh_A          202 PRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVD  268 (276)
T ss_dssp             GGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence             5899999999999998 210             0 1 346667776666655543334455555443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.6e-37  Score=266.10  Aligned_cols=219  Identities=18%  Similarity=0.156  Sum_probs=179.2

Q ss_pred             cCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+  +|||++++++|+++|++|++++|+. +.+...+++......   ..++++|++++++++++++++.
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---DIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC---cEEEEccCCCHHHHHHHHHHHH
Confidence            789999999999  9999999999999999999999988 444455555443222   4678999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc----chhhc-cchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           82 TQFGKLDILTKGDAEVDW----SKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++++++|+||||||....    .++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.    
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~----  156 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAI----  156 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC----
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCC----
Confidence            999999999999997653    45556 789999999999999999999999999964  4799999998776543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||++++.+++.++.++  .+|+||+|+||+|+|+
T Consensus       157 --------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  198 (265)
T 1qsg_A          157 --------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  198 (265)
T ss_dssp             --------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCT
T ss_pred             --------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccc
Confidence                                                  567789999999999999999998  5899999999999999


Q ss_pred             CcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          235 INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       235 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +....                 ...+|++.++.++.++.......+|..+..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  251 (265)
T 1qsg_A          199 AASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD  251 (265)
T ss_dssp             TGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence            85421                 1246777777776666544444455554443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-37  Score=264.88  Aligned_cols=227  Identities=19%  Similarity=0.204  Sum_probs=184.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.....+..+++....  ..++.++++|++++++++++++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG--GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999887665444333332221  12388999999999999999999999


Q ss_pred             hcCCccEEEcCCc--ccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDA--EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++|+||||||  .....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.....          
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------  151 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADS----------  151 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGG----------
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcc----------
Confidence            9999999999999  4445666778999999999999999999999999999888889999999973220          


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                    ..+.++...|++||++++.+++.++.++  .+|+||+|+||+|+|++...
T Consensus       152 ------------------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  201 (264)
T 3i4f_A          152 ------------------------------APGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA  201 (264)
T ss_dssp             ------------------------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC
T ss_pred             ------------------------------cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh
Confidence                                          0112567899999999999999999998  58999999999999998643


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .               ...+|++.++.++.++.......+|..+..++
T Consensus       202 ~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          202 TIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             CHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             ccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            2               13477888888887776655566677666654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=8.1e-38  Score=268.14  Aligned_cols=216  Identities=20%  Similarity=0.222  Sum_probs=172.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++..   +++   .   .++.++++|++++++++++++.+.
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~---~---~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL---G---DRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT---C---TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc---C---CceEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999665322   222   2   238899999999999999999887


Q ss_pred             hhcCCccEEEcCCcccccchhh----ccchhHHHHhHHhhcccHHHHHHHHhhhhhc--------CCCCeEEEEecCccc
Q 023896           82 TQFGKLDILTKGDAEVDWSKVC----YQTYELAVECLKTNYYGTKQTCEALIPLLEL--------SDSPRLVNLSSYVSA  149 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--------~~~g~iv~vsS~~~~  149 (275)
                      + ++++|+||||||.....+..    +.+.++|++.+++|+.++++++++++|.|.+        ++.|+||++||..+.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 99999999999986554332    3788999999999999999999999999987        567899999998887


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~  227 (275)
                      .+.                                          ++...|++||++++.+++.++.|+  .+|+||+|+
T Consensus       155 ~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~  192 (257)
T 3tl3_A          155 DGQ------------------------------------------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIA  192 (257)
T ss_dssp             CCH------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             CCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEE
Confidence            553                                          446789999999999999999998  589999999


Q ss_pred             CCeeecCCcCCC----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          228 PGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       228 pG~v~T~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ||+|+|++....                ...+|+|.++.++.++..  ...+|..+..++
T Consensus       193 PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdG  250 (257)
T 3tl3_A          193 PGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDG  250 (257)
T ss_dssp             ECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEEST
T ss_pred             ecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECC
Confidence            999999986432                134677888777776654  345666665544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.7e-37  Score=268.48  Aligned_cols=208  Identities=23%  Similarity=0.240  Sum_probs=174.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +|+ |++|||||++|||++++++|+++|++|++++|+.++++...+++...    .++.++++|++++++++++++++.+
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            455 89999999999999999999999999999999998888777776542    2388899999999999999999999


Q ss_pred             hcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCC-eEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+..+.        
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~--------  165 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY--------  165 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC--------
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC--------
Confidence            99999999999998653 667788999999999999999999999999999877778 99999998876553        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.|+  .+|+||+|+||+|+|++...
T Consensus       166 ----------------------------------~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          166 ----------------------------------PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence                                              567899999999999999999998  58999999999999998532


Q ss_pred             C---------------CCCChhhhhccceeeccc
Q 023896          239 A---------------GILSVEEGAESPVKLALL  257 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~  257 (275)
                      .               ...+|++.++.+++++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~  245 (272)
T 2nwq_A          212 RFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQ  245 (272)
T ss_dssp             --------------CCCCBCHHHHHHHHHHHHTS
T ss_pred             ccccchHHHHHhhccCCCCCHHHHHHHHHHHhCC
Confidence            1               124677777777666553

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-38  Score=269.03  Aligned_cols=189  Identities=21%  Similarity=0.155  Sum_probs=165.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|++++++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG---QCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS---EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC---ceEEEECCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888888777765432   388899999999999999999988


Q ss_pred             h-cCCccEEEcCCc--cc-----ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           83 Q-FGKLDILTKGDA--EV-----DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        83 ~-~g~id~li~~ag--~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      . +|++|+||||||  ..     ...++.+.+.++|++.+++|+.+++++++.+.|.|.+++.|+||++||..+..+   
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  155 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY---  155 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC---
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC---
Confidence            6 899999999995  32     234555778899999999999999999999999998777799999999876543   


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              .+...|++||++++.+++.++.|+  .+|+||+|+||+|+
T Consensus       156 ----------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (260)
T 2qq5_A          156 ----------------------------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQ  195 (260)
T ss_dssp             ----------------------------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSC
T ss_pred             ----------------------------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccc
Confidence                                                    235789999999999999999998  58999999999999


Q ss_pred             cCCcC
Q 023896          233 TDINF  237 (275)
Q Consensus       233 T~~~~  237 (275)
                      |++..
T Consensus       196 T~~~~  200 (260)
T 2qq5_A          196 TELLK  200 (260)
T ss_dssp             TTTC-
T ss_pred             cHHHH
Confidence            99864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.9e-37  Score=267.13  Aligned_cols=221  Identities=19%  Similarity=0.195  Sum_probs=187.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++.      .++.++++|+++.++++++++++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG------NRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHH
Confidence            467789999999999999999999999999999999999998888777762      23889999999999999999999


Q ss_pred             HhhcCCccEEEcC-Ccccccchh-----hccchhHHHHhHHhhcccHHHHHHHHhhhhhc------CCCCeEEEEecCcc
Q 023896           81 KTQFGKLDILTKG-DAEVDWSKV-----CYQTYELAVECLKTNYYGTKQTCEALIPLLEL------SDSPRLVNLSSYVS  148 (275)
Q Consensus        81 ~~~~g~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~------~~~g~iv~vsS~~~  148 (275)
                       ++++++|++||| +|......+     .+.+.++|++.+++|+.+++++++.+++.|.+      ++.|+||++||..+
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             -HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence             889999999999 555443332     25688899999999999999999999999976      45689999999888


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEee
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCV  226 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v  226 (275)
                      ..+.                                          ++...|++||++++++++.++.|+  .+|+||+|
T Consensus       178 ~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v  215 (281)
T 3ppi_A          178 YEGQ------------------------------------------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTI  215 (281)
T ss_dssp             TSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             cCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            7654                                          678899999999999999999998  58999999


Q ss_pred             cCCeeecCCcCC----------------CCCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          227 CPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       227 ~pG~v~T~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      +||+|+|++...                ....+|++.++.++.++..  ...+|..+..++.
T Consensus       216 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG  275 (281)
T 3ppi_A          216 APGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGA  275 (281)
T ss_dssp             EECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTT
T ss_pred             ecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCC
Confidence            999999987543                1235889999888887764  3467777666553

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.9e-38  Score=272.75  Aligned_cols=189  Identities=28%  Similarity=0.358  Sum_probs=165.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+ .+...+++...+..   +.++++|+++.++++++++++
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCC---eEEEEcCCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998764 45555666554333   888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|+  +.|+||++||..+..+.        
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~--------  171 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKA--------  171 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSS--------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCC--------
Confidence            99999999999999987777777889999999999999999999999999993  46899999998876543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                       +++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       172 ---------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  216 (283)
T 1g0o_A          172 ---------------------------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY  216 (283)
T ss_dssp             ---------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH
T ss_pred             ---------------------------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhh
Confidence                                             1236789999999999999999998  589999999999999874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.1e-37  Score=266.33  Aligned_cols=182  Identities=20%  Similarity=0.218  Sum_probs=158.4

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +|++++|++|||||++|||++++++|+++|++|++++|+.+.        ...   .  +..+.+|++++++++++++++
T Consensus         2 ~m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~---~--~~~~~~D~~d~~~~~~~~~~~   68 (250)
T 2fwm_X            2 HMDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY---P--FATEVMDVADAAQVAQVCQRL   68 (250)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC---S--SEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC---C--ceEEEcCCCCHHHHHHHHHHH
Confidence            356889999999999999999999999999999999998751        111   1  678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .++++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.        
T Consensus        69 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  140 (250)
T 2fwm_X           69 LAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR--------  140 (250)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC--------
Confidence            999999999999999877666777899999999999999999999999999988778999999998876553        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.|+  .+|+||+|+||+++|++..
T Consensus       141 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  185 (250)
T 2fwm_X          141 ----------------------------------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR  185 (250)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccc
Confidence                                              667899999999999999999998  5899999999999999853

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1e-36  Score=262.64  Aligned_cols=222  Identities=19%  Similarity=0.152  Sum_probs=181.0

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ..+++|++|||||+  +|||++++++|+++|++|++++|+....+. .+++......   +.++++|+++++++++++++
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGS---ELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTC---CCEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCC---cEEEECCCCCHHHHHHHHHH
Confidence            35679999999999  999999999999999999999999654433 3444333332   77899999999999999999


Q ss_pred             HHhhcCCccEEEcCCccccc----chhhc-cchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           80 IKTQFGKLDILTKGDAEVDW----SKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      +.+++++||+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.  
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~--  161 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAI--  161 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC--
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCC--
Confidence            99999999999999998664    34444 789999999999999999999999999974  5799999998877654  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||+++++|++.++.++  .+|+||+|+||+|+
T Consensus       162 ----------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  201 (271)
T 3ek2_A          162 ----------------------------------------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIK  201 (271)
T ss_dssp             ----------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-
T ss_pred             ----------------------------------------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence                                                    677899999999999999999998  58999999999999


Q ss_pred             cCCcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          233 TDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       233 T~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |++....                 ...+|++.++.++.++.......+|..+..+.
T Consensus       202 T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdg  257 (271)
T 3ek2_A          202 TLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDS  257 (271)
T ss_dssp             ----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEEST
T ss_pred             chhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECC
Confidence            9986432                 13578888888887776555556677666554

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6e-37  Score=261.90  Aligned_cols=223  Identities=25%  Similarity=0.292  Sum_probs=186.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|++|||||++|||++++++|+++|++|+++ .|+.++.+...+++...+..   +..+.+|+++.++++++++++
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~   79 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---AFSIGANLESLHGVEALYSSL   79 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCc---eEEEecCcCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999885 67778888888887765433   888999999999999999998


Q ss_pred             HhhcC------CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           81 KTQFG------KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        81 ~~~~g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      .+.++      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.  
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~--  155 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISL--  155 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCC--
T ss_pred             HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCC--
Confidence            88764      4999999999887777778899999999999999999999999999943  4799999998877654  


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeee
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVK  232 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~  232 (275)
                                                              ++...|++||++++.+++.++.++  .+|+||+|+||+|+
T Consensus       156 ----------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (255)
T 3icc_A          156 ----------------------------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVK  195 (255)
T ss_dssp             ----------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             ----------------------------------------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeec
Confidence                                                    678899999999999999999998  68999999999999


Q ss_pred             cCCcCCCC-----------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          233 TDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       233 T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |++.....                 ..+|++.++..+.++.......+|..+..+.
T Consensus       196 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          196 TDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             CSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence            99875431                 2256666666666555444455666655544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.5e-36  Score=256.35  Aligned_cols=219  Identities=25%  Similarity=0.207  Sum_probs=180.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ...+|++|||||+||||++++++|+++|++|++++|+..+++...+++.       ++.++++|+++.++++++++++.+
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   74 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALPLPGDVREEGDWARAVAAMEE   74 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------hceEEEecCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999887766655432       278899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.          
T Consensus        75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  144 (234)
T 2ehd_A           75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF----------  144 (234)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC----------
Confidence            9999999999999877667777899999999999999999999999999988778999999998776543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|+++|++++.+++.++.++  .++++|+|+||+++|++.....
T Consensus       145 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  192 (234)
T 2ehd_A          145 --------------------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP  192 (234)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------
T ss_pred             --------------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc
Confidence                                            567899999999999999999998  5899999999999999864321


Q ss_pred             ----CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          241 ----ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       241 ----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                          ..++++.++.++.++..+.....+......
T Consensus       193 ~~~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~  226 (234)
T 2ehd_A          193 GQAWKLKPEDVAQAVLFALEMPGHAMVSEIELRP  226 (234)
T ss_dssp             -----CCHHHHHHHHHHHHHSCCSSCCCEEECCC
T ss_pred             cccCCCCHHHHHHHHHHHhCCCcccccceEEEee
Confidence                478999999988888766666666655443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=258.57  Aligned_cols=221  Identities=25%  Similarity=0.230  Sum_probs=189.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      ++|++|||||++|||++++++|+++|+       +|++++|+..+.+...+++...+.   ++.++++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA---LTDTITADISDMADVRRLT   77 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC---EEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC---eeeEEEecCCCHHHHHHHH
Confidence            368999999999999999999999999       999999999888877777764432   3889999999999999999


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      +++.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.     
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  152 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-----  152 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC-----
Confidence            999999999999999999877777777899999999999999999999999999987777899999998876543     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           ++...|++||++++.+++.++.++  .+++||+|+||+|.|++
T Consensus       153 -------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (244)
T 2bd0_A          153 -------------------------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  195 (244)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             -------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence                                                 567899999999999999999997  58999999999999998


Q ss_pred             cCCC------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          236 NFHA------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       236 ~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ....      ...++++.++.++.++..+.....+..+..+
T Consensus       196 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  236 (244)
T 2bd0_A          196 WGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRP  236 (244)
T ss_dssp             TCCCCSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             hhhccccccccCCCHHHHHHHHHHHHhCCccccchheEEec
Confidence            6542      2467888888888777665555555544443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-37  Score=270.02  Aligned_cols=191  Identities=24%  Similarity=0.249  Sum_probs=161.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-----hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-----EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+     .++++...+.+...+..   +.++++|++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~---~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVD---LRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCC---EEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHH
Confidence            45789999999999999999999999999999998876     34445555555444332   88999999999999999


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++++.+++|++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||+.+..+.    
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----  153 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----  153 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----
Confidence            9999999999999999999988778888899999999999999999999999999998888999999998876332    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                           .++...|++||++++++++.++.|+  .+|+||+|+||+|.|+
T Consensus       154 -------------------------------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          154 -------------------------------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             -------------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             -------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence                                                 1556789999999999999999998  5899999999999977


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      +.
T Consensus       197 ~~  198 (324)
T 3u9l_A          197 TN  198 (324)
T ss_dssp             --
T ss_pred             ch
Confidence            53

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2e-37  Score=267.86  Aligned_cols=222  Identities=25%  Similarity=0.299  Sum_probs=182.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++|++|||||++|||++++++|+++|++|+++ .|+.+..+...+++...+..   +.++++|+++.++++++++++.+.
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE---AVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999876 78888888887777665433   889999999999999999999999


Q ss_pred             cCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC---CCCeEEEEecCccccCCCcHHHHh
Q 023896           84 FGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS---DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        84 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ++++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+.   +.|+||++||..+..+.       
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  174 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-------  174 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-------
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-------
Confidence            9999999999998664 567778999999999999999999999999999763   45799999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++....|++||++++.+++.++.++  .+|+||+|+||+|+|++..
T Consensus       175 ----------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  220 (272)
T 4e3z_A          175 ----------------------------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHA  220 (272)
T ss_dssp             ----------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             ----------------------------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccc
Confidence                                              1356789999999999999999998  5899999999999999853


Q ss_pred             CC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                ...+|++.++.++.++.......+|..+..+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          221 SGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVS  269 (272)
T ss_dssp             -------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeec
Confidence            21                0234788888877776655555666666554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-38  Score=271.75  Aligned_cols=185  Identities=26%  Similarity=0.355  Sum_probs=163.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++.       .+.++++|++++++++++++++.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCeEEEcCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999987766655432       17789999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +++|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|+++ .++||++||..+..+.        
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~--------  148 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ--------  148 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC--------
Confidence            999999999999998643 556678899999999999999999999999999765 4899999997766443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       149 ----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~  192 (270)
T 1yde_A          149 ----------------------------------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW  192 (270)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             ----------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchh
Confidence                                              567889999999999999999998  589999999999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.7e-36  Score=260.01  Aligned_cols=225  Identities=24%  Similarity=0.230  Sum_probs=189.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++| +.++.+...+++...+.   ++.++++|+++++++.+++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   78 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIAVKGDVTVESDVINLVQS   78 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999999 87777777777765432   378899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      +.+.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.      
T Consensus        79 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~------  152 (261)
T 1gee_A           79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW------  152 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC------
Confidence            999999999999999987766667788999999999999999999999999998776 6899999998776543      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                          ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       153 ------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  196 (261)
T 1gee_A          153 ------------------------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             ------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             ------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh
Confidence                                                667899999999999999999998  589999999999999974


Q ss_pred             CCC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 FHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...                 ...+|++.++.++.++.......+|..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  247 (261)
T 1gee_A          197 AEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_dssp             HHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEc
Confidence            211                 1347788888877766544444556555544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.3e-37  Score=263.93  Aligned_cols=191  Identities=25%  Similarity=0.266  Sum_probs=157.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...+.   ++.++.+|+++.++++++++++.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF---QVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eeEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888887777765533   28889999999999999999999


Q ss_pred             hhc-CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|++++.++||++||..+..+.        
T Consensus        87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  158 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA--------  158 (266)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------
T ss_pred             HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC--------
Confidence            999 89999999999877666667889999999999999999999999999987777899999998776443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++...|+++|++++.+++.++.++  .+++||+|+||++.|++..
T Consensus       159 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (266)
T 1xq1_A          159 ----------------------------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE  203 (266)
T ss_dssp             ------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence                                              556789999999999999999998  5899999999999999754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=8.9e-38  Score=269.69  Aligned_cols=224  Identities=20%  Similarity=0.202  Sum_probs=177.6

Q ss_pred             CcccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhHH-HHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         1 m~~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      |+++++|++|||||  ++|||++++++|+++|++|++++|+..+. +...+++   +   .++.++++|+++++++++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---P---AKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---S---SCCCEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---C---CCceEEEccCCCHHHHHHHH
Confidence            44688999999999  99999999999999999999999998653 3332222   1   13778999999999999999


Q ss_pred             HHHHhhcC---CccEEEcCCcccc-----cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           78 DFIKTQFG---KLDILTKGDAEVD-----WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        78 ~~~~~~~g---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      +++.+.+|   ++|+||||||...     ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+ 
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-  152 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-  152 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-
T ss_pred             HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-
Confidence            99999999   9999999999865     345667889999999999999999999999999965  379999999664 


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~  227 (275)
                      .+.                                          +.+..|++||++++.++++++.|+  .+||||+|+
T Consensus       153 ~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~  190 (269)
T 2h7i_A          153 RAM------------------------------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVA  190 (269)
T ss_dssp             SCC------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             ccc------------------------------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEe
Confidence            222                                          567889999999999999999998  589999999


Q ss_pred             CCeeecCCcCCC--CCCChh----------h-hhcccee-ecccCCCCCcceEeccCcccCC
Q 023896          228 PGFVKTDINFHA--GILSVE----------E-GAESPVK-LALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       228 pG~v~T~~~~~~--~~~~~~----------~-~a~~~~~-~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ||+|+|++....  .....+          . ....+++ ++.+|++.+....|+.++.++|
T Consensus       191 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~  252 (269)
T 2h7i_A          191 AGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPA  252 (269)
T ss_dssp             ECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTT
T ss_pred             cCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhcc
Confidence            999999975321  000110          0 0123455 4566666666666776665543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.4e-37  Score=263.77  Aligned_cols=180  Identities=22%  Similarity=0.353  Sum_probs=162.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+           .   .++.++++|+++.++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~---~~~~~~~~Dl~~~~~v~~~~~~~   68 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------E---AKYDHIECDVTNPDQVKASIDHI   68 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------S---CSSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------C---CceEEEEecCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998754           1   22788999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+++|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.        
T Consensus        69 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  140 (264)
T 2dtx_A           69 FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT--------  140 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC--------
Confidence            999999999999999877777777899999999999999999999999999988778999999998876543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.++ +.|+||+|+||+++|++.
T Consensus       141 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~  183 (264)
T 2dtx_A          141 ----------------------------------KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV  183 (264)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch
Confidence                                              667899999999999999999998 349999999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.5e-36  Score=260.98  Aligned_cols=220  Identities=23%  Similarity=0.242  Sum_probs=179.2

Q ss_pred             ccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.+ .+...+++......   +.++++|++++++++++++++
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG---ALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC---CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC---cEEEECCCCCHHHHHHHHHHH
Confidence            4679999999999  99999999999999999999999985 34444555443222   678899999999999999999


Q ss_pred             HhhcCCccEEEcCCccccc----chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDW----SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++++.|.|++  .|+||++||..+..+.    
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~----  154 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVV----  154 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBC----
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCC----
Confidence            9999999999999998653    45667889999999999999999999999999964  4799999998776543    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||++++.+++.++.++  .+|+||+|+||+|+|+
T Consensus       155 --------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  196 (261)
T 2wyu_A          155 --------------------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTV  196 (261)
T ss_dssp             --------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCT
T ss_pred             --------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCc
Confidence                                                  567889999999999999999998  5899999999999999


Q ss_pred             CcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          235 INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       235 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +....                 ...+|++.++.++.++.......+|..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  249 (261)
T 2wyu_A          197 AARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVD  249 (261)
T ss_dssp             GGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence            75321                 1246777777766665543334445544433

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.9e-37  Score=265.49  Aligned_cols=214  Identities=25%  Similarity=0.252  Sum_probs=172.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++++              .+.++++|++++++++++++++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------------cceEEEecCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999875321              16788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.         
T Consensus        83 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  153 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS---------  153 (253)
T ss_dssp             HHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC---------
Confidence            99999999999999877666777889999999999999999999999999987777899999998876543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.|+  .+|+||+|+||+|+|++....
T Consensus       154 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (253)
T 2nm0_A          154 ---------------------------------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL  200 (253)
T ss_dssp             ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------
T ss_pred             ---------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence                                             345689999999999999999998  589999999999999985421


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...+|++.++.++.++..+....+|..+..+.
T Consensus       201 ~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          201 TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             ---CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence                           12466777777666665444455666655543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-36  Score=262.15  Aligned_cols=225  Identities=24%  Similarity=0.255  Sum_probs=187.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.   ++.++++|+++.++++++++++.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY---ESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC---ceeEEECCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999888887777765433   28889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.         
T Consensus       117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  187 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------  187 (285)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---------
Confidence            99999999999999877666777889999999999999999999999999987777899999998766443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  .+|+||+|+||+++|++....
T Consensus       188 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  234 (285)
T 2c07_A          188 ---------------------------------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI  234 (285)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred             ---------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc
Confidence                                             567899999999999999999998  589999999999999975421


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...++++.++.++.++..+....+|..+..+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          235 SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence                           12467777877777665444445566665543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=5.2e-36  Score=256.67  Aligned_cols=224  Identities=24%  Similarity=0.276  Sum_probs=187.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...+..   +.++++|+++.++++++++++.
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---VSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999998888777777654332   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++++.++||++||..+..+.        
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  157 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN--------  157 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC--------
Confidence            99999999999999866 555667789999999999999999999999999987777899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC--chhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS--SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++.  ..|+++|++++.+++.++.++  .+|+||+|+||+|+|++.
T Consensus       158 ----------------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  203 (260)
T 3awd_A          158 ----------------------------------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT  203 (260)
T ss_dssp             ----------------------------------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             ----------------------------------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence                                              333  789999999999999999997  589999999999999986


Q ss_pred             C-CC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 F-HA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~-~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      . ..                ...++++.++.++.++.......+|..+..+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  254 (260)
T 3awd_A          204 RFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVD  254 (260)
T ss_dssp             HHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEEC
Confidence            4 10                1347777787777766544444555554443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-37  Score=260.99  Aligned_cols=182  Identities=23%  Similarity=0.285  Sum_probs=159.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++... ++    .   ++.++++|++++++++    ++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~---~~~~~~~D~~~~~~~~----~~   68 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----P---GIQTRVLDVTKKKQID----QF   68 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----T---TEEEEECCTTCHHHHH----HH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----c---CceEEEeeCCCHHHHH----HH
Confidence            77899999999999999999999999999999999999987654432 21    1   3788999999999977    44


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.        
T Consensus        69 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  140 (246)
T 2ag5_A           69 ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG--------  140 (246)
T ss_dssp             HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--------
T ss_pred             HHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC--------
Confidence            556789999999999877777778899999999999999999999999999987777899999998876543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCC-CCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        + +...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.
T Consensus       141 ----------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  185 (246)
T 2ag5_A          141 ----------------------------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL  185 (246)
T ss_dssp             ----------------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHH
T ss_pred             ----------------------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcch
Confidence                                              3 67889999999999999999998  589999999999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-36  Score=258.85  Aligned_cols=217  Identities=22%  Similarity=0.202  Sum_probs=168.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.++|++|||||++|||++++++|+++|++|++++|+.++++...+++..      ++.+..+|+++.+++.+++++   
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~---   81 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD------NYTIEVCNLANKEECSNLISK---   81 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS------SEEEEECCTTSHHHHHHHHHT---
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc------CccEEEcCCCCHHHHHHHHHh---
Confidence            56799999999999999999999999999999999999988887766632      288899999999998777654   


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                       ++++|++|||||......+.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.          
T Consensus        82 -~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  150 (249)
T 3f9i_A           82 -TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN----------  150 (249)
T ss_dssp             -CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC----------
T ss_pred             -cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC----------
Confidence             478999999999877766667788999999999999999999999999988778999999998887654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++.....
T Consensus       151 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  198 (249)
T 3f9i_A          151 --------------------------------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN  198 (249)
T ss_dssp             --------------------------------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC
T ss_pred             --------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC
Confidence                                            677899999999999999999998  5899999999999999864321


Q ss_pred             ---------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          241 ---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       241 ---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ..++++.++.++.++.......+|..+..+.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  244 (249)
T 3f9i_A          199 EKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNG  244 (249)
T ss_dssp             HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence                           2357777777777666555555666665543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7.4e-36  Score=254.40  Aligned_cols=224  Identities=24%  Similarity=0.240  Sum_probs=186.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...    .++.++++|++++++++++++++
T Consensus         1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   76 (251)
T 1zk4_A            1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998877776665432    23889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.       
T Consensus        77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  149 (251)
T 1zk4_A           77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-------  149 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-------
Confidence            999999999999999877666777889999999999999999999999999987766 799999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~  235 (275)
                                                         ++...|+++|++++.+++.++.++    .+|++|+|+||+++|++
T Consensus       150 -----------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~  194 (251)
T 1zk4_A          150 -----------------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             -----------------------------------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence                                               567899999999999999999885    58999999999999987


Q ss_pred             cCCCC----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          236 NFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       236 ~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .....                ..++++.++.++.++.......+|..+..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  245 (251)
T 1zk4_A          195 VDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVD  245 (251)
T ss_dssp             HHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEEC
Confidence            43210                235677776666655544333455555443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-36  Score=261.08  Aligned_cols=214  Identities=21%  Similarity=0.246  Sum_probs=186.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...+.   ++.++++|+++.++++++++++
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA---KVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC---eEEEEEeeCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999888888777766543   3889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.        
T Consensus       103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  174 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--------  174 (272)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH--------
T ss_pred             HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--------
Confidence            999999999999999877666667788999999999999999999999999988778899999998876542        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCCeeecCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG~v~T~~  235 (275)
                                                        ++...|+++|++++.+++.++.++     ++|+||+|+||+|+|++
T Consensus       175 ----------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          175 ----------------------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             ----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence                                              345789999999999999999996     38999999999999998


Q ss_pred             cCC-----CCCCChhhhhccceeecccCC
Q 023896          236 NFH-----AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       236 ~~~-----~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ...     ....++++.++.++..+..+.
T Consensus       221 ~~~~~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          221 IKNPSTSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             TTCTHHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             cccccccccCCCCHHHHHHHHHHHHHcCC
Confidence            542     135789999988887776544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=7.3e-37  Score=260.86  Aligned_cols=214  Identities=20%  Similarity=0.222  Sum_probs=172.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.+.              +..+++|++++++++++++++.
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------------LFGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------SEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------------hcCeeccCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999998753221              2248899999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.         
T Consensus        77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  147 (247)
T 1uzm_A           77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------  147 (247)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC---------
Confidence            99999999999999877666778899999999999999999999999999988777999999998877543         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+++|++....
T Consensus       148 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  194 (247)
T 1uzm_A          148 ---------------------------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  194 (247)
T ss_dssp             ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             ---------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc
Confidence                                             567899999999999999999998  589999999999999874321


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...+|++.++.++.++.......+|..+..+.
T Consensus       195 ~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg  241 (247)
T 1uzm_A          195 DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDG  241 (247)
T ss_dssp             CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECC
Confidence                           12466777777666655433445555555443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2e-36  Score=257.38  Aligned_cols=224  Identities=23%  Similarity=0.279  Sum_probs=169.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |++++|++|||||++|||++++++|+++|++|+++ .|+....+...+++...+.   ++.++++|+++.++++++++++
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI---NVVVAKGDVKNPEDVENMVKTA   77 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC---CEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999998 6777777777777765433   2888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.        
T Consensus        78 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  149 (247)
T 2hq1_A           78 MDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN--------  149 (247)
T ss_dssp             HHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC--------
Confidence            999999999999999876666667788999999999999999999999999987777899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .++++|+|+||+++|++...
T Consensus       150 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          150 ----------------------------------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             ------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             ----------------------------------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence                                              557889999999999999999998  58999999999999986432


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .               ...++++.++.++.++..+....+|..|..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  242 (247)
T 2hq1_A          196 LPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINID  242 (247)
T ss_dssp             SCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeC
Confidence            1               1346777777777665544344455555443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.2e-35  Score=254.09  Aligned_cols=263  Identities=39%  Similarity=0.607  Sum_probs=200.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++|++|||||++|||++++++|++ +|++|++++|+..+.+...+++...+.   ++.++.+|+++.++++++++++.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL---SPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC---eeEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999 999999999999888888887766533   378899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccc-hhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccC--CCcHHHHh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQT-YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK--DLPEKARA  159 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~--~~~~~~~~  159 (275)
                      .++++|+||||||....... ..+ .+++++.+++|+.++++++++++|.|++  .++||++||..+..+  ..++....
T Consensus        79 ~~g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             hcCCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHh
Confidence            99999999999997654322 223 5889999999999999999999999865  379999999877632  11122222


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC------CCeEEEeecCCeeec
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY------PKFCVNCVCPGFVKT  233 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~------~~i~vn~v~pG~v~T  233 (275)
                      .+.. ...++++.......+......+.....++ + ...|++||++++.+++.++.++      .+|+||+|+||+|.|
T Consensus       156 ~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t  232 (276)
T 1wma_A          156 KFRS-ETITEEELVGLMNKFVEDTKKGVHQKEGW-P-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  232 (276)
T ss_dssp             HHHC-SSCCHHHHHHHHHHHHHHHHTTCTTTTTC-C-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             hccc-cccchhhhhhhhhhhhhhhcccccccCCC-c-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence            2222 12233333322222222211111111111 2 3789999999999999999997      389999999999999


Q ss_pred             CCcCCCCCCChhhhhccceeecccCC--CCCcceEeccCcccCC
Q 023896          234 DINFHAGILSVEEGAESPVKLALLPD--GGPTGRFFLRKEEAPF  275 (275)
Q Consensus       234 ~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~a~~  275 (275)
                      ++.......++++.++.++.++..+.  ...+|.+|..+...+|
T Consensus       233 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~~~  276 (276)
T 1wma_A          233 DMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  276 (276)
T ss_dssp             TTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             CcCCccccCChhHhhhhHhhhhcCcccccccCceEeccCceecC
Confidence            99876667899999999998887563  4678988887666554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.9e-36  Score=257.38  Aligned_cols=227  Identities=22%  Similarity=0.208  Sum_probs=183.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC----CCCceeEEEecccChHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV----DPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      .++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++...+.    ...++.++++|+++.+++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            357899999999999999999999999999999999999887776655543220    0023788999999999999999


Q ss_pred             HHHHhhcCCc-cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcH
Q 023896           78 DFIKTQFGKL-DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        78 ~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~  155 (275)
                      +++.+.++++ |+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||..+..+.   
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  159 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---  159 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---
Confidence            9999999999 9999999987776777788999999999999999999999999998765 6899999998766543   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|+++|++++.+++.++.++  .++++|+|+||++.|
T Consensus       160 ---------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  200 (264)
T 2pd6_A          160 ---------------------------------------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIAT  200 (264)
T ss_dssp             ---------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             ---------------------------------------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccc
Confidence                                                   567899999999999999999997  589999999999999


Q ss_pred             CCcCCC---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          234 DINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       234 ~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ++....               ...++++.++.++.++........|..+..+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  252 (264)
T 2pd6_A          201 PMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVT  252 (264)
T ss_dssp             CC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence            975321               1236777777777666543334555555444

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.9e-36  Score=254.10  Aligned_cols=222  Identities=23%  Similarity=0.279  Sum_probs=186.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+..+++...+++....  ..++.++++|++++++++++++++.+.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999988877776662211  12388899999999999999999999999


Q ss_pred             CccEEEcCCcccccch---hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           86 KLDILTKGDAEVDWSK---VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        86 ~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++|+||||||.....+   +.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.          
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  149 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF----------  149 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence            9999999999866555   667789999999999999999999999999987777899999998776543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-C
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-A  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-~  239 (275)
                                                      ++...|+++|++++.+++.++.++  .+++||+|+||+|+|++... .
T Consensus       150 --------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~  197 (250)
T 2cfc_A          150 --------------------------------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL  197 (250)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc
Confidence                                            567899999999999999999998  58999999999999997532 0


Q ss_pred             ----------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                      ...++++.++.++.++..+....+|..+..+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          198 DQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG  245 (250)
T ss_dssp             TSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECC
Confidence                            02367777777777666554455666665543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7.1e-36  Score=253.94  Aligned_cols=223  Identities=26%  Similarity=0.247  Sum_probs=186.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHh-cCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.+...+++.. .+.   ++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV---KAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC---ceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888777766654 222   28889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.         
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  151 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN---------  151 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC---------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC---------
Confidence            99999999999999877666677889999999999999999999999999987777899999997665443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|++++.+++.++.++  .++++|+|+||+++|++....
T Consensus       152 ---------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~  198 (248)
T 2pnf_A          152 ---------------------------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL  198 (248)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             ---------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc
Confidence                                             557889999999999999999998  589999999999999975321


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                     ...++++.++.++.++.......+|..|..+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  244 (248)
T 2pnf_A          199 SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVN  244 (248)
T ss_dssp             CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeC
Confidence                           1246777777777666543334455555444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=6.6e-36  Score=256.71  Aligned_cols=219  Identities=21%  Similarity=0.209  Sum_probs=180.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++   +   .++.++++|++++++++++++++.
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G---NNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---C---TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---C---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998877776665   1   128899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhh------ccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------CCCeEEEEecCccc
Q 023896           82 TQFGKLDILTKGDAEVDWSKVC------YQTYELAVECLKTNYYGTKQTCEALIPLLELS------DSPRLVNLSSYVSA  149 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~~~  149 (275)
                      +.++++|+||||||.....++.      +.+.++|++.+++|+.+++.+++++.|.|+++      +.++||++||..+.
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  161 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  161 (265)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence            9999999999999986554433      26788999999999999999999999999876      56899999998766


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~  227 (275)
                      .+.                                          ++...|+++|++++.+++.++.++  .+|+||+|+
T Consensus       162 ~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  199 (265)
T 2o23_A          162 EGQ------------------------------------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA  199 (265)
T ss_dssp             HCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             CCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEE
Confidence            443                                          567899999999999999999998  589999999


Q ss_pred             CCeeecCCcCCC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          228 PGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       228 pG~v~T~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ||+|+|++....                ...++++.++.++.++..  ...+|..+..+
T Consensus       200 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~i~vd  256 (265)
T 2o23_A          200 PGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRLD  256 (265)
T ss_dssp             ECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             eccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhc--CccCceEEEEC
Confidence            999999975321                123677788777776642  23455554443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-36  Score=254.10  Aligned_cols=227  Identities=25%  Similarity=0.339  Sum_probs=180.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++|++|||||++|||++++++|+++|  ++|++++|+..+.+...    ..  ...++.++.+|+++.++++++++++.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI--KDSRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC--CCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH----hc--cCCceEEEEeecCCHHHHHHHHHHHH
Confidence            357999999999999999999999999  99999999988765432    22  12248899999999999999999999


Q ss_pred             hhcC--CccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------C-----CCeEEEEecCc
Q 023896           82 TQFG--KLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS------D-----SPRLVNLSSYV  147 (275)
Q Consensus        82 ~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~-----~g~iv~vsS~~  147 (275)
                      +.++  ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|+++      +     .++||++||..
T Consensus        75 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             HhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            9998  9999999999876 6666677899999999999999999999999999765      4     68999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +..+..+                                   ...+.++...|++||++++.+++.++.++  .+++||+
T Consensus       155 ~~~~~~~-----------------------------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  199 (250)
T 1yo6_A          155 GSITDNT-----------------------------------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVN  199 (250)
T ss_dssp             GCSTTCC-----------------------------------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEE
T ss_pred             cccCCcc-----------------------------------cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence            7654210                                   00111456789999999999999999998  5899999


Q ss_pred             ecCCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          226 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       226 v~pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |+||+|+|++.......++++.++.++.++..+....+|.++..++
T Consensus       200 v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          200 FCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             EECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             EcCCceecCCCCCCCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence            9999999999876667899999999998887766667888887654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.1e-35  Score=253.70  Aligned_cols=221  Identities=22%  Similarity=0.248  Sum_probs=185.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCce-eEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL-LFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.++++...+++..      ++ .++++|+++.+++++++++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA------AVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc------cceeEEEEecCCHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999887777666621      25 7889999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+ ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.       
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  151 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-------  151 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-------
Confidence            988 899999999999877766677889999999999999999999999999988777899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC--chhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS--SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                         +..  ..|+++|++++.+++.++.++  .++++|+|+||++.|++
T Consensus       152 -----------------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~  196 (254)
T 2wsb_A          152 -----------------------------------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM  196 (254)
T ss_dssp             -----------------------------------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence                                               334  789999999999999999998  58999999999999987


Q ss_pred             cCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          236 NFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       236 ~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ....                 ...++++.++.++.++.......+|..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  248 (254)
T 2wsb_A          197 TLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVD  248 (254)
T ss_dssp             HHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence            4210                 1347788888877766544444556665544

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.2e-35  Score=257.28  Aligned_cols=192  Identities=21%  Similarity=0.240  Sum_probs=166.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.+...+.+...+.   ++.++++|+++.++++++++++.
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGV---HSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCS---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cceEEEeecCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877766666554332   28889999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc-chhh-ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDW-SKVC-YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++++|+||||||.... .++. +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.       
T Consensus       107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  179 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN-------  179 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC--------
T ss_pred             HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC-------
Confidence            999999999999998665 5555 6788999999999999999999999999987777999999998876441       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ..++...|+++|++++.+++.++.++  .+ +||+|+||+++|++..
T Consensus       180 ---------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          180 ---------------------------------IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             -----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             ---------------------------------CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence                                             01566789999999999999999998  47 9999999999999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.4e-36  Score=253.83  Aligned_cols=213  Identities=15%  Similarity=0.137  Sum_probs=173.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+++   .   .++.++.+|+++.++++++++++.+.   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~~~~~~~~---   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S---NNVGYRARDLASHQEVEQLFEQLDSI---   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S---SCCCEEECCTTCHHHHHHHHHSCSSC---
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h---hccCeEeecCCCHHHHHHHHHHHhhc---
Confidence            68999999999999999999999999999999998877766554   1   23788999999999999998876543   


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      .|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ ++||++||..+..+.              
T Consensus        73 ~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~--------------  137 (230)
T 3guy_A           73 PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPK--------------  137 (230)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCC--------------
T ss_pred             CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCC--------------
Confidence            39999999988777788889999999999999999999999999998765 499999998877554              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-----
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                                  ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....     
T Consensus       138 ----------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~  189 (230)
T 3guy_A          138 ----------------------------AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLD  189 (230)
T ss_dssp             ----------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------
T ss_pred             ----------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCC
Confidence                                        677899999999999999999999  589999999999999986533     


Q ss_pred             --CCCChhhhhccceeecccCC-CCCcceEeccCc
Q 023896          240 --GILSVEEGAESPVKLALLPD-GGPTGRFFLRKE  271 (275)
Q Consensus       240 --~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~  271 (275)
                        ...+|++.++.++.++..+. ...+|+.+..+.
T Consensus       190 ~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~  224 (230)
T 3guy_A          190 TSSFMSAEDAALMIHGALANIGNGYVSDITVNREG  224 (230)
T ss_dssp             ---CCCHHHHHHHHHHHCCEETTEEEEEEEEEC--
T ss_pred             cccCCCHHHHHHHHHHHHhCcCCCCccceeecCCC
Confidence              24688999988888766444 346666655443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=9e-38  Score=277.32  Aligned_cols=190  Identities=15%  Similarity=0.269  Sum_probs=157.7

Q ss_pred             CCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhH---------HHHHHHHHHhcCCCCCceeEEEecccCh--H
Q 023896            5 TKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKR---------GLEAVEKLKASGVDPELLLFHQLDISDL--A   71 (275)
Q Consensus         5 ~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~---------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~--~   71 (275)
                      ++|++|||||++  |||+++|++|+++|++|++++|+...         ++...+.+.........+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  99999999999999999988877632         1111111111111223367888999888  7


Q ss_pred             ------------------HHHHHHHHHHhhcCCccEEEcCCccc--ccchhhccchhHHHHhHHhhcccHHHHHHHHhhh
Q 023896           72 ------------------SVSSLADFIKTQFGKLDILTKGDAEV--DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  131 (275)
Q Consensus        72 ------------------~v~~~~~~~~~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  131 (275)
                                        +++++++++.+++|+||+||||||+.  ...++.+.+.++|++++++|++|++.++++++|.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974  3566778899999999999999999999999999


Q ss_pred             hhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCc-hhhHhHHHHHHH
Q 023896          132 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAY  210 (275)
Q Consensus       132 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~  210 (275)
                      |+++  |+||++||..+..+.                                          ++.. .|++||+|+++|
T Consensus       161 m~~~--g~Iv~isS~~~~~~~------------------------------------------~~~~~~Y~asKaal~~~  196 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVV------------------------------------------PGYGGGMSSAKAALESD  196 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCC------------------------------------------TTCTTTHHHHHHHHHHH
T ss_pred             HhhC--CeEEEEeCccccCCC------------------------------------------CcchHHHHHHHHHHHHH
Confidence            9864  899999998887654                                          5564 899999999999


Q ss_pred             HHHHHHhC-C--CeEEEeecCCeeecCCcCC
Q 023896          211 TRILAKRY-P--KFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       211 ~~~~a~~~-~--~i~vn~v~pG~v~T~~~~~  238 (275)
                      ++.++.|+ +  +|+||+|+||+|+|+|...
T Consensus       197 ~~~la~el~~~~gI~vn~v~PG~v~T~~~~~  227 (329)
T 3lt0_A          197 TRVLAYHLGRNYNIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCCCCHHHHT
T ss_pred             HHHHHHHhCCccCeEEEEEecceeechhHhh
Confidence            99999998 4  8999999999999998654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.4e-35  Score=253.08  Aligned_cols=222  Identities=21%  Similarity=0.257  Sum_probs=185.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||+||||++++++|+++|++|++++|+..+.+...+++...+..   +.++.+|++++++++++++++.+
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCc---eEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888777777654433   88899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.          
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  153 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------  153 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------
T ss_pred             hcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------
Confidence            99999999999998765554 5788999999999999999999999999987777899999998766443          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|+++|++++.+++.++.++  .++++|+|+||++.|++.... 
T Consensus       154 --------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~  201 (255)
T 1fmc_A          154 --------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI  201 (255)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             --------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc
Confidence                                            567899999999999999999998  689999999999999864321 


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                     ...++++.++.++.++.......+|..|..+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  247 (255)
T 1fmc_A          202 TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS  247 (255)
T ss_dssp             CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEEC
Confidence                           1246777777776665543333445444443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=255.54  Aligned_cols=226  Identities=20%  Similarity=0.267  Sum_probs=191.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC---CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g---~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      .+++|++|||||++|||++++++|+++|   ++|++++|+..+.+.. +++.....   ++.++.+|+++.+++++++++
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHS---NIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCT---TEEEEECCTTCGGGHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCC---ceEEEEecCCChHHHHHHHHH
Confidence            4578999999999999999999999999   9999999998765543 44433322   388999999999999999999


Q ss_pred             HHhhcC--CccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------C-----CCeEEEEec
Q 023896           80 IKTQFG--KLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS------D-----SPRLVNLSS  145 (275)
Q Consensus        80 ~~~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~-----~g~iv~vsS  145 (275)
                      +.+.++  ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .++||++||
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence            999998  8999999999876 5666678899999999999999999999999999765      3     589999999


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV  223 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v  223 (275)
                      ..+..+.                                       ...++...|+++|++++.+++.++.++  .+|+|
T Consensus       174 ~~~~~~~---------------------------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  214 (267)
T 1sny_A          174 ILGSIQG---------------------------------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMC  214 (267)
T ss_dssp             GGGCSTT---------------------------------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             ccccccC---------------------------------------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEE
Confidence            8876542                                       011356789999999999999999998  58999


Q ss_pred             EeecCCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          224 NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       224 n~v~pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |+|+||+|+|++.......++++.++.++..+.......+|.++..++
T Consensus       215 ~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  262 (267)
T 1sny_A          215 VSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG  262 (267)
T ss_dssp             EEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred             EEeCCcceecCCCCCCCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence            999999999999877677899999999999888777777888887554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-35  Score=254.73  Aligned_cols=223  Identities=21%  Similarity=0.233  Sum_probs=185.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++|++|||||++|||++++++|+++|++|++++|+..+++...+++...+.. .++.++++|++++++++++++++
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999998888887777665422 23788899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC--CeEEEEecCccccCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS--PRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+....      
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~------  179 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------  179 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC------
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC------
Confidence            999999999999999877666667789999999999999999999999999987763  899999998765210      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~  234 (275)
                                                        +.++...|+++|++++.+++.++.++    .+|++|+|+||+|+|+
T Consensus       180 ----------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  225 (279)
T 1xg5_A          180 ----------------------------------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  225 (279)
T ss_dssp             ----------------------------------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----------------------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence                                              11456789999999999999999985    4899999999999999


Q ss_pred             CcCC---------------CCCCChhhhhccceeecccCCCCCcc
Q 023896          235 INFH---------------AGILSVEEGAESPVKLALLPDGGPTG  264 (275)
Q Consensus       235 ~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~  264 (275)
                      +...               ....++++.++.++.++..+.....+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g  270 (279)
T 1xg5_A          226 FAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIG  270 (279)
T ss_dssp             HHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             hhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcceEee
Confidence            7311               12356777777777766655443333

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.6e-36  Score=284.85  Aligned_cols=218  Identities=20%  Similarity=0.227  Sum_probs=179.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++.+|..  ++...+++...+..   ...+.+|++  .+.+++++++.
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~---~~~~~~Dv~--~~~~~~~~~~~  390 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGE---AWPDQHDVA--KDSEAIIKNVI  390 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCE---EEEECCCHH--HHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCe---EEEEEcChH--HHHHHHHHHHH
Confidence            367899999999999999999999999999999998643  34455566554332   667788884  45678889999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||+....++.+.+.++|++.|++|+.|+|+++|+++|+|++++.|+|||+||.++..+.         
T Consensus       391 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~---------  461 (604)
T 2et6_A          391 DKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN---------  461 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---------
Confidence            99999999999999877777778899999999999999999999999999988878999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||+|+.+|+++++.|+  .+||||+|+||+ +|+|....
T Consensus       462 ---------------------------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~  507 (604)
T 2et6_A          462 ---------------------------------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI  507 (604)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----
T ss_pred             ---------------------------------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc
Confidence                                             677899999999999999999998  589999999996 99986431


Q ss_pred             ------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                            ...+|++.+..+++++..... .+|..+..+
T Consensus       508 ~~~~~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~vd  543 (604)
T 2et6_A          508 MREQDKNLYHADQVAPLLVYLGTDDVP-VTGETFEIG  543 (604)
T ss_dssp             -----CCSSCGGGTHHHHHHTTSTTCC-CCSCEEEEE
T ss_pred             CchhhccCCCHHHHHHHHHHHhCCccC-CCCcEEEEC
Confidence                  235788888877776654444 566665543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5e-35  Score=252.92  Aligned_cols=223  Identities=21%  Similarity=0.239  Sum_probs=185.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+....+...+++...    .++.++++|++++++++++++++.
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC----CceEEEECCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999988776666655321    138899999999999999999999


Q ss_pred             hhcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.       
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  160 (278)
T 2bgk_A           88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------  160 (278)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------
T ss_pred             HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-------
Confidence            999999999999997642  45567788999999999999999999999999988777899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCC-CCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                         + +...|+++|++++.+++.++.++  .+|++|+|+||++.|++.
T Consensus       161 -----------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (278)
T 2bgk_A          161 -----------------------------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  205 (278)
T ss_dssp             -----------------------------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             -----------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhh
Confidence                                               3 56789999999999999999997  589999999999999975


Q ss_pred             CCC--------------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 FHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ...                    ...++++.++.++.++.......+|..|..+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  259 (278)
T 2bgk_A          206 TDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVID  259 (278)
T ss_dssp             TTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEEC
Confidence            421                    1357778887777766544444556555544

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-36  Score=258.88  Aligned_cols=229  Identities=24%  Similarity=0.222  Sum_probs=180.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.....+++.....  .++.++++|+++.++++++++++.
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC--CeeEEEEeeCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999987766655555543211  128889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||..+..+..+      
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  161 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS------  161 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE------
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc------
Confidence            9999999999999987776777789999999999999999999999999997654 489999999877654200      


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                   ...+..+...|+++|++++.+++.++.++  .+|+||+|+||+|+|++...
T Consensus       162 -----------------------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (265)
T 1h5q_A          162 -----------------------------SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH  212 (265)
T ss_dssp             -----------------------------ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             -----------------------------cccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc
Confidence                                         00011336789999999999999999998  58999999999999998643


Q ss_pred             C---------------CCCChhhhhccceeecccCCCCCcceEe
Q 023896          239 A---------------GILSVEEGAESPVKLALLPDGGPTGRFF  267 (275)
Q Consensus       239 ~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  267 (275)
                      .               ...++++.++.++.++..+....+|..+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  256 (265)
T 1h5q_A          213 MDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEY  256 (265)
T ss_dssp             SCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             cchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEE
Confidence            2               1235566666555555433333344433

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=7.4e-36  Score=255.13  Aligned_cols=192  Identities=22%  Similarity=0.287  Sum_probs=168.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |.++++|++|||||+||||++++++|+++|++|++++|+ ..+++...+++...+.   ++.++++|+++++++++++++
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   78 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG---DAAFFAADLATSEACQQLVDE   78 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999999 7777777777765432   388999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcc-cccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--C---CeEEEEecCcccc-CC
Q 023896           80 IKTQFGKLDILTKGDAE-VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--S---PRLVNLSSYVSAL-KD  152 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~---g~iv~vsS~~~~~-~~  152 (275)
                      +.+.++++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.
T Consensus        79 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  158 (258)
T 3afn_B           79 FVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG  158 (258)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC
T ss_pred             HHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC
Confidence            99999999999999997 5556666788899999999999999999999999987543  2   7999999977654 32


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|+++|++++.+++.++.++  .+|+||+|+||+
T Consensus       159 ------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~  196 (258)
T 3afn_B          159 ------------------------------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGT  196 (258)
T ss_dssp             ------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             ------------------------------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCC
Confidence                                                      567899999999999999999998  589999999999


Q ss_pred             eecCCcC
Q 023896          231 VKTDINF  237 (275)
Q Consensus       231 v~T~~~~  237 (275)
                      +.|++..
T Consensus       197 v~t~~~~  203 (258)
T 3afn_B          197 VDTAFHA  203 (258)
T ss_dssp             BSSGGGT
T ss_pred             ccccccc
Confidence            9999854

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.3e-35  Score=262.21  Aligned_cols=217  Identities=15%  Similarity=0.145  Sum_probs=181.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE---------ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT---------ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS   72 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   72 (275)
                      +++++|++|||||++|||++++++|+++|++|+++         +|+..+++...+++...+..      ..+|+++.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~------~~~D~~~~~~   78 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK------AVANYDSVEA   78 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE------EEEECCCGGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe------EEEeCCCHHH
Confidence            45789999999999999999999999999999996         45777777777777654321      3589999999


Q ss_pred             HHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           73 VSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      ++++++++.+.++++|+||||||+....++.+.+.++|+..+++|+.|+++++++++|.|++++.++||++||..+..+.
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~  158 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  158 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence            99999999999999999999999877666777899999999999999999999999999988777899999998766543


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|++||++++.+++.++.++  .+|+||+|+||+
T Consensus       159 ------------------------------------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~  196 (319)
T 1gz6_A          159 ------------------------------------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNA  196 (319)
T ss_dssp             ------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEC
T ss_pred             ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCC
Confidence                                                      567899999999999999999998  589999999999


Q ss_pred             eecCCcCCC------CCCChhhhhccceeecccCCCCCcceEec
Q 023896          231 VKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFL  268 (275)
Q Consensus       231 v~T~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~  268 (275)
                      + |++....      ...+|++.++.+++++..+. ..+|.+|.
T Consensus       197 ~-t~~~~~~~~~~~~~~~~p~dvA~~~~~l~s~~~-~~tG~~~~  238 (319)
T 1gz6_A          197 G-SRMTETVMPEDLVEALKPEYVAPLVLWLCHESC-EENGGLFE  238 (319)
T ss_dssp             C-STTTGGGSCHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEEE
T ss_pred             c-cccccccCChhhhccCCHHHHHHHHHHHhCchh-hcCCCEEE
Confidence            8 8775431      12578888888777665432 33555543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.3e-36  Score=254.54  Aligned_cols=212  Identities=16%  Similarity=0.052  Sum_probs=175.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-e--cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-A--RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.++++...+++  .+          .|+.+.++++++++++.+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~----------~~~~~~~~v~~~~~~~~~   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG----------TIALAEQKPERLVDATLQ   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT----------EEECCCCCGGGHHHHHGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC----------CcccCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988777665554  11          233478888999999999


Q ss_pred             hcCCccEEEcCCccccc---chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           83 QFGKLDILTKGDAEVDW---SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .++++|+||||||....   .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.       
T Consensus        69 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  141 (244)
T 1zmo_A           69 HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-------  141 (244)
T ss_dssp             GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-------
T ss_pred             HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-------
Confidence            99999999999998766   66778899999999999999999999999999988878999999998877554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc-
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN-  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~-  236 (275)
                                                         ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++. 
T Consensus       142 -----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  186 (244)
T 1zmo_A          142 -----------------------------------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF  186 (244)
T ss_dssp             -----------------------------------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc
Confidence                                               667899999999999999999998  589999999999999986 


Q ss_pred             --CC--------------C---CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          237 --FH--------------A---GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       237 --~~--------------~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                        ..              .   ...+|++.++.++.++.......+|..+..++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          187 PTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             CHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEEST
T ss_pred             ccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCC
Confidence              21              0   12366777777666665444445566555443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.8e-35  Score=258.82  Aligned_cols=223  Identities=17%  Similarity=0.100  Sum_probs=181.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|++|||||++|||++++++|+++|++|++++|+..+.+...+++....+  .++.++++|+++.++++++++++.
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999888887777765411  138899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh-cCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|. +.+.++||++||..+..+.        
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  171 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS--------  171 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC--------
Confidence            9999999999999987666677788999999999999999999999999997 4456899999998765443        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC-CcC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD-INF  237 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~-~~~  237 (275)
                                                        ++...|++||++++.+++.++.++  .+|+||+|+||++.|+ +..
T Consensus       172 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  217 (302)
T 1w6u_A          172 ----------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS  217 (302)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             ----------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence                                              567899999999999999999997  5899999999999987 322


Q ss_pred             CC-----------------CCCChhhhhccceeecccCCCCCcceEec
Q 023896          238 HA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  268 (275)
Q Consensus       238 ~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~  268 (275)
                      ..                 ...++++.++.++.++.......+|..+.
T Consensus       218 ~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  265 (302)
T 1w6u_A          218 RLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIK  265 (302)
T ss_dssp             -CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             hcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEE
Confidence            11                 01356666666665554333333444443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.5e-35  Score=251.43  Aligned_cols=221  Identities=23%  Similarity=0.286  Sum_probs=185.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++|||||++|||++++++|+++|++|+++ +|+..+.+...+++...+.   ++.++++|+++.++++++++++.+.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC---EEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---cEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999984 8998887777777665432   38889999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|++++.++||++||..+..+.            
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  145 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN------------  145 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC------------
Confidence            99999999999877666777889999999999999999999999999987777899999998766443            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC---
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA---  239 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~---  239 (275)
                                                    ++...|+++|++++.+++.++.++  .++++|+|+||+++|++....   
T Consensus       146 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  195 (244)
T 1edo_A          146 ------------------------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED  195 (244)
T ss_dssp             ------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH
T ss_pred             ------------------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH
Confidence                                          567899999999999999999997  689999999999999875321   


Q ss_pred             ------------CCCChhhhhccceeecccCC-CCCcceEeccCc
Q 023896          240 ------------GILSVEEGAESPVKLALLPD-GGPTGRFFLRKE  271 (275)
Q Consensus       240 ------------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~  271 (275)
                                  ...++++.++.++.++..+. ...+|..+..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          196 MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence                        12477888877777663332 334566555443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.6e-36  Score=285.44  Aligned_cols=217  Identities=18%  Similarity=0.198  Sum_probs=182.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh---------hHHHHHHHHHHhcCCCCCceeEEEecccChHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---------KRGLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v   73 (275)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.         +.++...+++...+..      ..+|+++.+++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~------~~~d~~d~~~~   78 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV------AVADYNNVLDG   78 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE------EEEECCCTTCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe------EEEEcCCHHHH
Confidence            56899999999999999999999999999999998765         5566677777654322      23699999999


Q ss_pred             HHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC
Q 023896           74 SSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL  153 (275)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  153 (275)
                      +++++++.++||+||+||||||+....++.+.+.++|+++|++|+.|+|+++|+++|+|++++.|+|||+||.++..+. 
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~-  157 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN-  157 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-
Confidence            9999999999999999999999877777778899999999999999999999999999988778999999998887654 


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV  231 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v  231 (275)
                                                               ++...|++||+|+.+|+++++.|+  .|||||+|+|| +
T Consensus       158 -----------------------------------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~  195 (604)
T 2et6_A          158 -----------------------------------------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A  195 (604)
T ss_dssp             -----------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C
T ss_pred             -----------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C
Confidence                                                     677899999999999999999998  58999999998 6


Q ss_pred             ecCCcCCC------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          232 KTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       232 ~T~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      .|+|....      ...+|++.+..+++++... ...+|..+..
T Consensus       196 ~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~itG~~~~v  238 (604)
T 2et6_A          196 RSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAE-NELTGQFFEV  238 (604)
T ss_dssp             CCHHHHTTSCHHHHTTCSHHHHHHHHHHHTSSS-CCCCSCEEEE
T ss_pred             cCccccccCChhhhccCCHHHHHHHHHHHhCCc-ccCCCCEEEE
Confidence            88875321      2367888888888777654 4455555543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=8.9e-36  Score=250.22  Aligned_cols=198  Identities=25%  Similarity=0.222  Sum_probs=165.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+..                       +|++++++++++++++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETI   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999864                       7999999998888754


Q ss_pred             HhhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                          +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.       
T Consensus        58 ----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~-------  124 (223)
T 3uce_A           58 ----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVV-------  124 (223)
T ss_dssp             ----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCC-------
T ss_pred             ----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCC-------
Confidence                8999999999987 5566778899999999999999999999999999975  4799999998877554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                         ++...|+++|++++.+++.++.|+..||||+|+||+|+|++....
T Consensus       125 -----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~  169 (223)
T 3uce_A          125 -----------------------------------ANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGM  169 (223)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTS
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhc
Confidence                                               677899999999999999999999559999999999999986432


Q ss_pred             C-------------------CCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 G-------------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ~-------------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      .                   ..+|++.++..+.++..  ...+|..+..+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~--~~~tG~~i~vdg  218 (223)
T 3uce_A          170 NADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN--SYMTGTVIDVDG  218 (223)
T ss_dssp             CHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC--TTCCSCEEEEST
T ss_pred             chhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC--CCCCCcEEEecC
Confidence            1                   23677777777766652  335566655543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.7e-35  Score=251.06  Aligned_cols=213  Identities=23%  Similarity=0.243  Sum_probs=175.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+.++   ..+++   +     +..+++|+++ ++++++++++.+.++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~-----~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G-----AVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T-----CEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C-----cEEEecCCch-HHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999875   22333   1     6678999999 999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.             
T Consensus        70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  136 (239)
T 2ekp_A           70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG-------------  136 (239)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC-------------
Confidence            9999999999877667778899999999999999999999999999987777899999998776432             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                                 ..++...|++||++++.+++.++.|+  .+|+||+|+||+++|++....    
T Consensus       137 ---------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  189 (239)
T 2ekp_A          137 ---------------------------GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNP  189 (239)
T ss_dssp             ---------------------------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH
T ss_pred             ---------------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCH
Confidence                                       01456789999999999999999998  589999999999999975311    


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                   ...+|++.++.++.++.......+|..+..+
T Consensus       190 ~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vd  233 (239)
T 2ekp_A          190 ELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVD  233 (239)
T ss_dssp             HHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEEC
Confidence                         1235666666666655443334455555444

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.2e-35  Score=254.28  Aligned_cols=214  Identities=16%  Similarity=0.097  Sum_probs=177.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+ +...+..   +..+     +.++++++++++.+.+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~---~~~~-----d~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQ---LKPM-----SEQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTT---SEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCc---EEEE-----CHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999887776654 5443322   3332     778899999999999999


Q ss_pred             ccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.             
T Consensus        73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  139 (254)
T 1zmt_A           73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-------------  139 (254)
T ss_dssp             CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-------------
T ss_pred             CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-------------
Confidence            99999999987 6666778899999999999999999999999999987777999999998887554             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCee---------ecC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFV---------KTD  234 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v---------~T~  234 (275)
                                                   ++...|++||++++.+++.++.++  .+|+||+|+||+|         +|+
T Consensus       140 -----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~  190 (254)
T 1zmt_A          140 -----------------------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTE  190 (254)
T ss_dssp             -----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHH
T ss_pred             -----------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCc
Confidence                                         567899999999999999999998  5899999999999         888


Q ss_pred             CcCCC--------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          235 INFHA--------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       235 ~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      +....              ...+|++.++.++.++.......+|..+..+.
T Consensus       191 ~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdg  241 (254)
T 1zmt_A          191 PWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAG  241 (254)
T ss_dssp             HHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEEST
T ss_pred             ccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            74321              13477888887777766554455666665543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.6e-35  Score=249.13  Aligned_cols=220  Identities=25%  Similarity=0.320  Sum_probs=184.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeE-EEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLF-HQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +|++|||||++|||++++++|+++|++|+++ +|+.++.+...+++...+..   +.. +.+|+++.++++++++++.+.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP---LVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS---CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999998 89988888777777654432   555 899999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.           
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  146 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------  146 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------
Confidence            999999999999877666777889999999999999999999999999987777899999998766443           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC--
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                     ++...|+++|++++.+++.++.++  .++++|+|+||++.|++....  
T Consensus       147 -------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  195 (245)
T 2ph3_A          147 -------------------------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQ  195 (245)
T ss_dssp             -------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH
T ss_pred             -------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCH
Confidence                                           567889999999999999999998  589999999999999874321  


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                   ...++++.++.++.++..+....+|..+..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  239 (245)
T 2ph3_A          196 EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVD  239 (245)
T ss_dssp             HHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence                         1247788888777766544444455555444

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-35  Score=257.04  Aligned_cols=224  Identities=23%  Similarity=0.207  Sum_probs=182.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC--CCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV--DPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++...+++.....  ...++.++++|+++.++++++++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999988888887765211  1223889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.+.+.++||++||.. ..+.        
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~--------  165 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGF--------  165 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCC--------
Confidence            9999999999999997766667778899999999999999999999999965544468999999976 4332        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCc--
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN--  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~--  236 (275)
                                                        +....|+++|++++.+++.++.++  .+|+||+|+||+|.|++.  
T Consensus       166 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  211 (303)
T 1yxm_A          166 ----------------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE  211 (303)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT
T ss_pred             ----------------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhh
Confidence                                              567889999999999999999998  589999999999999842  


Q ss_pred             CCC-----------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          237 FHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       237 ~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ...                 ...++++.++.++.++.......+|..+..
T Consensus       212 ~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v  261 (303)
T 1yxm_A          212 NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDV  261 (303)
T ss_dssp             TSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEE
Confidence            110                 123566666666665543333344544443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.7e-35  Score=272.93  Aligned_cols=220  Identities=21%  Similarity=0.205  Sum_probs=176.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+... +...+......     ..++++|+++.++++++++++.+
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~~-----~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG-----GTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHHT-----CEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcC-----CeEEEEecCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999997532 22222222221     56889999999999999999999


Q ss_pred             hcCC-ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGK-LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++++ ||+||||||+.....+.+.+.++|++.+++|+.+++++.+++.|.|.+++.++||++||+.+..+.         
T Consensus       284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~---------  354 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN---------  354 (454)
T ss_dssp             HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC---------
T ss_pred             HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC---------
Confidence            9986 999999999988878888999999999999999999999999999988788999999998887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|+++++|+++++.++  .+|+||+|+||+|+|+|....
T Consensus       355 ---------------------------------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          355 ---------------------------------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred             ---------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence                                             678899999999999999999998  689999999999999987542


Q ss_pred             C---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 G---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      .               ..+|++.++.+++++.......+|..+..+
T Consensus       402 ~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vd  447 (454)
T 3u0b_A          402 PLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVC  447 (454)
T ss_dssp             ----CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEES
T ss_pred             chhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEEC
Confidence            1               124555555555555444444555555444

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4.9e-36  Score=254.68  Aligned_cols=212  Identities=11%  Similarity=0.046  Sum_probs=178.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.++|++|||||++|||++++++|+++|++|++++|+..+.+             .....+++|++++++++++++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~   70 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGK   70 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999876422             0156788999999999999999999


Q ss_pred             hc--CCccEEEcCCcccccchh-hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           83 QF--GKLDILTKGDAEVDWSKV-CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        83 ~~--g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .+  +++|+||||||.....++ .+.+.++|++.+++|+.+++.+++++.|.|++  .|+||++||..+..+.       
T Consensus        71 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~-------  141 (241)
T 1dhr_A           71 LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGT-------  141 (241)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC-------
T ss_pred             HhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCC-------
Confidence            99  799999999998766655 56788999999999999999999999999975  4799999998877554       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC----CeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP----KFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~----~i~vn~v~pG~v~T~~  235 (275)
                                                         ++...|++||++++.+++.++.|+.    +|+||+|+||+|+|++
T Consensus       142 -----------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          142 -----------------------------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             -----------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence                                               6678999999999999999999973    7999999999999997


Q ss_pred             cCCC-------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          236 NFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       236 ~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ....       ...++++.++.++.++.......+|.++..+.
T Consensus       187 ~~~~~~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          187 NRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             HHHHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             ccccCcchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence            5321       12577888888888776555556777765543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=7.7e-35  Score=247.24  Aligned_cols=217  Identities=23%  Similarity=0.201  Sum_probs=178.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ||++++|++|||||++|||++++++|+++|++|++++|+..+++...+++.    .   ..++++|+++.++++++++  
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~--   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----G---IEPVCVDLGDWEATERALG--   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T---CEEEECCTTCHHHHHHHHT--
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----C---CCEEEEeCCCHHHHHHHHH--
Confidence            466899999999999999999999999999999999999887666554431    1   5567999999999887765  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                        .++++|+||||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+++ .++||++||..+..+.       
T Consensus        73 --~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  143 (244)
T 3d3w_A           73 --SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-------  143 (244)
T ss_dssp             --TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------
T ss_pred             --HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-------
Confidence              568999999999987766677788999999999999999999999999998765 6899999998776543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||++++.+++.++.++  .+|+||+|+||+|.|++..
T Consensus       144 -----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          144 -----------------------------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             -----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence                                               567899999999999999999998  5899999999999998743


Q ss_pred             CC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          238 HA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       238 ~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ..                 ...++++.++.++.++.......+|..|..+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  238 (244)
T 3d3w_A          189 ATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE  238 (244)
T ss_dssp             HHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEEC
Confidence            10                 1246777777777766544444556555444

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.9e-36  Score=253.55  Aligned_cols=209  Identities=25%  Similarity=0.222  Sum_probs=173.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++|++|||||++|||++++++|++ .|+.|++.+|+...             ....+.++++|++++++++++++.+ +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~~~~~~~-~   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-------------SAENLKFIKADLTKQQDITNVLDII-K   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-------------CCTTEEEEECCTTCHHHHHHHHHHT-T
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-------------ccccceEEecCcCCHHHHHHHHHHH-H
Confidence            4679999999999999999999999 78999999987641             0112788999999999999999655 3


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                       ++++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|++.  |+||++||..+..+.          
T Consensus        68 -~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~----------  134 (244)
T 4e4y_A           68 -NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAK----------  134 (244)
T ss_dssp             -TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCC----------
T ss_pred             -hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCC----------
Confidence             7899999999999877778888999999999999999999999999999754  799999998877654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++.... 
T Consensus       135 --------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  182 (244)
T 4e4y_A          135 --------------------------------PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI  182 (244)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH
T ss_pred             --------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHH
Confidence                                            677899999999999999999998  589999999999999974311 


Q ss_pred             -------------------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 -------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 -------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                               ...+|++.++.++.++.......+|..+..+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          183 QKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence                                     13467777777777666555555666655543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.8e-36  Score=272.02  Aligned_cols=222  Identities=17%  Similarity=0.052  Sum_probs=174.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEecChhHHH------------HHHHHHHhcCCCCCceeEEEecccChH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGL------------EAVEKLKASGVDPELLLFHQLDISDLA   71 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~~Dl~~~~   71 (275)
                      .+|++|||||++|||+++++.|++ +|++|++++|+....+            ...+.+...+..   ...+++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~---a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY---SKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCC---EEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCc---EEEEEecCCCHH
Confidence            479999999999999999999999 9999999999865432            223444444433   788999999999


Q ss_pred             HHHHHHHHHHhhc-CCccEEEcCCccc-------------ccchh---------------------hccchhHHHHhHHh
Q 023896           72 SVSSLADFIKTQF-GKLDILTKGDAEV-------------DWSKV---------------------CYQTYELAVECLKT  116 (275)
Q Consensus        72 ~v~~~~~~~~~~~-g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~  116 (275)
                      +++++++++.++| |+||+||||||..             ...++                     .+.+.++|+..+++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 9999999999862             11222                     24688999999999


Q ss_pred             hcccHH-HHHHHHhhh-hhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCC
Q 023896          117 NYYGTK-QTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC  194 (275)
Q Consensus       117 N~~~~~-~l~~~~~~~-~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (275)
                      |..+.| .+++++.+. |.+ ++|+||++||+.+..+.                                          
T Consensus       217 n~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi~g~~~~------------------------------------------  253 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLA-DGARSVAFSYIGTEITW------------------------------------------  253 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-EEEEEEEEEECCCGGGH------------------------------------------
T ss_pred             hchhHHHHHHHHHHHHHHhh-CCCEEEEEeCchhhccC------------------------------------------
Confidence            999998 788887654 443 45899999999887543                                          


Q ss_pred             CCC--chhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCCCCh-hhhhccceeecccCCCCCcceEecc
Q 023896          195 PHS--SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       195 ~~~--~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      +.+  ..|++||+++.+++|+++.|+  .|||||+|+||+|+|++....+.... ......++++..+|++.+....||.
T Consensus       254 p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~  333 (422)
T 3s8m_A          254 PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLF  333 (422)
T ss_dssp             HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHh
Confidence            333  789999999999999999998  68999999999999999764421111 0112346777888887777777776


Q ss_pred             Ccc
Q 023896          270 KEE  272 (275)
Q Consensus       270 ~~~  272 (275)
                      ++.
T Consensus       334 sd~  336 (422)
T 3s8m_A          334 RER  336 (422)
T ss_dssp             HHT
T ss_pred             cch
Confidence            653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.6e-35  Score=264.94  Aligned_cols=221  Identities=11%  Similarity=-0.037  Sum_probs=174.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEecChhHHH------------HHHHHHHhcCCCCCceeEEEecccChH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGL------------EAVEKLKASGVDPELLLFHQLDISDLA   71 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~~Dl~~~~   71 (275)
                      .+|++|||||++|||+++++.|++ +|++|++++|+....+            ...+.+...+..   ...+++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~---a~~i~~Dvtd~~  122 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY---AKSINGDAFSDE  122 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC---EEEEESCTTSHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc---eEEEECCCCCHH
Confidence            579999999999999999999999 9999999998765321            223344444333   788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEcCCccc-------------ccchh---------------------hccchhHHHHhHHhh
Q 023896           72 SVSSLADFIKTQFGKLDILTKGDAEV-------------DWSKV---------------------CYQTYELAVECLKTN  117 (275)
Q Consensus        72 ~v~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~N  117 (275)
                      +++++++++.++||+||+||||||..             ...++                     .+.+.++|+.++++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            99999999999999999999999874             12233                     557899999999999


Q ss_pred             cccHH-HHHHHHhh-hhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCC
Q 023896          118 YYGTK-QTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP  195 (275)
Q Consensus       118 ~~~~~-~l~~~~~~-~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (275)
                      ..+.| .+++++.+ .|.+ ++|+||++||+.+..+.                                          +
T Consensus       203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~------------------------------------------p  239 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITH------------------------------------------D  239 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGT------------------------------------------T
T ss_pred             chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcC------------------------------------------C
Confidence            99998 78887765 4543 45899999999887654                                          5


Q ss_pred             CC--chhhHhHHHHHHHHHHHHHhC--C-CeEEEeecCCeeecCCcCCCCCCChh-hhhccceeecccCCCCCcceEecc
Q 023896          196 HS--SAYKVSKAVINAYTRILAKRY--P-KFCVNCVCPGFVKTDINFHAGILSVE-EGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       196 ~~--~~Y~~sK~a~~~~~~~~a~~~--~-~i~vn~v~pG~v~T~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      .+  ..|++||+++++++|+++.|+  . |||||+|+||+|.|++....+..+.. .....++++..++++......||.
T Consensus       240 ~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~  319 (405)
T 3zu3_A          240 IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLY  319 (405)
T ss_dssp             TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            55  899999999999999999999  5 89999999999999987654321111 112336777777777777666666


Q ss_pred             Cc
Q 023896          270 KE  271 (275)
Q Consensus       270 ~~  271 (275)
                      ++
T Consensus       320 sd  321 (405)
T 3zu3_A          320 KD  321 (405)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3.9e-36  Score=262.25  Aligned_cols=223  Identities=24%  Similarity=0.295  Sum_probs=177.3

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+++++|++|||||++|||++++++|+++|++|++++|+..+++...+++      ..++.++++|+++.++++++++++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM------AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS------SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            56788999999999999999999999999999999999998877765544      123889999999999998888765


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          +++|+||||||+....  ...+.++|++.+++|+.++++++++++|.|.+    +||++||..+..+..+...   
T Consensus        85 ----~~iD~lv~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~---  151 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAVP--YALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLED---  151 (291)
T ss_dssp             ----CCEEEEEECCCCCSCC--CCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSC---
T ss_pred             ----CCCCEEEECCcCCCCc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccc---
Confidence                7999999999986432  45688999999999999999999999999963    8999999887755321000   


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CC--eEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK--FCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~--i~vn~v~pG~v~T~~~  236 (275)
                         .                       ..+..+.++...|++||++++.+++.++.++  .+  |+||+|+||+|+|++.
T Consensus       152 ---~-----------------------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~  205 (291)
T 3rd5_A          152 ---L-----------------------NWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ  205 (291)
T ss_dssp             ---T-----------------------TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-
T ss_pred             ---c-----------------------cccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccc
Confidence               0                       0011223556789999999999999999998  35  9999999999999987


Q ss_pred             CCCC---------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          237 FHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       237 ~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ....               ..+|++.++.++.++..+  ..+|+++..+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vd  252 (291)
T 3rd5_A          206 GASGRKLGDALMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGPR  252 (291)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHSC--CCTTCEEEET
T ss_pred             cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCc
Confidence            5431               114888888888877763  5777777654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=4.6e-35  Score=250.38  Aligned_cols=213  Identities=22%  Similarity=0.280  Sum_probs=171.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADF   79 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~   79 (275)
                      |++++|++|||||++|||++++++|+++|++ |++++|+...  ...+++..... ..++.++++|++++ +++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHH
Confidence            4688999999999999999999999999996 9999998742  22233332211 12388899999998 999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~  156 (275)
                      +.+.++++|+||||||..        +.++|++.+++|+.++++++++++|.|.+++   .|+||++||..+..+.    
T Consensus        78 ~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  145 (254)
T 1sby_A           78 IFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----  145 (254)
T ss_dssp             HHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----
T ss_pred             HHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC----
Confidence            999999999999999974        4578999999999999999999999997653   5899999998876553    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||++++.+++.++.++  .+|+||+|+||+|+|+
T Consensus       146 --------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1sby_A          146 --------------------------------------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             --------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             --------------------------------------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence                                                  567899999999999999999987  5899999999999999


Q ss_pred             CcCCC-----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          235 INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       235 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +....                 +..++++.++.++.++.   ...+|.+|..+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~---~~~~G~~~~v~  237 (254)
T 1sby_A          188 LVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE---ANKNGAIWKLD  237 (254)
T ss_dssp             HHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH---HCCTTCEEEEE
T ss_pred             cccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH---cCCCCCEEEEe
Confidence            75321                 12367778877776554   22445555443

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-34  Score=248.62  Aligned_cols=189  Identities=28%  Similarity=0.329  Sum_probs=167.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|++|||||+||||++++++|+++|++|++++| +..+.+...+++...+..   +.++++|++++++++++++++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777777777777654433   888999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc-cCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA-LKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  159 (275)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|++ + ++||++||..+. .+.       
T Consensus        94 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~-------  164 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGI-------  164 (274)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSC-------
T ss_pred             HHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCC-------
Confidence            999999999999999877766777899999999999999999999999999973 3 899999998766 332       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|+++|++++.+++.++.++  +++++|+|+||++.|++..
T Consensus       165 -----------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          165 -----------------------------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             -----------------------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             -----------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence                                               567889999999999999999998  6899999999999998643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.5e-34  Score=251.52  Aligned_cols=210  Identities=22%  Similarity=0.272  Sum_probs=179.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||+||||++++++|+++|++|++++|+..+++...+++...+..  ++.++.+|+++.++++++++++.+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--SAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS--EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC--ceEEEeCCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888877777654432  388899999999999999999999


Q ss_pred             hcCCccEEEcC-CcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKG-DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|+|||| +|.... +..+.+.+++++.+++|+.|++.++++++|.|++. .|+||++||..+..+.         
T Consensus       103 ~~g~iD~li~naag~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  171 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSL-NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY---------  171 (286)
T ss_dssp             HHTSCSEEEECCCCCCCC-CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC---------
T ss_pred             HcCCCCEEEECCccCCCC-ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCC---------
Confidence            99999999999 565433 33456889999999999999999999999998754 4899999998876554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||++++.+++.++.|+    .+++|++|+||+|+|++..
T Consensus       172 ---------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~  218 (286)
T 1xu9_A          172 ---------------------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM  218 (286)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH
Confidence                                             667899999999999999999987    5899999999999999752


Q ss_pred             C-------CCCCChhhhhccceeecccC
Q 023896          238 H-------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 ~-------~~~~~~~~~a~~~~~~~~~~  258 (275)
                      .       ....++++.++.++..+..+
T Consensus       219 ~~~~~~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          219 KAVSGIVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHSCGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HhccccccCCCCCHHHHHHHHHHHHhcC
Confidence            1       23578899998888766543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-34  Score=249.03  Aligned_cols=213  Identities=25%  Similarity=0.296  Sum_probs=173.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++|++|||||++|||++++++|+++|++|++++|+.++.+...+++..... ..++.++++|++++++++++++++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999887777666654321 123888999999999999999999999


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHHhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++++|+||||||...        .++|++.+++|+.+++.+++.++|.|++++   .++||++||..+..+.        
T Consensus        84 ~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  147 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--------  147 (267)
T ss_dssp             HSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--------
T ss_pred             cCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC--------
Confidence            999999999999652        467899999999999999999999997653   5899999998876543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHH--HHhC--CCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL--AKRY--PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~--a~~~--~~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++++  +.++  .+||||+|+||+|+|++.
T Consensus       148 ----------------------------------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~  193 (267)
T 2gdz_A          148 ----------------------------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL  193 (267)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh
Confidence                                              56788999999999999996  5665  689999999999999874


Q ss_pred             CCC-----------------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          237 FHA-----------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       237 ~~~-----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      ...                       ...+|++.++.++.++....  .+|..+..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~--~~G~~~~v  247 (267)
T 2gdz_A          194 ESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA--LNGAIMKI  247 (267)
T ss_dssp             HGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT--CSSCEEEE
T ss_pred             hccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcC--CCCcEEEe
Confidence            211                       12367777777776665432  44444433

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.1e-35  Score=260.02  Aligned_cols=189  Identities=20%  Similarity=0.170  Sum_probs=157.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHh---cCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA---SGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++|++|||||++|||++++++|+++|++|++++|+..+.+...+.+..   ......++.++++|++++++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            478999999999999999999999999998888765543333222221   1111123889999999999999999887 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                       .++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.         
T Consensus        80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------  149 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------  149 (327)
T ss_dssp             -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------
T ss_pred             -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---------
Confidence             3589999999999877667777899999999999999999999999999987777999999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||++++.+++.++.|+  .+|+||+|+||+|+|++..
T Consensus       150 ---------------------------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~  194 (327)
T 1jtv_A          150 ---------------------------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME  194 (327)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----
T ss_pred             ---------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHh
Confidence                                             567899999999999999999998  5899999999999999864

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.2e-35  Score=251.12  Aligned_cols=205  Identities=19%  Similarity=0.129  Sum_probs=149.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++++|++|||||++|||++++++|++ |++|++++|+..+++...+    .    ..+.++.+|+++.++ .+.+.+..
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~----~~~~~~~~D~~~~~~-~~~~~~~~   70 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----I----EGVEPIESDIVKEVL-EEGGVDKL   70 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----S----TTEEEEECCHHHHHH-TSSSCGGG
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----h----cCCcceecccchHHH-HHHHHHHH
Confidence            467899999999999999999999998 9999999999887665433    1    128889999998877 44455566


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.         
T Consensus        71 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~---------  140 (245)
T 3e9n_A           71 KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH---------  140 (245)
T ss_dssp             TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-----------------
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC---------
Confidence            7789999999999988777777789999999999999999999999999998755 899999998877554         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....
T Consensus       141 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  187 (245)
T 3e9n_A          141 ---------------------------------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL  187 (245)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh
Confidence                                             667899999999999999999998  589999999999999986432


Q ss_pred             -----------CCCChhhhhccceeecccCC
Q 023896          240 -----------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 -----------~~~~~~~~a~~~~~~~~~~~  259 (275)
                                 ...+|++.++.++.++..+.
T Consensus       188 ~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          188 MDSQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             --------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             hhhhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence                       13578888888887776544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-35  Score=247.68  Aligned_cols=211  Identities=12%  Similarity=0.060  Sum_probs=175.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|++|||||++|||++++++|+++|++|++++|+.++.+             ....++++|+++.++++++++++.+.
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~   67 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASS   67 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999876421             01567789999999999999999999


Q ss_pred             c--CCccEEEcCCcccccchh-hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           84 F--GKLDILTKGDAEVDWSKV-CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        84 ~--g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +  +++|+||||||.....++ .+.+.++|++.+++|+.+++.+++++.|.|++  .|+||++||..+..+.        
T Consensus        68 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~--------  137 (236)
T 1ooe_A           68 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPT--------  137 (236)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC--------
T ss_pred             hCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCC--------
Confidence            9  799999999998766555 56788999999999999999999999999965  4799999998877554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC----CeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP----KFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~----~i~vn~v~pG~v~T~~~  236 (275)
                                                        ++...|++||++++.+++.++.++.    +|+||+|+||+|+|++.
T Consensus       138 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~  183 (236)
T 1ooe_A          138 ----------------------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN  183 (236)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch
Confidence                                              6678999999999999999999973    69999999999999975


Q ss_pred             CCC-------CCCChhhhhccceeecccC-CCCCcceEeccCc
Q 023896          237 FHA-------GILSVEEGAESPVKLALLP-DGGPTGRFFLRKE  271 (275)
Q Consensus       237 ~~~-------~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~  271 (275)
                      ...       ...++++.++.++..+..+ ....+|.++..++
T Consensus       184 ~~~~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~g  226 (236)
T 1ooe_A          184 RKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT  226 (236)
T ss_dssp             HHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             hhcCCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEec
Confidence            321       2357888888887555333 3445666665443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-34  Score=242.26  Aligned_cols=216  Identities=23%  Similarity=0.228  Sum_probs=177.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++|++|||||+||||++++++|+++|++|++++|+..+.+...+++    ..   ..++.+|+++.++++++++   
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~---~~~~~~D~~~~~~~~~~~~---   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG---IEPVCVDLGDWDATEKALG---   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT---CEEEECCTTCHHHHHHHHT---
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC---CCcEEecCCCHHHHHHHHH---
Confidence            5678999999999999999999999999999999999988766554432    11   5567999999999887776   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                       .++++|+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||..+..+.        
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  143 (244)
T 1cyd_A           73 -GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------  143 (244)
T ss_dssp             -TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred             -HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC--------
Confidence             668999999999987766677788999999999999999999999999998765 6899999998776543        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|++++.+++.++.++  .++++|+|+||++.|++...
T Consensus       144 ----------------------------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~  189 (244)
T 1cyd_A          144 ----------------------------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK  189 (244)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH
T ss_pred             ----------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc
Confidence                                              567889999999999999999997  58999999999999986421


Q ss_pred             -----------------CCCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          239 -----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       239 -----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                       ....++++.++.++.++..+....+|..+..+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  238 (244)
T 1cyd_A          190 VSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD  238 (244)
T ss_dssp             HTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEES
T ss_pred             cccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEEC
Confidence                             01347778887777766544444455554433

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=9.3e-35  Score=248.36  Aligned_cols=208  Identities=15%  Similarity=0.080  Sum_probs=176.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+|++|||||++|||++++++|+++|++|++++|+..+.+               ...+.+|+++.++++++++++.+.
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999886421               234778999999999999999999


Q ss_pred             cCCccEEEcCCcccccch-hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      ++++|+||||||...... ..+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.          
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~----------  152 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRT----------  152 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC----------
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCC----------
Confidence            999999999999866544 456788999999999999999999999999975  4799999998877654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++...|++||++++.+++.++.++    ++|+||+|+||+|+|++...
T Consensus       153 --------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~  200 (251)
T 3orf_A          153 --------------------------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK  200 (251)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH
T ss_pred             --------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh
Confidence                                            678899999999999999999995    58999999999999998532


Q ss_pred             C-------CCCChhhhhccceeeccc-CCCCCcceEeccC
Q 023896          239 A-------GILSVEEGAESPVKLALL-PDGGPTGRFFLRK  270 (275)
Q Consensus       239 ~-------~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~  270 (275)
                      .       ...++++.++.++.++.. .....+|..+...
T Consensus       201 ~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~  240 (251)
T 3orf_A          201 YMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFE  240 (251)
T ss_dssp             HCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             hcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEe
Confidence            1       235889999999988877 4455666666543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.6e-35  Score=260.28  Aligned_cols=190  Identities=19%  Similarity=0.227  Sum_probs=131.4

Q ss_pred             cCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecCh-----------hHHH-----------HHHHHHHhcCCCCCc
Q 023896            4 ATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDE-----------KRGL-----------EAVEKLKASGVDPEL   59 (275)
Q Consensus         4 ~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~-----------~~~~-----------~~~~~l~~~~~~~~~   59 (275)
                      +++|++|||||  ++|||++++++|+++|++|++++|+.           .+++           +..+++...+.....
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            68999999999  89999999999999999999998763           1111           112222221110000


Q ss_pred             eeEEE------------ecccC--------hHHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhh
Q 023896           60 LLFHQ------------LDISD--------LASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTN  117 (275)
Q Consensus        60 ~~~~~------------~Dl~~--------~~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N  117 (275)
                      ...+.            +|+++        +++++++++++.++||+||+||||||...  ..++.+.+.++|++.+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            12333            34454        55899999999999999999999999753  4566778999999999999


Q ss_pred             cccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC
Q 023896          118 YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS  197 (275)
Q Consensus       118 ~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (275)
                      +.++++++++++|+|++  .|+||++||..+..+.                                          ++.
T Consensus       167 ~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~------------------------------------------~~~  202 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKE--GGSALALSYIASEKVI------------------------------------------PGY  202 (319)
T ss_dssp             THHHHHHHHHHGGGEEE--EEEEEEEEECC--------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHhc--CceEEEEecccccccc------------------------------------------Ccc
Confidence            99999999999999975  3899999998876543                                          444


Q ss_pred             -chhhHhHHHHHHHHHHHHHhC---CCeEEEeecCCeeecCCcC
Q 023896          198 -SAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       198 -~~Y~~sK~a~~~~~~~~a~~~---~~i~vn~v~pG~v~T~~~~  237 (275)
                       ..|++||+++++|+++++.|+   .+||||+|+||+|+|++..
T Consensus       203 ~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  246 (319)
T 2ptg_A          203 GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS  246 (319)
T ss_dssp             ----------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence             589999999999999999997   3899999999999999854

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.6e-34  Score=274.25  Aligned_cols=219  Identities=16%  Similarity=0.167  Sum_probs=170.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEec---------ChhHHHHHHHHHHhcCCCCCceeEEEecccChHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR---------DEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS   72 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   72 (275)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +...++...+++...+..      ..+|+++.++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~D~~d~~~   88 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE------AVADYNSVID   88 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC------EEECCCCGGG
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe------EEEEeCCHHH
Confidence            4678999999999999999999999999999999988         667777777787765433      3489999999


Q ss_pred             HHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           73 VSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      ++++++++.+.||+||+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||+++..+.
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            99999999999999999999999987777778899999999999999999999999999998888999999998877654


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|++||+|+++|++.++.|+  .+|+||+|+||+
T Consensus       169 ------------------------------------------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~  206 (613)
T 3oml_A          169 ------------------------------------------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA  206 (613)
T ss_dssp             ------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-
T ss_pred             ------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCC
Confidence                                                      677899999999999999999998  589999999997


Q ss_pred             eecCCcCCC------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          231 VKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       231 v~T~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      + |+|....      ...+|++.+..++.++... ...+|.++..+
T Consensus       207 ~-t~~~~~~~~~~~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vd  250 (613)
T 3oml_A          207 A-SRMTEGILPDILFNELKPKLIAPVVAYLCHES-CEDNGSYIESA  250 (613)
T ss_dssp             ------CCCCCHHHHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEE
T ss_pred             C-ChhhhhccchhhhhcCCHHHHHHHHHHhcCCC-cCCCceEEEEC
Confidence            5 5554332      2467888888888777655 44566665543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4.3e-34  Score=252.11  Aligned_cols=190  Identities=21%  Similarity=0.189  Sum_probs=150.6

Q ss_pred             ccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhH------H-HHHHHHHHhc--CCCCCceeEE--------
Q 023896            3 EATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKR------G-LEAVEKLKAS--GVDPELLLFH--------   63 (275)
Q Consensus         3 ~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~------~-~~~~~~l~~~--~~~~~~~~~~--------   63 (275)
                      ++++|++|||||  ++|||++++++|+++|++|++++|+...      . ....+++...  +........+        
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            368999999999  8999999999999999999999987521      0 0011122211  1100001233        


Q ss_pred             ----EecccC--------hHHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHHh
Q 023896           64 ----QLDISD--------LASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEALI  129 (275)
Q Consensus        64 ----~~Dl~~--------~~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  129 (275)
                          .+|+++        +++++++++++.+.||++|+||||||...  ..++.+.+.++|++.+++|+.++++++++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                344554        67899999999999999999999999753  4566678999999999999999999999999


Q ss_pred             hhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC-chhhHhHHHHH
Q 023896          130 PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVIN  208 (275)
Q Consensus       130 ~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~  208 (275)
                      |.|++  +|+||++||..+..+.                                          ++. ..|++||++++
T Consensus       166 ~~m~~--~g~Iv~isS~~~~~~~------------------------------------------~~~~~~Y~asKaal~  201 (315)
T 2o2s_A          166 PIMNE--GGSAVTLSYLAAERVV------------------------------------------PGYGGGMSSAKAALE  201 (315)
T ss_dssp             TTEEE--EEEEEEEEEGGGTSCC------------------------------------------TTCCTTHHHHHHHHH
T ss_pred             HHHhc--CCEEEEEecccccccC------------------------------------------CCccHHHHHHHHHHH
Confidence            99975  3899999998876543                                          444 58999999999


Q ss_pred             HHHHHHHHhC---CCeEEEeecCCeeecCCc
Q 023896          209 AYTRILAKRY---PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       209 ~~~~~~a~~~---~~i~vn~v~pG~v~T~~~  236 (275)
                      +|+++++.|+   .+||||+|+||+|+|++.
T Consensus       202 ~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  232 (315)
T 2o2s_A          202 SDTRTLAWEAGQKYGVRVNAISAGPLKSRAA  232 (315)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred             HHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence            9999999997   489999999999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-33  Score=241.04  Aligned_cols=209  Identities=18%  Similarity=0.195  Sum_probs=169.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..    +++   +    .+.++ +|+  .++++++++++  
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~----~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G----HRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C----SEEEE-CCT--TTCHHHHHHHS--
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C----CeEEE-eeH--HHHHHHHHHHh--
Confidence            46799999999999999999999999999999999997332    222   1    26667 999  56777776655  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                        .++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.          
T Consensus        80 --~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  147 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----------  147 (249)
T ss_dssp             --CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             --cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----------
Confidence              38999999999877777778899999999999999999999999999988777899999998876543          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-  239 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-  239 (275)
                                                      ++...|+++|++++.+++.++.++  .+|+||+|+||+|+|++.... 
T Consensus       148 --------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  195 (249)
T 1o5i_A          148 --------------------------------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL  195 (249)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred             --------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc
Confidence                                            667899999999999999999998  589999999999999974210 


Q ss_pred             ---------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 ---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 ---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ...+|++.++.++.++.......+|..+..+.
T Consensus       196 ~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdg  242 (249)
T 1o5i_A          196 SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDG  242 (249)
T ss_dssp             CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence                           12367777777776665444445565555443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.5e-33  Score=244.17  Aligned_cols=193  Identities=17%  Similarity=0.227  Sum_probs=151.3

Q ss_pred             cccCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEecChhHHH-------HHHHHHHhcCCCC--CceeEEEe-----
Q 023896            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGL-------EAVEKLKASGVDP--ELLLFHQL-----   65 (275)
Q Consensus         2 ~~~~~k~vlItGa~--~gIG~~~a~~l~~~g~~vi~~~r~~~~~~-------~~~~~l~~~~~~~--~~~~~~~~-----   65 (275)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+.....       ...+++.......  .....+.+     
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            45789999999999  99999999999999999999998642110       0001111110000  00223333     


Q ss_pred             -------cccC--------hHHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHH
Q 023896           66 -------DISD--------LASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEAL  128 (275)
Q Consensus        66 -------Dl~~--------~~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  128 (275)
                             |+++        +++++++++++.+++|++|+||||||+..  ..++.+.+.++|++.+++|+.+++++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                   3333        67899999999999999999999998643  455667899999999999999999999999


Q ss_pred             hhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCC-chhhHhHHHH
Q 023896          129 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVI  207 (275)
Q Consensus       129 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~  207 (275)
                      +|.|++  .|+||++||..+..+.                                          ++. ..|++||+++
T Consensus       164 ~~~m~~--~g~iv~isS~~~~~~~------------------------------------------~~~~~~Y~asKaa~  199 (297)
T 1d7o_A          164 LPIMNP--GGASISLTYIASERII------------------------------------------PGYGGGMSSAKAAL  199 (297)
T ss_dssp             GGGEEE--EEEEEEEECGGGTSCC------------------------------------------TTCTTTHHHHHHHH
T ss_pred             HHHhcc--CceEEEEeccccccCC------------------------------------------CCcchHHHHHHHHH
Confidence            999975  3799999998876543                                          444 5899999999


Q ss_pred             HHHHHHHHHhC---CCeEEEeecCCeeecCCcCC
Q 023896          208 NAYTRILAKRY---PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       208 ~~~~~~~a~~~---~~i~vn~v~pG~v~T~~~~~  238 (275)
                      +++++.++.|+   .+||||+|+||+|+|++...
T Consensus       200 ~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          200 ESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            99999999997   38999999999999998643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.4e-33  Score=251.71  Aligned_cols=191  Identities=14%  Similarity=0.091  Sum_probs=156.9

Q ss_pred             cCCCEEEEecCCCchhHH--HHHHHHHCCCEEEEEecChhH------------HHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            4 ATKKYAVVTGSNKGIGFE--TVRQLASKGITVVLTARDEKR------------GLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~--~a~~l~~~g~~vi~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+...            .+...+.+...+.   ++..+++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGL---VAKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTC---CEEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCC---cEEEEEeeCCC
Confidence            458999999999999999  999999999999999997543            2333333344332   28889999999


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCccc-------------ccchh---------------------hccchhHHHHhHH
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAEV-------------DWSKV---------------------CYQTYELAVECLK  115 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~  115 (275)
                      +++++++++++.+++|+||+||||||..             ...++                     .+.+.++|+..++
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~  214 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRK  214 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHH
Confidence            9999999999999999999999999874             11222                     2458899999999


Q ss_pred             hhcccHH-HHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCC
Q 023896          116 TNYYGTK-QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC  194 (275)
Q Consensus       116 ~N~~~~~-~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (275)
                      +|..+.| .+++++.+.+...++|+||++||+.+..+.                                          
T Consensus       215 vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------------------------------------  252 (418)
T 4eue_A          215 VMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------------------------------------------  252 (418)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------------------------------------------
T ss_pred             HhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------------------------------------------
Confidence            9999998 777877664433446899999998877654                                          


Q ss_pred             CCC--chhhHhHHHHHHHHHHHHHhC-C--CeEEEeecCCeeecCCcCCC
Q 023896          195 PHS--SAYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       195 ~~~--~~Y~~sK~a~~~~~~~~a~~~-~--~i~vn~v~pG~v~T~~~~~~  239 (275)
                      +.+  ..|++||+|+++++++++.|+ +  |||||+|+||+|.|++....
T Consensus       253 p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~i  302 (418)
T 4eue_A          253 KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYI  302 (418)
T ss_dssp             TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTS
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcC
Confidence            555  899999999999999999998 5  79999999999999987544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.98  E-value=2.5e-32  Score=231.08  Aligned_cols=205  Identities=20%  Similarity=0.125  Sum_probs=169.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||++|||++++++|+++|++|++++|+.. .              ..+.++++|++++++++++++++ +.++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            689999999999999999999999999999999874 1              11578899999999999999999 8889


Q ss_pred             CccEEEcCCcccccchhhccch----hHHHHhHHhhcccHHHHHHHHhhhhhcCC---CC---eEEEEecCccccCCCcH
Q 023896           86 KLDILTKGDAEVDWSKVCYQTY----ELAVECLKTNYYGTKQTCEALIPLLELSD---SP---RLVNLSSYVSALKDLPE  155 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g---~iv~vsS~~~~~~~~~~  155 (275)
                      ++|++|||||.....++.+.+.    ++|++.+++|+.+++.+++++.+.|.+++   .+   +||++||..+..+.   
T Consensus        66 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  142 (242)
T 1uay_A           66 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---  142 (242)
T ss_dssp             CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC---
T ss_pred             CceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC---
Confidence            9999999999866554444443    49999999999999999999999998654   33   99999998765443   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             ++...|+++|++++.+++.++.++  .+|++|+|+||+|+|
T Consensus       143 ---------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  183 (242)
T 1uay_A          143 ---------------------------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT  183 (242)
T ss_dssp             ---------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSS
T ss_pred             ---------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcc
Confidence                                                   567899999999999999999998  589999999999999


Q ss_pred             CCcCCC----------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          234 DINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       234 ~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      ++....                ...++++.++.++.++..  ...+|..+..+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~  234 (242)
T 1uay_A          184 PLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLD  234 (242)
T ss_dssp             HHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             hhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCcEEEEc
Confidence            874321                124778888888776664  33556555444

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=8e-33  Score=236.54  Aligned_cols=223  Identities=18%  Similarity=0.151  Sum_probs=154.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||++|||++++++|+++|++|++++|+..+.+.                .+++|+++.++++++++++   +++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------------~~~~Dl~~~~~v~~~~~~~---~~~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------------DLSTAEGRKQAIADVLAKC---SKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHTTC---TTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------------ccccCCCCHHHHHHHHHHh---CCC
Confidence            689999999999999999999999999999998754211                1568999999988877632   289


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH-HHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK-ARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~~~~~~~  165 (275)
                      +|+||||||....       .+.|++.+++|+.+++.++++++|.|++++.++||++||..+......+. ....+... 
T Consensus        63 id~lv~~Ag~~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~-  134 (257)
T 1fjh_A           63 MDGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG-  134 (257)
T ss_dssp             CSEEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT-
T ss_pred             CCEEEECCCCCCC-------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhccc-
Confidence            9999999997541       13489999999999999999999999887779999999988764221100 00000000 


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC----
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                        +.+....            ...+..+.++...|++||++++.+++.++.++  .+|+||+|+||+|+|++....    
T Consensus       135 --~~~~~~~------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~  200 (257)
T 1fjh_A          135 --EEAKARA------------IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP  200 (257)
T ss_dssp             --CHHHHHH------------HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------
T ss_pred             --chhhhhh------------hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch
Confidence              0000000            00111222356789999999999999999998  689999999999999985422    


Q ss_pred             --------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 --------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 --------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                    ...++++.++.++.++..+....+|.++..+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vd  245 (257)
T 1fjh_A          201 RYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVID  245 (257)
T ss_dssp             --------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence                          1246677777766666544444556555544

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=5.6e-31  Score=269.78  Aligned_cols=192  Identities=21%  Similarity=0.265  Sum_probs=162.2

Q ss_pred             cccCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhc-CCCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKG-IGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~g-IG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++|++|||||++| ||++++++|+++|++|+++ .|+..+++...+++... .....++.++++|+++.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4678999999999998 9999999999999999998 68887777776666432 1112348899999999999999999


Q ss_pred             HHHhh-----cC-CccEEEcCCcccccc-hhhccc--hhHHHHhHHhhcccHHHHHHHH--hhhhhcCCCCeEEEEecCc
Q 023896           79 FIKTQ-----FG-KLDILTKGDAEVDWS-KVCYQT--YELAVECLKTNYYGTKQTCEAL--IPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        79 ~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~g~iv~vsS~~  147 (275)
                      ++.+.     || +||+||||||+.... ++.+.+  .++|+++|++|+.+++.+++.+  .|.|.+++.|+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence            99998     67 999999999987665 666777  8999999999999999999998  7888877678999999988


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHH-HHHHHHhC-CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY-TRILAKRY-PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~~a~~~-~~i~vn~  225 (275)
                      +..+                                            +...|++||+++++| ++.++.++ +.|+||+
T Consensus       831 g~~g--------------------------------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNa  866 (1887)
T 2uv8_A          831 GTFG--------------------------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCG  866 (1887)
T ss_dssp             TCSS--------------------------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEE
T ss_pred             hccC--------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            7643                                            356899999999999 89999988 4599999


Q ss_pred             ecCCeee-cCCcC
Q 023896          226 VCPGFVK-TDINF  237 (275)
Q Consensus       226 v~pG~v~-T~~~~  237 (275)
                      |+||+|+ |+|..
T Consensus       867 V~PG~V~tT~m~~  879 (1887)
T 2uv8_A          867 AIIGWTRGTGLMS  879 (1887)
T ss_dssp             EEECCEECC----
T ss_pred             EEecccccccccc
Confidence            9999999 78754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.2e-30  Score=215.65  Aligned_cols=193  Identities=21%  Similarity=0.216  Sum_probs=159.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||+||||++++++|+++  +|++++|+..+.+...+++..        .++++|+++++++++++++    +++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--------~~~~~D~~~~~~~~~~~~~----~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--------RALPADLADELEAKALLEE----AGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--------EECCCCTTSHHHHHHHHHH----HCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--------cEEEeeCCCHHHHHHHHHh----cCC
Confidence            58999999999999999999998  999999999877766655421        6788999999999998876    689


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+||||||.....++.+.+.++|++.+++|+.+++.+++++    .+++.++||++||..+..+.              
T Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~--------------  128 (207)
T 2yut_A           67 LDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQV--------------  128 (207)
T ss_dssp             EEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSS--------------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCC--------------
Confidence            999999999877666667788999999999999999999998    23345799999998765443              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-----C
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----A  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-----~  239 (275)
                                                  ++...|+++|++++.+++.++.++  .++++++|+||++.|++...     .
T Consensus       129 ----------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~  180 (207)
T 2yut_A          129 ----------------------------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPK  180 (207)
T ss_dssp             ----------------------------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSCCT
T ss_pred             ----------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCCCC
Confidence                                        567899999999999999999998  68999999999999987432     2


Q ss_pred             CCCChhhhhccceeecccCC
Q 023896          240 GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ...++++.++.++.++..+.
T Consensus       181 ~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          181 GALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             TCBCHHHHHHHHHHHHC--C
T ss_pred             CCCCHHHHHHHHHHHHhCCC
Confidence            34688888888887776544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=2.1e-30  Score=213.71  Aligned_cols=179  Identities=14%  Similarity=0.144  Sum_probs=155.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+||||++++++|+ +|++|++++|+..                    .+.+|++++++++++++++    +++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            79999999999999999999 9999999999874                    3679999999999888765    789


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |++|||||.....++.+.+.++|++.+++|+.+++.+++++.+.|++  +++||++||..+..+.               
T Consensus        60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~---------------  122 (202)
T 3d7l_A           60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPI---------------  122 (202)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCC---------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCC---------------
Confidence            99999999876666777889999999999999999999999999864  3799999998765443               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCcC------CCC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINF------HAG  240 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~~------~~~  240 (275)
                                                 ++...|+++|++++.+++.++.++ .++++|+|+||++.|++..      ...
T Consensus       123 ---------------------------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~  175 (202)
T 3d7l_A          123 ---------------------------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLEPFFEGFL  175 (202)
T ss_dssp             ---------------------------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHGGGSTTCC
T ss_pred             ---------------------------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhhhhhccccC
Confidence                                       567899999999999999999998 6899999999999998632      123


Q ss_pred             CCChhhhhccceeec
Q 023896          241 ILSVEEGAESPVKLA  255 (275)
Q Consensus       241 ~~~~~~~a~~~~~~~  255 (275)
                      ..++++.++.++..+
T Consensus       176 ~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          176 PVPAAKVARAFEKSV  190 (202)
T ss_dssp             CBCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhh
Confidence            578899988877655

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.4e-31  Score=265.12  Aligned_cols=192  Identities=20%  Similarity=0.247  Sum_probs=162.6

Q ss_pred             cccCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcC-CCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKG-IGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~g-IG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++|++|||||++| ||++++++|+++|++|+++ +|+..+++...+++.... ....++.++++|+++.++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            3578999999999998 9999999999999999998 677776666666664321 112348899999999999999999


Q ss_pred             HHHhh-----cC-CccEEEcCCcccccc-hhhccc--hhHHHHhHHhhcccHHHHHHHH--hhhhhcCCCCeEEEEecCc
Q 023896           79 FIKTQ-----FG-KLDILTKGDAEVDWS-KVCYQT--YELAVECLKTNYYGTKQTCEAL--IPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        79 ~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~g~iv~vsS~~  147 (275)
                      ++.+.     +| +||+||||||+.... ++.+.+  .++|++.|++|+.+++.+++.+  .|.|++++.|+||++||.+
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence            99998     78 999999999987665 566666  8999999999999999999998  8888877678999999987


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHH-HHHHHHhC-CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY-TRILAKRY-PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~~a~~~-~~i~vn~  225 (275)
                      +..+                                            +...|++||+++++| ++.++.++ +.|+||+
T Consensus       632 G~~G--------------------------------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNa  667 (1688)
T 2pff_A          632 GTFG--------------------------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCG  667 (1688)
T ss_dssp             TTSS--------------------------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCC
T ss_pred             hccC--------------------------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence            7643                                            356899999999999 77778877 4599999


Q ss_pred             ecCCeee-cCCcC
Q 023896          226 VCPGFVK-TDINF  237 (275)
Q Consensus       226 v~pG~v~-T~~~~  237 (275)
                      |+||+|+ |+|..
T Consensus       668 VaPG~V~TT~M~~  680 (1688)
T 2pff_A          668 AIIGWTRGTGLMS  680 (1688)
T ss_dssp             CCCCCCCCCSSSC
T ss_pred             EEECcCcCCcccC
Confidence            9999999 78754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=1.1e-30  Score=244.68  Aligned_cols=207  Identities=15%  Similarity=0.078  Sum_probs=171.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEE-ecCh-------------hHHHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLT-ARDE-------------KRGLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      .++++|||||++|||.+++++|+++|++ |+++ +|+.             .++++..+++...+..   +.+++||++|
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---v~~~~~Dvtd  326 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGAT---ATVVTCDLTD  326 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCE---EEEEECCTTS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCE---EEEEECCCCC
Confidence            5799999999999999999999999997 7777 8984             4456666677665433   8899999999


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCcc
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVS  148 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~  148 (275)
                      .+++.++++++. ++++||+||||||+.....+.+.+.++|++.|++|+.|++++.+.+.+.+++++ .++||++||+++
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            999999999988 789999999999998887888899999999999999999999999999997765 689999999998


Q ss_pred             ccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecC
Q 023896          149 ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCP  228 (275)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~p  228 (275)
                      ..+.                                          ++...|+++|+++++|++.++.  .++++++|+|
T Consensus       406 ~~g~------------------------------------------~g~~~YaaaKa~l~~lA~~~~~--~gi~v~sI~p  441 (525)
T 3qp9_A          406 IWGG------------------------------------------AGQGAYAAGTAFLDALAGQHRA--DGPTVTSVAW  441 (525)
T ss_dssp             TTCC------------------------------------------TTCHHHHHHHHHHHHHHTSCCS--SCCEEEEEEE
T ss_pred             cCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEC
Confidence            8765                                          7789999999999988643321  5899999999


Q ss_pred             CeeecCCcCC-----------CCCCChhhhhccceeecccCC
Q 023896          229 GFVKTDINFH-----------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       229 G~v~T~~~~~-----------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      |+++|+|...           ...+++++.++.+...+..+.
T Consensus       442 G~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          442 SPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             CCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             CccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999998732           124788888887776665443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=4.4e-29  Score=255.41  Aligned_cols=211  Identities=20%  Similarity=0.197  Sum_probs=171.8

Q ss_pred             cccCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHh-cCCCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKG-IGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~g-IG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++|++|||||++| ||++++++|+++|++|++++ |+..+++...+++.. ......++.++++|+++.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999 99999999999999999985 777776666555532 22112348899999999999999999


Q ss_pred             HHHhh---cC-CccEEEcCCcccccc-hhhccc--hhHHHHhHHhhcccHHHHHHH--HhhhhhcCCCCeEEEEecCccc
Q 023896           79 FIKTQ---FG-KLDILTKGDAEVDWS-KVCYQT--YELAVECLKTNYYGTKQTCEA--LIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        79 ~~~~~---~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      ++.+.   || +||+||||||+.... ++.+.+  .++|+++|++|+.+++.+++.  +++.|.+++.|+||++||..+.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence            99998   99 999999999987665 666777  799999999999999999987  6788877766899999998876


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHh-C-CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-Y-PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~-~-~~i~vn~v~  227 (275)
                      .+                                            +...|++||+++++|++.++.+ + ++|+||+|+
T Consensus       808 ~g--------------------------------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVa  843 (1878)
T 2uv9_A          808 FG--------------------------------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAV  843 (1878)
T ss_dssp             SS--------------------------------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEE
T ss_pred             cC--------------------------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            53                                            3568999999999999877665 5 459999999


Q ss_pred             CCeee-cCCcCC------------CCCCChhhhhccceeecc
Q 023896          228 PGFVK-TDINFH------------AGILSVEEGAESPVKLAL  256 (275)
Q Consensus       228 pG~v~-T~~~~~------------~~~~~~~~~a~~~~~~~~  256 (275)
                      ||+|+ |+|...            ....+|++.++.++.++.
T Consensus       844 PG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaS  885 (1878)
T 2uv9_A          844 IGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMA  885 (1878)
T ss_dssp             ECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHS
T ss_pred             ecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhC
Confidence            99999 998532            123466777766665543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.7e-27  Score=221.17  Aligned_cols=199  Identities=19%  Similarity=0.157  Sum_probs=163.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++...+..   +.++.||++|.+++.++++++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVR---VTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCe---EEEEEccCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999 8999999743   456666677665433   8999999999999999999887


Q ss_pred             hhcCCccEEEcCCccc-ccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEV-DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +. ++||+||||||+. ....+.+.+.++|++.|++|+.|++++.+.+.+.    ..++||++||+++..+.        
T Consensus       316 ~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~--------  382 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGS--------  382 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTC--------
T ss_pred             Hh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCC--------
Confidence            77 7899999999987 6667778899999999999999999999988764    45799999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC-C
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH-A  239 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~-~  239 (275)
                                                        ++...|+++|+++++|++.++.  .++++|+|+||++.|..+.. .
T Consensus       383 ----------------------------------~g~~~YaAaKa~ldala~~~~~--~Gi~v~sV~pG~w~~~gm~~~~  426 (496)
T 3mje_A          383 ----------------------------------GGQPGYAAANAYLDALAEHRRS--LGLTASSVAWGTWGEVGMATDP  426 (496)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHH--TTCCCEEEEECEESSSCC----
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHh--cCCeEEEEECCcccCCccccCh
Confidence                                              7788999999999999987654  49999999999996654321 1


Q ss_pred             -----------CCCChhhhhccceeecc
Q 023896          240 -----------GILSVEEGAESPVKLAL  256 (275)
Q Consensus       240 -----------~~~~~~~~a~~~~~~~~  256 (275)
                                 ..+++++..+.+.+.+.
T Consensus       427 ~~~~~l~~~g~~~l~pe~~~~~l~~~l~  454 (496)
T 3mje_A          427 EVHDRLVRQGVLAMEPEHALGALDQMLE  454 (496)
T ss_dssp             --CHHHHHTTEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCHHHHHHHHHHHHc
Confidence                       12566666665555444

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=2.5e-28  Score=207.74  Aligned_cols=222  Identities=21%  Similarity=0.111  Sum_probs=159.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||+||||++++++|+++|++|++++|+..+.+.                .+.+|+++.++++++++++   .++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~~~~~---~~~   62 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAVLDRC---GGV   62 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHHHH---TTC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHHHHHc---CCC
Confidence            589999999999999999999999999999998754210                1568999999988888754   378


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+||||||....       .+.+++.+++|+.+++++++++.+.|++++.++||++||..+..+.......  ..+...
T Consensus        63 ~d~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~--~~~~~~  133 (255)
T 2dkn_A           63 LDGLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPM--VEAMLA  133 (255)
T ss_dssp             CSEEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHH--HHHHHH
T ss_pred             ccEEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccch--hhhhcc
Confidence            9999999997542       2458899999999999999999999987777899999998876543110000  000000


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC-----
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                      .+++.....             .+. ..++...|+.+|++++.+++.++.++  .++++++|+||++.|++....     
T Consensus       134 ~~~~~~~~~-------------~~~-~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~  199 (255)
T 2dkn_A          134 GDEARAIEL-------------AEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR  199 (255)
T ss_dssp             TCHHHHHHH-------------HHH-HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT
T ss_pred             cchhhhhhh-------------ccc-cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh
Confidence            000000000             000 01345789999999999999999997  689999999999999863210     


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                                   ...++++.++.++.++..+....+|..|..+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  243 (255)
T 2dkn_A          200 YGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVD  243 (255)
T ss_dssp             THHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEec
Confidence                         1357788888777766654334455555443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=2.2e-27  Score=232.06  Aligned_cols=177  Identities=20%  Similarity=0.247  Sum_probs=156.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHH-HCCC-EEEEEecC---hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLA-SKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~-~~g~-~vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      .+|++|||||++|||++++++|+ ++|+ +|++++|+   .++.++..+++...+..   +.+++||+++++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~---v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE---VSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHHHHH
Confidence            57999999999999999999999 7999 59999999   44566777777765543   89999999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.+.+ +||+||||||+.....+.+.+.++|+..|++|+.|++++.+++.|.|      +||++||+++..+.       
T Consensus       606 ~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~-------  671 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGS-------  671 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTC-------
T ss_pred             HHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCC-------
Confidence            98876 99999999999888888899999999999999999999999998876      89999999988765       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                         ++...|+++|++++.|++.++.  .|+++|+|+||++.|++
T Consensus       672 -----------------------------------~g~~~YaAaka~~~alA~~~~~--~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          672 -----------------------------------GGQGNYAAANSFLDALAQQRQS--RGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             -----------------------------------SSCHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCCSCCC
T ss_pred             -----------------------------------CCCHHHHHHHHHHHHHHHHHHH--cCCeEEEEECCeECcch
Confidence                                               7889999999877777766554  49999999999999875

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=8.7e-28  Score=256.43  Aligned_cols=222  Identities=17%  Similarity=0.154  Sum_probs=163.9

Q ss_pred             ccCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            3 EATKKYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         3 ~~~~k~vlItGa~~g-IG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+..+     +++..+++...+   .++..+++|++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G---~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD---ATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT---CEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHH
Confidence            368999999999999 9999999999999999999998766     444444443332   2378899999999999999


Q ss_pred             HHHHHh----hcCCccEEEcCCcc----ccc-chhhccchhHHHHh----HHhhcccHHHHHHHHhhhhhcCCCC----e
Q 023896           77 ADFIKT----QFGKLDILTKGDAE----VDW-SKVCYQTYELAVEC----LKTNYYGTKQTCEALIPLLELSDSP----R  139 (275)
Q Consensus        77 ~~~~~~----~~g~id~li~~ag~----~~~-~~~~~~~~~~~~~~----~~~N~~~~~~l~~~~~~~~~~~~~g----~  139 (275)
                      ++++.+    .||+||+||||||+    ... ....+.+.++|+..    +++|+.+++.+++.+.+.|.+.+.+    .
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence            999998    89999999999997    222 11222344555444    9999999999999999999876543    2


Q ss_pred             EEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHh--
Q 023896          140 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR--  217 (275)
Q Consensus       140 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~--  217 (275)
                      |+++|+..+..                                            ++...|++||+|+++|+|+++.|  
T Consensus      2290 i~~~ss~~g~~--------------------------------------------g~~~aYsASKaAl~~LtrslA~E~~ 2325 (3089)
T 3zen_D         2290 VLPGSPNRGMF--------------------------------------------GGDGAYGEAKSALDALENRWSAEKS 2325 (3089)
T ss_dssp             EEEECSSTTSC--------------------------------------------SSCSSHHHHGGGHHHHHHHHHHCST
T ss_pred             EEECCcccccC--------------------------------------------CCchHHHHHHHHHHHHHHHHHhccc
Confidence            23333322211                                            33568999999999999999999  


Q ss_pred             C-CCeEEEeecCCeee-cCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCccc
Q 023896          218 Y-PKFCVNCVCPGFVK-TDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  273 (275)
Q Consensus       218 ~-~~i~vn~v~pG~v~-T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a  273 (275)
                      + ++|+||+|+||+|+ |++..... ...+.....+.+. .+|++++....||+++.+
T Consensus      2326 ~a~~IrVn~v~PG~v~tT~l~~~~~-~~~~~~~~~~~r~-~~PeEIA~avlfLaS~~a 2381 (3089)
T 3zen_D         2326 WAERVSLAHALIGWTKGTGLMGQND-AIVSAVEEAGVTT-YTTDEMAAMLLDLCTVET 2381 (3089)
T ss_dssp             TTTTEEEEEEECCCEECSTTTTTTT-TTHHHHGGGSCBC-EEHHHHHHHHHHTTSHHH
T ss_pred             cCCCeEEEEEeecccCCCcccccch-hHHHHHHhcCCCC-CCHHHHHHHHHHHhChhh
Confidence            6 78999999999999 77653221 1122222223322 356677777777777654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=1.2e-26  Score=199.72  Aligned_cols=205  Identities=16%  Similarity=0.024  Sum_probs=156.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|++|||||+||||++++++|+++|++|++++|+..+..            ...+.++.+|+++.+++.++++      
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            4689999999999999999999999999999999875422            1238899999999999888876      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+||||||..        +.+.|++.+++|+.+++++++++.+    ++.++||++||..+.....           
T Consensus        64 -~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~-----------  119 (267)
T 3rft_A           64 -GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYP-----------  119 (267)
T ss_dssp             -TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSB-----------
T ss_pred             -CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCC-----------
Confidence             799999999973        3456889999999999999999844    4568999999977652210           


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC---CC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA---GI  241 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~---~~  241 (275)
                                         ....+.+..+.++...|+.||.+++.+++.++.++ ++++++|.||.|.+++....   ..
T Consensus       120 -------------------~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~-g~~~~~vr~~~v~~~~~~~~~~~~~  179 (267)
T 3rft_A          120 -------------------QTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF-GQETALVRIGSCTPEPNNYRMLSTW  179 (267)
T ss_dssp             -------------------TTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECBCSSSCCSTTHHHHB
T ss_pred             -------------------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCeEEEEEeecccCCCCCCCceeeE
Confidence                               01123344455677899999999999999999885 67777777777766654321   23


Q ss_pred             CChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          242 LSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       242 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      +++++.++.+...+ .+.+.....+|+.++.
T Consensus       180 ~~~~d~a~~~~~~~-~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          180 FSHDDFVSLIEAVF-RAPVLGCPVVWGASAN  209 (267)
T ss_dssp             CCHHHHHHHHHHHH-HCSCCCSCEEEECCCC
T ss_pred             EcHHHHHHHHHHHH-hCCCCCceEEEEeCCC
Confidence            67777776655444 3555556677776654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=2.8e-26  Score=213.13  Aligned_cols=202  Identities=21%  Similarity=0.166  Sum_probs=164.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++...+.   ++.++.+|++|.+++.++++++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~---~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA---RTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC---EEEEEEeCCCCHHHHHHHHHHH
Confidence            478999999999999999999999999 5999999875   34556666665543   3889999999999999999988


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                       ..+++||+||||||+.....+.+.+.+++++.+++|+.|++++.+.+.+    .+.++||++||+++..+.        
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~--------  368 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGA--------  368 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCC--------
T ss_pred             -HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCC--------
Confidence             6678999999999988777777889999999999999999999998765    355899999998877654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC-CcCC-
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD-INFH-  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~-~~~~-  238 (275)
                                                        ++...|+++|++++.+++.++.  .++++++|+||++.|+ |... 
T Consensus       369 ----------------------------------~g~~~Yaaaka~l~~la~~~~~--~gi~v~~i~pG~~~~~gm~~~~  412 (486)
T 2fr1_A          369 ----------------------------------PGLGGYAPGNAYLDGLAQQRRS--DGLPATAVAWGTWAGSGMAEGP  412 (486)
T ss_dssp             ----------------------------------TTCTTTHHHHHHHHHHHHHHHH--TTCCCEEEEECCBC--------
T ss_pred             ----------------------------------CCCHHHHHHHHHHHHHHHHHHh--cCCeEEEEECCeeCCCcccchh
Confidence                                              6678999999999999887654  4899999999999876 4321 


Q ss_pred             ---------CCCCChhhhhccceeecccC
Q 023896          239 ---------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~  258 (275)
                               ...+++++.++.+...+...
T Consensus       413 ~~~~~~~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          413 VADRFRRHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             ----CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence                     12467888877776665543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=1.1e-25  Score=210.01  Aligned_cols=199  Identities=15%  Similarity=0.145  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++...+.   ++.++.||++|.+++.+++++ 
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~---~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC---EVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC---EEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC---EEEEEEeCCCCHHHHHHHHhc-
Confidence            478999999999999999999999999 6999999874   34556666665433   388999999999999988876 


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          +++|+||||||+.....+.+.+.++++..+++|+.|++++.+.+.+.   .+.++||++||+++..+.        
T Consensus       334 ----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~--------  398 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGN--------  398 (511)
T ss_dssp             ----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCC--------
T ss_pred             ----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCC--------
Confidence                68999999999987777778899999999999999999999887542   145799999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee-ecCCcCC-
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV-KTDINFH-  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v-~T~~~~~-  238 (275)
                                                        ++...|+++|++++.+++.++  ..++++++|+||++ +|+|... 
T Consensus       399 ----------------------------------~g~~~YaaaKa~ld~la~~~~--~~gi~v~sv~pG~~~~tgm~~~~  442 (511)
T 2z5l_A          399 ----------------------------------AGQGAYAAANAALDALAERRR--AAGLPATSVAWGLWGGGGMAAGA  442 (511)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHH--TTTCCCEEEEECCBCSTTCCCCH
T ss_pred             ----------------------------------CCCHHHHHHHHHHHHHHHHHH--HcCCcEEEEECCcccCCcccccc
Confidence                                              677899999999999999764  35899999999999 7887632 


Q ss_pred             ---------CCCCChhhhhccceeecccC
Q 023896          239 ---------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~  258 (275)
                               ...+++++.++.++..+...
T Consensus       443 ~~~~~~~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          443 GEESLSRRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             cHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence                     23578888887777665543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=3.3e-24  Score=180.78  Aligned_cols=191  Identities=17%  Similarity=0.147  Sum_probs=144.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCce-eEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL-LFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|++|||||+|+||++++++|+++|++|++++|+..+.+....    .     .+ .++++|++         +.+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~-----~~~~~~~~Dl~---------~~~   78 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R-----GASDIVVANLE---------EDF   78 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T-----TCSEEEECCTT---------SCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C-----CCceEEEcccH---------HHH
Confidence            56789999999999999999999999999999999999987655432    1     17 88999999         234


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||||...        .+++++.+++|+.+++++++++..    .+.++||++||..+..+.        
T Consensus        79 ~~~~~~~D~vi~~ag~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~--------  138 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGP--------HTGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPD--------  138 (236)
T ss_dssp             GGGGTTCSEEEECCCCCT--------TSCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGG--------
T ss_pred             HHHHcCCCEEEECCCCCC--------CCCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCC--------
Confidence            455678999999999653        246889999999999999999854    345799999996544221        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC--
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH--  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~--  238 (275)
                                                    ..+ ++...|+.+|.+++.+++     ..+++++.++||++.|+....  
T Consensus       139 ------------------------------~~~-~~~~~Y~~sK~~~e~~~~-----~~gi~~~~lrpg~v~~~~~~~~~  182 (236)
T 3e8x_A          139 ------------------------------QGP-MNMRHYLVAKRLADDELK-----RSSLDYTIVRPGPLSNEESTGKV  182 (236)
T ss_dssp             ------------------------------GSC-GGGHHHHHHHHHHHHHHH-----HSSSEEEEEEECSEECSCCCSEE
T ss_pred             ------------------------------CCh-hhhhhHHHHHHHHHHHHH-----HCCCCEEEEeCCcccCCCCCCeE
Confidence                                          011 245789999999999887     258999999999999986421  


Q ss_pred             ---------CCCCChhhhhccceeecccCCCCCcceEec
Q 023896          239 ---------AGILSVEEGAESPVKLALLPDGGPTGRFFL  268 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~  268 (275)
                               ....++++.++.++.++..+.  ..+..|.
T Consensus       183 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  219 (236)
T 3e8x_A          183 TVSPHFSEITRSITRHDVAKVIAELVDQQH--TIGKTFE  219 (236)
T ss_dssp             EEESSCSCCCCCEEHHHHHHHHHHHTTCGG--GTTEEEE
T ss_pred             EeccCCCcccCcEeHHHHHHHHHHHhcCcc--ccCCeEE
Confidence                     234678888888887776554  3444443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=3.9e-23  Score=183.02  Aligned_cols=185  Identities=18%  Similarity=0.107  Sum_probs=143.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++|||||+|+||++++++|+++|++|++++|+..+.....+.+......  .+.++.+|+++.+++.+++++     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK--TPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC--CCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC--CceEEEeecCCHHHHHHHHhc-----
Confidence            5789999999999999999999999999999999877655555555432221  278899999999999888875     


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+|||+||......    ..+...+.+++|+.+++++++++..    .+.++||++||.......            
T Consensus        77 ~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~------------  136 (341)
T 3enk_A           77 HPITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVP------------  136 (341)
T ss_dssp             SCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSC------------
T ss_pred             cCCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCC------------
Confidence            47999999999765432    3344567889999999998887643    455799999996544211            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                         ....+.+..+..+...|+.+|.+.+.+++.++.++++++++.+.||.+..+.
T Consensus       137 -------------------~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          137 -------------------ERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAH  188 (341)
T ss_dssp             -------------------SSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             -------------------CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence                               0111333444456789999999999999999999888999999999998763

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.89  E-value=2.3e-22  Score=179.17  Aligned_cols=167  Identities=19%  Similarity=0.202  Sum_probs=137.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC-CC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK-GI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~-g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+|+||++++++|+++ |+ +|++++|+..+.....+.+..     ..+.++.+|++|.+++.++++   
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-----PRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-----TTEEEEECCTTCHHHHHHHTT---
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-----CCEEEEECCCCCHHHHHHHHh---
Confidence            57899999999999999999999999 98 999999998877666555532     238899999999988777664   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+||..... .   ......+.+++|+.++.++++++.+.    +.+++|++||..+.            
T Consensus        91 ----~~D~Vih~Aa~~~~~-~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~------------  146 (344)
T 2gn4_A           91 ----GVDICIHAAALKHVP-I---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAA------------  146 (344)
T ss_dssp             ----TCSEEEECCCCCCHH-H---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGS------------
T ss_pred             ----cCCEEEECCCCCCCC-c---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccC------------
Confidence                799999999975432 1   22345688999999999999999774    45799999995543            


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                       .+...|+.+|++++.+++.++.++  .+++++++.||.|.++.
T Consensus       147 ---------------------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          147 ---------------------------------NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             ---------------------------------SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence                                             234689999999999999999876  58999999999998753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.88  E-value=3.6e-22  Score=176.51  Aligned_cols=202  Identities=19%  Similarity=0.094  Sum_probs=140.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEE-EecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH-QLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++++|||||+|+||++++++|+++|++|++++|+..+.+...+.+.....  .++.++ .+|+++.+++.++++   
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTT---
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCcChHHHHHHHc---
Confidence            34689999999999999999999999999999999998876655554433211  127777 799999988766654   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH--HHh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK--ARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~--~~~  159 (275)
                          ++|+|||+||.....       +++++.+++|+.++.++++++.+.   .+.++||++||........+..  ...
T Consensus        83 ----~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             ----CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence                799999999875432       356789999999999999998752   2347999999976652211000  000


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~~  236 (275)
                      ...++.....+.   ....          ....+..+...|+.+|.+.+.+++.++.++ ++++++++.||.+.++..
T Consensus       149 ~E~~~~~~~~~~---~~~~----------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~  213 (342)
T 1y1p_A          149 DEKSWNLESIDK---AKTL----------PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             CTTCCCHHHHHH---HHHS----------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred             CccccCchhhhh---hccc----------cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCC
Confidence            000000000000   0000          000011234689999999999999999887 589999999999999864

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.88  E-value=4.2e-23  Score=174.35  Aligned_cols=156  Identities=17%  Similarity=0.093  Sum_probs=125.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+||||++++++|+++|+  +|++++|+..+.+...    .     ..+.++.+|+++.+++.++++   
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~-----~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y-----KNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G-----GGCEEEECCGGGGGGGGGGGS---
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c-----CCceEEecCcCCHHHHHHHhc---
Confidence            5689999999999999999999999999  9999999876432211    0     127788999999988776654   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+||||||....       .+.+++.+++|+.+++.+++++.+    .+.++||++||..+..           
T Consensus        84 ----~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~-----------  137 (242)
T 2bka_A           84 ----GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK-----------  137 (242)
T ss_dssp             ----SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT-----------
T ss_pred             ----CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC-----------
Confidence                79999999996432       134678899999999999987643    4557999999976542           


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCe-EEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-CVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i-~vn~v~pG~v~T~~  235 (275)
                                                       ++...|+.+|++++.+++.+     ++ ++++|+||++.|++
T Consensus       138 ---------------------------------~~~~~Y~~sK~~~e~~~~~~-----~~~~~~~vrpg~v~~~~  174 (242)
T 2bka_A          138 ---------------------------------SSNFLYLQVKGEVEAKVEEL-----KFDRYSVFRPGVLLCDR  174 (242)
T ss_dssp             ---------------------------------TCSSHHHHHHHHHHHHHHTT-----CCSEEEEEECCEEECTT
T ss_pred             ---------------------------------CCcchHHHHHHHHHHHHHhc-----CCCCeEEEcCceecCCC
Confidence                                             23468999999999998765     45 89999999999985

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=7.4e-22  Score=164.70  Aligned_cols=188  Identities=10%  Similarity=0.038  Sum_probs=135.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHH-HCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~-~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|++|||||+||||++++++|+ ++|++|++++|+.+ +++...    ...   ..+.++++|+++.+++.++++     
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~~D~~d~~~~~~~~~-----   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDH---ERVTVIEGSFQNPGXLEQAVT-----   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTS---TTEEEEECCTTCHHHHHHHHT-----
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCC---CceEEEECCCCCHHHHHHHHc-----
Confidence            3789999999999999999999 89999999999987 544432    122   228899999999999888775     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+||||+|..                   |+.     .+.+++.|++.+.++||++||..+..+.....       
T Consensus        73 --~~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-------  119 (221)
T 3r6d_A           73 --NAEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-------  119 (221)
T ss_dssp             --TCSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-------
T ss_pred             --CCCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-------
Confidence              789999999853                   221     67777778777778999999977654321000       


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCc-hhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC-CcCCC--
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD-INFHA--  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~-~~~~~--  239 (275)
                                   ..+         ..    +... .|+.+|.+++.+++.     .+++++.|+||++.++ .....  
T Consensus       120 -------------~~~---------~~----~~~~~~y~~~K~~~e~~~~~-----~~i~~~~vrpg~v~~~~~~~~~~~  168 (221)
T 3r6d_A          120 -------------EKW---------TF----DNLPISYVQGERQARNVLRE-----SNLNYTILRLTWLYNDPEXTDYEL  168 (221)
T ss_dssp             -------------HHH---------HH----HTSCHHHHHHHHHHHHHHHH-----SCSEEEEEEECEEECCTTCCCCEE
T ss_pred             -------------ccc---------cc----cccccHHHHHHHHHHHHHHh-----CCCCEEEEechhhcCCCCCcceee
Confidence                         000         00    1123 799999999988864     5899999999999887 32111  


Q ss_pred             ---------CCCChhhhhccceeec--ccCCCCCcceEecc
Q 023896          240 ---------GILSVEEGAESPVKLA--LLPDGGPTGRFFLR  269 (275)
Q Consensus       240 ---------~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~  269 (275)
                               ...++++.++.++.++  ..+....+..+.+.
T Consensus       169 ~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          169 IPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVG  209 (221)
T ss_dssp             ECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEE
T ss_pred             ccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeec
Confidence                     1356788888888877  65554444444443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=8e-22  Score=175.84  Aligned_cols=186  Identities=19%  Similarity=0.013  Sum_probs=142.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++++||||||+|+||++++++|+++|++|++++|+..+.....+.+. .   ...+.++.+|+++.+++.++++..   
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-V---ADGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-T---TTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-c---CCceEEEEccccCHHHHHHHHHhc---
Confidence            467999999999999999999999999999999998765443333322 1   123788999999999998888765   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+||....    ..+.+++++.+++|+.++.++++++.+.   .+.++||++||.........         
T Consensus        80 --~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~---------  141 (357)
T 1rkx_A           80 --QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEW---------  141 (357)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCS---------
T ss_pred             --CCCEEEECCCCccc----ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCc---------
Confidence              69999999986322    2345678899999999999999999763   22479999999754321100         


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC--------CeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--------KFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--------~i~vn~v~pG~v~T~~  235 (275)
                                           ...+.+..+..+...|+.+|.+.+.+++.++.++.        +++++++.||++.++.
T Consensus       142 ---------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          142 ---------------------IWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             ---------------------SSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ---------------------CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence                                 00122223335678899999999999999998863        8999999999999874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=2.5e-21  Score=171.51  Aligned_cols=198  Identities=15%  Similarity=0.030  Sum_probs=141.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+... .   ++.++.+|+++.+++.++++..     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~---~~~~~~~Dl~d~~~~~~~~~~~-----   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-G---NFEFVHGDIRNKNDVTRLITKY-----   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-C---CCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-C---ceEEEEcCCCCHHHHHHHHhcc-----
Confidence            4799999999999999999999999999999864 2223333444432 1   2778899999999988888752     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|||+||....    ..+.+++++.+++|+.++.++++++.+...   .++||++||............  ...+..
T Consensus        73 ~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~--~e~~~~  143 (347)
T 1orr_A           73 MPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKY--NETETR  143 (347)
T ss_dssp             CCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCE--EECSSC
T ss_pred             CCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCc--cccccc
Confidence            69999999996542    124567888999999999999999988652   269999999654322100000  000000


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                   |........+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||+|.++..
T Consensus       144 -------------~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          144 -------------YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             -------------EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTC
T ss_pred             -------------ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEccCceeCcCC
Confidence                         0000000112333344567899999999999999998886 89999999999998864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=1.7e-22  Score=216.25  Aligned_cols=177  Identities=20%  Similarity=0.173  Sum_probs=133.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHH---HHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRG---LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+|++|||||++|||+++++.|+++|++ |++++|+..+.   ....+++...+.   ++.++++|+++.++++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~---~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGV---QVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTC---EEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCC---EEEEEecCCCCHHHHHHHHHHH
Confidence            5799999999999999999999999996 88899986543   344455544432   3888999999999999999988


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      . .+|+||+||||||+....++.+.+.++|++.+++|+.|++++.+.+.+.|.+.  ++||++||+++..+.        
T Consensus      1960 ~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~-------- 2028 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGN-------- 2028 (2512)
T ss_dssp             H-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTC--------
T ss_pred             H-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCC--------
Confidence            6 48999999999998777777888999999999999999999999999988643  799999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV  231 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v  231 (275)
                                                        ++...|+++|+++++|+++.+.+  |....++..|.+
T Consensus      2029 ----------------------------------~g~~~Y~aaKaal~~l~~~rr~~--Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2029 ----------------------------------AGQANYGFANSAMERICEKRRHD--GLPGLAVQWGAI 2063 (2512)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHT--TSCCCEEEECCB
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHHC--CCcEEEEEccCc
Confidence                                              67889999999999999988776  333444444444

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=5.8e-21  Score=172.53  Aligned_cols=193  Identities=17%  Similarity=0.087  Sum_probs=139.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHH-HCCCEEEEEecChhH---------HHHHHHHHHhcCCC--CCc---eeEEEecccCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEKR---------GLEAVEKLKASGVD--PEL---LLFHQLDISDL   70 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~-~~g~~vi~~~r~~~~---------~~~~~~~l~~~~~~--~~~---~~~~~~Dl~~~   70 (275)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+...+.+......  ...   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999997654         33333323332211  112   77889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL  150 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  150 (275)
                      +++.+++++    ++++|+|||+||.....    .+.+++++.+++|+.+++++++++..    .+.++||++||.... 
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v~-  148 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIF-  148 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGT-
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHHh-
Confidence            998777653    46699999999975432    14567888999999999999998743    345799999995433 


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCe
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGF  230 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~  230 (275)
                      +......  .                     +.....+.+..+..+...|+.+|.+.+.+++.++.++ +++++++.||+
T Consensus       149 g~~~~~~--~---------------------~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilRp~~  204 (397)
T 1gy8_A          149 GNPTMGS--V---------------------STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFN  204 (397)
T ss_dssp             BSCCC----------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECE
T ss_pred             CCCCccc--c---------------------cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-CCcEEEEeccc
Confidence            2110000  0                     0001123333444556799999999999999999886 89999999999


Q ss_pred             eecCC
Q 023896          231 VKTDI  235 (275)
Q Consensus       231 v~T~~  235 (275)
                      |..+.
T Consensus       205 v~G~~  209 (397)
T 1gy8_A          205 ACGAH  209 (397)
T ss_dssp             EECCC
T ss_pred             eeCCC
Confidence            98764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=1.3e-21  Score=173.68  Aligned_cols=192  Identities=15%  Similarity=0.021  Sum_probs=146.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHH-HCCCEEEEEecChhH------------HHHHHHHHHhcCCCCCceeEEEecccCh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEKR------------GLEAVEKLKASGVDPELLLFHQLDISDL   70 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~-~~g~~vi~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~   70 (275)
                      ..+|+||||||++|||++.+..|+ ..|+.++++.+..+.            .....+.+...+..   ...++||+++.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~---a~~i~~Dv~d~  124 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLY---SVTIDGDAFSD  124 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCC---EEEEESCTTSH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCC---ceeEeCCCCCH
Confidence            356999999999999999999999 679999998875432            23344555555554   88999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccchh----------------------------------hccchhHHHHh---
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSKV----------------------------------CYQTYELAVEC---  113 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~----------------------------------~~~~~~~~~~~---  113 (275)
                      ++++++++++.+++|+||+||||++.......                                  ...+.++++.+   
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            99999999999999999999999986532110                                  01233444444   


Q ss_pred             HHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCC
Q 023896          114 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW  193 (275)
Q Consensus       114 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (275)
                      |....++.+...+...+.|.  +++++|.+|++......                         +.              
T Consensus       205 Mg~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~-------------------------P~--------------  243 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQ-------------------------AL--------------  243 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGH-------------------------HH--------------
T ss_pred             HhhhHHHHHHHHHHhhhccc--CCceEEEEeccCcceee-------------------------cC--------------
Confidence            44456666777777778775  45799999997654321                         00              


Q ss_pred             CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCCC
Q 023896          194 CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       194 ~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                       .+...++++|++|+..+|.|+.++.++++|.++||.+.|.-....+
T Consensus       244 -Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          244 -YRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             -HTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCCTTGGGSS
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCccccchhhcCC
Confidence             2345789999999999999999998899999999999998765443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.87  E-value=1e-21  Score=173.79  Aligned_cols=185  Identities=17%  Similarity=0.077  Sum_probs=137.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|++|||||+|+||++++++|+++|++|++++|+..+...  ..+..... ...+.++.+|+++.+++.++++.+   
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKV---   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc-cCceeEEECCCCCHHHHHHHHHhc---
Confidence            357899999999999999999999999999999998764321  11222211 123788899999999999888766   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+||....    +.+.+++++.+++|+.+++++++++.. +.  ..++||++||........          
T Consensus        75 --~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~--~~~~iv~~SS~~vyg~~~----------  135 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-VK--PDTKFYQASTSEMFGKVQ----------  135 (345)
T ss_dssp             --CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-HC--TTCEEEEEEEGGGGCSCS----------
T ss_pred             --CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-hC--CCceEEEEechhhcCCCC----------
Confidence              79999999997532    234567889999999999999999975 21  137999999975432110          


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC-----CeEEEeecCCeeecC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-----KFCVNCVCPGFVKTD  234 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-----~i~vn~v~pG~v~T~  234 (275)
                                           ...+.+..+..+...|+.+|.+.+.+++.++.++.     .+.+|.+.||.+.|.
T Consensus       136 ---------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~  190 (345)
T 2z1m_A          136 ---------------------EIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEF  190 (345)
T ss_dssp             ---------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS
T ss_pred             ---------------------CCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcc
Confidence                                 01123334445678999999999999999988752     346678889987664

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=1.5e-20  Score=170.04  Aligned_cols=199  Identities=17%  Similarity=0.068  Sum_probs=136.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH----------------HHHHHHhcCCCCCceeEEEeccc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE----------------AVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~----------------~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      ++++||||||+|+||++++++|+++|++|++++|+......                ....+.....  ..+.++.+|++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~Dl~   87 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDIC   87 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC--CceEEEECCCC
Confidence            56899999999999999999999999999999987653211                1111111111  12788899999


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCc
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYV  147 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~  147 (275)
                      +.+++.++++..     ++|+|||+||...... ...+++.+.+.+++|+.++.++++++.+.    +. .+||++||..
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~  157 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG  157 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence            999998888755     6999999999754322 22356667889999999999999998653    22 4999999965


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhh-hhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEee
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE-IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCV  226 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v  226 (275)
                      .......+ .  ...++.  .             . ..+. -....+..+...|+.+|.+.+.+++.++.++ +++++++
T Consensus       158 vyg~~~~~-~--~E~~~~--~-------------~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~iv  217 (404)
T 1i24_A          158 EYGTPNID-I--EEGYIT--I-------------T-HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDL  217 (404)
T ss_dssp             GGCCCSSC-B--CSSEEE--E-------------E-ETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred             HhCCCCCC-C--Cccccc--c-------------c-cccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-CCeEEEE
Confidence            43211000 0  000000  0             0 0000 0000123456789999999999999998876 8999999


Q ss_pred             cCCeeecCC
Q 023896          227 CPGFVKTDI  235 (275)
Q Consensus       227 ~pG~v~T~~  235 (275)
                      .||.|.++.
T Consensus       218 rp~~v~Gp~  226 (404)
T 1i24_A          218 NQGVVYGVK  226 (404)
T ss_dssp             EECEEECSC
T ss_pred             ecceeeCCC
Confidence            999998875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.87  E-value=3.2e-21  Score=169.32  Aligned_cols=177  Identities=20%  Similarity=0.132  Sum_probs=138.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.+++|||||+|+||++++++|+++|++|++++|+... +.    +        .+.++.+|+++.+++.++++.     
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHHHHh-----
Confidence            45899999999999999999999999999999998754 11    1        278889999999998888875     


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+|||+||.....    .+.+++++.+++|+.++.++++++ +.+.  +.++||++||........+          
T Consensus        73 ~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~~----------  135 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMILP----------  135 (321)
T ss_dssp             HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCCG----------
T ss_pred             cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCCC----------
Confidence            3799999999975431    244578899999999999999999 5442  3579999999764322100          


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                         ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++..
T Consensus       136 -------------------~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          136 -------------------EESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY-GMDIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             -------------------GGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTC
T ss_pred             -------------------CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc-CCCEEEEEeCcccCcCC
Confidence                               01123344444567899999999999999998874 89999999999988764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.86  E-value=2.3e-21  Score=172.70  Aligned_cols=184  Identities=17%  Similarity=0.029  Sum_probs=139.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ++++++|||||+|+||++++++|+++|++|++++|+...    ++...+.+....  ...+.++.+|+++.+++.++++ 
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ--WSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH--HTTEEEEECCTTSHHHHHHHHT-
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc--CCceEEEECCCCCHHHHHHHhc-
Confidence            467899999999999999999999999999999997642    222222211100  0128889999999988777765 


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                            ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+    .+.++||++||.....+..      
T Consensus       102 ------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~------  161 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHP------  161 (352)
T ss_dssp             ------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCC------
T ss_pred             ------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCC------
Confidence                  799999999965432    24467888999999999999999865    2457999999976543210      


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                               ...+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||++.++..
T Consensus       162 -------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          162 -------------------------GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             -------------------------CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTTC
T ss_pred             -------------------------CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEEECceeCcCC
Confidence                                     0112333444557799999999999999998875 89999999999988753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.86  E-value=3e-21  Score=170.56  Aligned_cols=181  Identities=19%  Similarity=0.117  Sum_probs=135.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++..    ...+.++.+|+++.+++.+++.  
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~--   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED----DPRYTFVKGDVADYELVKELVR--   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHH--
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc----CCceEEEEcCCCCHHHHHHHhh--
Confidence            35679999999999999999999996  89999998642  11111 11111    1238889999999998887762  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           ++|+|||+||....    ..+.+++++.+++|+.++.++++++.+.   ...++||++||........       
T Consensus        75 -----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~-------  135 (336)
T 2hun_A           75 -----KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDIL-------  135 (336)
T ss_dssp             -----TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCS-------
T ss_pred             -----CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCC-------
Confidence                 79999999997542    1245677889999999999999999875   2236999999965321110       


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                              ...+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.|.++..
T Consensus       136 ------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          136 ------------------------KGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY-NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             ------------------------SSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEEEEECEEESTTC
T ss_pred             ------------------------CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeeeeeCcCC
Confidence                                    0112233344567799999999999999999886 89999999999998764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=5.9e-21  Score=161.55  Aligned_cols=192  Identities=16%  Similarity=0.054  Sum_probs=138.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++|++|||||+|+||++++++|+++  |++|++.+|+..+.+..       .   ..+.++.+|+++.+++.++++   
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~---~~~~~~~~D~~d~~~~~~~~~---   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------G---GEADVFIGDITDADSINPAFQ---   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------T---CCTTEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------C---CCeeEEEecCCCHHHHHHHHc---
Confidence            45789999999999999999999999  89999999998654322       1   126788999999998887765   


Q ss_pred             hhcCCccEEEcCCcccccchh---------hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           82 TQFGKLDILTKGDAEVDWSKV---------CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                          ++|+|||+||.......         .+...+.+++.+++|+.++.++++++...    +.++||++||..+..+.
T Consensus        69 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~  140 (253)
T 1xq6_A           69 ----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPD  140 (253)
T ss_dssp             ----TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTT
T ss_pred             ----CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCC
Confidence                68999999987543211         12334556678899999999999987653    45799999997754321


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                      .+                                 .   . +.....|+.+|.+++.+++.     .++++++++||++.
T Consensus       141 ~~---------------------------------~---~-~~~~~~y~~sK~~~e~~~~~-----~~i~~~~vrpg~v~  178 (253)
T 1xq6_A          141 HP---------------------------------L---N-KLGNGNILVWKRKAEQYLAD-----SGTPYTIIRAGGLL  178 (253)
T ss_dssp             CG---------------------------------G---G-GGGGCCHHHHHHHHHHHHHT-----SSSCEEEEEECEEE
T ss_pred             Cc---------------------------------c---c-cccchhHHHHHHHHHHHHHh-----CCCceEEEecceee
Confidence            00                                 0   0 01113578899999988763     68999999999999


Q ss_pred             cCCcCCC---------------CCCChhhhhccceeecccC
Q 023896          233 TDINFHA---------------GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       233 T~~~~~~---------------~~~~~~~~a~~~~~~~~~~  258 (275)
                      ++.....               ...++++.++.++.++..+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~  219 (253)
T 1xq6_A          179 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE  219 (253)
T ss_dssp             CSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             cCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCc
Confidence            8753211               1245666676666655543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.86  E-value=3.7e-21  Score=171.60  Aligned_cols=193  Identities=17%  Similarity=0.060  Sum_probs=139.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+.. +++..    ...+.++.+|+++.+++.+++++.    
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE----SNRYNFEHADICDSAEITRIFEQY----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc----CCCeEEEECCCCCHHHHHHHHhhc----
Confidence            5999999999999999999998 799999998752  11111 11111    123888999999999988888753    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-----CCeEEEEecCccccCCCcHHHHh
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-----SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                       ++|+|||+||....    ..+.+++++.+++|+.+++++++++.+.|...+     .++||++||.........+....
T Consensus        73 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~  147 (361)
T 1kew_A           73 -QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             -CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             -CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccc
Confidence             79999999997542    234567888999999999999999999875322     25999999965321110000000


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                      ...++                     ..+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.|.++..
T Consensus       148 ~~~~~---------------------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          148 NSVTL---------------------PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             TTSCC---------------------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTC
T ss_pred             ccccC---------------------CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCcEEEEeeceeECCCC
Confidence            00000                     012333444567899999999999999998886 89999999999998864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=6.6e-21  Score=168.60  Aligned_cols=197  Identities=18%  Similarity=0.073  Sum_probs=131.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ..++|++|||||+|+||++++++|+++|++|+++.|+........ .+........++.++.+|+++.+++.++++    
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            356899999999999999999999999999999999876433321 121111101137788999999998877764    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         .+|+|||+|+....     ...+..++.+++|+.+++++++++.+..   ..++||++||..+..+...........
T Consensus        77 ---~~d~Vih~A~~~~~-----~~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 ---GCTGVFHVATPMDF-----ESKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             ---TCSEEEECCCCCCS-----SCSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             ---CCCEEEEeccccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence               68999999985421     1223345789999999999999987642   246999999987554321000000000


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                      ++...+..                  ...  .++...|+.||.+.+.+++.++.++ +++++++.||.|.++..
T Consensus       146 ~~~~~~~~------------------~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~  198 (337)
T 2c29_D          146 CWSDMEFC------------------RAK--KMTAWMYFVSKTLAEQAAWKYAKEN-NIDFITIIPTLVVGPFI  198 (337)
T ss_dssp             CCCCHHHH------------------HHH--CCTTHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECEEESCCS
T ss_pred             cCCchhhh------------------ccc--CCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCC
Confidence            00000000                  000  0134579999999999998887653 89999999999998864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=1.4e-20  Score=167.05  Aligned_cols=183  Identities=17%  Similarity=0.077  Sum_probs=134.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH------HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR------GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +|++|||||+|+||++++++|+++|++|++++|+...      .....+++.....  ..+.++.+|+++.+++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC--CceEEEECCCCCHHHHHHHHHh
Confidence            5789999999999999999999999999999885432      1222223322111  1278889999999998887764


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      .     ++|+|||+||.....    .+.+++++.+++|+.++.++++++..    .+.++||++||.......       
T Consensus        80 ~-----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~-------  139 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNP-------  139 (348)
T ss_dssp             C-----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSC-------
T ss_pred             c-----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCC-------
Confidence            2     799999999975432    13456788999999999999997643    345799999996543211       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC-CchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                              ....+.+..+..+ ...|+.+|.+++.+++.++.+.+++++..+.|+.+..+
T Consensus       140 ------------------------~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          140 ------------------------QYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             ------------------------SSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECC
T ss_pred             ------------------------CCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCC
Confidence                                    0011223333223 67899999999999999988844599999999988765

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=2.1e-21  Score=161.76  Aligned_cols=179  Identities=13%  Similarity=0.167  Sum_probs=136.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~   86 (275)
                      ++|||||+|+||++++++|+++|++|++++|+..+.+..           ..+.++++|+++ .+++.++++       +
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHc-------C
Confidence            699999999999999999999999999999998653321           238899999999 877666654       7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||....            +.+++|+.++.++++++..    .+.++||++||..+..+.            ++
T Consensus        64 ~d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~------------~~  115 (219)
T 3dqp_A           64 MDAIINVSGSGGK------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPE------------KW  115 (219)
T ss_dssp             CSEEEECCCCTTS------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGG------------GC
T ss_pred             CCEEEECCcCCCC------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCC------------cc
Confidence            9999999997542            2688999999999998843    455799999997655321            00


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC--------
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH--------  238 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~--------  238 (275)
                      .+                       .++.+...|+.+|.+.+.+++    +..+++++.++||++.++....        
T Consensus       116 ~e-----------------------~~~~~~~~Y~~sK~~~e~~~~----~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~  168 (219)
T 3dqp_A          116 IG-----------------------AGFDALKDYYIAKHFADLYLT----KETNLDYTIIQPGALTEEEATGLIDINDEV  168 (219)
T ss_dssp             CS-----------------------HHHHHTHHHHHHHHHHHHHHH----HSCCCEEEEEEECSEECSCCCSEEEESSSC
T ss_pred             cc-----------------------cccccccHHHHHHHHHHHHHH----hccCCcEEEEeCceEecCCCCCccccCCCc
Confidence            00                       000225689999999999887    3469999999999998875321        


Q ss_pred             CCCCChhhhhccceeecccCC
Q 023896          239 AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ~~~~~~~~~a~~~~~~~~~~~  259 (275)
                      ....++++.++.++..+..+.
T Consensus       169 ~~~i~~~Dva~~i~~~l~~~~  189 (219)
T 3dqp_A          169 SASNTIGDVADTIKELVMTDH  189 (219)
T ss_dssp             CCCEEHHHHHHHHHHHHTCGG
T ss_pred             CCcccHHHHHHHHHHHHhCcc
Confidence            235688899988888776544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.85  E-value=1.2e-20  Score=167.65  Aligned_cols=186  Identities=16%  Similarity=0.049  Sum_probs=141.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCC--CCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD--PELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .+++|+||||||+|+||++++++|+++|++|++++|+..........+......  ...+.++.+|+++.+++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            356899999999999999999999999999999999766444444444432110  0138899999999988777765  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           ++|+|||+||.....    ...+++.+.+++|+.++.++++++..    .+.+++|++||.......        
T Consensus       100 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~--------  158 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDH--------  158 (351)
T ss_dssp             -----TCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTC--------
T ss_pred             -----CCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCC--------
Confidence                 799999999965432    24456778999999999999998865    344699999997544221        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                             ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.|..+.
T Consensus       159 -----------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~  209 (351)
T 3ruf_A          159 -----------------------PALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY-GFKTIGLRYFNVFGRR  209 (351)
T ss_dssp             -----------------------CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECSEESTT
T ss_pred             -----------------------CCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeeCceeCcC
Confidence                                   01123344444567899999999999999998875 8889999999997764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.85  E-value=1.8e-21  Score=166.87  Aligned_cols=201  Identities=17%  Similarity=0.064  Sum_probs=148.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |++|||||+|+||++++++|+++|++|++++|+..+..         .   ..+.++.+|+++.+++.++++       +
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~---~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------E---AHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------C---TTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------C---CCccEEEccCCCHHHHHHHHc-------C
Confidence            68999999999999999999999999999999875310         0   127788999999988877765       6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||..        ..+.+++.+++|+.++.++++++.+    .+.++||++||........             
T Consensus        64 ~d~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~-------------  118 (267)
T 3ay3_A           64 CDGIIHLGGVS--------VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYP-------------  118 (267)
T ss_dssp             CSEEEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSB-------------
T ss_pred             CCEEEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCC-------------
Confidence            99999999865        2345678999999999999999865    3457999999976543210             


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee-ecCCcCC--CCCCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV-KTDINFH--AGILS  243 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v-~T~~~~~--~~~~~  243 (275)
                                       ....+.+..+..+...|+.+|.+++.+++.++.+ .+++++.+.||++ .++....  ....+
T Consensus       119 -----------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrp~~v~~~~~~~~~~~~~~~  180 (267)
T 3ay3_A          119 -----------------RTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK-FDIETLNIRIGSCFPKPKDARMMATWLS  180 (267)
T ss_dssp             -----------------TTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT-TCCCEEEEEECBCSSSCCSHHHHHHBCC
T ss_pred             -----------------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH-cCCCEEEEeceeecCCCCCCCeeecccc
Confidence                             0011233344455689999999999999998765 4899999999998 4543211  12467


Q ss_pred             hhhhhccceeecccCCCCCcceEeccC
Q 023896          244 VEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       244 ~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +++.++.++..+..+. .....++..+
T Consensus       181 ~~dva~~~~~~~~~~~-~~~~~~~~~~  206 (267)
T 3ay3_A          181 VDDFMRLMKRAFVAPK-LGCTVVYGAS  206 (267)
T ss_dssp             HHHHHHHHHHHHHSSC-CCEEEEEECC
T ss_pred             HHHHHHHHHHHHhCCC-CCceeEecCC
Confidence            8888888777665443 2234444443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.85  E-value=5.9e-21  Score=159.57  Aligned_cols=199  Identities=15%  Similarity=0.058  Sum_probs=143.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|+||++++++|+++|++|++++|+..+....       .   ..+.++.+|+++.+++.++++       +
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~---~~~~~~~~Dl~d~~~~~~~~~-------~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------N---EHLKVKKADVSSLDEVCEVCK-------G   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------C---TTEEEECCCTTCHHHHHHHHT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------c---CceEEEEecCCCHHHHHHHhc-------C
Confidence            6899999999999999999999999999999998653211       1   238899999999999887775       6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||....          ..+.+++|+.++.++++++..    .+.+++|++||.....+..             
T Consensus        68 ~d~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~-------------  120 (227)
T 3dhn_A           68 ADAVISAFNPGWN----------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAP-------------  120 (227)
T ss_dssp             CSEEEECCCC----------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEET-------------
T ss_pred             CCEEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCC-------------
Confidence            8999999986421          112788899999999998755    3446999999976553320             


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC-------
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA-------  239 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~-------  239 (275)
                                         +...+..+..+...|+.+|.+.+.+++.++.+ .+++++.+.||++.++.....       
T Consensus       121 -------------------~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~v~g~~~~~~~~~~~~~  180 (227)
T 3dhn_A          121 -------------------GLRLMDSGEVPENILPGVKALGEFYLNFLMKE-KEIDWVFFSPAADMRPGVRTGRYRLGKD  180 (227)
T ss_dssp             -------------------TEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC-CSSEEEEEECCSEEESCCCCCCCEEESS
T ss_pred             -------------------CCccccCCcchHHHHHHHHHHHHHHHHHHhhc-cCccEEEEeCCcccCCCccccceeecCC
Confidence                               00011122245678999999999999988875 489999999999987653211       


Q ss_pred             ---------CCCChhhhhccceeecccCCCCCcceEeccC
Q 023896          240 ---------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       240 ---------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                               ...+.++.++.++..+..+. ..+.++.+.+
T Consensus       181 ~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-~~g~~~~~~~  219 (227)
T 3dhn_A          181 DMIVDIVGNSHISVEDYAAAMIDELEHPK-HHQERFTIGY  219 (227)
T ss_dssp             BCCCCTTSCCEEEHHHHHHHHHHHHHSCC-CCSEEEEEEC
T ss_pred             CcccCCCCCcEEeHHHHHHHHHHHHhCcc-ccCcEEEEEe
Confidence                     12467777887777766554 2333444433

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=7.6e-21  Score=169.97  Aligned_cols=178  Identities=15%  Similarity=0.005  Sum_probs=127.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHH--CCCEEEEEecChhHHHHHHHH------HHhcCCCCCceeEEEecccChHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLAS--KGITVVLTARDEKRGLEAVEK------LKASGVDPELLLFHQLDISDLASVS   74 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~--~g~~vi~~~r~~~~~~~~~~~------l~~~~~~~~~~~~~~~Dl~~~~~v~   74 (275)
                      ++++|+||||||+|+||++++++|++  .|++|++++|+..........      .....  ...+.++.+|+++.+++.
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI--GFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT--TCCSEEEECCTTCHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc--ccCceEEECCCCCHHHHH
Confidence            67889999999999999999999999  999999999976521111000      00111  123688999999999877


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      ++      ...++|+|||+||....      +.+.+++.+++|+.++.++++++..    .+ ++||++||....... +
T Consensus        85 ~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~V~~SS~~vyg~~-~  146 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----KK-AKVIYASSAGVYGNT-K  146 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGGCSC-C
T ss_pred             Hh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEeCcHHHhCCC-C
Confidence            76      23589999999995432      4567889999999999999999843    23 469999994433211 0


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                                     ..+.+..+..+...|+.+|.+.+.+++.++.+   +++..+.|+.+..|
T Consensus       147 -------------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~lR~~~v~Gp  192 (362)
T 3sxp_A          147 -------------------------------APNVVGKNESPENVYGFSKLCMDEFVLSHSND---NVQVGLRYFNVYGP  192 (362)
T ss_dssp             -------------------------------SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT---SCEEEEEECSEEST
T ss_pred             -------------------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc---CCEEEEEeCceeCc
Confidence                                           02333344456788999999999999998776   44555555555433

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=3.4e-20  Score=164.54  Aligned_cols=169  Identities=16%  Similarity=0.027  Sum_probs=131.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++.++|+||||||+|+||++++++|+++|++|++++|+...               ..+.++.+|+++.+++.++++   
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh---
Confidence            45578999999999999999999999999999999998754               127788999999998877765   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+|+....      +.+.+++.+++|+.++.++++++..    .+.++||++||........        
T Consensus        77 ----~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~--------  134 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENR--------  134 (347)
T ss_dssp             ----TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTS--------
T ss_pred             ----CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCC--------
Confidence                79999999987543      3345689999999999999999854    3456999999964332100        


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                                           .....+.+..+..+...|+.+|.+.+.+++.++.+. +++++.+.|+++.
T Consensus       135 ---------------------~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~  183 (347)
T 4id9_A          135 ---------------------PEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG-AMETVILRFSHTQ  183 (347)
T ss_dssp             ---------------------CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-SSEEEEEEECEEE
T ss_pred             ---------------------CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceEEEccceEe
Confidence                                 011123444555677899999999999999998885 8999999999998

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.84  E-value=1.6e-20  Score=166.27  Aligned_cols=180  Identities=16%  Similarity=0.096  Sum_probs=135.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC-------CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g-------~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~   75 (275)
                      .+++++||||||+|+||++++++|+++|       ++|++++|+..+...      .   ....+.++.+|+++.+++.+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~---~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G---FSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T---CCSEEEEEECCTTSTTHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c---cCCceeEEEcCCCCHHHHHH
Confidence            3578899999999999999999999999       899999998643211      0   11237888999999999887


Q ss_pred             HHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCc
Q 023896           76 LADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~  154 (275)
                      +++      +++|+|||+||....     .+.+++++.+++|+.++.++++++.+...+. +.++||++||.....+.. 
T Consensus        82 ~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-  149 (342)
T 2hrz_A           82 LVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL-  149 (342)
T ss_dssp             HHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC-
T ss_pred             HHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC-
Confidence            765      479999999986532     2456788999999999999999987743221 147999999976542210 


Q ss_pred             HHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeec--C
Q 023896          155 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVC--P  228 (275)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~--p  228 (275)
                                                    +..+.+..+..+...|+.+|.+.+.+++.++.++    ..+|++.|+  |
T Consensus       150 ------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~p  199 (342)
T 2hrz_A          150 ------------------------------PYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRP  199 (342)
T ss_dssp             ------------------------------CSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCC
T ss_pred             ------------------------------CCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecC
Confidence                                          0113333444567899999999999999998874    246777777  8


Q ss_pred             Ceeec
Q 023896          229 GFVKT  233 (275)
Q Consensus       229 G~v~T  233 (275)
                      |.+.+
T Consensus       200 g~~~~  204 (342)
T 2hrz_A          200 GKPNA  204 (342)
T ss_dssp             SSCCC
T ss_pred             CCCcc
Confidence            87654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.84  E-value=1.4e-20  Score=167.03  Aligned_cols=189  Identities=17%  Similarity=0.072  Sum_probs=134.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhH-HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++|||||+|+||++++++|+++  |++|++++|+... .....+++   ..  ..+.++.+|+++.+++.++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~---~~--~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI---LG--DRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG---CS--SSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh---cc--CCeEEEECCCCCHHHHHHHhh-----
Confidence            68999999999999999999999  8999999997531 11111111   11  238889999999988777765     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        .+|+|||+||....    ..+.+++++.+++|+.++.++++++.+.    + ++||++||...........       
T Consensus        75 --~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~-------  136 (348)
T 1oc2_A           75 --KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLRE-------  136 (348)
T ss_dssp             --TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGG-------
T ss_pred             --cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccc-------
Confidence              56999999997542    1244667889999999999999999874    3 4999999965332110000       


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                      +..            .........+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++..
T Consensus       137 ~~~------------~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          137 DLP------------GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             GST------------TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTC
T ss_pred             ccc------------ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeceeeCCCC
Confidence            000            0000000123344444567899999999999999998876 89999999999988764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.84  E-value=1.6e-20  Score=166.61  Aligned_cols=189  Identities=16%  Similarity=0.069  Sum_probs=133.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ||++++++||||||+|+||++++++|+++|  ++|+..+|......  .+.+..... ...+.++.+|+++.+++.++++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~   95 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQD-HPNYYFVKGEIQNGELLEHVIK   95 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTT-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhcc-CCCeEEEEcCCCCHHHHHHHHh
Confidence            566778999999999999999999999999  67877777642110  111111111 1238899999999999999887


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      ..     ++|+|||+|+.....    ...+.+++.+++|+.++.++++++...    +.+++|++||........     
T Consensus        96 ~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~-----  157 (346)
T 4egb_A           96 ER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLG-----  157 (346)
T ss_dssp             HH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCC-----
T ss_pred             hc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCC-----
Confidence            54     699999999976432    245667788999999999999988653    456899999965432210     


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                               ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++..
T Consensus       158 -------------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          158 -------------------------KTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY-QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             -------------------------SSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTC
T ss_pred             -------------------------cCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeecceeCcCC
Confidence                                     01123444555667899999999999999998875 89999999999988753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=1.5e-20  Score=165.00  Aligned_cols=194  Identities=19%  Similarity=0.147  Sum_probs=125.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEec-ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|++|||||+|+||++++++|+++|++|+++.| +....... ..+........++.++.+|+++.+++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            588999999999999999999999999999998 65321111 1111111001126788899999999887765      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       .+|+|||+|+...   .  ...+.+++.+++|+.+++++++++.+..   +.++||++||..+..+.....  ...++.
T Consensus        74 -~~d~vih~A~~~~---~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~--~~~~e~  142 (322)
T 2p4h_X           74 -GCVGIFHTASPID---F--AVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDK--DVLDES  142 (322)
T ss_dssp             -TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCC--SEECTT
T ss_pred             -CCCEEEEcCCccc---C--CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCC--eecCCc
Confidence             6899999996431   1  1112245689999999999999987642   347999999987553321000  000000


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                      .+....   ..             ...  .+....|+.||.+.+.+++.++.+ .+++++++.||+|.+++.
T Consensus       143 ~~~~~~---~~-------------~~~--~p~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrp~~v~g~~~  195 (322)
T 2p4h_X          143 DWSDVD---LL-------------RSV--KPFGWNYAVSKTLAEKAVLEFGEQ-NGIDVVTLILPFIVGRFV  195 (322)
T ss_dssp             CCCCHH---HH-------------HHH--CCTTHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECEEESCCC
T ss_pred             cccchh---hh-------------ccc--CcccccHHHHHHHHHHHHHHHHHh-cCCcEEEEcCCceECCCC
Confidence            000000   00             000  011226999999999998887765 489999999999999864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=5.6e-20  Score=162.55  Aligned_cols=180  Identities=17%  Similarity=0.085  Sum_probs=128.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+.....  ..+.++.+|+++.+++.++++..     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC--CcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            699999999999999999999999999998743221111222222111  12778899999999988877642     69


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+||......    ..+...+.+++|+.+++++++++..    .+.++||++||........              
T Consensus        75 D~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~--------------  132 (338)
T 1udb_A           75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNP--------------  132 (338)
T ss_dssp             SEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCC--------------
T ss_pred             CEEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCC--------------
Confidence            99999999654321    2345677899999999999987643    3457999999965432110              


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                       ...+.+..+. ++...|+.+|.+++.+++.++.+++++++..+.|+.+..
T Consensus       133 -----------------~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G  182 (338)
T 1udb_A          133 -----------------KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVG  182 (338)
T ss_dssp             -----------------SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEEC
T ss_pred             -----------------CCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecC
Confidence                             0011222222 336789999999999999999987788888888766643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=8.1e-20  Score=163.50  Aligned_cols=171  Identities=19%  Similarity=0.055  Sum_probs=121.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH-HHHHHHHhcC-CCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~-~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      |++|||||+|+||++++++|+++|++|++++|+..... ...+.+.... .....+.++.+|+++.+++.++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            68999999999999999999999999999999875421 1112221100 00123788899999999998888765    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+||.....    .+.+++++.+++|+.+++++++++.+...+ +.++||++||........           
T Consensus        78 -~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~-----------  140 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQ-----------  140 (372)
T ss_dssp             -CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCC-----------
T ss_pred             -CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCC-----------
Confidence             689999999975432    345677889999999999999999876532 237999999965432210           


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                                          ...+.+..+..+...|+.+|.+++.+++.++.++
T Consensus       141 --------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  174 (372)
T 1db3_A          141 --------------------EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY  174 (372)
T ss_dssp             --------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------------------CCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence                                0112333444557799999999999999998875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.83  E-value=1.7e-19  Score=158.77  Aligned_cols=175  Identities=14%  Similarity=0.102  Sum_probs=134.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|+||++++++|+++|++|++++|+.....   +.+   ..   .+.++.+|+++.+++.+++++     .+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~---~~~~~~~D~~~~~~~~~~~~~-----~~   67 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---TE---GAKFYNGDLRDKAFLRDVFTQ-----EN   67 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---CT---TSEEEECCTTCHHHHHHHHHH-----SC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---CC---CcEEEECCCCCHHHHHHHHhh-----cC
Confidence            47999999999999999999999999999998764321   111   11   277889999999998887764     37


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||.....    .+.+++++.+++|+.++.++++++..    .+.+++|++||.......              
T Consensus        68 ~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~--------------  125 (330)
T 2c20_A           68 IEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEV--------------  125 (330)
T ss_dssp             EEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSC--------------
T ss_pred             CCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCC--------------
Confidence            99999999875432    14567788999999999999998753    345799999996543211              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                       ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+..+.
T Consensus       126 -----------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          126 -----------------DVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS-NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             -----------------SSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS-SCEEEEEECSEEECCC
T ss_pred             -----------------CCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEecCcccCCC
Confidence                             01113334444567899999999999999998886 8999999999998764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.83  E-value=2.6e-20  Score=162.94  Aligned_cols=177  Identities=20%  Similarity=0.163  Sum_probs=132.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++++|.......   .+   .   ..+.++.+|+++.+++.+++++.     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~---~~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---P---KGVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---C---TTCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---c---cCeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999999999985432110   01   1   12667889999999988887643     68


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+++|+|+.....    .+.+++.+.+++|+.+++++++++..    .+.++||++||..+..+...             
T Consensus        68 d~vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~-------------  126 (311)
T 2p5y_A           68 THVSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVP-------------  126 (311)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCC-------------
T ss_pred             CEEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCC-------------
Confidence            9999999865321    24567788999999999999998854    34579999999622221100             


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                      ....+.+..+..+...|+.+|.+++.+++.++.++ +++++.+.||.+.++..
T Consensus       127 ----------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          127 ----------------EGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY-GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             ----------------TTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTC
T ss_pred             ----------------CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEEEEeeccccCcCC
Confidence                            00012223333456789999999999999998875 89999999999998764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.83  E-value=1.3e-20  Score=164.71  Aligned_cols=172  Identities=18%  Similarity=0.034  Sum_probs=132.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++||||||+|+||++++++|+++|++|++++|+........         ...+.++.+|+++.+ +.++++       .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~-------~   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK-------G   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC-------C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC-------C
Confidence            47999999999999999999999999999999775422211         122788899999987 554433       3


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                       |+|||+|+....    ..+.+++...+++|+.+++++++++..    .+.++||++||.......              
T Consensus        64 -d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~--------------  120 (312)
T 3ko8_A           64 -DVVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDA--------------  120 (312)
T ss_dssp             -SEEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSC--------------
T ss_pred             -CEEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCC--------------
Confidence             999999985432    235667889999999999999999854    245699999996544221              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                       ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++..
T Consensus       121 -----------------~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          121 -----------------DVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF-GVRCLAVRYANVVGPRL  172 (312)
T ss_dssp             -----------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTC
T ss_pred             -----------------CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCEEEEeeccccCcCC
Confidence                             01113334445667899999999999999999886 99999999999998853

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.83  E-value=2.5e-20  Score=164.65  Aligned_cols=173  Identities=14%  Similarity=0.111  Sum_probs=126.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++++++|||||+|+||++++++|+++|++|++++|+........+.+       ..+.++.+|+++.+++.++++++ 
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-------AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-------TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-------CCceEEEeeCCCHHHHHHHHhhc-
Confidence            3567899999999999999999999999999999999764322111111       13788999999999998888765 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+||.....     +.++++  +++|+.+++++++++..    .+.++||++||..........      
T Consensus        88 ----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~------  146 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATV------  146 (330)
T ss_dssp             ----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSS------
T ss_pred             ----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccC------
Confidence                799999999975432     334555  99999999999999874    245799999997654221000      


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeE-EEeecCCe
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC-VNCVCPGF  230 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~-vn~v~pG~  230 (275)
                                             +..+.+..  .+...|+.+|.+++.+++.+  ++  ..+| ++.+.||.
T Consensus       147 -----------------------~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          147 -----------------------PIPIDSPT--APFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL  191 (330)
T ss_dssp             -----------------------SBCTTCCC--CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC
T ss_pred             -----------------------CCCcCCCC--CCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC
Confidence                                   00011111  24578999999999999887  43  3567 67788875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=9.9e-20  Score=163.40  Aligned_cols=181  Identities=15%  Similarity=0.008  Sum_probs=129.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++|||||+|+||++++++|+++|++|++++|+...     ++...+.+....  ...+.++.+|+++.+++.++++.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI--EGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcccc--CCCceEEEccCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999997643     111111110000  123788899999999998888765 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+...+ +.++||++||........        
T Consensus       102 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~--------  164 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQ--------  164 (375)
T ss_dssp             ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCS--------
T ss_pred             ----CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCC--------
Confidence                689999999975432    245678889999999999999999876431 237999999976543210        


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV  231 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v  231 (275)
                                             ...+.+..+..+...|+.+|.+++.+++.++.++ ++.+..+.|+.+
T Consensus       165 -----------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~~  210 (375)
T 1t2a_A          165 -----------------------EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNH  210 (375)
T ss_dssp             -----------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCE
T ss_pred             -----------------------CCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEecccc
Confidence                                   0112333344456789999999999999998875 555555554443

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=6.3e-20  Score=162.30  Aligned_cols=172  Identities=16%  Similarity=0.102  Sum_probs=125.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|+||++++++|+++|++|++++|+..+.+.    +..     ..+.++.+|+++.+++.++++       +
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~-----~~~~~~~~Dl~d~~~~~~~~~-------~   77 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY-----LEPECRVAEMLDHAGLERALR-------G   77 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG-----GCCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc-----CCeEEEEecCCCHHHHHHHHc-------C
Confidence            479999999999999999999999999999998765322    111     127788999999988777664       6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||...      ...+++++.+++|+.++.++++++.+.    +.+++|++||..........           
T Consensus        78 ~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~-----------  136 (342)
T 2x4g_A           78 LDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQG-----------  136 (342)
T ss_dssp             CSEEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTS-----------
T ss_pred             CCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCC-----------
Confidence            999999998643      134577889999999999999999763    34799999997654322000           


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCC----CchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPH----SSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                         ....+..+..+    ...|+.+|.+.+.+++.++..  +++++.+.||++.++..
T Consensus       137 -------------------~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          137 -------------------LPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN--GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             -------------------SCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEECSCC
T ss_pred             -------------------CCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhc--CCcEEEEeCCceECCCC
Confidence                               00112233333    678999999999999999875  89999999999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.82  E-value=7e-20  Score=167.40  Aligned_cols=186  Identities=15%  Similarity=0.061  Sum_probs=130.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH---HHHHHHHHHhcCC------CCCceeEEEecccChHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR---GLEAVEKLKASGV------DPELLLFHQLDISDLAS   72 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~---~~~~~~~l~~~~~------~~~~~~~~~~Dl~~~~~   72 (275)
                      ....+|+||||||+|+||++++++|++.|++|++++|+...   .+...+.+.....      ...++.++.+|+++.++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            34457899999999999999999999999999999998873   3333333322110      01238899999999887


Q ss_pred             HHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           73 VSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      +.        .++++|+|||+||...       ..+.+++.+++|+.++.++++++.+     +..++|++||...  +.
T Consensus       145 l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~--G~  202 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV--GT  202 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG--GS
T ss_pred             CC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh--CC
Confidence            66        4579999999999753       2356788999999999999999876     3469999999775  21


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCC---CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCC
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW---CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPG  229 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG  229 (275)
                      ...                         .......+.+..+   ..+...|+.+|.+.+.+++.++.  .+++++.+.||
T Consensus       203 ~~~-------------------------~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~g~~~~ivRpg  255 (427)
T 4f6c_A          203 YFD-------------------------IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN--NGLDGRIVRVG  255 (427)
T ss_dssp             EEC-------------------------SSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH--TTCCEEEEEEC
T ss_pred             Ccc-------------------------CCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH--cCCCEEEEeCC
Confidence            000                         0000111222222   24678999999999999999765  58999999999


Q ss_pred             eeecCCc
Q 023896          230 FVKTDIN  236 (275)
Q Consensus       230 ~v~T~~~  236 (275)
                      +|.++..
T Consensus       256 ~v~G~~~  262 (427)
T 4f6c_A          256 NLTSPYN  262 (427)
T ss_dssp             CEESCSS
T ss_pred             eeecCCC
Confidence            9987754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.82  E-value=1.3e-19  Score=163.16  Aligned_cols=181  Identities=12%  Similarity=-0.000  Sum_probs=133.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.+++|||||+|+||++++++|+++|++|++++|+..+....    .     ...+.++.+|+++.+++.++++      
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D-----MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G-----GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c-----cCCceEEECCCCCHHHHHHHhC------
Confidence            468999999999999999999999999999999987542110    0     1127788999999998877764      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+|+......   .+.+++++.+++|+.++.++++++..    .+.++||++||..........     ..+.
T Consensus        93 -~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~-----~~~~  159 (379)
T 2c5a_A           93 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQL-----ETTN  159 (379)
T ss_dssp             -TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSS-----SSSS
T ss_pred             -CCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCC-----CccC
Confidence             7999999998754321   12456888999999999999999864    344699999996543211000     0000


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcC--CCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRG--WCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                           ..+.+..  +..+...|+.+|.+.+.+++.++.++ +++++.+.||++.++.
T Consensus       160 ---------------------~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~G~~  210 (379)
T 2c5a_A          160 ---------------------VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPF  210 (379)
T ss_dssp             ---------------------CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTT
T ss_pred             ---------------------CCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH-CCCEEEEEeCceeCcC
Confidence                                 0011111  22456789999999999999998775 8999999999998875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=1.8e-19  Score=159.03  Aligned_cols=181  Identities=14%  Similarity=-0.001  Sum_probs=131.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH-HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++||||||+|+||++++++|+++|++|++++|+..... ...+.+.    ....+.++.+|+++.+++.++++..   
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCCCHHHHHHHHHHc---
Confidence            4689999999999999999999999999999999865321 1111111    1123788899999999998888765   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                        ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+.    + .+++|++||.....+..         
T Consensus        86 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~---------  146 (335)
T 1rpn_A           86 --QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQ---------  146 (335)
T ss_dssp             --CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCS---------
T ss_pred             --CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCC---------
Confidence              689999999865421    234567889999999999999998653    3 26999999965432210         


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                            ...+.+..+..+...|+.+|.+.+.+++.++.++ ++.+..+.|+.+..+
T Consensus       147 ----------------------~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          147 ----------------------AERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGILFNHESP  195 (335)
T ss_dssp             ----------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECT
T ss_pred             ----------------------CCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc-CCcEEEEeeCcccCC
Confidence                                  0112333444556789999999999999998775 566666776666543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.82  E-value=9.6e-20  Score=163.22  Aligned_cols=178  Identities=13%  Similarity=0.029  Sum_probs=133.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc-ChHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLAD   78 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~   78 (275)
                      |.+|+.++||||||+|+||++++++|+++ |++|++++|+..+.....+        ...+.++.+|++ +.+.+.++++
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--------HERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--------STTEEEEECCTTTCHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--------CCCeEEEeCccCCCHHHHHHHhc
Confidence            45677899999999999999999999998 9999999998765333211        123889999999 8888887776


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                             ++|+|||+|+......    ..++..+.+++|+.++.++++++...    + .++|++||........     
T Consensus        91 -------~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~-----  149 (372)
T 3slg_A           91 -------KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCA-----  149 (372)
T ss_dssp             -------HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCC-----
T ss_pred             -------cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCC-----
Confidence                   6899999998765321    34556788999999999999988653    4 6999999954332110     


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCC-------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV  231 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v  231 (275)
                                                ...+.+..++       .+...|+.+|.+.+.+++.++.+  +++++.+.|+.+
T Consensus       150 --------------------------~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~--g~~~~ilRp~~v  201 (372)
T 3slg_A          150 --------------------------DEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME--GLNFTLFRPFNW  201 (372)
T ss_dssp             --------------------------CSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT--TCEEEEEEECSE
T ss_pred             --------------------------CCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC--CCCEEEEccccc
Confidence                                      0011111111       34568999999999999999887  999999999999


Q ss_pred             ecCC
Q 023896          232 KTDI  235 (275)
Q Consensus       232 ~T~~  235 (275)
                      ..+.
T Consensus       202 ~G~~  205 (372)
T 3slg_A          202 IGPG  205 (372)
T ss_dssp             ECSS
T ss_pred             cCCC
Confidence            7765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.82  E-value=5.4e-20  Score=155.10  Aligned_cols=191  Identities=16%  Similarity=0.088  Sum_probs=126.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..|++|||||+|+||++++++|+++| ++|++++|+..++...       .  ...+.++++|+++.+++.++++     
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~--~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------Y--PTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------C--CTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------c--cCCcEEEEecCCCHHHHHHHhc-----
Confidence            35789999999999999999999999 8999999998653321       1  1238899999999999888775     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+||||+|....                      ....+.+++.|++.+.++||++||.....+.....       
T Consensus        88 --~~D~vv~~a~~~~~----------------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~-------  136 (236)
T 3qvo_A           88 --GQDIVYANLTGEDL----------------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF-------  136 (236)
T ss_dssp             --TCSEEEEECCSTTH----------------------HHHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred             --CCCEEEEcCCCCch----------------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCccc-------
Confidence              68999999985211                      12355777778777778999999977643220000       


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC----
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA----  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~----  239 (275)
                                            ....+.........|..+|..+         +..+++++.|+||++.|+.....    
T Consensus       137 ----------------------~~~~~~~~~~~~~~~~~~~~~l---------~~~gi~~~~vrPg~i~~~~~~~~~~~~  185 (236)
T 3qvo_A          137 ----------------------VEWNNAVIGEPLKPFRRAADAI---------EASGLEYTILRPAWLTDEDIIDYELTS  185 (236)
T ss_dssp             ------------------------------CGGGHHHHHHHHHH---------HTSCSEEEEEEECEEECCSCCCCEEEC
T ss_pred             ----------------------ccchhhcccchHHHHHHHHHHH---------HHCCCCEEEEeCCcccCCCCcceEEec
Confidence                                  0000001112233454444332         13589999999999988753211    


Q ss_pred             -------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 -------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 -------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                             ...++++.++.++.++..+....+..+.+.++
T Consensus       186 ~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          186 RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             TTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             cCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence                   12578889998888887766445555544443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.81  E-value=7.3e-20  Score=160.25  Aligned_cols=171  Identities=17%  Similarity=0.039  Sum_probs=128.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+||||||+|+||++++++|+++|+.|++..|+....+..          ...+.++.+|+++ +++.++++       +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~Dl~~-~~~~~~~~-------~   63 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV----------NEAARLVKADLAA-DDIKDYLK-------G   63 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS----------CTTEEEECCCTTT-SCCHHHHT-------T
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc----------CCCcEEEECcCCh-HHHHHHhc-------C
Confidence            4799999999999999999999996555555554322111          1227889999998 77776664       7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|++||+|+....    ..+.+++++.+++|+.+++++++++..    .+.+++|++||.......              
T Consensus        64 ~d~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~--------------  121 (313)
T 3ehe_A           64 AEEVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEA--------------  121 (313)
T ss_dssp             CSEEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSC--------------
T ss_pred             CCEEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcC--------------
Confidence            9999999985432    235677889999999999999998654    345799999996544221              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                       ....+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.|+.+.++.
T Consensus       122 -----------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          122 -----------------KVIPTPEDYPTHPISLYGASKLACEALIESYCHTF-DMQAWIYRFANVIGRR  172 (313)
T ss_dssp             -----------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEEEECSCEESTT
T ss_pred             -----------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccccCcC
Confidence                             01112333444667889999999999999999986 8999999999998764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=8.8e-20  Score=164.08  Aligned_cols=180  Identities=16%  Similarity=0.063  Sum_probs=132.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.......   +.    ....+.++.+|+++.+++.++++   
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~----~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP----DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC----CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc----CCCceEEEECCCCCHHHHHHHhh---
Confidence            3567899999999999999999999999 9999999986532111   11    01238889999999887666554   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          ++|+|||+||.....    .+.+++++.+++|+.++.++++++..    . +.+++|++||....... .      
T Consensus        99 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~-~------  159 (377)
T 2q1s_A           99 ----EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEK-T------  159 (377)
T ss_dssp             ----CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------
T ss_pred             ----CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCC-C------
Confidence                799999999865432    24456788999999999999998853    3 34699999996533111 0      


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhh--hcC---CC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIA--NRG---WC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                              ...+.  +..   +. .+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++
T Consensus       160 ------------------------~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~G~  214 (377)
T 2q1s_A          160 ------------------------FDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-QLPTVRARFQNVYGP  214 (377)
T ss_dssp             -------------------------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECT
T ss_pred             ------------------------CCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECC
Confidence                                    00112  222   22 456789999999999999998775 899999999999876


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      ..
T Consensus       215 ~~  216 (377)
T 2q1s_A          215 GE  216 (377)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.81  E-value=7.4e-20  Score=163.16  Aligned_cols=180  Identities=15%  Similarity=0.057  Sum_probs=129.8

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |+.+++++||||||+|+||++++++|+++| ++|++++|+.....     +.... .   +. +.+|+++.+.++++++.
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~-~---~~-~~~d~~~~~~~~~~~~~  110 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLV-D---LN-IADYMDKEDFLIQIMAG  110 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGTT-T---SC-CSEEEEHHHHHHHHHTT
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhccc-C---ce-EeeecCcHHHHHHHHhh
Confidence            345677899999999999999999999999 89999999865421     11111 1   22 67899998887777653


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                        ..++++|+|||+||....      +.+++++.+++|+.++.++++++.+.    +. ++|++||.........     
T Consensus       111 --~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~-----  172 (357)
T 2x6t_A          111 --EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTS-----  172 (357)
T ss_dssp             --CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSS-----
T ss_pred             --cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCC-----
Confidence              235689999999986543      33467889999999999999998762    34 9999999764322100     


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                ..+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.|.++.
T Consensus       173 --------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          173 --------------------------DFIESREYEKPLNVFGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             --------------------------CCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESSS
T ss_pred             --------------------------CCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEecCeEECCC
Confidence                                      001122222446789999999999999998875 8999999999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.81  E-value=2e-19  Score=158.98  Aligned_cols=178  Identities=21%  Similarity=0.116  Sum_probs=132.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---C---CEEEEEecChhHH-HHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASK---G---ITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~---g---~~vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++|||||+|+||++++++|+++   |   ++|++++|+.... ....+.+..    ...+.++.+|+++.+++.+++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA----DPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT----CTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc----CCCeEEEEcCCCCHHHHHHHh---
Confidence            6999999999999999999997   8   9999999864210 011111111    123888999999998877665   


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          .++|+|||+||.....    .+.+++++.+++|+.++.++++++.+.    +.++||++||........       
T Consensus        75 ----~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~-------  135 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSID-------  135 (337)
T ss_dssp             ----TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCS-------
T ss_pred             ----cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCC-------
Confidence                4899999999865421    244567789999999999999998774    346999999965432110       


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                              ...+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||++.++..
T Consensus       136 ------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          136 ------------------------SGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             ------------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTC
T ss_pred             ------------------------CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH-CCCEEEEEeeeeECCCC
Confidence                                    0112333344567899999999999999998875 88999999999988753

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.81  E-value=1.4e-19  Score=148.56  Aligned_cols=179  Identities=15%  Similarity=0.082  Sum_probs=129.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++++||||+|+||++++++|+++|++|++++|+..+...       ..  ...+.++.+|+++.+++.++++       
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~--~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EG--PRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SS--CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------cc--CCceEEEEecCCCHHHHHHHHc-------
Confidence            4789999999999999999999999999999999865321       10  1237889999999998777765       


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      .+|++||++|.....     .+      .++|+.++..+++++..    .+.+++|++||.......             
T Consensus        67 ~~d~vi~~a~~~~~~-----~~------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~-------------  118 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDL-----SP------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDP-------------  118 (206)
T ss_dssp             TCSEEEECCCCTTCC-----SC------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCT-------------
T ss_pred             CCCEEEECccCCCCC-----Cc------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCc-------------
Confidence            589999999865331     11      24788888888887754    245699999997543221             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCee-ecCCcCC------
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFV-KTDINFH------  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v-~T~~~~~------  238 (275)
                                               ...+.+...|+.+|.+++.+++.     .+++++.+.||++ .++....      
T Consensus       119 -------------------------~~~~~~~~~y~~~K~~~e~~~~~-----~~i~~~~lrp~~~~~~~~~~~~~~~~~  168 (206)
T 1hdo_A          119 -------------------------TKVPPRLQAVTDDHIRMHKVLRE-----SGLKYVAVMPPHIGDQPLTGAYTVTLD  168 (206)
T ss_dssp             -------------------------TCSCGGGHHHHHHHHHHHHHHHH-----TCSEEEEECCSEEECCCCCSCCEEESS
T ss_pred             -------------------------ccccccchhHHHHHHHHHHHHHh-----CCCCEEEEeCCcccCCCCCcceEeccc
Confidence                                     00001457899999999998853     5899999999999 3432211      


Q ss_pred             ----CCCCChhhhhccceeecccC
Q 023896          239 ----AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 ----~~~~~~~~~a~~~~~~~~~~  258 (275)
                          ....++++.++.++..+..+
T Consensus       169 ~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          169 GRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             SCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             CCCCCCccCHHHHHHHHHHHhcCc
Confidence                12346777777777766654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.81  E-value=4.2e-19  Score=159.65  Aligned_cols=181  Identities=19%  Similarity=0.086  Sum_probs=130.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+||||||+|+||++++++|+++|++|++++|+..+     ++.....+.....  ..+.++.+|+++.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNK--ALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccc--cceEEEECCCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999998653     1111111110011  03788899999999998888765 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                          ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+...+ .+.++||++||........       
T Consensus       106 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~-------  170 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-------  170 (381)
T ss_dssp             ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-------
T ss_pred             ----CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCC-------
Confidence                789999999975432    245678899999999999999999987643 2346999999965432210       


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCC-----CeEEEeecCCe
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-----KFCVNCVCPGF  230 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-----~i~vn~v~pG~  230 (275)
                                              . .+.+..+..+...|+.+|.+.+.+++.++.++.     ...++.+.||.
T Consensus       171 ------------------------~-~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~  220 (381)
T 1n7h_A          171 ------------------------P-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR  220 (381)
T ss_dssp             ------------------------S-SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             ------------------------C-CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCC
Confidence                                    0 123333445678999999999999999988751     12234556664

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=2.7e-19  Score=156.29  Aligned_cols=173  Identities=12%  Similarity=0.031  Sum_probs=132.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++++|||||+|+||++++++|+++  |++|++++|+....+     +..      .+.++.+|+++.+++.+++++.   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~------~~~~~~~D~~d~~~~~~~~~~~---   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN------SGPFEVVNALDFNQIEHLVEVH---   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH------SSCEEECCTTCHHHHHHHHHHT---
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC------CCceEEecCCCHHHHHHHHhhc---
Confidence            478999999999999999999999  899999999876521     111      1667899999999988887644   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+||.....     ..+++++.+++|+.++.++++++.+    .+.+++|++||.....+..+         
T Consensus        68 --~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~---------  127 (312)
T 2yy7_A           68 --KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTP---------  127 (312)
T ss_dssp             --TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSC---------
T ss_pred             --CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCC---------
Confidence              799999999865321     2356788899999999999998865    34469999999765432100         


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                           .....+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+..+
T Consensus       128 ---------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          128 ---------------------KENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY-GVDVRSIRYPGLISW  176 (312)
T ss_dssp             ---------------------SSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEECEEECEEECS
T ss_pred             ---------------------CCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc-CCcEEEEeCCeEecC
Confidence                                 0011222333456789999999999999988775 899999999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=6.4e-19  Score=170.60  Aligned_cols=191  Identities=17%  Similarity=0.113  Sum_probs=134.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|+||||||+|+||++++++|+++|++|++++|+........+.+.....  ..+.++.+|+++.+++.+++++. 
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--SCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC--CceEEEEcCCCCHHHHHHHHHhC-
Confidence            456789999999999999999999999999999999876432222222221111  12778899999999988877643 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+||......    ..+...+.+++|+.++.++++++..    .+.++||++||.........       
T Consensus        84 ----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~-------  144 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATR-------  144 (699)
T ss_dssp             ----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGG-------
T ss_pred             ----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCcc-------
Confidence                7999999999754322    1233457899999999999887654    34579999999654321100       


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~  234 (275)
                                       +   .....+.+..+..+...|+.+|.+++.+++.++.+. .++++..+.|+.+..+
T Consensus       145 -----------------~---~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          145 -----------------F---PNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             -----------------S---TTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             -----------------c---cccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence                             0   000012223333456789999999999999998886 6899999998887654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.80  E-value=1e-18  Score=145.03  Aligned_cols=185  Identities=14%  Similarity=0.122  Sum_probs=124.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++++|+..+.....          ..+.++.+|+++.++         +.+.++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------~~~~~~~~D~~d~~~---------~~~~~~   62 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----------KDINILQKDIFDLTL---------SDLSDQ   62 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----------SSSEEEECCGGGCCH---------HHHTTC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----------CCCeEEeccccChhh---------hhhcCC
Confidence            5999999999999999999999999999999987654321          128889999999887         223579


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+||....             ...+|+.++..+++    .+++.+.+++|++||..+..+.....           
T Consensus        63 d~vi~~ag~~~~-------------~~~~~~~~~~~l~~----a~~~~~~~~~v~~SS~~~~~~~~~~~-----------  114 (221)
T 3ew7_A           63 NVVVDAYGISPD-------------EAEKHVTSLDHLIS----VLNGTVSPRLLVVGGAASLQIDEDGN-----------  114 (221)
T ss_dssp             SEEEECCCSSTT-------------TTTSHHHHHHHHHH----HHCSCCSSEEEEECCCC--------------------
T ss_pred             CEEEECCcCCcc-------------ccchHHHHHHHHHH----HHHhcCCceEEEEecceEEEcCCCCc-----------
Confidence            999999997321             12345555555554    45556668999999987654421000           


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC---------
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH---------  238 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~---------  238 (275)
                                         ...+..+..+...|+.+|.+.+.+ ..+..+..+++++.|.||++.++....         
T Consensus       115 -------------------~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~  174 (221)
T 3ew7_A          115 -------------------TLLESKGLREAPYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDH  174 (221)
T ss_dssp             -----------------------------CCCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------
T ss_pred             -------------------cccccCCCCCHHHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccCceEecccc
Confidence                               000011112346799999999987 344432468999999999998762110         


Q ss_pred             -------CCCCChhhhhccceeecccCC
Q 023896          239 -------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 -------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                             ...+++++.++.++..+..+.
T Consensus       175 ~~~~~~~~~~i~~~Dva~~~~~~l~~~~  202 (221)
T 3ew7_A          175 LLFGSDGNSFISMEDYAIAVLDEIERPN  202 (221)
T ss_dssp             ---------CCCHHHHHHHHHHHHHSCS
T ss_pred             ceecCCCCceEeHHHHHHHHHHHHhCcc
Confidence                   124678888888888777665

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.80  E-value=1.8e-19  Score=157.81  Aligned_cols=164  Identities=12%  Similarity=0.040  Sum_probs=101.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +|++|||||+|+||++++++|+++|++|++++|+...             .   - ++.+|+++.+++.++++..     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~---~-~~~~Dl~d~~~~~~~~~~~-----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------P---K-FEQVNLLDSNAVHHIIHDF-----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHH-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------C---C-eEEecCCCHHHHHHHHHhh-----
Confidence            5789999999999999999999999999999987543             0   0 5678999999988888755     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+.    + +++|++||.....+.             
T Consensus        60 ~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~-------------  117 (315)
T 2ydy_A           60 QPHVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGT-------------  117 (315)
T ss_dssp             CCSEEEECC-----------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSS-------------
T ss_pred             CCCEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCC-------------
Confidence            699999999865432    245678899999999999999998762    3 499999997654321             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                         ...+.+..+..+...|+.+|.+.+.+++.++.++..+|++.|. |+..+
T Consensus       118 -------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          118 -------------------NPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILY-GEVEK  165 (315)
T ss_dssp             -------------------SCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEE-CSCSS
T ss_pred             -------------------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeee-CCCCc
Confidence                               0112333344557799999999999999987665566777766 55544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.80  E-value=3.9e-20  Score=163.59  Aligned_cols=184  Identities=18%  Similarity=0.177  Sum_probs=125.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH--HHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE--AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +|++|||||+|+||++++++|+++|++|+++.|+..+...  ....+.. .   ..+.++++|+++.+++.++++     
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE-L---GDLKIFRADLTDELSFEAPIA-----   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG-G---SCEEEEECCTTTSSSSHHHHT-----
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC-C---CcEEEEecCCCChHHHHHHHc-----
Confidence            5789999999999999999999999999999998653221  1122321 1   127788999999988777664     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        ++|+|||+|+.....     ..+..++.+++|+.|++++++++.+..   +.++||++||..+..+.  +        
T Consensus        80 --~~D~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~--~--------  139 (338)
T 2rh8_A           80 --GCDFVFHVATPVHFA-----SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTIN--Q--------  139 (338)
T ss_dssp             --TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHH--H--------
T ss_pred             --CCCEEEEeCCccCCC-----CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecC--C--------
Confidence              689999999854221     112234589999999999999987642   24699999996643210  0        


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCC---------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWC---------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                     ....  ...+.|..+.         +....|+.||.+.+.+++.++.+ .+++++++.||.|.++
T Consensus       140 ---------------~~~~--~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~gi~~~~lrp~~v~Gp  201 (338)
T 2rh8_A          140 ---------------LDGT--GLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE-NNIDLITVIPTLMAGS  201 (338)
T ss_dssp             ---------------HTCS--CCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH-HTCCEEEEEECEEESC
T ss_pred             ---------------cCCC--CcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCceECC
Confidence                           0000  0001111110         11236999999999999888765 3899999999999998


Q ss_pred             Cc
Q 023896          235 IN  236 (275)
Q Consensus       235 ~~  236 (275)
                      ..
T Consensus       202 ~~  203 (338)
T 2rh8_A          202 SL  203 (338)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=7.1e-20  Score=151.48  Aligned_cols=150  Identities=11%  Similarity=-0.005  Sum_probs=120.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++++|||||+|+||++++++|+++|+  +|++++|+..+          .   ...+.++.+|+++.+++.+++     
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~---~~~~~~~~~D~~~~~~~~~~~-----   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E---HPRLDNPVGPLAELLPQLDGS-----   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C---CTTEECCBSCHHHHGGGCCSC-----
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c---CCCceEEeccccCHHHHHHhh-----
Confidence            478999999999999999999999998  99999998764          0   112778889999887654433     


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                          +|++||++|....      ..+++++.+++|+.++..+++++.+    .+.+++|++||.....            
T Consensus        66 ----~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~------------  119 (215)
T 2a35_A           66 ----IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA------------  119 (215)
T ss_dssp             ----CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT------------
T ss_pred             ----hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC------------
Confidence                8999999986432      2456788899999999999998765    3456999999965432            


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeE-EEeecCCeeecCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC-VNCVCPGFVKTDI  235 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~-vn~v~pG~v~T~~  235 (275)
                                                      ++...|+.+|.+++.+++.+     +++ ++.+.||++.++.
T Consensus       120 --------------------------------~~~~~y~~sK~~~e~~~~~~-----~~~~~~~vrp~~v~g~~  156 (215)
T 2a35_A          120 --------------------------------KSSIFYNRVKGELEQALQEQ-----GWPQLTIARPSLLFGPR  156 (215)
T ss_dssp             --------------------------------TCSSHHHHHHHHHHHHHTTS-----CCSEEEEEECCSEESTT
T ss_pred             --------------------------------CCccHHHHHHHHHHHHHHHc-----CCCeEEEEeCceeeCCC
Confidence                                            23468999999999988753     788 9999999998875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.80  E-value=4e-19  Score=157.08  Aligned_cols=169  Identities=20%  Similarity=0.114  Sum_probs=119.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++++++|||||+|+||++++++|+++|++|++++|+.......   +...    ..+.++.+|+++.+++.++++..  
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~----~~~~~~~~Dl~d~~~~~~~~~~~--   88 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH----PNLTFVEGSIADHALVNQLIGDL--   88 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC----TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc----CCceEEEEeCCCHHHHHHHHhcc--
Confidence            45678999999999999999999999999999999986431111   1110    13788999999999988887742  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc----CCCcHHHH
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL----KDLPEKAR  158 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~----~~~~~~~~  158 (275)
                         ++|+|||+||.....     +.++++  +++|+.++.++++++.+    .+.++||++||.....    ...     
T Consensus        89 ---~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~-----  149 (333)
T 2q1w_A           89 ---QPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQP-----  149 (333)
T ss_dssp             ---CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSS-----
T ss_pred             ---CCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCC-----
Confidence               699999999975432     223444  99999999999999876    3457999999965432    100     


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHH-HHHhCCCeEEEeecCCeeec
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI-LAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~-~a~~~~~i~vn~v~pG~v~T  233 (275)
                                                 ..+.+.. .+....|+.+|.+.+.+++. ++      .+..+.|+.+..
T Consensus       150 ---------------------------~~~~E~~-~p~~~~Y~~sK~~~E~~~~~s~~------~~~ilR~~~v~g  191 (333)
T 2q1w_A          150 ---------------------------VRLDHPR-NPANSSYAISKSANEDYLEYSGL------DFVTFRLANVVG  191 (333)
T ss_dssp             ---------------------------BCTTSCC-CCTTCHHHHHHHHHHHHHHHHTC------CEEEEEESEEES
T ss_pred             ---------------------------CCcCCCC-CCCCCchHHHHHHHHHHHHhhhC------CeEEEeeceEEC
Confidence                                       0011111 12227899999999999988 65      344555555443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.79  E-value=8.3e-19  Score=146.05  Aligned_cols=188  Identities=12%  Similarity=-0.012  Sum_probs=129.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+++|++|++++|+..+....    ..     ..+.++.+|+++.++         +.+.++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~-----~~~~~~~~D~~d~~~---------~~~~~~   63 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----LG-----ATVATLVKEPLVLTE---------ADLDSV   63 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----TC-----TTSEEEECCGGGCCH---------HHHTTC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----cC-----CCceEEecccccccH---------hhcccC
Confidence            599999999999999999999999999999998765432    11     128889999999987         223579


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+||.....       +    ...+|+.++.+++++    +++.+ +++|++||..+..+......          
T Consensus        64 d~vi~~ag~~~~~-------~----~~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~----------  117 (224)
T 3h2s_A           64 DAVVDALSVPWGS-------G----RGYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHP----------  117 (224)
T ss_dssp             SEEEECCCCCTTS-------S----CTHHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSC----------
T ss_pred             CEEEECCccCCCc-------c----hhhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCcc----------
Confidence            9999999976211       0    135577777665555    45556 89999999766543211000          


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC---------
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH---------  238 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~---------  238 (275)
                                        ....+...+.+...|+.+|.+.+.+ +.+.. ..+++++.+.||++.++....         
T Consensus       118 ------------------~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~-~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~  177 (224)
T 3h2s_A          118 ------------------MILDFPESAASQPWYDGALYQYYEY-QFLQM-NANVNWIGISPSEAFPSGPATSYVAGKDTL  177 (224)
T ss_dssp             ------------------GGGGCCGGGGGSTTHHHHHHHHHHH-HHHTT-CTTSCEEEEEECSBCCCCCCCCEEEESSBC
T ss_pred             ------------------ccccCCCCCccchhhHHHHHHHHHH-HHHHh-cCCCcEEEEcCccccCCCcccCceeccccc
Confidence                              0011111112256799999999955 22322 258999999999998762110         


Q ss_pred             ------CCCCChhhhhccceeecccCC
Q 023896          239 ------AGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       239 ------~~~~~~~~~a~~~~~~~~~~~  259 (275)
                            ....++++.++.++..+..+.
T Consensus       178 ~~~~~~~~~i~~~DvA~~~~~~l~~~~  204 (224)
T 3h2s_A          178 LVGEDGQSHITTGNMALAILDQLEHPT  204 (224)
T ss_dssp             CCCTTSCCBCCHHHHHHHHHHHHHSCC
T ss_pred             ccCCCCCceEeHHHHHHHHHHHhcCcc
Confidence                  124678888888888777655

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.78  E-value=3.4e-18  Score=149.55  Aligned_cols=166  Identities=14%  Similarity=0.104  Sum_probs=128.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|+||++++++|+++|++|++++|+.....  .+          .+.++.+|++ .+++.++++       +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~----------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN----------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC----------ceEEEEcccc-HHHHHHhhc-------C
Confidence            68999999999999999999999999999999943322  11          2888999999 888776664       7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+|+.....        ...+.+++|+.++.++++++..    .+.+++|++||.......              
T Consensus        63 ~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~--------------  116 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDE--------------  116 (311)
T ss_dssp             CSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCG--------------
T ss_pred             CCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCC--------------
Confidence            99999999875432        4456789999999999998854    345689999995443211              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                       ....+.+..+..+...|+.+|.+.+.+++.++.+. +++++.+.||.+..+..
T Consensus       117 -----------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          117 -----------------TSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK-GLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             -----------------GGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS-CCEEEEEEECEEECSCC
T ss_pred             -----------------CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCceeCcCC
Confidence                             01123344455667899999999999999998874 89999999999987643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.77  E-value=2.5e-18  Score=152.07  Aligned_cols=173  Identities=12%  Similarity=-0.043  Sum_probs=127.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   84 (275)
                      +++|||||+|+||++++++|+++ |++|++++|+..+.+...    .    ...+.++.+|+++. +.+.++++      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N----HPHFHFVEGDISIHSEWIEYHVK------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T----CTTEEEEECCTTTCSHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----c----CCCeEEEeccccCcHHHHHhhcc------
Confidence            47999999999999999999998 899999999876533211    1    12388899999984 55666654      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+||......    ..+++++.+++|+.++.++++++..    .+ +++|++||.........          
T Consensus        67 -~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~----------  126 (345)
T 2bll_A           67 -KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSD----------  126 (345)
T ss_dssp             -HCSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCC----------
T ss_pred             -CCCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCC----------
Confidence             5899999998754321    2346778899999999999998854    34 79999999654321100          


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCC-------CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWC-------PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                           ..+.+..+.       .+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++.
T Consensus       127 ---------------------~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~  182 (345)
T 2bll_A          127 ---------------------KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPR  182 (345)
T ss_dssp             ---------------------SSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSS
T ss_pred             ---------------------CCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc-CCCEEEEcCCcccCCC
Confidence                                 001111110       234589999999999999998775 8999999999997765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.77  E-value=2.3e-18  Score=159.72  Aligned_cols=190  Identities=15%  Similarity=0.083  Sum_probs=128.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC---CCEEEEEecChhHHHHHHHHHHhcCCC-------------CCceeEEEecc
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK---GITVVLTARDEKRGLEAVEKLKASGVD-------------PELLLFHQLDI   67 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~---g~~vi~~~r~~~~~~~~~~~l~~~~~~-------------~~~~~~~~~Dl   67 (275)
                      .++|+||||||+|+||++++++|+++   |++|++++|+....... +.+......             ..++.++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            46799999999999999999999999   99999999987654322 222221111             12388999999


Q ss_pred             cCh------HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEE
Q 023896           68 SDL------ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  141 (275)
Q Consensus        68 ~~~------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  141 (275)
                      ++.      +.+.++++       ++|+|||+||....        +.+++.+++|+.++.++++++..    .+.+++|
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~V  210 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TKLKPFT  210 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCEE
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeEE
Confidence            844      45555544       68999999997643        34567889999999999998864    3446999


Q ss_pred             EEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCe
Q 023896          142 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  221 (275)
Q Consensus       142 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i  221 (275)
                      ++||....... .+.   .+.......     ..      +     ............|+.+|.+.+.+++.++.+. ++
T Consensus       211 ~iSS~~v~~~~-~~~---~~~E~~~~~-----p~------~-----~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi  269 (478)
T 4dqv_A          211 YVSTADVGAAI-EPS---AFTEDADIR-----VI------S-----PTRTVDGGWAGGYGTSKWAGEVLLREANDLC-AL  269 (478)
T ss_dssp             EEEEGGGGTTS-CTT---TCCSSSCHH-----HH------C-----CEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CC
T ss_pred             EEeehhhcCcc-CCC---CcCCccccc-----cc------C-----cccccccccccchHHHHHHHHHHHHHHHHHh-CC
Confidence            99996532211 000   000000000     00      0     0000000223569999999999999998764 89


Q ss_pred             EEEeecCCeeecC
Q 023896          222 CVNCVCPGFVKTD  234 (275)
Q Consensus       222 ~vn~v~pG~v~T~  234 (275)
                      +++.+.||+|..+
T Consensus       270 ~~~ivRpg~v~G~  282 (478)
T 4dqv_A          270 PVAVFRCGMILAD  282 (478)
T ss_dssp             CEEEEEECEEECC
T ss_pred             CeEEEECceeeCC
Confidence            9999999999764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=2.8e-18  Score=148.21  Aligned_cols=188  Identities=15%  Similarity=0.110  Sum_probs=138.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++|||||+|+||++++++|+++|++|++++|.                        ++|+++.+++.+++++.     +
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~-----~   56 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEI-----R   56 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHH-----C
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhc-----C
Confidence            389999999999999999999999999999982                        27999999998888765     7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+|+.....    ...+.+++.+++|+.++.++++++...    + .++|++||.....+.              
T Consensus        57 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~--------------  113 (287)
T 3sc6_A           57 PHIIIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGD--------------  113 (287)
T ss_dssp             CSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCC--------------
T ss_pred             CCEEEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCC--------------
Confidence            99999999976532    234678889999999999999998653    3 489999997544221              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC--------
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH--------  238 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~--------  238 (275)
                                       ....+.+..+..+...|+.+|.+.+.+++.++.     +++.+.||.+..+....        
T Consensus       114 -----------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~ilR~~~v~G~~~~~~~~~~~~~  171 (287)
T 3sc6_A          114 -----------------RPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-----KYFIVRTSWLYGKYGNNFVKTMIRL  171 (287)
T ss_dssp             -----------------CSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-----SEEEEEECSEECSSSCCHHHHHHHH
T ss_pred             -----------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-----CcEEEeeeeecCCCCCcHHHHHHHH
Confidence                             011233444556678999999999999998754     35778888886653211        


Q ss_pred             --------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 --------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 --------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                    ......++.++.++.++..+.   .+.|.+.++
T Consensus       172 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  215 (287)
T 3sc6_A          172 GKEREEISVVADQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNT  215 (287)
T ss_dssp             HTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC---CEEEECCCB
T ss_pred             HHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC---CCeEEEcCC
Confidence                          012346777777766665443   455555443

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.76  E-value=3.9e-18  Score=149.28  Aligned_cols=166  Identities=17%  Similarity=0.130  Sum_probs=125.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++|||||+|+||++++++|+++  |++|++++|+.....              .+.++.+|+++.+++.+++++.     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~~~~~~~~~~-----   61 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRDEIDRAVEKY-----   61 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHHHHHHHHhhc-----
Confidence            4899999999999999999998  899999998764321              1567889999999988887642     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|||+|+.....     ..+++++.+++|+.++.++++++.+    .+.+++|++||.....+..+           
T Consensus        62 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~-----------  121 (317)
T 3ajr_A           62 SIDAIFHLAGILSAK-----GEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETP-----------  121 (317)
T ss_dssp             TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSC-----------
T ss_pred             CCcEEEECCcccCCc-----cccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCC-----------
Confidence            799999999864321     2356778899999999999998865    34569999999765432100           


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                                         .....+..+..+...|+.+|.+.+.+++.++.++ +++++.+.|+.+.
T Consensus       122 -------------------~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~~~  168 (317)
T 3ajr_A          122 -------------------KNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF-GLDVRSLRYPGII  168 (317)
T ss_dssp             -------------------SSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEE
T ss_pred             -------------------CCCccccccCCCCchHHHHHHHHHHHHHHHHHhc-CCeEEEEecCcEe
Confidence                               0001122333457899999999999999887764 8899999765554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.76  E-value=3.3e-18  Score=151.63  Aligned_cols=177  Identities=16%  Similarity=0.044  Sum_probs=125.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++++||||||+|+||++++++|+++|++|++++|+........+.+.  .  ...+.++.+|+.+..          
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--G--HENFELINHDVVEPL----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--T--CTTEEEEECCTTSCC----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--c--CCceEEEeCccCChh----------
Confidence            34567999999999999999999999999999999987532111111111  1  123788899998752          


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                        +.++|+|||+||......    ..+++++.+++|+.++.++++++...    + .++|++||....... .       
T Consensus        89 --~~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~-~-------  149 (343)
T 2b69_A           89 --YIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDP-E-------  149 (343)
T ss_dssp             --CCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSC-S-------
T ss_pred             --hcCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCC-C-------
Confidence              457999999998654321    12456788999999999999988652    3 499999996543211 0       


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhc-----CCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANR-----GWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                             ...+.+.     .+..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++.
T Consensus       150 -----------------------~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          150 -----------------------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVARIFNTFGPR  204 (343)
T ss_dssp             -----------------------SSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTT
T ss_pred             -----------------------CCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEEEcceeCcC
Confidence                                   0001111     222446789999999999999988774 8999999999998774

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.76  E-value=8.7e-18  Score=147.30  Aligned_cols=165  Identities=16%  Similarity=0.149  Sum_probs=125.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +++++|||||+|+||++++++|+++|++|++++|+.                       .+|+++.+++.+++++.    
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhc----
Confidence            357899999999999999999999999999988762                       26999999988887754    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+|+......   ...++.++.+++|+.++.++++++..    .+.+++|++||........           
T Consensus        55 -~~d~vih~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~-----------  115 (321)
T 1e6u_A           55 -RIDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLA-----------  115 (321)
T ss_dssp             -CCSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTC-----------
T ss_pred             -CCCEEEEcCeecCCcc---hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCC-----------
Confidence             7999999998654221   13445678899999999999998865    3446999999965432210           


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcC----CC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRG----WC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                          ...+.+..    +. +....|+.+|.+.+.+++.++.++ +++++.+.||++..+..
T Consensus       116 --------------------~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          116 --------------------KQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             --------------------CSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTC
T ss_pred             --------------------CCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCcCCcCC
Confidence                                00011111    11 223589999999999999998775 89999999999987653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.76  E-value=4.7e-18  Score=147.18  Aligned_cols=154  Identities=20%  Similarity=0.204  Sum_probs=118.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+++|||||+|+||++++++|+++|++|++++|+                        .+|+++.+++.++++..     
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhc-----
Confidence            5789999999999999999999999999999986                        26999999988888755     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|||+||....    ..+.+++++.+++|+.++.++++++.+.    + .++|++||.....+..            
T Consensus        63 ~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~------------  121 (292)
T 1vl0_A           63 KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEA------------  121 (292)
T ss_dssp             CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCC------------
T ss_pred             CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCC------------
Confidence            79999999986543    1245678899999999999999998762    3 3999999975443210            


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                         ...+.+..+..+...|+.+|.+.+.+++.++.+     +..+.|+.+..
T Consensus       122 -------------------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~lR~~~v~G  165 (292)
T 1vl0_A          122 -------------------KEPITEFDEVNPQSAYGKTKLEGENFVKALNPK-----YYIVRTAWLYG  165 (292)
T ss_dssp             -------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS-----EEEEEECSEES
T ss_pred             -------------------CCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC-----eEEEeeeeeeC
Confidence                               011233333445678999999999999988653     45555665553

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.75  E-value=8e-18  Score=146.60  Aligned_cols=173  Identities=16%  Similarity=0.067  Sum_probs=126.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+..       +. +.+|+++.+.+.++++..  .+++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~-------~~-~~~d~~~~~~~~~~~~~~--~~~~   68 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD-------LN-IADYMDKEDFLIQIMAGE--EFGD   68 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT-------SC-CSEEEEHHHHHHHHHTTC--CCSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc-------ce-eccccccHHHHHHHHhcc--ccCC
Confidence            48999999999999999999999 89999999765421  111211       22 678999888877665411  0236


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+|||+||....      ..+++++.+++|+.++.++++++.+.    +. ++|++||........             
T Consensus        69 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~-------------  124 (310)
T 1eq2_A           69 VEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRT-------------  124 (310)
T ss_dssp             CCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCC-------------
T ss_pred             CcEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCC-------------
Confidence            9999999986543      33467888999999999999998653    44 999999975432110             


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                        ...+.+..+..+...|+.+|.+.+.+++.++.++ +++++.+.||++.++.
T Consensus       125 ------------------~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v~G~~  174 (310)
T 1eq2_A          125 ------------------SDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPR  174 (310)
T ss_dssp             ------------------SCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESSS
T ss_pred             ------------------CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeCCcEECcC
Confidence                              0011122222446789999999999999998774 8999999999998765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.75  E-value=7.4e-18  Score=144.33  Aligned_cols=182  Identities=15%  Similarity=0.110  Sum_probs=132.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|++ |++|++++|+...        .    ..     +.+|+++.+++.++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~----~~-----~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q----GG-----YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T----TC-----EECCTTSHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C----CC-----ceeccCCHHHHHHHHHhc-----CC
Confidence            699999999999999999994 8999999998742        0    11     789999999998888765     69


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+||.....    .+.+++++.+++|+.++.++++++.+    .+ +++|++||.....+..              
T Consensus        59 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~--------------  115 (273)
T 2ggs_A           59 DVIINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEK--------------  115 (273)
T ss_dssp             SEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSS--------------
T ss_pred             CEEEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCC--------------
Confidence            9999999975432    24567889999999999999999865    23 5999999977653320              


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc--------C--
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN--------F--  237 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~--------~--  237 (275)
                                        +.+.+..+..+...|+.+|.+++.+++.  .++..+|++.|. |  .+++.        .  
T Consensus       116 ------------------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~  172 (273)
T 2ggs_A          116 ------------------GNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGK  172 (273)
T ss_dssp             ------------------CSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECCCB-S--SSSHHHHHHHHHHTTC
T ss_pred             ------------------CCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEeccccc-c--ccHHHHHHHHHHHcCC
Confidence                              0122333334567899999999999987  333456777766 4  22211        0  


Q ss_pred             -------CCCCCChhhhhccceeecccC
Q 023896          238 -------HAGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 -------~~~~~~~~~~a~~~~~~~~~~  258 (275)
                             ......+++.++.++.++..+
T Consensus       173 ~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          173 TVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             CEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             CEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence                   112456778787777666543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.74  E-value=1.4e-17  Score=160.33  Aligned_cols=176  Identities=11%  Similarity=-0.034  Sum_probs=130.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~   81 (275)
                      +++++||||||+|+||++++++|+++ |++|++++|+..+....    ..    ...+.++.+|+++.++ +.++++   
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~~----~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LN----HPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----TT----CTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----cc----CCceEEEECCCCCcHHHHHHhhc---
Confidence            46789999999999999999999998 89999999987643221    11    1238889999999765 555544   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          ++|+|||+||......    ..+++.+.+++|+.++.++++++..    .+ +++|++||.........       
T Consensus       382 ----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~-------  441 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSD-------  441 (660)
T ss_dssp             ----HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCS-------
T ss_pred             ----CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCC-------
Confidence                6899999998754321    2345678999999999999998865    34 79999999654322100       


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCC-------CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGW-------CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                              ..+.+..+       ..+...|+.+|.+.+.+++.++.++ +++++.+.||.+.++
T Consensus       442 ------------------------~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRpg~v~Gp  496 (660)
T 1z7e_A          442 ------------------------KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGP  496 (660)
T ss_dssp             ------------------------SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEEST
T ss_pred             ------------------------cccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-CCCEEEECCCcccCC
Confidence                                    00111111       1234589999999999999998775 899999999999876


Q ss_pred             C
Q 023896          235 I  235 (275)
Q Consensus       235 ~  235 (275)
                      .
T Consensus       497 ~  497 (660)
T 1z7e_A          497 R  497 (660)
T ss_dssp             T
T ss_pred             C
Confidence            5

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.73  E-value=2.4e-17  Score=143.12  Aligned_cols=157  Identities=12%  Similarity=0.004  Sum_probs=121.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||+|+||++++++|+ +|++|++++|+..                    .+.+|+++.+++.++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999 8999999999761                    2468999999988887754     69


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||+||.....    ...+++++.+++|+.++.++++++..    .+ .++|++||.....+..              
T Consensus        56 d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~--------------  112 (299)
T 1n2s_A           56 DVIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTG--------------  112 (299)
T ss_dssp             SEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCT--------------
T ss_pred             CEEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCC--------------
Confidence            9999999865431    23456788899999999999998854    23 4899999975442210              


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                       ...+.+..+..+...|+.+|.+.+.+++.++.     +++.+.||++.++.
T Consensus       113 -----------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~ilRp~~v~G~~  158 (299)
T 1n2s_A          113 -----------------DIPWQETDATSPLNVYGKTKLAGEKALQDNCP-----KHLIFRTSWVYAGK  158 (299)
T ss_dssp             -----------------TCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-----SEEEEEECSEECSS
T ss_pred             -----------------CCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-----CeEEEeeeeecCCC
Confidence                             01123333445567999999999999988743     68889999998764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.73  E-value=2.7e-17  Score=143.17  Aligned_cols=169  Identities=14%  Similarity=0.078  Sum_probs=122.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++++||||||+|+||++++++|+++|+      +..              .....+..+.+|+++.+++.++++..  
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------------~~~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------------EDWVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------------CEEEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------------ccccccCceecccCCHHHHHHHHhhc--
Confidence            45678999999999999999999999998      110              01111444578999999988887743  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         ++|+|||+|+.....   ....+...+.+++|+.++.++++++..    .+.+++|++||........         
T Consensus        61 ---~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~---------  121 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKT---------  121 (319)
T ss_dssp             ---CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSC---------
T ss_pred             ---CCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCC---------
Confidence               699999999975321   124456678899999999999998854    3446999999975432110         


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhc-----CCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANR-----GWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                            ...+.+.     ...+....|+.+|.+.+.+++.++.+. +++++.+.|+.+..+.
T Consensus       122 ----------------------~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~Gp~  176 (319)
T 4b8w_A          122 ----------------------TYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-GCTFTAVIPTNVFGPH  176 (319)
T ss_dssp             ----------------------CSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTT
T ss_pred             ----------------------CCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-CCCEEEEeeccccCCC
Confidence                                  0001111     111333469999999999999998875 8999999999997764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.70  E-value=1.1e-17  Score=146.33  Aligned_cols=174  Identities=14%  Similarity=0.061  Sum_probs=119.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++++||||||+|+||++++++|+++|++|++++|+........+.+.... ....+.++.+|++              
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS--------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT--------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc--------------
Confidence            3568999999999999999999999999999999998752000000000000 0011344445554              


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         ++|+|||+|+......    ..+.....++ |+.++.++++++...    +.+++|++||.......          
T Consensus        69 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~----------  126 (321)
T 3vps_A           69 ---DVRLVYHLASHKSVPR----SFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQA----------  126 (321)
T ss_dssp             ---TEEEEEECCCCCCHHH----HTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSC----------
T ss_pred             ---cCCEEEECCccCChHH----HHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCC----------
Confidence               7999999998765321    2223344566 999999999988653    34699999996543221          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCe-EEEeecCCeeecCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-CVNCVCPGFVKTDI  235 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i-~vn~v~pG~v~T~~  235 (275)
                                           ....+.+..+..+...|+.+|.+.+.+++.++.+. ++ +++.+.||.+..+.
T Consensus       127 ---------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~  178 (321)
T 3vps_A          127 ---------------------DTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS-VAPEVGIVRFFNVYGPG  178 (321)
T ss_dssp             ---------------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS-SSCEEEEEEECEEECTT
T ss_pred             ---------------------CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCceEEEEeccccCcC
Confidence                                 01123344444567899999999999999998875 78 99999999998764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.70  E-value=2.1e-17  Score=142.80  Aligned_cols=195  Identities=13%  Similarity=0.024  Sum_probs=134.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +++++|||| +|+||++++++|+++|++|++++|+..+.          .   ..+.++.+|+++.+++.++++      
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~---~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------P---AGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------C---TTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------c---cCCceEEccCCChHHHHHhhc------
Confidence            357899999 59999999999999999999999987641          1   227889999999998776654      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +++|+|||+|+..         ....+..+++|+.++.++++++..    .+.+++|++||.......            
T Consensus        62 ~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~------------  116 (286)
T 3gpi_A           62 LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALEG----APLQHVFFVSSTGVYGQE------------  116 (286)
T ss_dssp             GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTTT----SCCCEEEEEEEGGGCCCC------------
T ss_pred             CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHhh----CCCCEEEEEcccEEEcCC------------
Confidence            3699999999852         234567789999999999998753    445799999996543221            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC------
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH------  238 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~------  238 (275)
                                         ....+.+..+..+...|+.+|.+.+.+ +..      ++++.+.||.+..+....      
T Consensus       117 -------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~------~~~~ilR~~~v~G~~~~~~~~~~~  170 (286)
T 3gpi_A          117 -------------------VEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA------YSSTILRFSGIYGPGRLRMIRQAQ  170 (286)
T ss_dssp             -------------------CSSEECTTSCCCCCSHHHHHHHHHHHH-GGG------SSEEEEEECEEEBTTBCHHHHHTT
T ss_pred             -------------------CCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc------CCeEEEecccccCCCchhHHHHHH
Confidence                               011133444455678999999999988 543      788899999997764320      


Q ss_pred             -----------CCCCChhhhhccceeecccCC-CCCcceEeccC
Q 023896          239 -----------AGILSVEEGAESPVKLALLPD-GGPTGRFFLRK  270 (275)
Q Consensus       239 -----------~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~  270 (275)
                                 ......++.++.++.++..+. ....+.|.+.+
T Consensus       171 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~  214 (286)
T 3gpi_A          171 TPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD  214 (286)
T ss_dssp             CGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             hcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC
Confidence                       012355667776666665532 22344444443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.67  E-value=2.2e-16  Score=136.13  Aligned_cols=168  Identities=9%  Similarity=-0.030  Sum_probs=124.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      |++|||||+|+||++++++|+++  |++|++++|+..+.....    ..     .+.++.+|+++.+++.++++      
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~~-----~~~~~~~D~~d~~~l~~~~~------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQ-----GVEVRHGDYNQPESLQKAFA------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----HT-----TCEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----hc-----CCeEEEeccCCHHHHHHHHh------
Confidence            46999999999999999999999  999999999886544321    11     17788999999988777654      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|++||+|+...       . +      ++|+.++.++++++..    .+.+++|++||.....              
T Consensus        66 -~~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~--------------  112 (287)
T 2jl1_A           66 -GVSKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAEE--------------  112 (287)
T ss_dssp             -TCSEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGGG--------------
T ss_pred             -cCCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCCC--------------
Confidence             6899999998521       1 1      5788899998888754    3456999999965321              


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC-cC------
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI-NF------  237 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~-~~------  237 (275)
                                                     ....|+.+|.+.+.+++.     .+++++.+.||++.++. ..      
T Consensus       113 -------------------------------~~~~y~~~K~~~E~~~~~-----~~~~~~ilrp~~~~~~~~~~~~~~~~  156 (287)
T 2jl1_A          113 -------------------------------SIIPLAHVHLATEYAIRT-----TNIPYTFLRNALYTDFFVNEGLRAST  156 (287)
T ss_dssp             -------------------------------CCSTHHHHHHHHHHHHHH-----TTCCEEEEEECCBHHHHSSGGGHHHH
T ss_pred             -------------------------------CCCchHHHHHHHHHHHHH-----cCCCeEEEECCEeccccchhhHHHHh
Confidence                                           113799999999998863     48889999999886654 10      


Q ss_pred             ------------CCCCCChhhhhccceeecccC
Q 023896          238 ------------HAGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 ------------~~~~~~~~~~a~~~~~~~~~~  258 (275)
                                  .......++.++.++..+..+
T Consensus       157 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          157 ESGAIVTNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             HHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             hCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence                        012346777777776665543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.67  E-value=4.4e-16  Score=145.33  Aligned_cols=181  Identities=15%  Similarity=0.064  Sum_probs=126.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH---HHHHHHHHhcC------CCCCceeEEEecccChHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG---LEAVEKLKASG------VDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~---~~~~~~l~~~~------~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      .++||||||+|+||++++++|.+.|++|++++|+....   +...+.+....      ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47899999999999999999999999999999988732   22222222110      00123899999999988765  


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                            ...++|+|||+|+....       ...+.+.+.+|+.++.++++++..     ...++|++||...  +.....
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v--G~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV--GTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT--TSEECT
T ss_pred             ------CccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh--ccCCcc
Confidence                  34689999999987542       245678899999999999998865     3469999999775  210000


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCC---CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW---CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                               ......+.+..+   ..+...|+.+|.+.+.+++.++.  .+++++.+.||.|..
T Consensus       288 -------------------------~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~gi~~~ilRp~~v~G  340 (508)
T 4f6l_B          288 -------------------------DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN--NGLDGRIVRVGNLTS  340 (508)
T ss_dssp             -------------------------TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH--TTCEEEEEEECCEES
T ss_pred             -------------------------CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH--cCCCEEEEecceecc
Confidence                                     000011222222   23567899999999999998764  589999999999977


Q ss_pred             CC
Q 023896          234 DI  235 (275)
Q Consensus       234 ~~  235 (275)
                      +.
T Consensus       341 ~~  342 (508)
T 4f6l_B          341 PY  342 (508)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.66  E-value=1.7e-15  Score=135.07  Aligned_cols=152  Identities=16%  Similarity=0.126  Sum_probs=110.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEec-ccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD-ISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~   82 (275)
                      +.++++|||||+|+||++++++|+++|++|++++|+..+..  .+.+...    ..+.++.+| +++.+++.++++    
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~----~~v~~v~~D~l~d~~~l~~~~~----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI----PNVTLFQGPLLNNVPLMDTLFE----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS----TTEEEEESCCTTCHHHHHHHHT----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc----CCcEEEECCccCCHHHHHHHHh----
Confidence            45788999999999999999999999999999999887542  1233321    127788999 999998877664    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCcc-ccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVS-ALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~-~~~~~~~~~~~~  160 (275)
                         .+|++|||++....               +.|..+ .++++++    ++.+ .+++|++||... ..+.        
T Consensus        73 ---~~d~Vi~~a~~~~~---------------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~--------  121 (352)
T 1xgk_A           73 ---GAHLAFINTTSQAG---------------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGP--------  121 (352)
T ss_dssp             ---TCSEEEECCCSTTS---------------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSS--------
T ss_pred             ---cCCEEEEcCCCCCc---------------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCC--------
Confidence               68999998864210               124433 4444444    4444 579999999752 2110        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                        .....|..+|.+.+.+++..     +++++.|.||++.+..
T Consensus       122 ----------------------------------~~~~~y~~sK~~~E~~~~~~-----gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          122 ----------------------------------WPAVPMWAPKFTVENYVRQL-----GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             ----------------------------------CCCCTTTHHHHHHHHHHHTS-----SSCEEEEEECEEGGGC
T ss_pred             ----------------------------------CCCccHHHHHHHHHHHHHHc-----CCCEEEEecceecCCc
Confidence                                              23467999999999998763     7889999999875543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.65  E-value=1.3e-15  Score=132.30  Aligned_cols=156  Identities=16%  Similarity=0.063  Sum_probs=111.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||||+|+||++++++|+++| ++|++++|+..+...  +.+...+     +.++.+|++|.+++.++++      
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~~-----~~~~~~D~~d~~~l~~~~~------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQG-----AEVVQGDQDDQVIMELALN------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHTT-----CEEEECCTTCHHHHHHHHT------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHCC-----CEEEEecCCCHHHHHHHHh------
Confidence            5899999999999999999999999 999999999865422  2232221     7788999999998877765      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|||+++.....            ....|+.++..+++++    ++.+.++||++|+ .+..+.            
T Consensus        72 -~~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~-~~~~~~------------  121 (299)
T 2wm3_A           72 -GAYATFIVTNYWESC------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGL-ENIKKL------------  121 (299)
T ss_dssp             -TCSEEEECCCHHHHT------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCC-CCHHHH------------
T ss_pred             -cCCEEEEeCCCCccc------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcC-cccccc------------
Confidence             689999999843210            1234445555555554    4445579999655 332110            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                              .+ .  .....|..+|.+++.+++..     +++++.+.||++.+++.
T Consensus       122 ------------------------~~-~--~~~~~y~~sK~~~e~~~~~~-----gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A          122 ------------------------TA-G--RLAAAHFDGKGEVEEYFRDI-----GVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             ------------------------TT-T--SCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCEEGGGGG
T ss_pred             ------------------------CC-C--cccCchhhHHHHHHHHHHHC-----CCCEEEEeecHHhhhch
Confidence                                    00 0  12467999999999988753     78999999999988753

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.63  E-value=4.1e-15  Score=128.17  Aligned_cols=185  Identities=11%  Similarity=-0.027  Sum_probs=125.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +++||||| |+||++++++|+++|++|++++|+..+......    .     .+.++.+|+++.+            +.+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-----~~~~~~~D~~d~~------------~~~   63 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----S-----GAEPLLWPGEEPS------------LDG   63 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----T-----TEEEEESSSSCCC------------CTT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----C-----CCeEEEecccccc------------cCC
Confidence            68999998 999999999999999999999999876544322    1     2888999999833            458


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc--CCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--SDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +|+|||+|+.....       +..          +..++++    +++  .+..++|++||.......            
T Consensus        64 ~d~vi~~a~~~~~~-------~~~----------~~~l~~a----~~~~~~~~~~~v~~Ss~~vyg~~------------  110 (286)
T 3ius_A           64 VTHLLISTAPDSGG-------DPV----------LAALGDQ----IAARAAQFRWVGYLSTTAVYGDH------------  110 (286)
T ss_dssp             CCEEEECCCCBTTB-------CHH----------HHHHHHH----HHHTGGGCSEEEEEEEGGGGCCC------------
T ss_pred             CCEEEECCCccccc-------cHH----------HHHHHHH----HHhhcCCceEEEEeecceecCCC------------
Confidence            99999999865332       010          1233333    333  344699999996433211            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC-----
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA-----  239 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~-----  239 (275)
                                         ....+.+..+..+...|+.+|.+.+.+++.+    .+++++.+.||.+..+.....     
T Consensus       111 -------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~  167 (286)
T 3ius_A          111 -------------------DGAWVDETTPLTPTAARGRWRVMAEQQWQAV----PNLPLHVFRLAGIYGPGRGPFSKLGK  167 (286)
T ss_dssp             -------------------TTCEECTTSCCCCCSHHHHHHHHHHHHHHHS----TTCCEEEEEECEEEBTTBSSSTTSSS
T ss_pred             -------------------CCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh----cCCCEEEEeccceECCCchHHHHHhc
Confidence                               0112334445556778999999999999877    689999999999987642111     


Q ss_pred             -------------CCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          240 -------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       240 -------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                   .....++.++.++.++..+.  ..+.|.+.++
T Consensus       168 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~  210 (286)
T 3ius_A          168 GGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD--PGAVYNVCDD  210 (286)
T ss_dssp             SCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC--TTCEEEECCS
T ss_pred             CCccccCCCCcccceEEHHHHHHHHHHHHhCCC--CCCEEEEeCC
Confidence                         12345666777666665444  3335544443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.62  E-value=1.7e-15  Score=130.47  Aligned_cols=165  Identities=10%  Similarity=0.050  Sum_probs=119.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++|||||+|+||++++++|+++  |++|++++|+..+.....    ..     .+.++.+|+++.+++.++++       
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~-----~~~~~~~D~~d~~~~~~~~~-------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQ-----GITVRQADYGDEAALTSALQ-------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HT-----TCEEEECCTTCHHHHHHHTT-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cC-----CCeEEEcCCCCHHHHHHHHh-------
Confidence            4899999999999999999998  999999999886544321    11     17788999999988776654       


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|++||+|+...                ..|+.++.++++++..    .+.+++|++||.... +              
T Consensus        65 ~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~--------------  109 (286)
T 2zcu_A           65 GVEKLLLISSSEV----------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD-T--------------  109 (286)
T ss_dssp             TCSEEEECC------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT-T--------------
T ss_pred             CCCEEEEeCCCCc----------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-C--------------
Confidence            6899999998521                1367777777777654    345799999996543 1              


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcC--------
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINF--------  237 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~--------  237 (275)
                                                    ....|+.+|.+.+.+++.     .+++++.+.||++.+++..        
T Consensus       110 ------------------------------~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~~~~~~~~~~~~~~~~  154 (286)
T 2zcu_A          110 ------------------------------SPLGLADEHIETEKMLAD-----SGIVYTLLRNGWYSENYLASAPAALEH  154 (286)
T ss_dssp             ------------------------------CCSTTHHHHHHHHHHHHH-----HCSEEEEEEECCBHHHHHTTHHHHHHH
T ss_pred             ------------------------------CcchhHHHHHHHHHHHHH-----cCCCeEEEeChHHhhhhHHHhHHhhcC
Confidence                                          124799999999998874     3889999999988665310        


Q ss_pred             ----------CCCCCChhhhhccceeecccC
Q 023896          238 ----------HAGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       238 ----------~~~~~~~~~~a~~~~~~~~~~  258 (275)
                                ......+++.++.++.++..+
T Consensus       155 ~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          155 GVFIGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             TEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             CceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence                      012457788888777766644

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.59  E-value=3.8e-14  Score=125.68  Aligned_cols=154  Identities=10%  Similarity=0.036  Sum_probs=112.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh----hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      |..++||||||+|+||++++++|+++|++|++++|+.    .+.. ..+.+...     .+.++.+|++|.+++.+++++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~~-----~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALEDK-----GAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHHT-----TCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHhC-----CcEEEEeecCCHHHHHHHHhh
Confidence            4467899999999999999999999999999999977    2222 22333332     288899999999998888765


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHH
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .     ++|+|||+++..                   |+.++.++++++...    + ..++|+  |..+..        
T Consensus        82 ~-----~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~~----g~v~~~v~--S~~g~~--------  123 (346)
T 3i6i_A           82 H-----EIDIVVSTVGGE-------------------SILDQIALVKAMKAV----GTIKRFLP--SEFGHD--------  123 (346)
T ss_dssp             T-----TCCEEEECCCGG-------------------GGGGHHHHHHHHHHH----CCCSEEEC--SCCSSC--------
T ss_pred             C-----CCCEEEECCchh-------------------hHHHHHHHHHHHHHc----CCceEEee--cccCCC--------
Confidence            3     799999999862                   778888888887542    3 346665  333321        


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                   ..+..+.++...|+.+|.+++.+.+.     .++.++.+.||++....
T Consensus       124 -----------------------------~~e~~~~~p~~~y~~sK~~~e~~l~~-----~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          124 -----------------------------VNRADPVEPGLNMYREKRRVRQLVEE-----SGIPFTYICCNSIASWP  166 (346)
T ss_dssp             -----------------------------TTTCCCCTTHHHHHHHHHHHHHHHHH-----TTCCBEEEECCEESSCC
T ss_pred             -----------------------------CCccCcCCCcchHHHHHHHHHHHHHH-----cCCCEEEEEeccccccc
Confidence                                         11122334567899999999988875     47888999999886643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.57  E-value=2.1e-14  Score=124.93  Aligned_cols=150  Identities=13%  Similarity=0.137  Sum_probs=104.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-------hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-------KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +++++||||+|+||++++++|+++|++|++.+|+.       .+.+. .+++...+     +.++++|+++.+++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~-----v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSLG-----VILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHTT-----CEEEECCTTCHHHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhCC-----CEEEEeCCCCHHHHHHHHh
Confidence            46799999999999999999999999999999987       44333 23333222     7789999999988777765


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHH
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~  157 (275)
                             ++|+|||+++...                   +.++.++++++.    +.+ .+++|  .|..+....     
T Consensus        76 -------~~d~vi~~a~~~~-------------------~~~~~~l~~aa~----~~g~v~~~v--~S~~g~~~~-----  118 (307)
T 2gas_A           76 -------QVDIVICAAGRLL-------------------IEDQVKIIKAIK----EAGNVKKFF--PSEFGLDVD-----  118 (307)
T ss_dssp             -------TCSEEEECSSSSC-------------------GGGHHHHHHHHH----HHCCCSEEE--CSCCSSCTT-----
T ss_pred             -------CCCEEEECCcccc-------------------cccHHHHHHHHH----hcCCceEEe--ecccccCcc-----
Confidence                   6999999998642                   234555666553    333 45776  343432110     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                     ......+....| .+|.+++.+.+..     +++++.++||++.+++
T Consensus       119 -------------------------------~~~~~~p~~~~y-~sK~~~e~~~~~~-----~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          119 -------------------------------RHDAVEPVRQVF-EEKASIRRVIEAE-----GVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             -------------------------------SCCCCTTHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEETTTT
T ss_pred             -------------------------------cccCCCcchhHH-HHHHHHHHHHHHc-----CCCeEEEEcceeeccc
Confidence                                           000111234679 9999999888643     7888999999987754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.55  E-value=3.9e-14  Score=132.49  Aligned_cols=199  Identities=12%  Similarity=0.005  Sum_probs=133.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++||||||+|+||++++++|+++|++|++++|+..+.                 ..+.+|+.+..         .+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~~---------~~~l~  200 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNPA---------SDLLD  200 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSCC---------TTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccchh---------HHhcC
Confidence            57899999999999999999999999999999987541                 12556776432         23345


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|||+|+.....   ..+.+.....+++|+.++.++++++..   +.+.+++|++||.......             
T Consensus       201 ~~D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~-------------  261 (516)
T 3oh8_A          201 GADVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHD-------------  261 (516)
T ss_dssp             TCSEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSE-------------
T ss_pred             CCCEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCC-------------
Confidence            899999999875432   235567888999999999999997432   2345699999995533201             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCC-------
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH-------  238 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~-------  238 (275)
                                       .....+.+..+. +...|+.+|...+.+.+....  .+++++.+.||.+.++....       
T Consensus       262 -----------------~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~~--~gi~~~ilRp~~v~Gp~~~~~~~~~~~  321 (516)
T 3oh8_A          262 -----------------RGDEILTEESES-GDDFLAEVCRDWEHATAPASD--AGKRVAFIRTGVALSGRGGMLPLLKTL  321 (516)
T ss_dssp             -----------------EEEEEECTTSCC-CSSHHHHHHHHHHHTTHHHHH--TTCEEEEEEECEEEBTTBSHHHHHHHT
T ss_pred             -----------------CCCCccCCCCCC-CcChHHHHHHHHHHHHHHHHh--CCCCEEEEEeeEEECCCCChHHHHHHH
Confidence                             001123333333 566789889888877654322  58999999999998863100       


Q ss_pred             ---------------CCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          239 ---------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       239 ---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                                     ......++.++.++.++..+.  ..+.|.+.++
T Consensus       322 ~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~~~  367 (516)
T 3oh8_A          322 FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISGPINAVAP  367 (516)
T ss_dssp             TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CCEEEEESCS
T ss_pred             HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cCCcEEEECC
Confidence                           012355677777666665443  4455655543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.55  E-value=2.5e-14  Score=127.97  Aligned_cols=134  Identities=18%  Similarity=0.058  Sum_probs=108.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +||||||+|+||++++++|+++|+ +|+..+|+                            ++.+++.++++       +
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH-------H
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc-------c
Confidence            699999999999999999999998 77776664                            56777777765       5


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCC-CeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +|+|||+||....        +...+.+++|+.++.++++++..    .+. .++|++||....                
T Consensus        47 ~d~Vih~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~----------------   98 (369)
T 3st7_A           47 ADFIVHLAGVNRP--------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQAT----------------   98 (369)
T ss_dssp             CSEEEECCCSBCT--------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGG----------------
T ss_pred             CCEEEECCcCCCC--------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhc----------------
Confidence            8999999986542        34556788999999999998753    333 389999996543                


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                    +...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+.
T Consensus        99 ------------------------------~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~i~R~~~v~G~~  137 (369)
T 3st7_A           99 ------------------------------QDNPYGESKLQGEQLLREYAEEY-GNTVYIYRWPNLFGKW  137 (369)
T ss_dssp             ------------------------------SCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTT
T ss_pred             ------------------------------CCCCchHHHHHHHHHHHHHHHHh-CCCEEEEECCceeCCC
Confidence                                          14689999999999999998874 7888999999987763

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.54  E-value=2.9e-14  Score=126.84  Aligned_cols=172  Identities=13%  Similarity=0.020  Sum_probs=117.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-----CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKG-----ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g-----~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....        .  ....+.++.+|+++.+++.++++. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~~~-   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAKLSP-   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHHHTT-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHHHhc-
Confidence            4789999999999999999999999     99999999875422        0  112378889999999887776652 


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEE-------EEecCccccCCC
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV-------NLSSYVSALKDL  153 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv-------~vsS~~~~~~~~  153 (275)
                         +.++|+|||+|+...         ++.++.+++|+.++.++++++.+...  +..++|       ++||........
T Consensus        70 ---~~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~  135 (364)
T 2v6g_A           70 ---LTDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIE  135 (364)
T ss_dssp             ---CTTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSC
T ss_pred             ---CCCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccc
Confidence               234999999998642         24677889999999999999876421  234676       677754321100


Q ss_pred             cHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCC-CCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          154 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                      +                             ....+.+..+. +....|.    +.+.+++.++.+..++++..+.|+.+.
T Consensus       136 ~-----------------------------~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~~~~~~~~~ilRp~~v~  182 (364)
T 2v6g_A          136 S-----------------------------HDPPYTEDLPRLKYMNFYY----DLEDIMLEEVEKKEGLTWSVHRPGNIF  182 (364)
T ss_dssp             C-----------------------------CCSSBCTTSCCCSSCCHHH----HHHHHHHHHHTTSTTCEEEEEEESSEE
T ss_pred             c-----------------------------CCCCCCccccCCccchhhH----HHHHHHHHHhhcCCCceEEEECCCcee
Confidence            0                             00112222221 2244563    356666666654434999999999997


Q ss_pred             cCC
Q 023896          233 TDI  235 (275)
Q Consensus       233 T~~  235 (275)
                      .+.
T Consensus       183 G~~  185 (364)
T 2v6g_A          183 GFS  185 (364)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.52  E-value=2.7e-13  Score=118.15  Aligned_cols=153  Identities=15%  Similarity=0.128  Sum_probs=106.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-----hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++||||+|+||++++++|+++|++|++.+|+.     .+.+. .+.+...     .+.++.+|+++.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~-----~~~~~~~D~~d~~~l~~~~~--   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQL-----GAKLIEASLDDHQRLVDALK--   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHTT-----TCEEECCCSSCHHHHHHHHT--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHhC-----CeEEEeCCCCCHHHHHHHHh--
Confidence            46799999999999999999999999999999984     22222 2233221     17788999999988777765  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                           ++|+|||+++.....               .|+.++.++++++..    .+ .+++|+  |..+.....      
T Consensus        76 -----~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~------  123 (313)
T 1qyd_A           76 -----QVDVVISALAGGVLS---------------HHILEQLKLVEAIKE----AGNIKRFLP--SEFGMDPDI------  123 (313)
T ss_dssp             -----TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHHH----SCCCSEEEC--SCCSSCTTS------
T ss_pred             -----CCCEEEECCccccch---------------hhHHHHHHHHHHHHh----cCCCceEEe--cCCcCCccc------
Confidence                 699999999865321               267777777777643    34 468874  433321100      


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                                  . .....+....| .+|.+++.+.+.     .+++++.+.||++.+
T Consensus       124 ----------------------------~-~~~~~p~~~~y-~sK~~~e~~~~~-----~g~~~~ilrp~~~~~  162 (313)
T 1qyd_A          124 ----------------------------M-EHALQPGSITF-IDKRKVRRAIEA-----ASIPYTYVSSNMFAG  162 (313)
T ss_dssp             ----------------------------C-CCCCSSTTHHH-HHHHHHHHHHHH-----TTCCBCEEECCEEHH
T ss_pred             ----------------------------c-ccCCCCCcchH-HHHHHHHHHHHh-----cCCCeEEEEeceecc
Confidence                                        0 00111335678 999999988763     367788888988855

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.51  E-value=7.6e-14  Score=122.23  Aligned_cols=148  Identities=15%  Similarity=0.114  Sum_probs=100.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-----hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++||||+|+||++++++|+++|++|++++|+.     .......+.+...+     +.++.+|++|.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~-----v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMG-----VTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTT-----CEEEECCTTCHHHHHHHHT--
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCC-----cEEEEecCCCHHHHHHHHc--
Confidence            36799999999999999999999999999999986     12222223333221     7889999999988877765  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                           .+|+|||+++...                   +.++.++++++..    .+ .+++|  .|..+....       
T Consensus        77 -----~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~-------  119 (321)
T 3c1o_A           77 -----QVDIVISALPFPM-------------------ISSQIHIINAIKA----AGNIKRFL--PSDFGCEED-------  119 (321)
T ss_dssp             -----TCSEEEECCCGGG-------------------SGGGHHHHHHHHH----HCCCCEEE--CSCCSSCGG-------
T ss_pred             -----CCCEEEECCCccc-------------------hhhHHHHHHHHHH----hCCccEEe--ccccccCcc-------
Confidence                 5899999998532                   3455566665543    34 45777  343332110       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCC-CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                                    +..+ .+....| .+|.+++.+++..     +++++.+.||++.+
T Consensus       120 ------------------------------~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~lrp~~~~~  158 (321)
T 3c1o_A          120 ------------------------------RIKPLPPFESVL-EKKRIIRRAIEAA-----ALPYTYVSANCFGA  158 (321)
T ss_dssp             ------------------------------GCCCCHHHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEEHH
T ss_pred             ------------------------------ccccCCCcchHH-HHHHHHHHHHHHc-----CCCeEEEEeceecc
Confidence                                          0000 0124579 9999999888743     56777788887754

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.51  E-value=5.5e-14  Score=123.07  Aligned_cols=148  Identities=14%  Similarity=0.148  Sum_probs=100.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+++|||||+|+||++++++|+++|++|++++|+........+++...+     +.++.+|++|.+++.++++       
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~-----v~~v~~Dl~d~~~l~~a~~-------   78 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG-----AIIVKGELDEHEKLVELMK-------   78 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT-----CEEEECCTTCHHHHHHHHT-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC-----CEEEEecCCCHHHHHHHHc-------
Confidence            3589999999999999999999999999999998752222223333322     7789999999998877765       


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      ++|+|||+++...                   +.++.++++++.    +.+ .+++|+  |..+....            
T Consensus        79 ~~d~vi~~a~~~~-------------------~~~~~~l~~aa~----~~g~v~~~v~--S~~g~~~~------------  121 (318)
T 2r6j_A           79 KVDVVISALAFPQ-------------------ILDQFKILEAIK----VAGNIKRFLP--SDFGVEED------------  121 (318)
T ss_dssp             TCSEEEECCCGGG-------------------STTHHHHHHHHH----HHCCCCEEEC--SCCSSCTT------------
T ss_pred             CCCEEEECCchhh-------------------hHHHHHHHHHHH----hcCCCCEEEe--eccccCcc------------
Confidence            6899999998531                   344555555553    333 457774  43332110            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCC-CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeec
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  233 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T  233 (275)
                                               +... .+....| .+|.+++.+.+.     .++.++.+.||++..
T Consensus       122 -------------------------~~~~~~p~~~~y-~sK~~~e~~~~~-----~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A          122 -------------------------RINALPPFEALI-ERKRMIRRAIEE-----ANIPYTYVSANCFAS  160 (318)
T ss_dssp             -------------------------TCCCCHHHHHHH-HHHHHHHHHHHH-----TTCCBEEEECCEEHH
T ss_pred             -------------------------cccCCCCcchhH-HHHHHHHHHHHh-----cCCCeEEEEcceehh
Confidence                                     0000 0123568 999999988764     367777888887754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.50  E-value=1.6e-13  Score=118.43  Aligned_cols=106  Identities=13%  Similarity=0.071  Sum_probs=80.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++|||||+|+||++++++|++. |++|++++|+..+....    ..     ..+.++.+|++|.+++.++++       +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~-----~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WR-----GKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----GB-----TTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----hh-----CCCEEEEcCCCCHHHHHHHHh-------C
Confidence            5999999999999999999998 99999999998753321    11     128889999999988777664       7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      +|+|||+++.....              ..|+.++.++++++    ++.+.++||++||..
T Consensus        66 ~d~vi~~a~~~~~~--------------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           66 MDTVVFIPSIIHPS--------------FKRIPEVENLVYAA----KQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CSEEEECCCCCCSH--------------HHHHHHHHHHHHHH----HHTTCCEEEEEEESC
T ss_pred             CCEEEEeCCCCccc--------------hhhHHHHHHHHHHH----HHcCCCEEEEEcccC
Confidence            89999999864321              12455555555554    445567999999954

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.48  E-value=2.7e-13  Score=117.87  Aligned_cols=149  Identities=17%  Similarity=0.118  Sum_probs=101.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++||||+|+||++++++|+++|++|++.+|+...     .....+.+...     .+.++.+|+++.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~-----~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS-----GANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT-----TCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC-----CCEEEEeccCCHHHHHHHHc--
Confidence            4679999999999999999999999999999998432     11122233222     17789999999998887776  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                           ++|+|||+++...                   +.++.++++++..    .+ .+++|+  |..+....       
T Consensus        77 -----~~d~vi~~a~~~~-------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~-------  119 (308)
T 1qyc_A           77 -----NVDVVISTVGSLQ-------------------IESQVNIIKAIKE----VGTVKRFFP--SEFGNDVD-------  119 (308)
T ss_dssp             -----TCSEEEECCCGGG-------------------SGGGHHHHHHHHH----HCCCSEEEC--SCCSSCTT-------
T ss_pred             -----CCCEEEECCcchh-------------------hhhHHHHHHHHHh----cCCCceEee--cccccCcc-------
Confidence                 5899999998532                   3345556665543    33 467773  43332110       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCC-CCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                                    +..+ .+....| .+|.+++.+.+..     +++++.+.||++.+.
T Consensus       120 ------------------------------~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~~r~~~~~~~  159 (308)
T 1qyc_A          120 ------------------------------NVHAVEPAKSVF-EVKAKVRRAIEAE-----GIPYTYVSSNCFAGY  159 (308)
T ss_dssp             ------------------------------SCCCCTTHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEEHHH
T ss_pred             ------------------------------ccccCCcchhHH-HHHHHHHHHHHhc-----CCCeEEEEeceeccc
Confidence                                          0011 1224578 9999999888753     677788889988653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.40  E-value=2e-13  Score=118.28  Aligned_cols=109  Identities=17%  Similarity=0.068  Sum_probs=86.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|++|||||+||||+++++.|+++|++|++++|+.+++++..+++.... .   +.++.+|+++.+++.++++    
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-~---~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-K---VNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-T---CCCEEEECCSHHHHHHHTT----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-C---cEEEEecCCCHHHHHHHHH----
Confidence            3678999999999999999999999999999999999988888877765421 1   5678899999988766654    


Q ss_pred             hcCCccEEEcCCcccc-cchhhccch-hHHHHhHHhhcccHH
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTY-ELAVECLKTNYYGTK  122 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~-~~~~~~~~~N~~~~~  122 (275)
                         .+|+||||+|... ..+..+.+. +++...+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence               5899999997532 223323343 677789999999988

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.35  E-value=2.1e-11  Score=105.67  Aligned_cols=198  Identities=13%  Similarity=-0.027  Sum_probs=123.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +||||||+|.||++++++|+++||+|+++.|++..             .     -+..|     .+      ..+.+..+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~-----~~~~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------G-----RITWD-----EL------AASGLPSC   52 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------T-----EEEHH-----HH------HHHCCCSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------C-----eeecc-----hh------hHhhccCC
Confidence            59999999999999999999999999999997532             0     01111     10      11234689


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |.+||.|+..........+.+...++++.|+.++.++++.+...  ..+...+|+.||.......               
T Consensus        53 d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~---------------  115 (298)
T 4b4o_A           53 DAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPS---------------  115 (298)
T ss_dssp             SEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCC---------------
T ss_pred             CEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCC---------------
Confidence            99999987543333333466677788999999999988876542  2233457777775443221               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcC----------
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINF----------  237 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~----------  237 (275)
                                      ......+..+..+...|+..+...+....   ....++++..+.||.|..+...          
T Consensus       116 ----------------~~~~~~E~~p~~~~~~~~~~~~~~e~~~~---~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~  176 (298)
T 4b4o_A          116 ----------------LTAEYDEDSPGGDFDFFSNLVTKWEAAAR---LPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFR  176 (298)
T ss_dssp             ----------------SSCCBCTTCCCSCSSHHHHHHHHHHHHHC---CSSSSSEEEEEEECEEECTTSHHHHHHHHHHH
T ss_pred             ----------------CCCcccccCCccccchhHHHHHHHHHHHH---hhccCCceeeeeeeeEEcCCCCchhHHHHHHh
Confidence                            01123333444445566666555543210   1115789999999988765310          


Q ss_pred             ------------CCCCCChhhhhccceeecccCCCCCcceEeccCcc
Q 023896          238 ------------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       238 ------------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                                  .......++.++.++.++..+.  ..|.|.+.++.
T Consensus       177 ~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g~yn~~~~~  221 (298)
T 4b4o_A          177 LGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH--VHGVLNGVAPS  221 (298)
T ss_dssp             TTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCEEEEESCSC
T ss_pred             cCCcceecccCceeecCcHHHHHHHHHHHHhCCC--CCCeEEEECCC
Confidence                        0112456777777776666554  56666665543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.23  E-value=1.8e-11  Score=107.93  Aligned_cols=170  Identities=13%  Similarity=0.020  Sum_probs=109.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      ++++||||+|+||++++..|+++|+       +|++.+++.  .+......++....     +.+. .|+.+.+++.+.+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~-----~~~~-~di~~~~~~~~a~   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-----FPLL-AGLEATDDPKVAF   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-----CTTE-EEEEEESCHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc-----cccc-CCeEeccChHHHh
Confidence            5799999999999999999999986       899999875  23333333443221     1122 5776655544433


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHH
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  157 (275)
                             ...|++||.||.....   .   +...+.+++|+.++..+++++...-  ....+++++|+.....       
T Consensus        79 -------~~~D~Vih~Ag~~~~~---~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~-------  136 (327)
T 1y7t_A           79 -------KDADYALLVGAAPRKA---G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTN-------  136 (327)
T ss_dssp             -------TTCSEEEECCCCCCCT---T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHH-------
T ss_pred             -------CCCCEEEECCCcCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhh-------
Confidence                   2689999999975422   1   2345679999999999999987641  1345888877732110       


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcC-CCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeee
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG-WCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVK  232 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~  232 (275)
                                     .+..            .+.. .+++...|+.+|...+.+.+.++..+ ++.+..+.|.+|.
T Consensus       137 ---------------~~~~------------~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~-g~~~~~vr~~~V~  184 (327)
T 1y7t_A          137 ---------------ALIA------------YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT-GTGVDRIRRMTVW  184 (327)
T ss_dssp             ---------------HHHH------------HHTCTTSCGGGEEECCHHHHHHHHHHHHHHH-TCCGGGEECCEEE
T ss_pred             ---------------HHHH------------HHHcCCCChhheeccchHHHHHHHHHHHHHh-CcChhheeeeEEE
Confidence                           0000            0111 22445679999999999888888764 4444444444443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.05  E-value=1.4e-10  Score=96.20  Aligned_cols=83  Identities=13%  Similarity=0.205  Sum_probs=63.5

Q ss_pred             ccCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEec
Q 023896            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (275)
Q Consensus         3 ~~~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D   66 (275)
                      +++||+||||||                +||||.++|+.|+++|++|++++++.. ++        .. ..  +  ..+|
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~-~g--~--~~~d   70 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TP-PF--V--KRVD   70 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CC-TT--E--EEEE
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cC-CC--C--eEEc
Confidence            578999999999                699999999999999999999988652 10        00 01  2  2456


Q ss_pred             ccChHHHHHHHHHHHhhcCCccEEEcCCcccccchh
Q 023896           67 ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKV  102 (275)
Q Consensus        67 l~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~  102 (275)
                      +.+   +..+++.+.+.++++|++|||||+....+.
T Consensus        71 v~~---~~~~~~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           71 VMT---ALEMEAAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             CCS---HHHHHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             cCc---HHHHHHHHHHhcCCCCEEEECCcccCCCCc
Confidence            666   455677778888999999999998765443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.95  E-value=8.2e-10  Score=91.90  Aligned_cols=91  Identities=18%  Similarity=0.187  Sum_probs=66.9

Q ss_pred             CCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc
Q 023896            5 TKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (275)
Q Consensus         5 ~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   68 (275)
                      +||+||||||                +|++|.++|+.|+.+|++|++++|+... .       ...  ..     .+|+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~-------~~~--~~-----~~~~~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-K-------PEP--HP-----NLSIR   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-C-------CCC--CT-----TEEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-c-------ccC--CC-----CeEEE
Confidence            5899999999                7889999999999999999999987631 0       000  00     12344


Q ss_pred             ChHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHH
Q 023896           69 DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELA  110 (275)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~  110 (275)
                      +.+++.++++.+.+.++++|++|+||++..+.+....+.+.+
T Consensus        67 ~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~  108 (232)
T 2gk4_A           67 EITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEV  108 (232)
T ss_dssp             ECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred             EHhHHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhh
Confidence            445677788888888999999999999877665543344443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.83  E-value=1.7e-08  Score=74.55  Aligned_cols=74  Identities=16%  Similarity=0.111  Sum_probs=60.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++++|+|+ |++|.++++.|.+.| ++|++++|+.++.+...    ..     .+..+.+|+.+.+++.++++     
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~~-----   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM-----GVATKQVDAKDEAGLAKALG-----   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT-----TCEEEECCTTCHHHHHHHTT-----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC-----CCcEEEecCCCHHHHHHHHc-----
Confidence            4678999999 999999999999999 89999999987765543    11     16678899999877666553     


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                        ++|++|++++
T Consensus        69 --~~d~vi~~~~   78 (118)
T 3ic5_A           69 --GFDAVISAAP   78 (118)
T ss_dssp             --TCSEEEECSC
T ss_pred             --CCCEEEECCC
Confidence              7899999985

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.75  E-value=6.2e-08  Score=87.70  Aligned_cols=83  Identities=17%  Similarity=0.234  Sum_probs=70.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC---CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g---~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++|+|+|| ||||+++++.|+++|   ..|++.+|+.++++...+++......  ++..+.+|+++.+++++++++.   
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~--~~~~~~~D~~d~~~l~~~l~~~---   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYG--EIDITTVDADSIEELVALINEV---   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCC--CCEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCC--ceEEEEecCCCHHHHHHHHHhh---
Confidence            47899999 899999999999998   48999999999999888887654322  2778899999999999998865   


Q ss_pred             cCCccEEEcCCccc
Q 023896           84 FGKLDILTKGDAEV   97 (275)
Q Consensus        84 ~g~id~li~~ag~~   97 (275)
                        ++|+|||+++..
T Consensus        76 --~~DvVin~ag~~   87 (405)
T 4ina_A           76 --KPQIVLNIALPY   87 (405)
T ss_dssp             --CCSEEEECSCGG
T ss_pred             --CCCEEEECCCcc
Confidence              699999999853

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.73  E-value=1.6e-10  Score=105.80  Aligned_cols=44  Identities=30%  Similarity=0.335  Sum_probs=39.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      ++.||+++|||++ +||+++++.|+..|++|+++++++.+.+...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4689999999997 9999999999999999999999987765544

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.68  E-value=1.8e-08  Score=79.25  Aligned_cols=79  Identities=16%  Similarity=0.219  Sum_probs=63.2

Q ss_pred             CCchhHHHHHHHHHCCCEEEEEecChhHHH---HHHHHHHhcCCCCCceeEEEecccCh--HHHHHHHHHHHhhcCCccE
Q 023896           15 NKGIGFETVRQLASKGITVVLTARDEKRGL---EAVEKLKASGVDPELLLFHQLDISDL--ASVSSLADFIKTQFGKLDI   89 (275)
Q Consensus        15 ~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~   89 (275)
                      ++.++.+.++.|++.|++|++..|+.....   ...+.+...+..   ...+++|++++  ++++++++.+.+.+|+ |+
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~---~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dV  100 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMD---YVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DV  100 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCE---EEECCCCTTSCCHHHHHHHHHHHHHTTTS-CE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCe---EEEecCCCCCCCHHHHHHHHHHHHhcCCC-CE
Confidence            356889999999999999999988765432   123444444433   77888999999  9999999999999999 99


Q ss_pred             EEcCCccc
Q 023896           90 LTKGDAEV   97 (275)
Q Consensus        90 li~~ag~~   97 (275)
                      ||||||..
T Consensus       101 LVnnAgg~  108 (157)
T 3gxh_A          101 LVHCLANY  108 (157)
T ss_dssp             EEECSBSH
T ss_pred             EEECCCCC
Confidence            99999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.60  E-value=1.2e-07  Score=83.33  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++|||||+||||..+++.+...|++|++++|+.++.+.. +++   +..      ..+|.++.+++.+.+.++..  
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~------~~~d~~~~~~~~~~~~~~~~--  212 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD------AAFNYKTVNSLEEALKKASP--  212 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS------EEEETTSCSCHHHHHHHHCT--
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc------EEEecCCHHHHHHHHHHHhC--
Confidence            579999999999999999999999999999999998776654 333   211      33588874555555555543  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|++|+|+|
T Consensus       213 ~~~d~vi~~~g  223 (333)
T 1v3u_A          213 DGYDCYFDNVG  223 (333)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCCeEEEECCC
Confidence            58999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.59  E-value=1.2e-07  Score=83.98  Aligned_cols=104  Identities=12%  Similarity=0.081  Sum_probs=76.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+||||..+++.+...|++|++++|+.++.+.. +++   +..      ..+|+++.+++.+.+.++... 
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~------~~~d~~~~~~~~~~~~~~~~~-  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE------VFIDFTKEKDIVGAVLKATDG-  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC------EEEETTTCSCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc------eEEecCccHhHHHHHHHHhCC-
Confidence            578999999999999999999999999999999988776433 222   211      235888666666666665543 


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                       ++|++|+++|...                         .++.+++.++  ++|+++++++..
T Consensus       238 -~~D~vi~~~g~~~-------------------------~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          238 -GAHGVINVSVSEA-------------------------AIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             -CEEEEEECSSCHH-------------------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred             -CCCEEEECCCcHH-------------------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence             7999999998311                         3455566664  357999998754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.55  E-value=2.1e-07  Score=75.44  Aligned_cols=103  Identities=14%  Similarity=0.171  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++||||||+||||.++++.+...|++|++++|+.++.+...    ..+..      ..+|.++.+..+.+.+... . 
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~------~~~d~~~~~~~~~~~~~~~-~-  105 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVE------YVGDSRSVDFADEILELTD-G-  105 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCS------EEEETTCSTHHHHHHHHTT-T-
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCC------EEeeCCcHHHHHHHHHHhC-C-
Confidence            5789999999999999999999999999999999987654432    22211      2357777655444433221 1 


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      +++|++|+|+|..                          .++.+++.++  ++|++|++++..
T Consensus       106 ~~~D~vi~~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          106 YGVDVVLNSLAGE--------------------------AIQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             CCEEEEEECCCTH--------------------------HHHHHHHTEE--EEEEEEECSCGG
T ss_pred             CCCeEEEECCchH--------------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            3699999998721                          0234455554  357999998854

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.55  E-value=2.2e-07  Score=83.01  Aligned_cols=107  Identities=13%  Similarity=0.140  Sum_probs=73.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.+++|+|+|+ |+||+.+++.+...|++|++++|+..+++...+.+   + .    . +.+|.++.+++.+++.     
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g-~----~-~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---G-G----R-VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---T-T----S-EEEEECCHHHHHHHHH-----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---C-c----e-EEEecCCHHHHHHHHh-----
Confidence            57899999999 99999999999999999999999998766553322   1 1    1 4567777777666553     


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                        ..|++|++++.....                   .++.+.+..++.|+  +++.||++++..+
T Consensus       229 --~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~mk--~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 --HADLLIGAVLVPGAK-------------------APKLVTRDMLSLMK--EGAVIVDVAVDQG  270 (369)
T ss_dssp             --HCSEEEECCC--------------------------CCSCHHHHTTSC--TTCEEEECC----
T ss_pred             --CCCEEEECCCCCccc-------------------cchhHHHHHHHhhc--CCCEEEEEecCCC
Confidence              689999999854210                   01223456667774  4689999998653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.54  E-value=1.1e-07  Score=87.13  Aligned_cols=78  Identities=18%  Similarity=0.146  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++++...+.+    .   .+..+.+|+++.+++.++++      
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~---~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q---HSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----T---TEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----C---CceEEEeecCCHHHHHHHHc------
Confidence            468899998 799999999999999999999999987655443221    1   16678899999888766653      


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                       ++|+|||+++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             799999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.53  E-value=2.7e-08  Score=92.98  Aligned_cols=98  Identities=19%  Similarity=0.217  Sum_probs=67.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++++..++++.   ..   +.    ++.+   +        +
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~---~~----~~~d---l--------~  418 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GK---AL----SLTD---L--------D  418 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C----CE----ETTT---T--------T
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Cc---ee----eHHH---h--------h
Confidence            356889999999 599999999999999999999999988877766552   11   21    2222   1        1


Q ss_pred             hc--CCccEEEcCCccccc-----chhhccchhHHHHhHHhhcccHH
Q 023896           83 QF--GKLDILTKGDAEVDW-----SKVCYQTYELAVECLKTNYYGTK  122 (275)
Q Consensus        83 ~~--g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~N~~~~~  122 (275)
                      .+  +.+|++|||+|....     .++...+.+.+...+++|+.+..
T Consensus       419 ~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          419 NYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             TC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             hccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            22  358999999986432     23444566778889999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.52  E-value=6.6e-08  Score=83.45  Aligned_cols=81  Identities=14%  Similarity=0.213  Sum_probs=60.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++...+++.......  . .+.+|+.+.          .+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~--~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK--F-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC--H-HHHEEEECT----------TC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc--c-ceeEEEeeH----------HH
Confidence            4578999999997 99999999999999 99999999988888877765421100  0 123455542          34


Q ss_pred             hcCCccEEEcCCcccc
Q 023896           83 QFGKLDILTKGDAEVD   98 (275)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (275)
                      .++++|++|||+|...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            5678999999998643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.45  E-value=2.7e-07  Score=84.83  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=62.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++++++|+|+ ||+|++++..|++. |++|++++|+.++++...+.   .  .   +..+.+|+.+.+++.++++   
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~---~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--G---SKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--T---CEEEECCTTCHHHHHHHHH---
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--C---CcEEEEecCCHHHHHHHHc---
Confidence            456789999998 99999999999998 78999999998877665432   1  1   5567889999887766654   


Q ss_pred             hhcCCccEEEcCCccc
Q 023896           82 TQFGKLDILTKGDAEV   97 (275)
Q Consensus        82 ~~~g~id~li~~ag~~   97 (275)
                          ++|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                689999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.41  E-value=2e-06  Score=74.91  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=62.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC---hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ++++|++||+|+ ||+|++++..|++.|+ +|++++|+   .+++++.++++.....    +.+...++.+.+++.+.+.
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~----~~~~~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD----CKAQLFDIEDHEQLRKEIA  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC----CceEEeccchHHHHHhhhc
Confidence            357899999998 7999999999999998 89999999   8888888887765432    2334456666555444333


Q ss_pred             HHHhhcCCccEEEcCCc
Q 023896           79 FIKTQFGKLDILTKGDA   95 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag   95 (275)
                             ..|+|||+..
T Consensus       226 -------~aDiIINaTp  235 (315)
T 3tnl_A          226 -------ESVIFTNATG  235 (315)
T ss_dssp             -------TCSEEEECSS
T ss_pred             -------CCCEEEECcc
Confidence                   6899999764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.40  E-value=8.5e-07  Score=67.83  Aligned_cols=79  Identities=20%  Similarity=0.218  Sum_probs=58.6

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |..++.++++|+|+ |.+|..+++.|.++|++|+++++++++.+...+    .+     ..++..|.++++.+.++    
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~-----~~~~~gd~~~~~~l~~~----   66 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG-----FDAVIADPTDESFYRSL----   66 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEECCTTCHHHHHHS----
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC-----CcEEECCCCCHHHHHhC----
Confidence            44455678999998 779999999999999999999999987655432    21     56788999998775543    


Q ss_pred             HhhcCCccEEEcCCc
Q 023896           81 KTQFGKLDILTKGDA   95 (275)
Q Consensus        81 ~~~~g~id~li~~ag   95 (275)
                        ...+.|++|.+.+
T Consensus        67 --~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 --DLEGVSAVLITGS   79 (141)
T ss_dssp             --CCTTCSEEEECCS
T ss_pred             --CcccCCEEEEecC
Confidence              2247899988766

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.38  E-value=2.4e-07  Score=70.73  Aligned_cols=80  Identities=15%  Similarity=0.110  Sum_probs=56.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.++++++++|+|+ |++|..+++.|.+.|++|++++|+.++.+..    ...+     ...+..|.++.+.+.++    
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~-----~~~~~~d~~~~~~l~~~----   66 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA-----THAVIANATEENELLSL----   66 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC-----SEEEECCTTCHHHHHTT----
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC-----CEEEEeCCCCHHHHHhc----
Confidence            66777888999998 9999999999999999999999988654332    1111     34567888876544322    


Q ss_pred             HhhcCCccEEEcCCcc
Q 023896           81 KTQFGKLDILTKGDAE   96 (275)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (275)
                        ...+.|++|++++.
T Consensus        67 --~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 --GIRNFEYVIVAIGA   80 (144)
T ss_dssp             --TGGGCSEEEECCCS
T ss_pred             --CCCCCCEEEECCCC
Confidence              23478999998874

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.38  E-value=1.1e-06  Score=77.23  Aligned_cols=121  Identities=13%  Similarity=0.051  Sum_probs=82.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecC----hhHHHHHHHHHHhcCCCCCceeEEEecccChHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARD----EKRGLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v   73 (275)
                      +.++++||||+|++|..++..|+..|.       +|++.+++    .++++..+.++......   +   ..|+....+.
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~---~---~~~i~~~~~~   77 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP---L---LAGMTAHADP   77 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT---T---EEEEEEESSH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc---c---cCcEEEecCc
Confidence            346899999999999999999999885       79999998    65565555566542111   1   1345444443


Q ss_pred             HHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           74 SSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                      .+.+       ...|++|+.||.....   ..+   ..+.+..|+-.+..+++.+..+-  .+.+++|++|.-
T Consensus        78 ~~al-------~~aD~Vi~~ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNP  135 (329)
T 1b8p_A           78 MTAF-------KDADVALLVGARPRGP---GME---RKDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNP  135 (329)
T ss_dssp             HHHT-------TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSS
T ss_pred             HHHh-------CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCc
Confidence            3333       3789999999864322   122   33567889988888888876642  145688888873

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.33  E-value=7.7e-07  Score=78.46  Aligned_cols=81  Identities=14%  Similarity=0.108  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+||||..+++.+...|++|++++|+.++.+.+.+++   +..      ..+|.++.+++.+.++++..  
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~------~~~d~~~~~~~~~~~~~~~~--  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFD------DAFNYKEESDLTAALKRCFP--  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCS------EEEETTSCSCSHHHHHHHCT--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc------eEEecCCHHHHHHHHHHHhC--
Confidence            4789999999999999999999999999999999987765543222   211      23477765555555554432  


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|++++++|.
T Consensus       224 ~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 NGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCcEEEECCCH
Confidence            479999999873

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.33  E-value=1.4e-06  Score=76.35  Aligned_cols=104  Identities=13%  Similarity=0.165  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++||||||+||||..+++.+...|++|++++|+.++.+...+ +   +..      ..+|.++++..+.+.+....  
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~------~~~~~~~~~~~~~~~~~~~~--  207 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAW------QVINYREEDLVERLKEITGG--  207 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS------EEEETTTSCHHHHHHHHTTT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC------EEEECCCccHHHHHHHHhCC--
Confidence            47899999999999999999999999999999999877655433 2   211      23577776655444432211  


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      .++|++|+|+|.  .      .                  ++..++.++  ++|+++.+++..+
T Consensus       208 ~~~D~vi~~~g~--~------~------------------~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          208 KKVRVVYDSVGR--D------T------------------WERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             CCEEEEEECSCG--G------G------------------HHHHHHTEE--EEEEEEECCCTTC
T ss_pred             CCceEEEECCch--H------H------------------HHHHHHHhc--CCCEEEEEecCCC
Confidence            369999999982  1      0                  234445554  3579999988654

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.32  E-value=2e-06  Score=75.49  Aligned_cols=80  Identities=20%  Similarity=0.285  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++||+||+||||.++++.+...|++|++++|+.++.+... ++   +..      ..+|.++.+..+.+.+....  
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~------~~~d~~~~~~~~~i~~~~~~--  212 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCH------HTINYSTQDFAEVVREITGG--  212 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTTSCHHHHHHHHHTT--
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC------EEEECCCHHHHHHHHHHhCC--
Confidence            4789999999999999999999999999999999987766543 23   211      23577776554444433211  


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|++|+|+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1wly_A          213 KGVDVVYDSIGK  224 (333)
T ss_dssp             CCEEEEEECSCT
T ss_pred             CCCeEEEECCcH
Confidence            369999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.27  E-value=2.6e-06  Score=75.48  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+||||..+++.+...|++|++++|+.++.+.. +++   +..      ..+|.++.+..+.+.+.. . -
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~~~~-~-~  229 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA------AGFNYKKEDFSEATLKFT-K-G  229 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS------EEEETTTSCHHHHHHHHT-T-T
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc------EEEecCChHHHHHHHHHh-c-C
Confidence            478999999999999999999999999999999998876655 333   211      235777655444433322 1 1


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|++|+|+|.
T Consensus       230 ~~~d~vi~~~G~  241 (354)
T 2j8z_A          230 AGVNLILDCIGG  241 (354)
T ss_dssp             SCEEEEEESSCG
T ss_pred             CCceEEEECCCc
Confidence            369999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.25  E-value=1.8e-06  Score=76.54  Aligned_cols=77  Identities=16%  Similarity=0.099  Sum_probs=56.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++|||+||+||||..+++.+...|+ +|++++++.++.+...+++   +..      ..+|.++.+..+. +.+...  +
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~------~~~d~~~~~~~~~-~~~~~~--~  229 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD------AAINYKKDNVAEQ-LRESCP--A  229 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS------EEEETTTSCHHHH-HHHHCT--T
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc------eEEecCchHHHHH-HHHhcC--C
Confidence            8999999999999999999999999 9999999987665543322   211      2357776443333 333322  2


Q ss_pred             CccEEEcCCc
Q 023896           86 KLDILTKGDA   95 (275)
Q Consensus        86 ~id~li~~ag   95 (275)
                      ++|++|+|+|
T Consensus       230 ~~d~vi~~~G  239 (357)
T 2zb4_A          230 GVDVYFDNVG  239 (357)
T ss_dssp             CEEEEEESCC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=3.4e-06  Score=74.73  Aligned_cols=80  Identities=15%  Similarity=0.265  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+||||..+++.+...|++|++++|+.++.+.. +++   +..      ..+|.++.+..+++.+.. . .
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~------~~~d~~~~~~~~~~~~~~-~-~  237 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAH------EVFNHREVNYIDKIKKYV-G-E  237 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS------EEEETTSTTHHHHHHHHH-C-T
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---CCC------EEEeCCCchHHHHHHHHc-C-C
Confidence            478999999999999999999999999999999998876633 222   211      235777655444433322 1 1


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|++|+|+|.
T Consensus       238 ~~~D~vi~~~G~  249 (351)
T 1yb5_A          238 KGIDIIIEMLAN  249 (351)
T ss_dssp             TCEEEEEESCHH
T ss_pred             CCcEEEEECCCh
Confidence            279999999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.24  E-value=2.4e-06  Score=75.04  Aligned_cols=103  Identities=17%  Similarity=0.171  Sum_probs=71.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+||||..+++.+...|++|++++|+.++.+.+.+++   +..      ..+|.++.+..+.+.+ ..  .
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~------~~~~~~~~~~~~~~~~-~~--~  216 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFD------GAIDYKNEDLAAGLKR-EC--P  216 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCS------EEEETTTSCHHHHHHH-HC--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCC------EEEECCCHHHHHHHHH-hc--C
Confidence            4799999999999999999999999999999999998766553332   211      2357766554333332 22  2


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      +++|++++|+|..                          .++.+++.++  ++|+++.++...
T Consensus       217 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~--~~G~iv~~G~~~  251 (336)
T 4b7c_A          217 KGIDVFFDNVGGE--------------------------ILDTVLTRIA--FKARIVLCGAIS  251 (336)
T ss_dssp             TCEEEEEESSCHH--------------------------HHHHHHTTEE--EEEEEEECCCGG
T ss_pred             CCceEEEECCCcc--------------------------hHHHHHHHHh--hCCEEEEEeecc
Confidence            4799999999831                          1233445554  358999988755

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.24  E-value=2.2e-06  Score=73.20  Aligned_cols=77  Identities=16%  Similarity=0.202  Sum_probs=57.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++...+++.... .   +.  ..|+   +++       .+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~---~~--~~~~---~~~-------~~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-S---IQ--ALSM---DEL-------EG  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-S---EE--ECCS---GGG-------TT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-C---ee--EecH---HHh-------cc
Confidence            357899999998 799999999999999999999999998888776654321 1   21  1232   221       11


Q ss_pred             hcCCccEEEcCCcccc
Q 023896           83 QFGKLDILTKGDAEVD   98 (275)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (275)
                        +++|+|||+++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              68999999998643

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.13  E-value=9e-06  Score=74.25  Aligned_cols=110  Identities=17%  Similarity=0.252  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEE--Eeccc---------ChHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH--QLDIS---------DLASV   73 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~~Dl~---------~~~~v   73 (275)
                      .|++|||+||+|+||..++..+...|++|++++++.++.+.+ +++   +..   ..+.  ..|+.         +.+++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~---~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCD---LVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCC---CEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCC---EEEecccccccccccccccccchhh
Confidence            479999999999999999999989999999999988776654 222   221   1111  11221         12344


Q ss_pred             HHHHHHHHhhcC-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           74 SSLADFIKTQFG-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        74 ~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      ..+.+++.+..+ ++|++++++|...                          ++..++.++  ++|+++++++..+.
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G~~~--------------------------~~~~~~~l~--~~G~iv~~G~~~~~  341 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTGRVT--------------------------FGLSVIVAR--RGGTVVTCGSSSGY  341 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSCHHH--------------------------HHHHHHHSC--TTCEEEESCCTTCS
T ss_pred             hHHHHHHHHHhCCCceEEEECCCchH--------------------------HHHHHHHHh--cCCEEEEEecCCCc
Confidence            555666666555 6999999998410                          133444443  46899999886553

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.12  E-value=9.7e-06  Score=69.64  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=58.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.+++++.++++......   +.+...++   +++.+.+.   
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~---~~i~~~~~---~~l~~~l~---  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR---EAVVGVDA---RGIEDVIA---  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS---CCEEEECS---TTHHHHHH---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC---ceEEEcCH---HHHHHHHh---
Confidence            467899999998 8999999999999998 7999999999999888887654222   22333333   23333332   


Q ss_pred             hhcCCccEEEcCCc
Q 023896           82 TQFGKLDILTKGDA   95 (275)
Q Consensus        82 ~~~g~id~li~~ag   95 (275)
                          ..|+|||+..
T Consensus       194 ----~~DiVInaTp  203 (283)
T 3jyo_A          194 ----AADGVVNATP  203 (283)
T ss_dssp             ----HSSEEEECSS
T ss_pred             ----cCCEEEECCC
Confidence                5799999764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.12  E-value=8.7e-06  Score=71.82  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++|||+|++||||..+++.+... |++|++++++.++.+.. +++   +..      ..+|.++.+..+.+ .++...
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~-~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GAD------YVINASMQDPLAEI-RRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCS------EEEETTTSCHHHHH-HHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC------EEecCCCccHHHHH-HHHhcC
Confidence            5789999999999999999999998 99999999998876654 333   211      23466665443332 222221


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|++++++|.
T Consensus       239 -~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 -KGVDAVIDLNNS  250 (347)
T ss_dssp             -SCEEEEEESCCC
T ss_pred             -CCceEEEECCCC
Confidence             589999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.10  E-value=2.1e-05  Score=68.43  Aligned_cols=82  Identities=21%  Similarity=0.263  Sum_probs=59.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC---hhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ++++|++||+|+ ||.|++++..|++.|+ +|+++.|+   .++++++++++.....    ..+...++.+.+...+.+.
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~----~~v~~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD----CVVTVTDLADQHAFTEALA  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC----cceEEechHhhhhhHhhcc
Confidence            357899999998 8999999999999998 89999999   8888888877765432    2233445555432222222


Q ss_pred             HHHhhcCCccEEEcCCcc
Q 023896           79 FIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (275)
                             ..|+|||+...
T Consensus       220 -------~~DiIINaTp~  230 (312)
T 3t4e_A          220 -------SADILTNGTKV  230 (312)
T ss_dssp             -------HCSEEEECSST
T ss_pred             -------CceEEEECCcC
Confidence                   57999997643

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.06  E-value=1.1e-05  Score=71.66  Aligned_cols=99  Identities=19%  Similarity=0.174  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh---hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +|++|||+|+ |+||..+++.+...|++|++++++.   ++.+.. +++   +     ...+  | .+  ++.+.+.+ .
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---g-----a~~v--~-~~--~~~~~~~~-~  243 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---K-----TNYY--N-SS--NGYDKLKD-S  243 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---T-----CEEE--E-CT--TCSHHHHH-H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---C-----Ccee--c-hH--HHHHHHHH-h
Confidence            4899999999 9999999999988999999999988   665433 333   2     2222  5 44  22222222 2


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHH-HHHhhhhhcCCCCeEEEEecCcc
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                       . +++|++++++|...                         .+ +.+++.++  ++|++++++...+
T Consensus       244 -~-~~~d~vid~~g~~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~~~  282 (366)
T 2cdc_A          244 -V-GKFDVIIDATGADV-------------------------NILGNVIPLLG--RNGVLGLFGFSTS  282 (366)
T ss_dssp             -H-CCEEEEEECCCCCT-------------------------HHHHHHGGGEE--EEEEEEECSCCCS
T ss_pred             -C-CCCCEEEECCCChH-------------------------HHHHHHHHHHh--cCCEEEEEecCCC
Confidence             2 58999999998421                         12 45566664  3579999887543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.03  E-value=4.4e-05  Score=67.31  Aligned_cols=104  Identities=13%  Similarity=0.139  Sum_probs=69.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++++||+||+|+||..++..+...|++|++++++.++.+.+. ++   +..      ..+|..+.+-.+.+.+....  .
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~------~~~~~~~~~~~~~v~~~~~~--~  232 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAA------HVLNEKAPDFEATLREVMKA--E  232 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCS------EEEETTSTTHHHHHHHHHHH--H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC------EEEECCcHHHHHHHHHHhcC--C
Confidence            489999999999999999988889999999999998866553 33   211      23466554433333332221  2


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      ++|++++++|...                          ++.+++.++  ++|+++++++..+.
T Consensus       233 g~D~vid~~g~~~--------------------------~~~~~~~l~--~~G~iv~~G~~~~~  268 (349)
T 3pi7_A          233 QPRIFLDAVTGPL--------------------------ASAIFNAMP--KRARWIIYGRLDPD  268 (349)
T ss_dssp             CCCEEEESSCHHH--------------------------HHHHHHHSC--TTCEEEECCCSCCS
T ss_pred             CCcEEEECCCChh--------------------------HHHHHhhhc--CCCEEEEEeccCCC
Confidence            7999999988420                          122344443  46899999875543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.02  E-value=2.1e-05  Score=69.60  Aligned_cols=79  Identities=15%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+|+||..+++.+...|++|++++++.++.+.+. ++   +..      ..+|.++.+..+.+.+ ..  .
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~------~~~~~~~~~~~~~~~~-~~--~  233 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL---GAK------RGINYRSEDFAAVIKA-ET--G  233 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTTSCHHHHHHH-HH--S
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCC------EEEeCCchHHHHHHHH-Hh--C
Confidence            4789999999999999999999999999999999998776543 23   211      2356666554444333 32  3


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|++++++|.
T Consensus       234 ~g~Dvvid~~g~  245 (353)
T 4dup_A          234 QGVDIILDMIGA  245 (353)
T ss_dssp             SCEEEEEESCCG
T ss_pred             CCceEEEECCCH
Confidence            479999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.01  E-value=4.6e-05  Score=66.76  Aligned_cols=105  Identities=11%  Similarity=0.062  Sum_probs=66.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .++++||||+|.+|..++..|+.+|  .+|++.+++..  +....++...... ..+..    +.+..+..+.+      
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~-~~v~~----~~~t~d~~~al------   74 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTG-AVVRG----FLGQQQLEAAL------   74 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSS-CEEEE----EESHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccccc-ceEEE----EeCCCCHHHHc------
Confidence            3579999999999999999999998  78999998876  3333344432211 01211    22333433333      


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                       ...|++|+.+|......   .+..   +.+..|+-.+..+++.+..
T Consensus        75 -~gaDvVi~~ag~~~~~g---~~r~---dl~~~N~~~~~~i~~~i~~  114 (326)
T 1smk_A           75 -TGMDLIIVPAGVPRKPG---MTRD---DLFKINAGIVKTLCEGIAK  114 (326)
T ss_dssp             -TTCSEEEECCCCCCCSS---CCCS---HHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEEcCCcCCCCC---CCHH---HHHHHHHHHHHHHHHHHHh
Confidence             37899999998643221   1222   3366777777777776654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.01  E-value=1.5e-05  Score=69.81  Aligned_cols=105  Identities=14%  Similarity=0.168  Sum_probs=70.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|++++++.++.+.. +++   +..      ..+|..+.+..+.+.+ ... -
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~------~~~~~~~~~~~~~~~~-~~~-~  215 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---GAE------YLINASKEDILRQVLK-FTN-G  215 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS------EEEETTTSCHHHHHHH-HTT-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCc------EEEeCCCchHHHHHHH-HhC-C
Confidence            578999999999999999999999999999999998876643 322   211      2346665544333332 211 1


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      .++|++++++|..                          .++.++..++  ++|+++.++...+.
T Consensus       216 ~g~D~vid~~g~~--------------------------~~~~~~~~l~--~~G~iv~~G~~~~~  252 (334)
T 3qwb_A          216 KGVDASFDSVGKD--------------------------TFEISLAALK--RKGVFVSFGNASGL  252 (334)
T ss_dssp             SCEEEEEECCGGG--------------------------GHHHHHHHEE--EEEEEEECCCTTCC
T ss_pred             CCceEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCCCCC
Confidence            2699999999841                          1223344443  45899999875543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.98  E-value=1.7e-05  Score=70.97  Aligned_cols=106  Identities=13%  Similarity=0.125  Sum_probs=70.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+.+++|+|+|+ |+||..+++.+...|++|++++|+..+++...+.+.   ..   +   ..+..+..++.+++.    
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g---~~---~---~~~~~~~~~l~~~l~----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC---GR---I---HTRYSSAYELEGAVK----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT---TS---S---EEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC---Ce---e---EeccCCHHHHHHHHc----
Confidence            467899999998 999999999999999999999999987665543221   11   1   233444455444432    


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                         ..|++|++++.....     ++              ..+.+..++.|+  +++.||++++.
T Consensus       231 ---~aDvVi~~~~~p~~~-----t~--------------~li~~~~l~~mk--~g~~iV~va~~  270 (377)
T 2vhw_A          231 ---RADLVIGAVLVPGAK-----AP--------------KLVSNSLVAHMK--PGAVLVDIAID  270 (377)
T ss_dssp             ---HCSEEEECCCCTTSC-----CC--------------CCBCHHHHTTSC--TTCEEEEGGGG
T ss_pred             ---CCCEEEECCCcCCCC-----Cc--------------ceecHHHHhcCC--CCcEEEEEecC
Confidence               689999988743210     11              112344556664  45799999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.97  E-value=2.9e-05  Score=68.35  Aligned_cols=104  Identities=14%  Similarity=0.139  Sum_probs=70.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++||+||+|+||..+++.+...|++|++++|+.++.+... ++   +..      ..+|.++++- .+.+.+... .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~------~~~d~~~~~~-~~~~~~~~~-~  233 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GAD------ETVNYTHPDW-PKEVRRLTG-G  233 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTSTTH-HHHHHHHTT-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCC------EEEcCCcccH-HHHHHHHhC-C
Confidence            4789999999999999999999999999999999988766553 33   211      1257776543 222222221 1


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      .++|++|+++| ...                         ++.+++.++  +.|+++.+++..+
T Consensus       234 ~~~d~vi~~~g-~~~-------------------------~~~~~~~l~--~~G~~v~~g~~~~  269 (343)
T 2eih_A          234 KGADKVVDHTG-ALY-------------------------FEGVIKATA--NGGRIAIAGASSG  269 (343)
T ss_dssp             TCEEEEEESSC-SSS-------------------------HHHHHHHEE--EEEEEEESSCCCS
T ss_pred             CCceEEEECCC-HHH-------------------------HHHHHHhhc--cCCEEEEEecCCC
Confidence            37999999998 210                         233444454  3579999887654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.95  E-value=2.2e-05  Score=66.97  Aligned_cols=77  Identities=14%  Similarity=0.225  Sum_probs=56.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++.... .   +.  ..|+.   ++.       +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~---~~--~~~~~---~~~-------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-N---IQ--AVSMD---SIP-------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-C---EE--EEEGG---GCC-------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-C---eE--EeeHH---Hhc-------c
Confidence            357899999998 799999999999999999999999998888877765321 1   22  23331   110       1


Q ss_pred             hcCCccEEEcCCcccc
Q 023896           83 QFGKLDILTKGDAEVD   98 (275)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (275)
                        +..|+|||+++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              47999999987643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.93  E-value=2.3e-05  Score=68.50  Aligned_cols=105  Identities=12%  Similarity=0.126  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..+++.+...|++|++++++.++.+... ++   +..      ..+|.++.+..+.+.+.. . -
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~------~~~~~~~~~~~~~~~~~~-~-~  207 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAW------ETIDYSHEDVAKRVLELT-D-G  207 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTTSCHHHHHHHHT-T-T
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC------EEEeCCCccHHHHHHHHh-C-C
Confidence            4789999999999999999999889999999999988766543 33   211      234666655433333222 1 1


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      .++|++++++|..                          .++..++.++  ++|+++.++...+.
T Consensus       208 ~g~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~iv~~g~~~~~  244 (325)
T 3jyn_A          208 KKCPVVYDGVGQD--------------------------TWLTSLDSVA--PRGLVVSFGNASGP  244 (325)
T ss_dssp             CCEEEEEESSCGG--------------------------GHHHHHTTEE--EEEEEEECCCTTCC
T ss_pred             CCceEEEECCChH--------------------------HHHHHHHHhc--CCCEEEEEecCCCC
Confidence            2799999999841                          1123344453  35899999876544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.90  E-value=5.6e-05  Score=58.44  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .++.++|.|+ |.+|..+++.|.+.|++|++++++. ++.+...+... .+     +.++..|.++++.+.++      .
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~-----~~~i~gd~~~~~~l~~a------~   68 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DN-----ADVIPGDSNDSSVLKKA------G   68 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TT-----CEEEESCTTSHHHHHHH------T
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CC-----CeEEEcCCCCHHHHHHc------C
Confidence            4567888986 9999999999999999999999984 44444333221 11     67788999988765443      1


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                      ..+.|.+|...+
T Consensus        69 i~~ad~vi~~~~   80 (153)
T 1id1_A           69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             hhhCCEEEEecC
Confidence            236788888765

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.89  E-value=2.9e-05  Score=68.21  Aligned_cols=80  Identities=14%  Similarity=0.130  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|++++++.++.+.+.+ +   +..      ..+|..+.+..+.+.+ ... -
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~------~~~~~~~~~~~~~~~~-~~~-~  211 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAA------YVIDTSTAPLYETVME-LTN-G  211 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCS------EEEETTTSCHHHHHHH-HTT-T
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCc------EEEeCCcccHHHHHHH-HhC-C
Confidence            47899999999999999999888899999999999887665533 3   211      2346665544333322 211 1


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|++++++|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            279999999984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.81  E-value=0.00016  Score=62.91  Aligned_cols=107  Identities=13%  Similarity=0.037  Sum_probs=67.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEec--ChhHHHHHHHHHHhcCCCCCceeEEEecccChH-HHHHHHHHHHh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLDISDLA-SVSSLADFIKT   82 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r--~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~   82 (275)
                      +++||||+|++|..++..|+..|.  ++.+.++  +.++++....++.....    .....+++.+.+ ++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~----~~~~~~~i~~~~d~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA----GTRSDANIYVESDENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT----TSCCCCEEEEEETTCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH----hcCCCeEEEeCCcchH-------H
Confidence            689999999999999999998885  6888998  76555543444432110    000011222211 111       1


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  131 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  131 (275)
                      .+...|++|+.||.....   ..+   ..+.+..|+-.+..+++++..+
T Consensus        71 al~gaD~Vi~~Ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~  113 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE---GMS---RMDLAKTNAKIVGKYAKKIAEI  113 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC---CCc---HHHHHHHHHHHHHHHHHHHHHh
Confidence            234799999999864322   122   2355889999999988888664

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00022  Score=61.79  Aligned_cols=104  Identities=13%  Similarity=0.024  Sum_probs=67.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEec--ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r--~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +++||||+|.+|..++..|+..|.  ++++.++  +.++++....++.........+.+.. +  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            689999999999999999998875  6889999  77665544444443210001133322 1  111           1


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhh
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  131 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  131 (275)
                      +...|++|+.||.....   ..+.   .+.+..|+-.+..+++.+..+
T Consensus        68 ~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~  109 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP---GQTR---IDLAGDNAPIMEDIQSSLDEH  109 (303)
T ss_dssp             GTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred             hCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence            23789999999864322   1222   345788888888888877653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.79  E-value=7.5e-05  Score=56.25  Aligned_cols=75  Identities=17%  Similarity=0.286  Sum_probs=54.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+++..+...+.   .+     +..+..|.++.+.+.+      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~-----~~~~~~d~~~~~~l~~------~~~~   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID-----ALVINGDCTKIKTLED------AGIE   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS-----SEEEESCTTSHHHHHH------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC-----cEEEEcCCCCHHHHHH------cCcc
Confidence            467899987 9999999999999999999999998765544321   11     4456778877655322      1234


Q ss_pred             CccEEEcCCc
Q 023896           86 KLDILTKGDA   95 (275)
Q Consensus        86 ~id~li~~ag   95 (275)
                      +.|+++.+.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            7899999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.79  E-value=5e-05  Score=67.51  Aligned_cols=73  Identities=11%  Similarity=0.163  Sum_probs=57.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .++|+|.|| |++|+.+++.|++ .++|.+.+|+.++++...+          ....+.+|+.|.+++.++++       
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~----------~~~~~~~d~~d~~~l~~~~~-------   76 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE----------FATPLKVDASNFDKLVEVMK-------   76 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT----------TSEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc----------cCCcEEEecCCHHHHHHHHh-------
Confidence            356999998 9999999998865 5899999999987665421          15567899999988777765       


Q ss_pred             CccEEEcCCccc
Q 023896           86 KLDILTKGDAEV   97 (275)
Q Consensus        86 ~id~li~~ag~~   97 (275)
                      +.|+||++++..
T Consensus        77 ~~DvVi~~~p~~   88 (365)
T 3abi_A           77 EFELVIGALPGF   88 (365)
T ss_dssp             TCSEEEECCCGG
T ss_pred             CCCEEEEecCCc
Confidence            679999988653

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.76  E-value=7.9e-05  Score=65.52  Aligned_cols=77  Identities=16%  Similarity=0.253  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|++++++.++.+.+. ++   +..    .  ..|..  +++.   +++.+..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~----~--v~~~~--~~~~---~~v~~~~  223 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GAD----I--VLPLE--EGWA---KAVREAT  223 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS----E--EEESS--TTHH---HHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCc----E--EecCc--hhHH---HHHHHHh
Confidence            4789999999999999999999999999999999988765443 33   211    1  23444  2222   2333332


Q ss_pred             C--CccEEEcCCcc
Q 023896           85 G--KLDILTKGDAE   96 (275)
Q Consensus        85 g--~id~li~~ag~   96 (275)
                      +  ++|++++++|.
T Consensus       224 ~~~g~Dvvid~~g~  237 (342)
T 4eye_A          224 GGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTSCEEEEEESCC-
T ss_pred             CCCCceEEEECCch
Confidence            2  69999999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.73  E-value=5e-05  Score=67.47  Aligned_cols=75  Identities=21%  Similarity=0.266  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+|+ |+||..+++.+...|++|++++++.++.+...+++   +..      ..+|..+.+.+.       +..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~------~v~~~~~~~~~~-------~~~  249 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GAD------SFLVSRDQEQMQ-------AAA  249 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCS------EEEETTCHHHHH-------HTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCc------eEEeccCHHHHH-------Hhh
Confidence            5789999996 99999999998889999999999988766543322   211      224666543322       222


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +.+|++++++|.
T Consensus       250 ~~~D~vid~~g~  261 (366)
T 1yqd_A          250 GTLDGIIDTVSA  261 (366)
T ss_dssp             TCEEEEEECCSS
T ss_pred             CCCCEEEECCCc
Confidence            579999999885

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.71  E-value=0.00013  Score=64.63  Aligned_cols=78  Identities=14%  Similarity=0.126  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+||+|+||..+++.+...|++|++++++.++.+.+.+    .+..      ..+|..+.+ +.+.+.+..  -
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~------~~~~~~~~~-~~~~~~~~~--~  229 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD------RPINYKTEP-VGTVLKQEY--P  229 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS------EEEETTTSC-HHHHHHHHC--T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc------EEEecCChh-HHHHHHHhc--C
Confidence            47899999999999999999999999999999999877655432    2211      123555433 333333322  1


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|++++++|
T Consensus       230 ~g~D~vid~~g  240 (362)
T 2c0c_A          230 EGVDVVYESVG  240 (362)
T ss_dssp             TCEEEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            37999999988

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=7.5e-05  Score=64.54  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=55.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+++++.....     .+  .++   ++       +.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-----~~--~~~---~~-------~~  199 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-----AY--FSL---AE-------AE  199 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-----CE--ECH---HH-------HH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-----ce--eeH---HH-------HH
Confidence            457899999998 7999999999999998 999999999888777665432110     11  121   22       22


Q ss_pred             hhcCCccEEEcCCccc
Q 023896           82 TQFGKLDILTKGDAEV   97 (275)
Q Consensus        82 ~~~g~id~li~~ag~~   97 (275)
                      +.....|+||++.+..
T Consensus       200 ~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          200 TRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HTGGGCSEEEECSCTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            2335799999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.69  E-value=0.00021  Score=63.42  Aligned_cols=77  Identities=14%  Similarity=0.097  Sum_probs=55.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.+++|+|+|+ |++|+++++.+...|++|++++|+.++++...+.....      +..   +..+.+++.+.+      
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~------~~~---~~~~~~~~~~~~------  228 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------VEL---LYSNSAEIETAV------  228 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------SEE---EECCHHHHHHHH------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce------eEe---eeCCHHHHHHHH------
Confidence            45689999999 99999999999999999999999998877665433211      211   222333333322      


Q ss_pred             cCCccEEEcCCccc
Q 023896           84 FGKLDILTKGDAEV   97 (275)
Q Consensus        84 ~g~id~li~~ag~~   97 (275)
                       ...|++|++++..
T Consensus       229 -~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 -AEADLLIGAVLVP  241 (361)
T ss_dssp             -HTCSEEEECCCCT
T ss_pred             -cCCCEEEECCCcC
Confidence             2689999998753

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.68  E-value=0.00015  Score=62.03  Aligned_cols=74  Identities=14%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.+++++.++++...+ .   +...  ++.+..          
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~---~~~~--~~~~l~----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-E---VKAQ--AFEQLK----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-C---EEEE--EGGGCC----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-C---eeEe--eHHHhc----------
Confidence            357899999998 7999999999999996 99999999999988888876532 1   3332  222110          


Q ss_pred             hhcCCccEEEcCCcc
Q 023896           82 TQFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~~~g~id~li~~ag~   96 (275)
                         ...|+|||+...
T Consensus       186 ---~~aDiIInaTp~  197 (281)
T 3o8q_A          186 ---QSYDVIINSTSA  197 (281)
T ss_dssp             ---SCEEEEEECSCC
T ss_pred             ---CCCCEEEEcCcC
Confidence               378999997643

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.63  E-value=0.00025  Score=63.10  Aligned_cols=76  Identities=17%  Similarity=0.264  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|+.+++ .++.+.+ +++   +..      ..+|..+.+-.    +++.+ .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l---Ga~------~v~~~~~~~~~----~~~~~-~  246 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL---GAD------DVIDYKSGSVE----EQLKS-L  246 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT---TCS------EEEETTSSCHH----HHHHT-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc---CCC------EEEECCchHHH----HHHhh-c
Confidence            5789999999999999999888889999998884 4444332 322   211      22455554332    22322 2


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|+++.++|.
T Consensus       247 ~g~D~vid~~g~  258 (375)
T 2vn8_A          247 KPFDFILDNVGG  258 (375)
T ss_dssp             CCBSEEEESSCT
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.63  E-value=0.00031  Score=61.55  Aligned_cols=102  Identities=12%  Similarity=0.098  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++|||+|+ |+||..+++.+...|++|+.++|+.++.+.+. +   .+..      ..+|.++.+- .+.+.++.   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~------~~~d~~~~~~-~~~~~~~~---  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGAD------LVVNPLKEDA-AKFMKEKV---  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCS------EEECTTTSCH-HHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCC------EEecCCCccH-HHHHHHHh---
Confidence            4789999999 88999999999899999999999988766542 2   2211      2357765433 22233232   


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                      +++|++++++|...                         .++..+..++  ++|+++.+++..+
T Consensus       229 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  265 (339)
T 1rjw_A          229 GGVHAAVVTAVSKP-------------------------AFQSAYNSIR--RGGACVLVGLPPE  265 (339)
T ss_dssp             SSEEEEEESSCCHH-------------------------HHHHHHHHEE--EEEEEEECCCCSS
T ss_pred             CCCCEEEECCCCHH-------------------------HHHHHHHHhh--cCCEEEEecccCC
Confidence            58999999988421                         1234445554  3579999887543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.62  E-value=0.00023  Score=65.14  Aligned_cols=85  Identities=12%  Similarity=0.187  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEE--Eec--------ccChHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH--QLD--------ISDLASVS   74 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~~D--------l~~~~~v~   74 (275)
                      .|.+|||+||+|+||...+..+...|++|++++++.++.+.+ +++..   .   ..+-  ..|        ..+..+++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa---~---~vi~~~~~d~~~~~~~~~~~~~~~~  300 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGA---E---AIIDRNAEGYRFWKDENTQDPKEWK  300 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTC---C---EEEETTTTTCCSEEETTEECHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCC---c---EEEecCcCcccccccccccchHHHH
Confidence            478999999999999999998888999999999988776654 33321   1   1110  011        23455666


Q ss_pred             HHHHHHHhhcC--CccEEEcCCcc
Q 023896           75 SLADFIKTQFG--KLDILTKGDAE   96 (275)
Q Consensus        75 ~~~~~~~~~~g--~id~li~~ag~   96 (275)
                      .+.+++.+..+  ++|+++.++|.
T Consensus       301 ~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          301 RFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHhCCCCCcEEEEcCCc
Confidence            67777766543  79999999884

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.60  E-value=0.00024  Score=62.50  Aligned_cols=104  Identities=15%  Similarity=0.157  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|++|||+|+ |+||..+++.+...|+ +|++++++.++.+... ++.   ..      ..+|..+++- .+.+.++...
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G---a~------~~~~~~~~~~-~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG---AD------YVINPFEEDV-VKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT---CS------EEECTTTSCH-HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---CC------EEECCCCcCH-HHHHHHHcCC
Confidence            5789999999 9999999998888999 9999999987765443 332   11      1245554332 2222222111


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS  148 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~  148 (275)
                       ..+|+++.++|..                         ..++.+++.++  ++|+++.+++..+
T Consensus       235 -~g~D~vid~~g~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~~~  271 (348)
T 2d8a_A          235 -NGVDVFLEFSGAP-------------------------KALEQGLQAVT--PAGRVSLLGLYPG  271 (348)
T ss_dssp             -SCEEEEEECSCCH-------------------------HHHHHHHHHEE--EEEEEEECCCCSS
T ss_pred             -CCCCEEEECCCCH-------------------------HHHHHHHHHHh--cCCEEEEEccCCC
Confidence             2699999998841                         02234455554  3579999987543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.59  E-value=0.00073  Score=59.70  Aligned_cols=83  Identities=14%  Similarity=0.066  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|...+..+...|++ |++++++.++.+.+. ++ ..  .   +..+..|-.+.+++.+.+.++.. 
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~~--~---~~~~~~~~~~~~~~~~~v~~~t~-  249 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-CP--E---VVTHKVERLSAEESAKKIVESFG-  249 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-CT--T---CEEEECCSCCHHHHHHHHHHHTS-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-ch--h---cccccccccchHHHHHHHHHHhC-
Confidence            4789999998 99999999888888997 999999998766543 33 21  1   33344443444444333333221 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                      -.++|+++.+.|.
T Consensus       250 g~g~Dvvid~~g~  262 (363)
T 3m6i_A          250 GIEPAVALECTGV  262 (363)
T ss_dssp             SCCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            1279999999874

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.59  E-value=0.00024  Score=61.55  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=61.2

Q ss_pred             cCCCE-EEEecCCC-----------------c-hhHHHHHHHHHCCCEEEEEecChhH--------HHHHHHHHHhcCCC
Q 023896            4 ATKKY-AVVTGSNK-----------------G-IGFETVRQLASKGITVVLTARDEKR--------GLEAVEKLKASGVD   56 (275)
Q Consensus         4 ~~~k~-vlItGa~~-----------------g-IG~~~a~~l~~~g~~vi~~~r~~~~--------~~~~~~~l~~~~~~   56 (275)
                      +.||+ ||||+|..                 | .|.++|+.++.+||.|+++.+...-        .....+.+......
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            46777 99998875                 6 9999999999999999999874321        00001111110001


Q ss_pred             CCceeEEEecccChHHHHHHHHHH------------------------------HhhcCCccEEEcCCcccccc
Q 023896           57 PELLLFHQLDISDLASVSSLADFI------------------------------KTQFGKLDILTKGDAEVDWS  100 (275)
Q Consensus        57 ~~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~g~id~li~~ag~~~~~  100 (275)
                      +.....+.+|+....+..+.+.+.                              .+.++..|++|.+|++..+.
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            111345566666666655555432                              24567899999999987654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.57  E-value=0.00082  Score=59.11  Aligned_cols=106  Identities=14%  Similarity=0.062  Sum_probs=64.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+++|.|+|++|++|..++..++..|  .+|++.+++..+++..+.+++.......++.+     +  .+..+.+    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-----t--~d~~~al----   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-----T--SDIKEAL----   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-----E--SCHHHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-----c--CCHHHHh----
Confidence            457789999999999999999999988  48999999998887766667653221111221     1  1222222    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI  129 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  129 (275)
                         ...|++|..+|.....   ..+   -.+.+..|+--...+.+.+.
T Consensus        75 ---~dADvVvitaG~p~kp---G~~---R~dLl~~N~~I~~~i~~~i~  113 (343)
T 3fi9_A           75 ---TDAKYIVSSGGAPRKE---GMT---REDLLKGNAEIAAQLGKDIK  113 (343)
T ss_dssp             ---TTEEEEEECCC----------C---HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH
Confidence               3689999999864322   112   23334555544444444443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.56  E-value=0.00024  Score=61.24  Aligned_cols=73  Identities=16%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   83 (275)
                      .|++|||+||+|++|..+++.+...|++|+.++++.++.+... ++   +..      ..+|..+ .+-    .+++   
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~------~~~~~~~~~~~----~~~~---  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---GAE------EAATYAEVPER----AKAW---  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---TCS------EEEEGGGHHHH----HHHT---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCC------EEEECCcchhH----HHHh---
Confidence            4789999999999999999999899999999999988765542 22   211      1245554 222    2222   


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|++++ +|.
T Consensus       188 -~~~d~vid-~g~  198 (302)
T 1iz0_A          188 -GGLDLVLE-VRG  198 (302)
T ss_dssp             -TSEEEEEE-CSC
T ss_pred             -cCceEEEE-CCH
Confidence             57999999 874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.56  E-value=0.00038  Score=61.22  Aligned_cols=78  Identities=15%  Similarity=0.115  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|++++++.++.+.+.+ +   +..      ..+|..+  ++.+.+.+.  ..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~------~vi~~~~--~~~~~~~~~--~~  215 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GAD------IVLNHKE--SLLNQFKTQ--GI  215 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCS------EEECTTS--CHHHHHHHH--TC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCc------EEEECCc--cHHHHHHHh--CC
Confidence            58899999999999999999888999999999999887655433 3   211      1234433  222333333  22


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +.+|++++++|.
T Consensus       216 ~g~Dvv~d~~g~  227 (346)
T 3fbg_A          216 ELVDYVFCTFNT  227 (346)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCccEEEECCCc
Confidence            379999999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.53  E-value=0.00024  Score=59.67  Aligned_cols=82  Identities=18%  Similarity=0.227  Sum_probs=59.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +++++|+|.|+ ||+|..+++.|+..|. ++++++++.                   .+.+..++.+....... .+..+
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~-~v~~~  106 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHI-AITPV  106 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTS-EEEEE
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCc-EEEEE
Confidence            45789999997 7999999999999997 899999998                   77777777776643331 24455


Q ss_pred             EecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           64 QLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        64 ~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      ..++.+ +.+.+++       ...|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             eccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            545553 3333333       26899998864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.50  E-value=0.00036  Score=61.28  Aligned_cols=76  Identities=14%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|+||..++..+...|++|+++ ++.++.+.+ +++   +     ...  +| .+.+ +.+.+.+.... 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---G-----a~~--i~-~~~~-~~~~~~~~~~~-  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---G-----ATP--ID-ASRE-PEDYAAEHTAG-  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---T-----SEE--EE-TTSC-HHHHHHHHHTT-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---C-----CCE--ec-cCCC-HHHHHHHHhcC-
Confidence            47899999999999999999999999999999 777665443 333   2     122  45 3333 33333333221 


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      .++|+++.++|
T Consensus       215 ~g~D~vid~~g  225 (343)
T 3gaz_A          215 QGFDLVYDTLG  225 (343)
T ss_dssp             SCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            36999999988

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.47  E-value=0.00069  Score=58.21  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+++.++..+.. ..+..+
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~-v~v~~~  110 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPD-VLFEVH  110 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTT-SEEEEE
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCC-cEEEEe
Confidence            467789999988 8999999999999996 899999876                  5667777777665443 236666


Q ss_pred             EecccChHHHHHHHHHHHhh----cCCccEEEcCCc
Q 023896           64 QLDISDLASVSSLADFIKTQ----FGKLDILTKGDA   95 (275)
Q Consensus        64 ~~Dl~~~~~v~~~~~~~~~~----~g~id~li~~ag   95 (275)
                      ..++++.+.+..+++.+...    ....|+||.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            66777666666666544221    136888887653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.46  E-value=0.00014  Score=55.60  Aligned_cols=72  Identities=14%  Similarity=0.156  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++++|.|+ |++|..+++.|...|++|++++|+.++.+...+++.        ....  +..   ++.++++      
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~~--~~~---~~~~~~~------   79 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEYV--LIN---DIDSLIK------   79 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEEE--ECS---CHHHHHH------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------CceE--eec---CHHHHhc------
Confidence            3789999997 999999999999999999999999998877766553        1111  122   2233332      


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                       ..|++|++.+..
T Consensus        80 -~~Divi~at~~~   91 (144)
T 3oj0_A           80 -NNDVIITATSSK   91 (144)
T ss_dssp             -TCSEEEECSCCS
T ss_pred             -CCCEEEEeCCCC
Confidence             689999987643

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00097  Score=58.66  Aligned_cols=81  Identities=23%  Similarity=0.210  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh-
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT-   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~-   82 (275)
                      .+++|||+|+ |++|...+..+...|++|++++++.++.+.+. +   .+..      ..+|..+ .+..+++.+.... 
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~------~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-N---CGAD------VTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TTCS------EEEECCTTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-H---hCCC------EEEcCcccccHHHHHHHHhccc
Confidence            4789999997 89999999888888999999999987765442 2   2211      2235553 3333333222210 


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                      .-.++|++++++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence            01369999999874

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.44  E-value=0.00087  Score=58.25  Aligned_cols=77  Identities=12%  Similarity=0.003  Sum_probs=50.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|+||+|.+|..++..|+..|  .+|++.+++.  .+..+.++.+.... .++...    ....+.+..+       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~-~~l~~~----~~t~d~~~a~-------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR-ATVKGY----LGPEQLPDCL-------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS-CEEEEE----ESGGGHHHHH-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC-ceEEEe----cCCCCHHHHh-------C
Confidence            58999999999999999999988  6899999988  33344455442211 011111    0112333333       3


Q ss_pred             CccEEEcCCcccc
Q 023896           86 KLDILTKGDAEVD   98 (275)
Q Consensus        86 ~id~li~~ag~~~   98 (275)
                      ..|++|+.+|...
T Consensus        68 ~aDvVvi~ag~~~   80 (314)
T 1mld_A           68 GCDVVVIPAGVPR   80 (314)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7899999998754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.43  E-value=0.0015  Score=56.93  Aligned_cols=117  Identities=8%  Similarity=0.057  Sum_probs=66.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ..++++.|+|+ |++|.+++..|+..|.  +|++.+++.++++..+.++.....-...+.+.. |  +.           
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-----------   71 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-----------   71 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-----------
Confidence            35678999996 9999999999999887  899999999888877777765321000122221 1  11           


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEe
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  144 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  144 (275)
                      +.+...|++|..||.....+   ++   -.+.++.|.--...+.+.+..+   .+.+.++++|
T Consensus        72 ~a~~~aDiVvi~ag~~~kpG---~t---R~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvt  125 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQKPG---ET---RLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             GGGTTCSEEEECCCCC----------------------CHHHHHHHHHTT---TCCSEEEECS
T ss_pred             HHhcCCCEEEECCCCCCCCC---ch---HHHHHHHHHHHHHHHHHHHHhc---CCceEEEEcc
Confidence            22347899999998643221   12   2334555655555555554432   2334555554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.43  E-value=0.00016  Score=63.45  Aligned_cols=105  Identities=17%  Similarity=0.092  Sum_probs=65.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--E-----EEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--T-----VVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~-----vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      .+|+||||+|+||..++..|+..+.  +     +++.+++.  .+++..+.+++......  ..    ++....+..+  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~----~~~~~~~~~~--   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK----DVIATDKEEI--   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE----EEEEESCHHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC----CEEEcCCcHH--
Confidence            4799999999999999999998775  4     89999875  35666666776532111  11    2211112111  


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhh
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  130 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  130 (275)
                           .+...|++|+.||.....   .++   ..+.++.|+.....+++.+..
T Consensus        76 -----~~~daDvVvitAg~prkp---G~t---R~dll~~N~~i~~~i~~~i~~  117 (333)
T 5mdh_A           76 -----AFKDLDVAILVGSMPRRD---GME---RKDLLKANVKIFKCQGAALDK  117 (333)
T ss_dssp             -----HTTTCSEEEECCSCCCCT---TCC---TTTTHHHHHHHHHHHHHHHHH
T ss_pred             -----HhCCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHH
Confidence                 223789999999864321   122   334466676666666665544

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.42  E-value=0.0012  Score=58.62  Aligned_cols=79  Identities=15%  Similarity=0.196  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++   +..      ..+|..+ .+++.+.+.++..
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~------~vi~~~~~~~~~~~~~~~~~~  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GAT------DFVNPNDHSEPISQVLSKMTN  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCC------EEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCc------eEEeccccchhHHHHHHHHhC
Confidence            4789999996 9999999988888899 8999999988766543 22   211      2245554 1334444444433


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +++|+++.++|.
T Consensus       261 --~g~D~vid~~g~  272 (374)
T 1cdo_A          261 --GGVDFSLECVGN  272 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999874

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.41  E-value=0.0023  Score=55.90  Aligned_cols=117  Identities=13%  Similarity=0.084  Sum_probs=70.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ...+++.|+|+ |.+|.+++..|+..|.  +|++.+++.++++..+.+++....- ...+.+...|   .          
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----------   68 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----------   68 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----------
Confidence            34577999996 9999999999999987  8999999998888777677653110 0112332212   1          


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEe
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  144 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  144 (275)
                       +.+..-|++|..+|.....   ..+.   .+.+..|.--...+.+.+..+   .+.+.++++|
T Consensus        69 -~a~~~aDvVvi~ag~p~kp---G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvt  122 (326)
T 3pqe_A           69 -EDCKDADIVCICAGANQKP---GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVAT  122 (326)
T ss_dssp             -GGGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -HHhCCCCEEEEecccCCCC---CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcC
Confidence             1234789999999864322   1222   233555554444444444332   2334455544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.36  E-value=0.00013  Score=56.45  Aligned_cols=77  Identities=17%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+...+   ..   .  ...+..|..+.+.+.+.      .
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~---g--~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF---S--GFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC---C--SEEEESCTTSHHHHHTT------T
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC---C--CcEEEecCCCHHHHHHc------C
Confidence            35688999996 999999999999999999999999876433210   11   1  44566777765432211      1


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                      ..+.|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            236899998876

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.36  E-value=0.00038  Score=59.29  Aligned_cols=49  Identities=16%  Similarity=0.253  Sum_probs=43.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.+++++.++++..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~  166 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH  166 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc
Confidence            357899999998 7999999999999996 999999999998888877653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.36  E-value=0.00024  Score=56.41  Aligned_cols=77  Identities=13%  Similarity=0.116  Sum_probs=55.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.++.++|.|+ |.+|..+++.|.+. |++|+++++++++.+...    ..+     +.++..|.++.+.+.++     .
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g-----~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG-----RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT-----CCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC-----CCEEEcCCCCHHHHHhc-----c
Confidence            34667888985 99999999999999 999999999997765532    222     44667788876543321     0


Q ss_pred             hcCCccEEEcCCc
Q 023896           83 QFGKLDILTKGDA   95 (275)
Q Consensus        83 ~~g~id~li~~ag   95 (275)
                      ...+.|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1347899988765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.34  E-value=0.00095  Score=50.65  Aligned_cols=74  Identities=15%  Similarity=0.051  Sum_probs=56.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+.++|.|+ |.+|..+++.|.+.|++|+++++++++.+...+    .+     +.++..|.++++.++++      ...
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~~~~~~l~~a------~i~   70 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG-----VRAVLGNAANEEIMQLA------HLE   70 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEESCTTSHHHHHHT------TGG
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC-----CCEEECCCCCHHHHHhc------Ccc
Confidence            356888887 889999999999999999999999987665432    22     66788999988765442      123


Q ss_pred             CccEEEcCCc
Q 023896           86 KLDILTKGDA   95 (275)
Q Consensus        86 ~id~li~~ag   95 (275)
                      +.|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (140)
T 3fwz_A           71 CAKWLILTIP   80 (140)
T ss_dssp             GCSEEEECCS
T ss_pred             cCCEEEEECC
Confidence            6788887755

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.32  E-value=0.00039  Score=60.98  Aligned_cols=77  Identities=12%  Similarity=0.134  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|..++..+...|+ +|+.++++.++.+... ++     .   -  ..+|..++ ++.+.+.++.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-----a---~--~v~~~~~~-~~~~~~~~~~--  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-----A---D--RLVNPLEE-DLLEVVRRVT--  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-----C---S--EEECTTTS-CHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----H---H--hccCcCcc-CHHHHHHHhc--
Confidence            5789999999 9999999988888899 9999999987654331 11     1   1  12455543 3333333332  


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                      -.++|+++.++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999884

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.31  E-value=0.0019  Score=57.15  Aligned_cols=79  Identities=11%  Similarity=0.140  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .|.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+. ++.   ..      ..+|..+ .+++.+.+.++..
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lG---a~------~vi~~~~~~~~~~~~v~~~~~  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFG---AT------ECINPQDFSKPIQEVLIEMTD  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHT---CS------EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC---Cc------eEeccccccccHHHHHHHHhC
Confidence            4789999996 9999999888878899 8999999988766543 332   11      1245553 1334444444332


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.++|.
T Consensus       259 --~g~D~vid~~g~  270 (373)
T 2fzw_A          259 --GGVDYSFECIGN  270 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCc
Confidence              479999999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.25  E-value=0.0036  Score=55.08  Aligned_cols=79  Identities=22%  Similarity=0.205  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc--ChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~   81 (275)
                      .|.+|||+|+ |++|...+..+...|+ +|++++++.++.+.+. ++   +..      ..+|..  +.++..+.+.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~------~vi~~~~~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD------LVLQISKESPQEIARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS------EEEECSSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCC------EEEcCcccccchHHHHHHHHh
Confidence            4789999996 8999999888778899 8999999987765442 22   211      123444  2223222222222


Q ss_pred             hhcCCccEEEcCCcc
Q 023896           82 TQFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~~~g~id~li~~ag~   96 (275)
                      .  +++|+++.++|.
T Consensus       240 ~--~g~D~vid~~g~  252 (356)
T 1pl8_A          240 G--CKPEVTIECTGA  252 (356)
T ss_dssp             T--SCCSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  479999999873

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.24  E-value=0.0026  Score=56.41  Aligned_cols=79  Identities=14%  Similarity=0.159  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .|.+|||+|+ |+||...+..+...|+ +|+.++++.++.+.+. ++   +..      ..+|..+ .+++.+.+.++..
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~------~vi~~~~~~~~~~~~v~~~~~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL---GAT------DCLNPRELDKPVQDVITELTA  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCS------EEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCc------EEEccccccchHHHHHHHHhC
Confidence            4789999996 9999999888888899 8999999988766542 22   211      1245553 1234444444333


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus       264 --~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 --GGVDYSLDCAGT  275 (376)
T ss_dssp             --SCBSEEEESSCC
T ss_pred             --CCccEEEECCCC
Confidence              479999999874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.23  E-value=0.00058  Score=55.87  Aligned_cols=73  Identities=18%  Similarity=0.177  Sum_probs=56.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +++|.|+ |.+|..+++.|.++|++|+++++++++.+...+..   +     ..++..|.++++.+.++      ...+.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~-----~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---K-----ATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---S-----SEEEESCTTSHHHHHHH------TCCTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---C-----CeEEEcCCCCHHHHHhc------CcccC
Confidence            5899997 89999999999999999999999998766554321   1     56788999987765433      12467


Q ss_pred             cEEEcCCc
Q 023896           88 DILTKGDA   95 (275)
Q Consensus        88 d~li~~ag   95 (275)
                      |++|.+.+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            88887654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.22  E-value=0.0013  Score=58.08  Aligned_cols=78  Identities=17%  Similarity=0.174  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+| +|++|...+..+...|++|++++++.++.+.+ +++   +..      ..+| .+.+++.+.+.++... 
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~------~vi~-~~~~~~~~~v~~~~~g-  255 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GAD------HGIN-RLEEDWVERVYALTGD-  255 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS------EEEE-TTTSCHHHHHHHHHTT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCC------EEEc-CCcccHHHHHHHHhCC-
Confidence            478999999 89999999988888999999999998876654 333   211      2235 4434443333333221 


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      .++|+++.++|
T Consensus       256 ~g~D~vid~~g  266 (363)
T 3uog_A          256 RGADHILEIAG  266 (363)
T ss_dssp             CCEEEEEEETT
T ss_pred             CCceEEEECCC
Confidence            26999999988

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.12  E-value=0.0019  Score=57.01  Aligned_cols=86  Identities=12%  Similarity=0.046  Sum_probs=51.5

Q ss_pred             CC-CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh--HHHHHHHHHHH
Q 023896            5 TK-KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL--ASVSSLADFIK   81 (275)
Q Consensus         5 ~~-k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~   81 (275)
                      .| .+|||+||+|++|...+..+...|++|+.++++..+.++..+.+.+.+..    .  .+|..+.  +++.+.+.++.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~----~--vi~~~~~~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----Q--VITEDQNNSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----E--EEEHHHHHCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe----E--EEecCccchHHHHHHHHHHh
Confidence            46 89999999999999988877778999999987765422222222222221    1  1233320  22222222222


Q ss_pred             h-hcCCccEEEcCCcc
Q 023896           82 T-QFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~-~~g~id~li~~ag~   96 (275)
                      . .-+++|+++.+.|.
T Consensus       240 ~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          240 KQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHTCCEEEEEESSCH
T ss_pred             hccCCCceEEEECCCc
Confidence            0 12379999999873

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.12  E-value=0.0017  Score=58.43  Aligned_cols=73  Identities=18%  Similarity=0.305  Sum_probs=54.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+..+++..++++.        ...  .+.   +++.+++    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--------~~~--~~~---~~l~~~l----  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA--VRF---DELVDHL----  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE--CCG---GGHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--------Cce--ecH---HhHHHHh----
Confidence            357899999998 9999999999999999 99999999988766655542        111  222   2333332    


Q ss_pred             hhcCCccEEEcCCcc
Q 023896           82 TQFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~~~g~id~li~~ag~   96 (275)
                         ...|++|++.+.
T Consensus       226 ---~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ---ARSDVVVSATAA  237 (404)
T ss_dssp             ---HTCSEEEECCSS
T ss_pred             ---cCCCEEEEccCC
Confidence               268999998764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.08  E-value=0.00073  Score=58.78  Aligned_cols=75  Identities=20%  Similarity=0.170  Sum_probs=49.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +|||+||+|++|..+++.+...|++|+.++++.++.+.+. ++   +..      ..+|..+.+  ...++++.  -+++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~------~~i~~~~~~--~~~~~~~~--~~~~  217 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---GAK------EVLAREDVM--AERIRPLD--KQRW  217 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---TCS------EEEECC-----------CC--SCCE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---CCc------EEEecCCcH--HHHHHHhc--CCcc
Confidence            7999999999999999988889999999999987765542 22   211      123544432  12222221  1379


Q ss_pred             cEEEcCCcc
Q 023896           88 DILTKGDAE   96 (275)
Q Consensus        88 d~li~~ag~   96 (275)
                      |+++.++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.07  E-value=0.007  Score=52.53  Aligned_cols=118  Identities=18%  Similarity=0.066  Sum_probs=69.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC--hhHHHHHHHHHHhcC---CCCCceeEEEecccChHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD--EKRGLEAVEKLKASG---VDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~--~~~~~~~~~~l~~~~---~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      +++.+++.|.|+ |.+|..++..|+..|+ +|++.+++  ..+++....++....   ...  ..+...  .+.      
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~--~~i~~t--~d~------   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFD--ANIIGT--SDY------   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCC--CCEEEE--SCG------
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCC--CEEEEc--CCH------
Confidence            456778999997 9999999999999999 99999999  455554444443221   011  111111  111      


Q ss_pred             HHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           77 ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                           +.+...|++|..+|.....+   .+.   .+.+..|.--...+.+.+..+   .+.+.++++|-
T Consensus        74 -----~a~~~aDvVIiaag~p~kpg---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsN  128 (315)
T 3tl2_A           74 -----ADTADSDVVVITAGIARKPG---MSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTN  128 (315)
T ss_dssp             -----GGGTTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             -----HHhCCCCEEEEeCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCC
Confidence                 12347899999998644321   232   334555554444444444432   23345555553

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.05  E-value=0.0034  Score=54.81  Aligned_cols=76  Identities=17%  Similarity=0.265  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+|+ |++|...+..+...|++|+.++++.++.+.. ++   .+..      ..+|..+++..+.+.+    ..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~------~~i~~~~~~~~~~~~~----~~  230 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RR---LGAE------VAVNARDTDPAAWLQK----EI  230 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH---TTCS------EEEETTTSCHHHHHHH----HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HH---cCCC------EEEeCCCcCHHHHHHH----hC
Confidence            5789999997 8999999988888999999999999876644 22   2221      2246665444333322    33


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      +++|+++.++|
T Consensus       231 g~~d~vid~~g  241 (340)
T 3s2e_A          231 GGAHGVLVTAV  241 (340)
T ss_dssp             SSEEEEEESSC
T ss_pred             CCCCEEEEeCC
Confidence            68999999886

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.03  E-value=0.0062  Score=52.90  Aligned_cols=83  Identities=16%  Similarity=0.219  Sum_probs=54.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      |++++..++.|.|+ |.+|..++..|+..|.  +|++.++++++++.....+..... ....+.+.. |  +.       
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~-------   69 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EY-------   69 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CG-------
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CH-------
Confidence            66677778999999 9999999999998884  899999998877655555443210 001122221 1  11       


Q ss_pred             HHHHhhcCCccEEEcCCcccc
Q 023896           78 DFIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~   98 (275)
                          +.+..-|++|..+|...
T Consensus        70 ----~a~~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           70 ----SDCHDADLVVICAGAAQ   86 (317)
T ss_dssp             ----GGGTTCSEEEECCCCCC
T ss_pred             ----HHhCCCCEEEECCCCCC
Confidence                12347899999998643

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0025  Score=56.19  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|...+..+... |++|+.++++.++.+.+. ++   +..      ..+|..++  +.+.+.++.. 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~------~vi~~~~~--~~~~v~~~~~-  251 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GAD------HVVDARRD--PVKQVMELTR-  251 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCS------EEEETTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCC------EEEeccch--HHHHHHHHhC-
Confidence            4789999999 89999998877778 999999999987765543 22   211      12455554  3333333322 


Q ss_pred             cC-CccEEEcCCcc
Q 023896           84 FG-KLDILTKGDAE   96 (275)
Q Consensus        84 ~g-~id~li~~ag~   96 (275)
                       + ++|+++.++|.
T Consensus       252 -g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 -GRGVNVAMDFVGS  264 (359)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCCcEEEECCCC
Confidence             3 69999999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.02  E-value=0.003  Score=56.76  Aligned_cols=42  Identities=14%  Similarity=0.104  Sum_probs=37.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +.+++|+|.|+ |.+|..+++.+...|++|++++++..+++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            46889999997 8999999999999999999999999876654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.99  E-value=0.0081  Score=52.48  Aligned_cols=118  Identities=11%  Similarity=0.053  Sum_probs=71.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      ..+++.|+|+ |++|.+++..|+.+|.  +|++.+++..+++..+.+++....-......+..  .+.+           
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~-----------   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS-----------   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH-----------
Confidence            4578999998 9999999999999987  8999999998888877777653100000112211  1211           


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      .+..-|++|..+|.....   .++..   +.++.|.--...+.+.+..+   .+.+.++++|-
T Consensus        84 ~~~~aDiVvi~aG~~~kp---G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  137 (331)
T 4aj2_A           84 VTANSKLVIITAGARQQE---GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSN  137 (331)
T ss_dssp             GGTTEEEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             HhCCCCEEEEccCCCCCC---CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence            124789999999875432   22332   34555554444444444432   23345555554

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.98  E-value=0.0022  Score=53.83  Aligned_cols=83  Identities=18%  Similarity=0.276  Sum_probs=55.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLF   62 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   62 (275)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+..++.+...... ..+..
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-~~v~~  102 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD-IQLTA  102 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC-CEEEE
Confidence            356789999998 7899999999999997 788886653                   5666677777654433 12444


Q ss_pred             EEecccChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           63 HQLDISDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        63 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      +..+++. +.+.++++       ..|+||++..
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            4444442 34344433       5799988754

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.96  E-value=0.0026  Score=56.33  Aligned_cols=79  Identities=13%  Similarity=0.195  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .+.+|||+|+ |++|..++..+...|+ +|+.++++.++.+.+. ++   +..      ..+|..+ .+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~------~vi~~~~~~~~~~~~~~~~~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GAT------ECVNPQDYKKPIQEVLTEMSN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCS------EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCc------eEecccccchhHHHHHHHHhC
Confidence            4789999995 9999999988888899 8999999988766542 22   211      2245554 1334444444432


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +++|+++.++|.
T Consensus       260 --~g~D~vid~~g~  271 (374)
T 2jhf_A          260 --GGVDFSFEVIGR  271 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEEEECCCC
Confidence              479999999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.95  E-value=0.0016  Score=57.55  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|..+++.+...|++|+.++++.++.+.+. ++.   ..      ..+|..+. +.    .+++.  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lG---a~------~v~~~~~~~~~----~~~~~--  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMG---AD------HYIATLEEGDW----GEKYF--  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHT---CS------EEEEGGGTSCH----HHHSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcC---CC------EEEcCcCchHH----HHHhh--
Confidence            4789999999 99999998888888999999999988766543 332   11      12355443 22    22222  


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|+++.++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             589999999885

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.87  E-value=0.0034  Score=55.49  Aligned_cols=77  Identities=18%  Similarity=0.187  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+||+|++|...+..+.. .|++|+.++++.++.+.+. +   .+..      ..+|..+  ++   .+++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~---lGad------~vi~~~~--~~---~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-S---LGAH------HVIDHSK--PL---AAEVAAL  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-H---TTCS------EEECTTS--CH---HHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-H---cCCC------EEEeCCC--CH---HHHHHHh
Confidence            478999999999999887765554 5899999999988765542 2   2221      1234443  22   2333333


Q ss_pred             c-CCccEEEcCCcc
Q 023896           84 F-GKLDILTKGDAE   96 (275)
Q Consensus        84 ~-g~id~li~~ag~   96 (275)
                      . +++|+++.++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence            2 479999999873

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.87  E-value=0.0036  Score=55.65  Aligned_cols=80  Identities=14%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             CCCEEEEec-CCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItG-a~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|||.| |+|++|...+..+...|++|+.++++.++.+.+. +   .+..      ..+|..+.+-.+++.+.... 
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~------~~~~~~~~~~~~~v~~~t~~-  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-A---QGAV------HVCNAASPTFMQDLTEALVS-  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-H---TTCS------CEEETTSTTHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---CCCc------EEEeCCChHHHHHHHHHhcC-
Confidence            467899987 8999999998888888999999999988765543 2   2221      12455554433333322221 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       ..+|+++.+.|.
T Consensus       239 -~g~d~v~d~~g~  250 (379)
T 3iup_A          239 -TGATIAFDATGG  250 (379)
T ss_dssp             -HCCCEEEESCEE
T ss_pred             -CCceEEEECCCc
Confidence             269999999885

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.86  E-value=0.0017  Score=57.66  Aligned_cols=79  Identities=15%  Similarity=0.170  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .+.+|||+|+ |++|...+..+...|+ +|++++++.++.+.+ ++   .+..      ..+|..+ .+++.+.+.++..
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~------~vi~~~~~~~~~~~~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KK---FGVN------EFVNPKDHDKPIQEVIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HT---TTCC------EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCc------EEEccccCchhHHHHHHHhcC
Confidence            4789999998 9999999888888899 899999999876643 22   2221      1345553 2334444444432


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +++|+++.++|.
T Consensus       262 --gg~D~vid~~g~  273 (378)
T 3uko_A          262 --GGVDYSFECIGN  273 (378)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              379999999884

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0034  Score=55.63  Aligned_cols=74  Identities=19%  Similarity=0.193  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+|+ |++|..++..+...|++|++++++.++.+.+. ++.   ..      ..+|..+.+.+    +++.   
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lG---a~------~vi~~~~~~~~----~~~~---  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALG---AD------EVVNSRNADEM----AAHL---  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHT---CS------EEEETTCHHHH----HTTT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---Cc------EEeccccHHHH----HHhh---
Confidence            4789999998 89999999888888999999999988766543 332   11      12455554322    2222   


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|+++.++|.
T Consensus       256 ~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 KSFDFILNTVAA  267 (369)
T ss_dssp             TCEEEEEECCSS
T ss_pred             cCCCEEEECCCC
Confidence            579999999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.83  E-value=0.0028  Score=56.15  Aligned_cols=80  Identities=21%  Similarity=0.192  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|...+..+...|+ +|++++++.++.+.. +++.   ..      ...|.++.+-.+. +.+....
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG---a~------~vi~~~~~~~~~~-i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVG---AT------ATVDPSAGDVVEA-IAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT---CS------EEECTTSSCHHHH-HHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC---CC------EEECCCCcCHHHH-HHhhhhc
Confidence            4789999998 9999999888888899 899999998775533 3332   11      2245555443222 2221102


Q ss_pred             -cCCccEEEcCCcc
Q 023896           84 -FGKLDILTKGDAE   96 (275)
Q Consensus        84 -~g~id~li~~ag~   96 (275)
                       .+++|+++.++|.
T Consensus       250 ~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          250 VPGGVDVVIECAGV  263 (370)
T ss_dssp             STTCEEEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence             2479999999873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.82  E-value=0.0045  Score=54.84  Aligned_cols=79  Identities=13%  Similarity=0.083  Sum_probs=53.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      -.|.+|||+||+|++|...+..+...|++|+.+. +.++.+. ++++   +..      ..+|..+.+-. +.+.++.. 
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l---Ga~------~vi~~~~~~~~-~~v~~~t~-  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR---GAE------EVFDYRAPNLA-QTIRTYTK-  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT---TCS------EEEETTSTTHH-HHHHHHTT-
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc---CCc------EEEECCCchHH-HHHHHHcc-
Confidence            4578999999999999999988888999999887 5555442 2332   211      23466554432 22222221 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|+++.+.|.
T Consensus       230 -g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 -NNLRYALDCITN  241 (371)
T ss_dssp             -TCCCEEEESSCS
T ss_pred             -CCccEEEECCCc
Confidence             469999999884

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.80  E-value=0.02  Score=48.67  Aligned_cols=46  Identities=20%  Similarity=0.133  Sum_probs=38.2

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      ||++  ++|.|.|+ |.+|.+++..|+..|++|++.+|++++++...+.
T Consensus         1 Mm~~--~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            1 MTGI--TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCSC--CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCCC--CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            5543  56777776 8899999999999999999999999887776654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.80  E-value=0.0057  Score=53.71  Aligned_cols=105  Identities=16%  Similarity=0.041  Sum_probs=61.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~   74 (275)
                      ++.-+|.|+||+|+||..++..|+....       ++.+.+.++.  .++...-+++....... ....   .....  .
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~-~~~~---~~~~~--~   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLL-DKVV---VTADP--R   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTE-EEEE---EESCH--H
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCC-CcEE---EcCCh--H
Confidence            3455799999999999999999987643       6889998764  34555556665322211 1111   12211  1


Q ss_pred             HHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHH
Q 023896           75 SLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  127 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  127 (275)
                             +.+..-|++|..||....+   .++.++   .++.|.-=.-.+.+.
T Consensus        96 -------~a~~~advVvi~aG~prkp---GmtR~D---Ll~~Na~I~~~~~~~  135 (345)
T 4h7p_A           96 -------VAFDGVAIAIMCGAFPRKA---GMERKD---LLEMNARIFKEQGEA  135 (345)
T ss_dssp             -------HHTTTCSEEEECCCCCCCT---TCCHHH---HHHHHHHHHHHHHHH
T ss_pred             -------HHhCCCCEEEECCCCCCCC---CCCHHH---HHHHhHHHHHHHHHH
Confidence                   1234789999999875432   234433   355554433333333

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.80  E-value=0.0034  Score=54.95  Aligned_cols=76  Identities=22%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~   81 (275)
                      .|.+|||+|+ |++|...++.+...  |++|+.++++.++.+.+. ++   +..      ..+|..+ ++    .++++.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~------~vi~~~~~~~----~~~~~~  234 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GAD------YVSEMKDAES----LINKLT  234 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCS------EEECHHHHHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCC------EEeccccchH----HHHHhh
Confidence            5789999999 89999998888788  999999999988765543 33   211      1234433 22    233333


Q ss_pred             hhcCCccEEEcCCcc
Q 023896           82 TQFGKLDILTKGDAE   96 (275)
Q Consensus        82 ~~~g~id~li~~ag~   96 (275)
                      + -.++|+++.++|.
T Consensus       235 ~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          235 D-GLGASIAIDLVGT  248 (344)
T ss_dssp             T-TCCEEEEEESSCC
T ss_pred             c-CCCccEEEECCCC
Confidence            2 1279999999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0063  Score=54.07  Aligned_cols=78  Identities=22%  Similarity=0.221  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc--ChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~   81 (275)
                      .|.+|||+| +|++|...++.+...| ++|+.++++.++.+.+. +   .+..      ..+|..  +.+++.   +++.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~------~vi~~~~~~~~~~~---~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGAD------LTLNRRETSVEERR---KAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCS------EEEETTTSCHHHHH---HHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCc------EEEeccccCcchHH---HHHH
Confidence            478999999 8999999998888889 59999999988765543 2   2211      123443  133333   3333


Q ss_pred             hhc-C-CccEEEcCCcc
Q 023896           82 TQF-G-KLDILTKGDAE   96 (275)
Q Consensus        82 ~~~-g-~id~li~~ag~   96 (275)
                      +.. + ++|+++.++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            332 2 69999999884

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.79  E-value=0.0025  Score=51.56  Aligned_cols=42  Identities=19%  Similarity=0.303  Sum_probs=37.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      +++|+||+|.+|.++++.|++.|++|++.+|+.++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877665543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.78  E-value=0.0051  Score=55.15  Aligned_cols=77  Identities=23%  Similarity=0.292  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+ +++.   ..      ..+|..+.+-.+    ++.+.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lG---a~------~vi~~~~~~~~~----~i~~~  277 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELG---AD------HVIDPTKENFVE----AVLDY  277 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT---CS------EEECTTTSCHHH----HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC---CC------EEEcCCCCCHHH----HHHHH
Confidence            4789999998 9999998888888899 899999998876544 3332   11      224555544322    23332


Q ss_pred             c-C-CccEEEcCCcc
Q 023896           84 F-G-KLDILTKGDAE   96 (275)
Q Consensus        84 ~-g-~id~li~~ag~   96 (275)
                      . + ++|+++.+.|.
T Consensus       278 t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          278 TNGLGAKLFLEATGV  292 (404)
T ss_dssp             TTTCCCSEEEECSSC
T ss_pred             hCCCCCCEEEECCCC
Confidence            2 2 69999999884

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.76  E-value=0.0028  Score=54.95  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+||+|++|...+..+...|++|+.++++. + .+.++++   +..      ...|..+.+.+.+       ..
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l---Ga~------~~i~~~~~~~~~~-------~~  213 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL---GAE------QCINYHEEDFLLA-------IS  213 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH---TCS------EEEETTTSCHHHH-------CC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc---CCC------EEEeCCCcchhhh-------hc
Confidence            578999999999999999998888999999888543 3 2333333   211      1245555442221       22


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|+++.+.|.
T Consensus       214 ~g~D~v~d~~g~  225 (321)
T 3tqh_A          214 TPVDAVIDLVGG  225 (321)
T ss_dssp             SCEEEEEESSCH
T ss_pred             cCCCEEEECCCc
Confidence            479999999873

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.74  E-value=0.0017  Score=57.26  Aligned_cols=75  Identities=21%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+|+ |+||...+..+...|++|++++++.++.+...++   .+..      ...|..+.+.+    +   +..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~------~vi~~~~~~~~----~---~~~  242 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGAD------DYVIGSDQAKM----S---ELA  242 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCS------CEEETTCHHHH----H---HST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCc------eeeccccHHHH----H---Hhc
Confidence            5789999995 9999999988878899999999998765554322   2211      12344443322    2   222


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|+++.++|.
T Consensus       243 ~g~D~vid~~g~  254 (357)
T 2cf5_A          243 DSLDYVIDTVPV  254 (357)
T ss_dssp             TTEEEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.73  E-value=0.0014  Score=55.97  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=38.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVE   48 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~   48 (275)
                      +++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++++++++
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            56899999998 6999999999999998 89999999987666543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.71  E-value=0.0047  Score=54.66  Aligned_cols=79  Identities=16%  Similarity=0.251  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .|.+|||+|+ |+||...+..+...|+ +|+.++++.++.+.+. ++   +..      ..+|..+. +++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~------~vi~~~~~~~~~~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GAT------ECLNPKDYDKPIYEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCS------EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCc------EEEecccccchHHHHHHHHhC
Confidence            4789999996 9999998887777898 8999999988766543 22   211      12455431 234333433322


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.++|.
T Consensus       260 --gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 --GGVDYAVECAGR  271 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999874

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.67  E-value=0.013  Score=51.09  Aligned_cols=48  Identities=19%  Similarity=0.084  Sum_probs=39.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      |+.+++.|.|+ |.+|.+++..|+..|+ +|++.++++++++....++..
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            45678999998 9999999999999998 999999999877655555543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.66  E-value=0.014  Score=53.06  Aligned_cols=81  Identities=15%  Similarity=0.050  Sum_probs=54.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++|+++|.|. |+.|+++|+.|+++|++|.+.+++........+.+...+     +.+....-  .++         
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~g-----i~~~~g~~--~~~---------   67 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEG-----IKVVCGSH--PLE---------   67 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTT-----CEEEESCC--CGG---------
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCC-----CEEEECCC--hHH---------
Confidence            5678899999999 889999999999999999999986532222334455443     33322111  110         


Q ss_pred             hhcCC-ccEEEcCCcccccc
Q 023896           82 TQFGK-LDILTKGDAEVDWS  100 (275)
Q Consensus        82 ~~~g~-id~li~~ag~~~~~  100 (275)
                       .+.. .|.+|.+.|+....
T Consensus        68 -~~~~~~d~vv~spgi~~~~   86 (451)
T 3lk7_A           68 -LLDEDFCYMIKNPGIPYNN   86 (451)
T ss_dssp             -GGGSCEEEEEECTTSCTTS
T ss_pred             -hhcCCCCEEEECCcCCCCC
Confidence             1124 89999998876543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.0069  Score=54.08  Aligned_cols=80  Identities=14%  Similarity=0.091  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||.|+ |++|...+..+...|+ +|++++++.++.+.+. ++   +     ..  .+|.++.+.+.+.+.++...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l---G-----a~--~i~~~~~~~~~~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ---G-----FE--IADLSLDTPLHEQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---T-----CE--EEETTSSSCHHHHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc---C-----Cc--EEccCCcchHHHHHHHHhCC
Confidence            4789999995 9999998887777898 7999999988766542 22   2     22  24555544333333322211


Q ss_pred             cCCccEEEcCCccc
Q 023896           84 FGKLDILTKGDAEV   97 (275)
Q Consensus        84 ~g~id~li~~ag~~   97 (275)
                       .++|+++.++|..
T Consensus       253 -~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 -PEVDCAVDAVGFE  265 (398)
T ss_dssp             -SCEEEEEECCCTT
T ss_pred             -CCCCEEEECCCCc
Confidence             2699999998853

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.63  E-value=0.009  Score=52.23  Aligned_cols=36  Identities=14%  Similarity=0.290  Sum_probs=31.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            46789999998 8999999999999997 788888754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.60  E-value=0.0031  Score=53.47  Aligned_cols=43  Identities=19%  Similarity=0.202  Sum_probs=39.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.+++++++ ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999997 99999999999999999999999999888876 44

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.59  E-value=0.0021  Score=56.95  Aligned_cols=47  Identities=17%  Similarity=0.170  Sum_probs=41.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      +++||+|+|.|. |.+|..+++.|.+.|++|++.+++..++++.++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            678999999997 88999999999999999999999998877766654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.58  E-value=0.0024  Score=56.29  Aligned_cols=37  Identities=22%  Similarity=0.376  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .|.+|||+||+|++|...+..+...|++++.+.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            4789999999999999988877778999888776543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.51  E-value=0.0042  Score=53.41  Aligned_cols=43  Identities=12%  Similarity=0.017  Sum_probs=35.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~   51 (275)
                      ++.|.|+ |.+|.+++..|+..|.  +|++.++++++++....+++
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~   46 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLA   46 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHH
Confidence            5889999 9999999999999998  89999999988764444443

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.50  E-value=0.035  Score=47.75  Aligned_cols=75  Identities=16%  Similarity=0.174  Sum_probs=48.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.|+ |.+|..++..|+..|+  +|++.++++++++....++.....-.....+..   .+.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhC
Confidence            6888998 9999999999999998  999999998877655555543211000122211   1211           124


Q ss_pred             CccEEEcCCccc
Q 023896           86 KLDILTKGDAEV   97 (275)
Q Consensus        86 ~id~li~~ag~~   97 (275)
                      ..|++|..++..
T Consensus        67 ~aDvVIi~~~~~   78 (304)
T 2v6b_A           67 DAQVVILTAGAN   78 (304)
T ss_dssp             TCSEEEECC---
T ss_pred             CCCEEEEcCCCC
Confidence            789999998754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.50  E-value=0.0053  Score=53.65  Aligned_cols=44  Identities=23%  Similarity=0.071  Sum_probs=37.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      .+++.|.|| |.+|.+++..|+..|+ +|++.++++++++.....+
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l   53 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   53 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence            357899998 9999999999999998 9999999998777644433

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.49  E-value=0.031  Score=48.54  Aligned_cols=48  Identities=19%  Similarity=0.098  Sum_probs=39.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      |+.+++.|.|+ |.+|.+++..|+..|. +|++.++++++++..+.++..
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            34567888895 9999999999999888 999999999887766666654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.45  E-value=0.0068  Score=53.19  Aligned_cols=77  Identities=13%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+ +++.   ..      ..+|..+.+-.    +++.+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lG---a~------~vi~~~~~~~~----~~v~~~  230 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYG---AT------DIINYKNGDIV----EQILKA  230 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHT---CC------EEECGGGSCHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhC---Cc------eEEcCCCcCHH----HHHHHH
Confidence            4788999986 9999998888888899 799999998776543 3332   11      22455554432    233332


Q ss_pred             c-C-CccEEEcCCcc
Q 023896           84 F-G-KLDILTKGDAE   96 (275)
Q Consensus        84 ~-g-~id~li~~ag~   96 (275)
                      . + ++|+++.+.|.
T Consensus       231 t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTTCCEEEEEECSSC
T ss_pred             cCCCCCCEEEECCCC
Confidence            2 2 69999998874

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.43  E-value=0.025  Score=49.30  Aligned_cols=117  Identities=11%  Similarity=-0.001  Sum_probs=72.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEE-EecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFH-QLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~   81 (275)
                      ..+++.|.|+ |.+|..++..|+..|.  +|++.+++.++++..+.+++....-....... ..|..             
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------------
Confidence            3467999999 9999999999999987  89999999988877666665421000001122 11221             


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                       .+...|++|..+|.....+   ++..   +.+..|.--...+.+.+..+   .+.+.++++|-
T Consensus        86 -~~~daDiVIitaG~p~kpG---~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtN  139 (330)
T 3ldh_A           86 -VSAGSKLVVITAGARQQEG---ESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHPE  139 (330)
T ss_dssp             -SCSSCSEEEECCSCCCCSS---CCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             -HhCCCCEEEEeCCCCCCCC---CCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCCC
Confidence             1247899999998754321   2322   33444544444444444443   34567777765

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.42  E-value=0.021  Score=49.55  Aligned_cols=78  Identities=9%  Similarity=0.083  Sum_probs=49.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++.|+|+ |.+|..++..|+..|.  +|++.+.+.++++....++.+...-...+.+..   .+           .+.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~-----------~~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD-----------YSD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC-----------HHH
Confidence            356888998 9999999999999987  899999998776665556654321000122211   11           112


Q ss_pred             cCCccEEEcCCcccc
Q 023896           84 FGKLDILTKGDAEVD   98 (275)
Q Consensus        84 ~g~id~li~~ag~~~   98 (275)
                      +..-|++|..+|...
T Consensus        72 ~~~aDvVii~~g~p~   86 (318)
T 1y6j_A           72 VKDCDVIVVTAGANR   86 (318)
T ss_dssp             GTTCSEEEECCCC--
T ss_pred             hCCCCEEEEcCCCCC
Confidence            347899999998643

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.42  E-value=0.0066  Score=54.24  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||.|+ |++|...+..+...|+ +|+.++++.++.+.+.    +.+     ..  .+|..+.+.+.+.+.++...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lG-----a~--~i~~~~~~~~~~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAG-----FE--TIDLRNSAPLRDQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTT-----CE--EEETTSSSCHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcC-----Cc--EEcCCCcchHHHHHHHHhCC
Confidence            4789999997 9999998887777899 8999999988765432    222     22  24555543212222222211


Q ss_pred             cCCccEEEcCCccc
Q 023896           84 FGKLDILTKGDAEV   97 (275)
Q Consensus        84 ~g~id~li~~ag~~   97 (275)
                       .++|+++.+.|..
T Consensus       253 -~g~Dvvid~~g~~  265 (398)
T 2dph_A          253 -PEVDCGVDAVGFE  265 (398)
T ss_dssp             -SCEEEEEECSCTT
T ss_pred             -CCCCEEEECCCCc
Confidence             2699999998753

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.41  E-value=0.0039  Score=51.41  Aligned_cols=72  Identities=17%  Similarity=0.178  Sum_probs=53.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..+...     .+     +.++..|.++.+.+.++      ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~-----~~~i~gd~~~~~~l~~a------~i~   70 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SG-----ANFVHGDPTRVSDLEKA------NVR   70 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TT-----CEEEESCTTCHHHHHHT------TCT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cC-----CeEEEcCCCCHHHHHhc------Ccc
Confidence            467899998 8999999999999999 999999987654432     11     66788899887754433      123


Q ss_pred             CccEEEcCCc
Q 023896           86 KLDILTKGDA   95 (275)
Q Consensus        86 ~id~li~~ag   95 (275)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (234)
T 2aef_A           71 GARAVIVDLE   80 (234)
T ss_dssp             TCSEEEECCS
T ss_pred             hhcEEEEcCC
Confidence            6788877654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.41  E-value=0.034  Score=48.19  Aligned_cols=78  Identities=13%  Similarity=0.135  Sum_probs=53.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++++.|+|| |.+|..++..|+..+.  +|++.+++.++++..+.++.....-...+.+.. |  +           .+.
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a   69 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSD   69 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHH
Confidence            357999999 9999999999998876  899999999888876667664320001122221 1  1           112


Q ss_pred             cCCccEEEcCCcccc
Q 023896           84 FGKLDILTKGDAEVD   98 (275)
Q Consensus        84 ~g~id~li~~ag~~~   98 (275)
                      +..-|++|..+|...
T Consensus        70 ~~~aDvVii~ag~~~   84 (318)
T 1ez4_A           70 CKDADLVVITAGAPQ   84 (318)
T ss_dssp             GTTCSEEEECCCC--
T ss_pred             hCCCCEEEECCCCCC
Confidence            347899999998643

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.38  E-value=0.012  Score=51.88  Aligned_cols=78  Identities=15%  Similarity=0.183  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+++|||+|+ |++|...+..+...|+ +|+.++++.++.+.+ +++.   ..      ..+|..+.+-.++ +.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lG---a~------~vi~~~~~~~~~~-~~~~~~-  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLG---AT------HVINSKTQDPVAA-IKEITD-  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHT---CS------EEEETTTSCHHHH-HHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC---CC------EEecCCccCHHHH-HHHhcC-
Confidence            4789999995 9999998887777898 699999998876554 3332   11      1235444332222 222221 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|+++.++|.
T Consensus       257 -gg~D~vid~~g~  268 (371)
T 1f8f_A          257 -GGVNFALESTGS  268 (371)
T ss_dssp             -SCEEEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             379999999873

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.34  E-value=0.054  Score=46.85  Aligned_cols=83  Identities=19%  Similarity=0.248  Sum_probs=55.7

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      |.+...+++.|.|+ |.+|..++..|+..|.  +|++.+++.++++....++...... ...+.+.. |  +.       
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-------   69 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-------   69 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-------
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-------
Confidence            55555678999999 9999999999998774  8999999988666555555542211 00123221 1  11       


Q ss_pred             HHHHhhcCCccEEEcCCcccc
Q 023896           78 DFIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~   98 (275)
                          +.+...|++|..++...
T Consensus        70 ----~al~~aDvViia~~~~~   86 (316)
T 1ldn_A           70 ----DDCRDADLVVICAGANQ   86 (316)
T ss_dssp             ----GGTTTCSEEEECCSCCC
T ss_pred             ----HHhCCCCEEEEcCCCCC
Confidence                12347899999998644

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.34  E-value=0.0017  Score=55.33  Aligned_cols=43  Identities=16%  Similarity=0.129  Sum_probs=37.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEA   46 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~   46 (275)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.+++++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            356899999998 7999999999999999 899999999765443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.33  E-value=0.011  Score=55.42  Aligned_cols=90  Identities=14%  Similarity=0.057  Sum_probs=56.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++++++++.                   .+++.+++.+....... .+..+
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V-~v~~~  401 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLM-DATGV  401 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTC-EEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCc-EEEEe
Confidence            46789999998 8999999999999997 799998765                   45666666776654331 24444


Q ss_pred             Eecc-------cChHHHHHHHHHHHhhcCCccEEEcCCc
Q 023896           64 QLDI-------SDLASVSSLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        64 ~~Dl-------~~~~~v~~~~~~~~~~~g~id~li~~ag   95 (275)
                      ..++       .+++....-.+.+.+.+.+.|+||.+..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            4333       2211100001122222346788888754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.33  E-value=0.007  Score=53.24  Aligned_cols=74  Identities=18%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCEEEEecCCCchhHHH-HHHH-HHCCCE-EEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFET-VRQL-ASKGIT-VVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~-a~~l-~~~g~~-vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +.+|||+|+ |++|... +..+ ...|++ |+.++++.+   +.+.+ +++   +     ...+  |..+++ +.+ +.+
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---G-----a~~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---D-----ATYV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---T-----CEEE--ETTTSC-GGG-HHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---C-----Cccc--CCCccC-HHH-HHH
Confidence            489999999 9999998 7666 567997 999999887   65543 222   2     2222  555433 333 333


Q ss_pred             HHhhcCCccEEEcCCcc
Q 023896           80 IKTQFGKLDILTKGDAE   96 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~   96 (275)
                      + .  +++|+++.+.|.
T Consensus       239 ~-~--gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V-Y--EQMDFIYEATGF  252 (357)
T ss_dssp             H-S--CCEEEEEECSCC
T ss_pred             h-C--CCCCEEEECCCC
Confidence            4 2  479999999874

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.30  E-value=0.05  Score=47.29  Aligned_cols=79  Identities=8%  Similarity=0.062  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.+++.|+|| |.+|..++..|+..+.  +|++.+++.++++..+.++.....-...+.+.. |  +.           +
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~-----------~   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EY-----------S   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CH-----------H
Confidence            3467999999 9999999999998876  899999999888776666664310001122221 1  11           1


Q ss_pred             hcCCccEEEcCCcccc
Q 023896           83 QFGKLDILTKGDAEVD   98 (275)
Q Consensus        83 ~~g~id~li~~ag~~~   98 (275)
                      .+..-|++|..+|...
T Consensus        73 a~~~aDvVii~ag~~~   88 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQ   88 (326)
T ss_dssp             GGGGCSEEEECCCCC-
T ss_pred             HhCCCCEEEEcCCCCC
Confidence            1237899999998643

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.29  E-value=0.0065  Score=53.61  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=55.8

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+++.+...... ..+..+
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-v~v~~~  193 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE-ISVSEI  193 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT-SEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC-CeEEEe
Confidence            45788999998 8999999999999997 799998764                   2455555666554333 225556


Q ss_pred             EecccChHHHHHHHHHHHhhcCCccEEEcCC
Q 023896           64 QLDISDLASVSSLADFIKTQFGKLDILTKGD   94 (275)
Q Consensus        64 ~~Dl~~~~~v~~~~~~~~~~~g~id~li~~a   94 (275)
                      ..++....++       .+ +.+.|+||.+.
T Consensus       194 ~~~i~~~~~~-------~~-~~~~DlVvd~~  216 (353)
T 3h5n_A          194 ALNINDYTDL-------HK-VPEADIWVVSA  216 (353)
T ss_dssp             ECCCCSGGGG-------GG-SCCCSEEEECC
T ss_pred             ecccCchhhh-------hH-hccCCEEEEec
Confidence            6666654421       12 45788888765

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.24  E-value=0.0092  Score=55.94  Aligned_cols=61  Identities=15%  Similarity=0.090  Sum_probs=43.9

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC-------------------hhHHHHHHHHHHhcCCCCCceeEE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+++.+++.++..... ..+..+
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~-v~v~~~  402 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL-MDATGV  402 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC-cEEEEE
Confidence            45788999998 8999999999999997 78898654                   24667777777765433 124444


Q ss_pred             Eec
Q 023896           64 QLD   66 (275)
Q Consensus        64 ~~D   66 (275)
                      ..+
T Consensus       403 ~~~  405 (598)
T 3vh1_A          403 KLS  405 (598)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            433

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.23  E-value=0.0013  Score=57.97  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=35.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      +++||++.|.|. |.||..+++.|.+.|++|++.+++..+
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            578999999975 999999999999999999999988765

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.22  E-value=0.069  Score=46.15  Aligned_cols=77  Identities=12%  Similarity=0.073  Sum_probs=49.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-C--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-G--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.|+||+|.+|..++..|+.+ +  .++++.+++. +.+..+.+++.....   ..+... .++ +. .+.+       
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~---~~v~~~-~~~-~~-~~~~-------   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTA---VKIKGF-SGE-DA-TPAL-------   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSS---EEEEEE-CSS-CC-HHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCC---ceEEEe-cCC-Cc-HHHh-------
Confidence            5889999999999999999875 4  4899999987 444445566553211   222211 011 11 1112       


Q ss_pred             CCccEEEcCCcccc
Q 023896           85 GKLDILTKGDAEVD   98 (275)
Q Consensus        85 g~id~li~~ag~~~   98 (275)
                      ...|++|..||...
T Consensus        68 ~~aDivii~ag~~r   81 (312)
T 3hhp_A           68 EGADVVLISAGVAR   81 (312)
T ss_dssp             TTCSEEEECCSCSC
T ss_pred             CCCCEEEEeCCCCC
Confidence            37899999998643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.05  E-value=0.083  Score=45.57  Aligned_cols=77  Identities=17%  Similarity=0.100  Sum_probs=53.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +++.|+|+ |.+|..++..|+..+  .+|++.+++.++++..+.++.+...-...+.+.. +  +.+           .+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DL   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------Hh
Confidence            36889998 999999999999887  5899999999888876667764310001122222 1  211           13


Q ss_pred             CCccEEEcCCcccc
Q 023896           85 GKLDILTKGDAEVD   98 (275)
Q Consensus        85 g~id~li~~ag~~~   98 (275)
                      ..-|++|..+|...
T Consensus        66 ~~aD~Vii~ag~~~   79 (310)
T 2xxj_A           66 EGARAVVLAAGVAQ   79 (310)
T ss_dssp             TTEEEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998644

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.04  E-value=0.075  Score=45.96  Aligned_cols=115  Identities=11%  Similarity=0.048  Sum_probs=64.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++.+++..+.++++... ......+...|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5788997 9999999999999887  899999999877765555553210 00002222111  11           123


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ..-|++|..+|.....+   ++   -.+.+..|.--...+.+.+..+   .+.+.++++|-
T Consensus        68 ~~aDvVii~ag~~~kpG---~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtN  119 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG---MS---RDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVAN  119 (314)
T ss_dssp             TTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCS
T ss_pred             CCCCEEEECCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCC
Confidence            47899999998643221   22   2233455554433444433332   23455555554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.03  E-value=0.011  Score=52.79  Aligned_cols=43  Identities=14%  Similarity=0.135  Sum_probs=37.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+++|+|.|+ |++|..+++.+...|++|++++|+..+.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            356899999996 8999999999999999999999998776654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.03  E-value=0.0089  Score=51.67  Aligned_cols=41  Identities=27%  Similarity=0.274  Sum_probs=35.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      ++ |||+||+|++|...+..+...|++|+.++++.++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35 999999999999999988889999999999988766553

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.01  E-value=0.0058  Score=53.05  Aligned_cols=39  Identities=26%  Similarity=0.336  Sum_probs=34.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +|||+||+|++|..+++.+...|++|+.++++.++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999988888899999999988776554

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.98  E-value=0.05  Score=47.35  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.++||.|+ |++|...+..+... |++|+.++++.++.+.+. +   .+..    .+  .|..+ +..++ +.++...
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~---lGa~----~~--i~~~~-~~~~~-v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-E---VGAD----AA--VKSGA-GAADA-IRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-H---TTCS----EE--EECST-THHHH-HHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---cCCC----EE--EcCCC-cHHHH-HHHHhCC
Confidence            4789999998 99999887766666 789999999998766542 2   2221    11  23332 22222 2222211


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       .++|+++.+.|.
T Consensus       238 -~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 -QGATAVFDFVGA  249 (345)
T ss_dssp             -GCEEEEEESSCC
T ss_pred             -CCCeEEEECCCC
Confidence             279999999874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.94  E-value=0.074  Score=45.81  Aligned_cols=45  Identities=24%  Similarity=0.169  Sum_probs=37.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      +++.|+|| |.+|..++..|+..|+ +|++.++++++++....++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            47899999 9999999999999997 899999998877765555543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.89  E-value=0.12  Score=44.12  Aligned_cols=115  Identities=9%  Similarity=0.011  Sum_probs=67.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.|.|| |+||..++..|+.++.  ++++.+.+..+++..+.+|.+.... .........  .+.+           .+
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH-----------Hh
Confidence            4778895 9999999999988874  7999999998777766677642100 000222221  1221           12


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ..-|++|..||....++   ++.+   +.++.|.-=.-.+.+.+..+   .+.+.++++|-
T Consensus        68 ~~aDvVvitAG~prkpG---mtR~---dLl~~Na~I~~~i~~~i~~~---~p~aivlvvsN  119 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKPG---MTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCSS---SCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSS
T ss_pred             CCCCEEEEecCCCCCCC---CchH---HHHHHHHHHHHHHHHHHHhc---CCceEEEEecC
Confidence            36799999999654322   3433   34566655444444444332   23344444444

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.89  E-value=0.041  Score=48.81  Aligned_cols=42  Identities=12%  Similarity=0.045  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      .+++|+|.|+ |.+|..+++.+...|++|++.+|+..+++...
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5789999999 89999999999999999999999998776654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.79  E-value=0.028  Score=48.99  Aligned_cols=79  Identities=16%  Similarity=0.218  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||.|+ |++|...+..+... |++|+.+++++++.+... +   .+..      ..+|.++.+..+++.+ +...
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~---~Ga~------~~i~~~~~~~~~~v~~-~t~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-K---IGAD------VTINSGDVNPVDEIKK-ITGG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-H---TTCS------EEEEC-CCCHHHHHHH-HTTS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-h---cCCe------EEEeCCCCCHHHHhhh-hcCC
Confidence            4789999987 78887777777655 789999999998754432 2   2221      2346666554433332 2111


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       ..+|.++.+++.
T Consensus       231 -~g~d~~~~~~~~  242 (348)
T 4eez_A          231 -LGVQSAIVCAVA  242 (348)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -CCceEEEEeccC
Confidence             157778877653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.65  E-value=0.023  Score=48.19  Aligned_cols=41  Identities=10%  Similarity=0.103  Sum_probs=36.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      +++.|.|++|.+|.++++.|++.|++|++.+|+.++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999988766554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.64  E-value=0.0098  Score=50.45  Aligned_cols=44  Identities=23%  Similarity=0.367  Sum_probs=37.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      ++.+++++|.|+ |++|++++..|.+.|++|++++|+.++.+...
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            356789999997 79999999999999999999999987765543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.64  E-value=0.024  Score=48.63  Aligned_cols=42  Identities=21%  Similarity=0.219  Sum_probs=37.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~   45 (275)
                      ++.+++++|.|+ |+||+++++.|...|++|++.+|+.++.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            467899999997 999999999999999999999999876543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.63  E-value=0.02  Score=51.61  Aligned_cols=41  Identities=22%  Similarity=0.199  Sum_probs=35.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      +..|+|.|. |-+|..+++.|.+.|+.|+++++|++..+...
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            346888997 78999999999999999999999998766543

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.62  E-value=0.034  Score=50.05  Aligned_cols=72  Identities=14%  Similarity=0.081  Sum_probs=52.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+......   .+.        -..+..|..|.+.+.++++   
T Consensus        31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~a--------d~~~~~~~~d~~~l~~~a~---   95 (419)
T 4e4t_A           31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVA--------DRHLRAAYDDEAALAELAG---   95 (419)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHS--------SEEECCCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hhC--------CEEEECCcCCHHHHHHHHh---
Confidence            4567899999987 679999999999999999999876643211   111        1234578888888777763   


Q ss_pred             hhcCCccEEEc
Q 023896           82 TQFGKLDILTK   92 (275)
Q Consensus        82 ~~~g~id~li~   92 (275)
                          ++|+++.
T Consensus        96 ----~~D~V~~  102 (419)
T 4e4t_A           96 ----LCEAVST  102 (419)
T ss_dssp             ----HCSEEEE
T ss_pred             ----cCCEEEE
Confidence                5788774

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.54  E-value=0.018  Score=52.69  Aligned_cols=61  Identities=15%  Similarity=0.156  Sum_probs=48.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~   75 (275)
                      ..+++|.|+ |-+|..+++.|.++|+.|+++++|+++++.+.+.+.        +.++..|-++++-+++
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~--------~~~i~Gd~~~~~~L~~   63 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD--------LRVVNGHASHPDVLHE   63 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS--------CEEEESCTTCHHHHHH
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC--------cEEEEEcCCCHHHHHh
Confidence            356888888 799999999999999999999999988776654431        5667778777776444

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.52  E-value=0.034  Score=50.37  Aligned_cols=79  Identities=22%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeEEE
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFHQ   64 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~   64 (275)
                      ++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+++.++...... .+..+.
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v-~v~~~~  116 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNC-NVVPHF  116 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTC-CCEEEE
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCC-EEEEEe
Confidence            5678999998 8999999999999997 788886432                   34556666666543321 255555


Q ss_pred             ecccChHHHHHHHHHHHhhcCCccEEEcCC
Q 023896           65 LDISDLASVSSLADFIKTQFGKLDILTKGD   94 (275)
Q Consensus        65 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~a   94 (275)
                      .++.+..  ..++       ...|+||.+.
T Consensus       117 ~~i~~~~--~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          117 NKIQDFN--DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             SCGGGBC--HHHH-------TTCSEEEECC
T ss_pred             cccchhh--HHHh-------cCCCEEEECC
Confidence            5555432  1222       3678888764

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.51  E-value=0.023  Score=48.12  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      .+++++|.|+ ||.|++++..|++.|+ +|.++.|+.++++..++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999996 8999999999999997 7999999999888877665

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.44  E-value=0.025  Score=47.47  Aligned_cols=46  Identities=26%  Similarity=0.327  Sum_probs=39.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++++ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+...+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            3567 8999997 78999999999999999999999998777666544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.42  E-value=0.032  Score=47.69  Aligned_cols=42  Identities=21%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~   45 (275)
                      ++.+++++|.|+ |+||+++++.|...|++|++.+|+..+.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            467999999996 899999999999999999999999876443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.40  E-value=0.059  Score=46.56  Aligned_cols=42  Identities=17%  Similarity=0.287  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      ..+++.|.|. |.+|..+++.|++.|++|++.+|++++.+...
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            3457888866 99999999999999999999999998776654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.38  E-value=0.098  Score=43.53  Aligned_cols=77  Identities=13%  Similarity=0.093  Sum_probs=55.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++.|.|++|.+|+.+++.+.+. +++|+........++...    ...     .. +.+|++.++.+...++.+.+.  +
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~~-----~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DGN-----TE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HTT-----CC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----ccC-----Cc-EEEEccChHHHHHHHHHHHHc--C
Confidence            5899999999999999999865 888886543333333222    111     22 568999999988888776665  7


Q ss_pred             ccEEEcCCcc
Q 023896           87 LDILTKGDAE   96 (275)
Q Consensus        87 id~li~~ag~   96 (275)
                      +++|+...|.
T Consensus        70 ~~~VigTTG~   79 (245)
T 1p9l_A           70 IHAVVGTTGF   79 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEcCCCC
Confidence            8889888774

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.35  E-value=0.061  Score=47.62  Aligned_cols=80  Identities=18%  Similarity=0.045  Sum_probs=49.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-----EEEEEecCh----hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI-----TVVLTARDE----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~-----~vi~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~   76 (275)
                      ..+|.|+||+|+||.+++..|+..+.     .|++.+.+.    ++++..+.+|+.....-  ..  ...+...+     
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~--~~--~v~i~~~~-----  102 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL--LR--EVSIGIDP-----  102 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EE--EEEEESCH-----
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh--cC--CcEEecCC-----
Confidence            45799999999999999999998764     277765433    34555556666432211  11  12222211     


Q ss_pred             HHHHHhhcCCccEEEcCCcccc
Q 023896           77 ADFIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        77 ~~~~~~~~g~id~li~~ag~~~   98 (275)
                          .+.+...|++|..||...
T Consensus       103 ----y~~~~daDvVVitag~pr  120 (375)
T 7mdh_A          103 ----YEVFEDVDWALLIGAKPR  120 (375)
T ss_dssp             ----HHHTTTCSEEEECCCCCC
T ss_pred             ----HHHhCCCCEEEEcCCCCC
Confidence                122347899999988643

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.34  E-value=0.14  Score=44.10  Aligned_cols=75  Identities=15%  Similarity=0.125  Sum_probs=50.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhc---CCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++.|+|| |.+|..++..|+..+. +|++.+++.++++..+.++...   ....  ..+...  .+.+           .
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~--~~i~~t--~d~~-----------a   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVD--IRISGS--NSYE-----------D   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCC--CCEEEE--SCGG-----------G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCC--eEEEEC--CCHH-----------H
Confidence            3678998 9999999999998887 6999999988877655555432   1111  222220  1211           1


Q ss_pred             cCCccEEEcCCcccc
Q 023896           84 FGKLDILTKGDAEVD   98 (275)
Q Consensus        84 ~g~id~li~~ag~~~   98 (275)
                      +...|++|..+|...
T Consensus        65 ~~~aD~Vi~~ag~~~   79 (308)
T 2d4a_B           65 MRGSDIVLVTAGIGR   79 (308)
T ss_dssp             GTTCSEEEECCSCCC
T ss_pred             hCCCCEEEEeCCCCC
Confidence            237899999988644

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.33  E-value=0.024  Score=49.48  Aligned_cols=69  Identities=25%  Similarity=0.330  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+|+ |++|...+..+...|++|++++++.++.+.+. +   .+..   . ++    ++.+.+.+         
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~---~-v~----~~~~~~~~---------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-S---MGVK---H-FY----TDPKQCKE---------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-H---TTCS---E-EE----SSGGGCCS---------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-h---cCCC---e-ec----CCHHHHhc---------
Confidence            5789999997 99999998888888999999999998766442 2   2221   1 22    33332211         


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                       ++|+++.+.|.
T Consensus       234 -~~D~vid~~g~  244 (348)
T 3two_A          234 -ELDFIISTIPT  244 (348)
T ss_dssp             -CEEEEEECCCS
T ss_pred             -CCCEEEECCCc
Confidence             79999999874

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.30  E-value=0.18  Score=43.55  Aligned_cols=42  Identities=29%  Similarity=0.287  Sum_probs=36.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++.|.|+ |.+|..++..|+..|+  +|++.++++++++.....+
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l   45 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDL   45 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHH
Confidence            5788998 9999999999999999  9999999988777655444

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.26  E-value=0.044  Score=46.90  Aligned_cols=40  Identities=28%  Similarity=0.243  Sum_probs=35.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      ++|.|.|+ |.+|.+++..|++.|++|++.+|++++++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            56888888 89999999999999999999999998776643

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.21  E-value=0.11  Score=43.38  Aligned_cols=91  Identities=15%  Similarity=0.190  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhc-CCC----CCceeEEEecccChHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKAS-GVD----PELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~-~~~----~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      .+.++.|.|+ |.+|..++..|++.|++ |.+.+|++++.+...+.+.-. ...    .....++..-+ ....+..+++
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~   86 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQ   86 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHH
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHH
Confidence            3457888997 99999999999999998 889999998877665542100 000    00112222222 2335566777


Q ss_pred             HHHhhcCCccEEEcCCccc
Q 023896           79 FIKTQFGKLDILTKGDAEV   97 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~   97 (275)
                      ++.....+=.+++++.+..
T Consensus        87 ~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHTTCCTTCEEEECCTTS
T ss_pred             HHHhhcCCCcEEEECCCCC
Confidence            6655443334677766443

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=95.19  E-value=0.3  Score=41.82  Aligned_cols=37  Identities=24%  Similarity=0.290  Sum_probs=33.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGL   44 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~   44 (275)
                      +++.|.|+ |.+|..++..|+..|+  +|++.+|+.++++
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            57899998 9999999999999998  9999999987665

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=95.19  E-value=0.036  Score=48.05  Aligned_cols=49  Identities=24%  Similarity=0.253  Sum_probs=37.0

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      |....-++|.|.|| |-+|..+|..++..|++|++.+.+++.++...+.+
T Consensus         1 Ma~p~~~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i   49 (319)
T 3ado_A            1 MASPAAGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENI   49 (319)
T ss_dssp             ------CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence            55666678888888 89999999999999999999999998766554433

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.17  E-value=0.57  Score=37.34  Aligned_cols=101  Identities=11%  Similarity=0.059  Sum_probs=65.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+||-.|++.|.   ++..|++.+.+|+.++.++...+.+.+.+...+.. .++.++..|+.+.-          ...
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~----------~~~  120 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLS-PRMRAVQGTAPAAL----------ADL  120 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCTTGGG----------TTS
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEeCchhhhc----------ccC
Confidence            46788988887653   34445555889999999999888777766554332 13888888876521          122


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      +.+|+++.+.+.                       ..- +++.+...++  ++|++++.+.
T Consensus       121 ~~~D~v~~~~~~-----------------------~~~-~l~~~~~~Lk--pgG~lv~~~~  155 (204)
T 3njr_A          121 PLPEAVFIGGGG-----------------------SQA-LYDRLWEWLA--PGTRIVANAV  155 (204)
T ss_dssp             CCCSEEEECSCC-----------------------CHH-HHHHHHHHSC--TTCEEEEEEC
T ss_pred             CCCCEEEECCcc-----------------------cHH-HHHHHHHhcC--CCcEEEEEec
Confidence            478999876532                       111 4555556553  5678877665

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.17  E-value=0.013  Score=52.72  Aligned_cols=46  Identities=24%  Similarity=0.263  Sum_probs=38.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEE-EEec----------ChhHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVV-LTAR----------DEKRGLEAVEK   49 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi-~~~r----------~~~~~~~~~~~   49 (275)
                      ++++++|+|+| .|.+|..+++.|.+.|++|+ +.++          +.+.+.+..++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            57899999999 69999999999999999999 7777          66666555543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.16  E-value=0.31  Score=41.84  Aligned_cols=42  Identities=24%  Similarity=0.176  Sum_probs=35.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCEEEEEecChhHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~--g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++.|.|+ |.+|..++..|+..  |++|++.++++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l   45 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhH
Confidence            5788998 99999999999985  789999999998777554344

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.12  E-value=0.055  Score=46.32  Aligned_cols=42  Identities=10%  Similarity=0.112  Sum_probs=35.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      .+++.|.|. |.+|..+++.|++.|++|++.+|++++.+...+
T Consensus         7 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            7 DFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            356777764 899999999999999999999999988776544

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.11  E-value=0.032  Score=49.00  Aligned_cols=81  Identities=17%  Similarity=0.258  Sum_probs=52.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecC-------------------hhHHHHHHHHHHhcCCCCCceeE
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLF   62 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   62 (275)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+++.+++.+++..... .+..
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v-~v~~  110 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMV-DVKV  110 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTS-EEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCe-EEEE
Confidence            356789999997 7999999999999997 78888532                   235666777777654331 2444


Q ss_pred             EEecccChHHHHHHHHHHHhhcCCccEEEcCC
Q 023896           63 HQLDISDLASVSSLADFIKTQFGKLDILTKGD   94 (275)
Q Consensus        63 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~a   94 (275)
                      +..++.+  ....+       +...|+||.+.
T Consensus       111 ~~~~~~~--~~~~~-------~~~~dvVv~~~  133 (346)
T 1y8q_A          111 DTEDIEK--KPESF-------FTQFDAVCLTC  133 (346)
T ss_dssp             ECSCGGG--CCHHH-------HTTCSEEEEES
T ss_pred             EecccCc--chHHH-------hcCCCEEEEcC
Confidence            4444432  11122       23677777653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.11  E-value=0.069  Score=47.76  Aligned_cols=42  Identities=14%  Similarity=0.117  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      .+.+|+|.|+ |.+|..+++.+...|++|++++++..+.+...
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5688999999 89999999999999999999999998766553

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.10  E-value=0.042  Score=52.00  Aligned_cols=64  Identities=20%  Similarity=0.225  Sum_probs=44.2

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh-------------------hHHHHHHHHHHhcCCCCCceeEE
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (275)
                      +.+.+|+|.|+ ||||..+++.|+..|. ++++++.+.                   .+++.+++.+...... ..+..+
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~-v~V~a~   92 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPK-ANIVAY   92 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTT-CEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            45678999998 8999999999999997 788887543                   2345555666554332 235555


Q ss_pred             EecccC
Q 023896           64 QLDISD   69 (275)
Q Consensus        64 ~~Dl~~   69 (275)
                      ..+++.
T Consensus        93 ~~~i~~   98 (640)
T 1y8q_B           93 HDSIMN   98 (640)
T ss_dssp             ESCTTS
T ss_pred             ecccch
Confidence            555543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.08  E-value=0.14  Score=43.39  Aligned_cols=86  Identities=10%  Similarity=0.006  Sum_probs=54.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC---EEEEEecChhHHHHHHHHHHhc--CC-----CCCceeEEEecccChHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKAS--GV-----DPELLLFHQLDISDLASVSS   75 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~---~vi~~~r~~~~~~~~~~~l~~~--~~-----~~~~~~~~~~Dl~~~~~v~~   75 (275)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|++++.+...+...-.  ..     ....+.++.+   .+..+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356777887 9999999999999998   8999999998877765431100  00     0001333322   3456667


Q ss_pred             HHHHHHhh-cCCccEEEcCCc
Q 023896           76 LADFIKTQ-FGKLDILTKGDA   95 (275)
Q Consensus        76 ~~~~~~~~-~g~id~li~~ag   95 (275)
                      +++++... +.+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77776654 433236666554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.06  E-value=0.026  Score=47.94  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=33.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      +++||.++|.|+++-+|+.++..|+..|++|.++.|.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999999999999999999999999998753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.06  E-value=0.025  Score=47.40  Aligned_cols=41  Identities=20%  Similarity=0.281  Sum_probs=35.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEA   46 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~   46 (275)
                      +++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            356 8999997 8999999999999998 899999998765544

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=94.95  E-value=0.045  Score=47.74  Aligned_cols=41  Identities=29%  Similarity=0.185  Sum_probs=35.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      +++.|.|+ |.+|..++..|++.|++|++++|++++.+...+
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   45 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   45 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHh
Confidence            57888887 899999999999999999999999887666544

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=94.94  E-value=0.048  Score=59.63  Aligned_cols=81  Identities=11%  Similarity=0.131  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||.||+||+|...+......|++|++++++.++.+...+.....+..    .  ..|..+.+-    .+++.+..
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~----~--v~~~~~~~~----~~~i~~~t 1736 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET----C--FANSRDTSF----EQHVLRHT 1736 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST----T--EEESSSSHH----HHHHHHTT
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce----E--EecCCCHHH----HHHHHHhc
Confidence            5789999999999999998887788999999999887765554322111111    1  124444332    23333322


Q ss_pred             --CCccEEEcCCc
Q 023896           85 --GKLDILTKGDA   95 (275)
Q Consensus        85 --g~id~li~~ag   95 (275)
                        .++|+++++.+
T Consensus      1737 ~g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1737 AGKGVDLVLNSLA 1749 (2512)
T ss_dssp             TSCCEEEEEECCC
T ss_pred             CCCCceEEEECCC
Confidence              25899988654

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=94.92  E-value=0.17  Score=46.44  Aligned_cols=43  Identities=23%  Similarity=0.217  Sum_probs=36.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      -++|.|.|+ |-+|.+++..|++.|++|++.++++++++...+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            445666666 8999999999999999999999999988776554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.84  E-value=0.11  Score=44.40  Aligned_cols=84  Identities=8%  Similarity=-0.034  Sum_probs=55.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH-------HHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-------LKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      +++.|.| .|.+|..+++.|++.|++|++.+|++++.+...+.       +.+..   . ..++..-+.+...++..+++
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~---~-aDvvi~~vp~~~~~~~v~~~   90 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVA---A-ADLIHITVLDDAQVREVVGE   90 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHT---T-SSEEEECCSSHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHH---h-CCEEEEECCChHHHHHHHHH
Confidence            4677777 48999999999999999999999999876665431       01100   0 22333445556677777777


Q ss_pred             HHhhcCCccEEEcCCc
Q 023896           80 IKTQFGKLDILTKGDA   95 (275)
Q Consensus        80 ~~~~~g~id~li~~ag   95 (275)
                      +.....+=.++|+...
T Consensus        91 l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           91 LAGHAKPGTVIAIHST  106 (296)
T ss_dssp             HHTTCCTTCEEEECSC
T ss_pred             HHHhcCCCCEEEEeCC
Confidence            7665544456666654

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=94.83  E-value=0.029  Score=51.33  Aligned_cols=42  Identities=17%  Similarity=0.068  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-----CCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASK-----GITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~-----g~~vi~~~r~~~~~~~~   46 (275)
                      +.+++.|.||+++.|.+++..|+.+     +.+|++.++++++++..
T Consensus        27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~   73 (472)
T 1u8x_X           27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRI   73 (472)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHH
Confidence            4557888899887788888889987     67899999999887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	275
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-50
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-41
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-33
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-33
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-32
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-31
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-31
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-28
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-28
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-28
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-28
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-27
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-27
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-26
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-26
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	7e-26
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	8e-26
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-25
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-25
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-25
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	3e-25
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-25
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-24
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-24
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-24
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-24
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-24
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-24
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-24
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-24
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-24
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	8e-24
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-23
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-23
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-23
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-23
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-22
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-22
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-22
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-22
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	6e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	7e-22
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-21
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-21
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-21
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-19
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-19
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-05
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-18
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-17
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-06
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-16
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-15
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-15
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-14
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-13
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-13
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-13
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-11
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-10
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-10
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	8e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	9e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	6e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.001
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.003
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 5e-50
 Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 19/280 (6%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
              A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQ
Sbjct: 3   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQ 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           LDI DL S+ +L DF++ ++G LD+L                +  A   +KTN++GT+  
Sbjct: 60  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 119

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR--AVLGDVENLTEERIEMVVKDYFKD 182
           C  L+PL++     R+VN+SS + +++ L   +         E +TEE +  ++  + +D
Sbjct: 120 CTELLPLIK--PQGRVVNVSS-IMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY------PKFCVNCVCPGFVKTDIN 236
            ++G     GW   SSAY V+K  +   +RI A++        K  +N  CPG+V+TD+ 
Sbjct: 177 TKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 234

Query: 237 FHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAP 274
                 S EEGAE+PV LALLP    GP G+F   K    
Sbjct: 235 GPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 274

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  140 bits (354), Expect = 2e-41
 Identities = 58/273 (21%), Positives = 97/273 (35%), Gaps = 37/273 (13%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    VVTG+N+GIG   V+QL        ++ TARD ++    ++ +K S V       
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK-ATELKSIKDSRVH-----V 55

Query: 63  HQLDISDLASVSSLADFIKTQFGK--LDIL-TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
             L ++   S+ +    +    G   L +L       + +         +  E L  N  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                 + L+PLL+ + S    +  S                             V+   
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLS------------------------VSRAAVITIS 151

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINF 237
                  +  +        AY++SKA IN + R LA         V   CPG+V+T++  
Sbjct: 152 SGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG 211

Query: 238 HAGILSVEEGAESPVKLALLPDGGPTGRFFLRK 270
               L+VE+     +      D    GRFF+R 
Sbjct: 212 KNAALTVEQSTAELISSFNKLDNSHNGRFFMRN 244

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  119 bits (299), Expect = 5e-33
 Identities = 55/266 (20%), Positives = 88/266 (33%), Gaps = 49/266 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +     D
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDIL----TKGDAEVDWSKVCYQTYELAVECLKTNYYGTK 122
           ++  A    +      +FGKLDIL         +        Q+ E     L  N     
Sbjct: 66  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
              +  +P L  +    +   S                                      
Sbjct: 126 ALTKKAVPHLSSTKGEIVNISSI------------------------------------- 148

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAG 240
                 +     P    Y ++KA I+ YTR  A    +    VN + PG V T      G
Sbjct: 149 -----ASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG 203

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRF 266
            +  E   +    +A + +  P G  
Sbjct: 204 -MPEETSKKFYSTMATMKECVPAGVM 228

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 7e-33
 Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 48/266 (18%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     + A+VTG++ GIG    R L  +G+ VV  AR      E   + K++G     L
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-L 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
           + ++ D+S+   + S+   I++Q   +DI            +   +     +    N   
Sbjct: 64  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 123

Query: 121 TKQTCEALIPLLEL--SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
                      ++    D   ++N++S +S  + LP                        
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININS-MSGHRVLPL----------------------- 159

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF----CVNCVCPGFVKTD 234
                             +  Y  +K  + A T  L +   +        C+ PG V+T 
Sbjct: 160 ----------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 203

Query: 235 INFHAGILSVEEGAES-PVKLALLPD 259
             F       E+ A +      L P+
Sbjct: 204 FAFKLHDKDPEKAAATYEQMKCLKPE 229

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  116 bits (292), Expect = 5e-32
 Identities = 48/268 (17%), Positives = 86/268 (32%), Gaps = 60/268 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG  +G+G E  RQ  + G  VVL    ++ G     +L  +        +  LD
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA------RYQHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++       +  + + +FG +D L           +  ++ E   + ++ N  G     +
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            +IP ++ +    +VN+SS                                         
Sbjct: 120 TVIPAMKDAGGGSIVNISS----------------------------------------- 138

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGILSV 244
             A       +S+Y  SK  +   +++ A         VN V PG   T +    GI   
Sbjct: 139 -AAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG 197

Query: 245 EEGAESPVKLALLPDGGPTGRFFLRKEE 272
           E    +           P GR      E
Sbjct: 198 EGNYPNT----------PMGRVGNEPGE 215

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 1e-31
 Identities = 46/262 (17%), Positives = 77/262 (29%), Gaps = 55/262 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG+  GIG  T  + A     +VL   ++    E   K K  G     +    +D
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
            S+   + S A  +K + G + IL      V  S +         +  + N      T +
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 124

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A +P +  ++   +V ++S                                         
Sbjct: 125 AFLPAMTKNNHGHIVTVAS----------------------------------------- 143

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC-----VNCVCPGFVKTDINFHAGI 241
             A     P   AY  SK     + + L               C+CP FV T    +   
Sbjct: 144 -AAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST 202

Query: 242 -----LSVEEGAESPVKLALLP 258
                L  EE     +   L  
Sbjct: 203 SLGPTLEPEEVVNRLMHGILTE 224

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  115 bits (289), Expect = 2e-31
 Identities = 51/264 (19%), Positives = 85/264 (32%), Gaps = 47/264 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +     D
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDIL--TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           +++ +    + +    +FGK+DIL    G    D +    Q  EL  +  K N+    + 
Sbjct: 65  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +                                               ++         
Sbjct: 125 TQKTKEH------------------------------------------LIKTKGEIVNV 142

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGIL 242
              +A          Y  +KA ++ YTR  A    +    VN V PG V T     A  L
Sbjct: 143 SSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF-MGAMGL 201

Query: 243 SVEEGAESPVKLALLPDGGPTGRF 266
                 +    +    +  P G  
Sbjct: 202 PETASDKLYSFIGSRKECIPVGHC 225

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  106 bits (266), Expect = 2e-28
 Identities = 56/279 (20%), Positives = 88/279 (31%), Gaps = 60/279 (21%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPE 58
           K   ++TG+ KGIG     + A            +VL++R      +   + +A G   +
Sbjct: 1   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD 60

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNY 118
                  DISD+A V  L   I  ++G +D L        +  +   T E     + TN 
Sbjct: 61  ---TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL 117

Query: 119 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKD 178
            GT    +AL  L+E   S  +  ++                                  
Sbjct: 118 KGTFFLTQALFALMERQHSGHIFFIT---------------------------------- 143

Query: 179 YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
                    +A      HSS Y +SK         +     K    +  V PG V T + 
Sbjct: 144 --------SVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW 195

Query: 237 ------FHAGILSVEEGAESPVKLALLPDGGPTGRFFLR 269
                   A ++  E+ A   V+  L P         LR
Sbjct: 196 GKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILR 234

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  107 bits (267), Expect = 2e-28
 Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 46/263 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+         D
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +  +  + +L   +  ++G +D+L                 EL ++ ++TN  G  +  +
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 119

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            ++                                            M+ +   +     
Sbjct: 120 QVLK----------------------------------------AGGMLERGTGRIVNIA 139

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHA-GILS 243
               +    H++ Y  SK  +  +T+ L     +    VN VCPGFV+T +        S
Sbjct: 140 STGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYS 199

Query: 244 VEEGAESPVKLALLPDGGPTGRF 266
                 +      +    P GR+
Sbjct: 200 DIWEVSTEEAFDRITARVPIGRY 222

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  106 bits (266), Expect = 3e-28
 Identities = 47/234 (20%), Positives = 85/234 (36%), Gaps = 47/234 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +      +  D
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---SSGYAGD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +S    +S + + I T+   +DIL         +       +   + L+TN        +
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            +   +  +   R++N+SS                                         
Sbjct: 128 PISKRMINNRYGRIINISS----------------------------------------- 146

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFH 238
            I         + Y  SKA +  +T+ LAK        VN + PGF+ +D+   
Sbjct: 147 -IVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK 199

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  105 bits (263), Expect = 7e-28
 Identities = 44/262 (16%), Positives = 70/262 (26%), Gaps = 57/262 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  +GIG    +  A +G  V L     + G E  E +  +        F Q+D
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA--------FFQVD 56

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D        +      G++D+L    A                  L+ N         
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                +       +VN++S                                         
Sbjct: 117 LAAREMRKVGGGAIVNVAS----------------------------------------- 135

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSV 244
            +        ++AY  SK  +   TR LA         VN V PG + T+    A    +
Sbjct: 136 -VQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA----I 190

Query: 245 EEGAESPVKLALLPDGGPTGRF 266
               +         D     R 
Sbjct: 191 ALSPDPERTRRDWEDLHALRRL 212

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 54/266 (20%), Positives = 89/266 (33%), Gaps = 49/266 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +     D
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE----CLKTNYYGTK 122
           ++       + +    QFGK+D+L                 +  ++     LK N     
Sbjct: 66  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
           +  + + P L  S    +   S                                      
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSI------------------------------------- 148

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAG 240
                +A     P    Y ++KA ++ YTR  A    KF   VN V PG V+T    +A 
Sbjct: 149 -----VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT-NAM 202

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRF 266
            +  +   +    +A   +  P G  
Sbjct: 203 GMPDQASQKFYNFMASHKECIPIGAA 228

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  104 bits (259), Expect = 3e-27
 Identities = 50/235 (21%), Positives = 78/235 (33%), Gaps = 40/235 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  +VTG N+GIG    R +A+ G  V +  R     +E  EK+ K  GV       +Q 
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK---TKAYQC 66

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D+S+   V+     I    G +  L               T+E        N +G   TC
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
            A+  L         + ++S +S+                                  + 
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSS----------------------------------QI 152

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFH 238
              ++         Y  SKA  +   + LA  +      VN + PG+V TD   H
Sbjct: 153 INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH 207

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  101 bits (252), Expect = 3e-26
 Identities = 45/264 (17%), Positives = 75/264 (28%), Gaps = 47/264 (17%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG     +L   G  V +   ++        ++  +G      +  ++
Sbjct: 1   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA---VAVKV 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D+SD   V +  +  +   G  D++         + +   T E+  +    N  G     
Sbjct: 58  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGI 117

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +A +                                                   K    
Sbjct: 118 QAAVE-----------------------------------------AFKKEGHGGKIINA 136

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILS 243
              A     P  + Y  SK  +   T+  A+        VN  CPG VKT +        
Sbjct: 137 CSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQV 196

Query: 244 VE-EGAESPVKLALLPDGGPTGRF 266
            E  G       A        GR 
Sbjct: 197 SEAAGKPLGYGTAEFAKRITLGRL 220

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  100 bits (251), Expect = 4e-26
 Identities = 49/255 (19%), Positives = 75/255 (29%), Gaps = 53/255 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG     +   +G  V++T R    G +A + +         + F Q D
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----IQFFQHD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
            SD    + L D  +  FG +  L           V   T     + L  N  G      
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 127 ALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
             I  ++       ++N+SS                                        
Sbjct: 123 LGIQRMKNKGLGASIINMSS---------------------------------------- 142

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFHAGI 241
             I      P   AY  SK  +   ++  A           VN V PG++KT       +
Sbjct: 143 --IEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP--LVDDL 198

Query: 242 LSVEEGAESPVKLAL 256
              EE      K  +
Sbjct: 199 PGAEEAMSQRTKTPM 213

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 7e-26
 Identities = 52/267 (19%), Positives = 80/267 (29%), Gaps = 60/267 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L     +P+  LF Q D
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D   +      +   FG+LDIL       +               L+ N         
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEK--------TLQINLVSVISGTY 114

Query: 127 ALIPLL---ELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +  +      +   ++N+SS                                      
Sbjct: 115 LGLDYMSKQNGGEGGIIINMSS-------------------------------------- 136

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRI--LAKRYPKF--CVNCVCPGFVKTDINFHA 239
               +A          Y  SK  I  +TR   LA         +N +CPGFV T I    
Sbjct: 137 ----LAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL--E 190

Query: 240 GILSVEEGAESPVKLALLPDGGPTGRF 266
            I   E   +       + D       
Sbjct: 191 SIEKEENMGQYIEYKDHIKDMIKYYGI 217

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  100 bits (248), Expect = 8e-26
 Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 34/266 (12%)

Query: 7   KYAVVTGSNKGIGFETVRQL---ASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG N+G+G   V+ L         +  T R+ ++  + +E L  +  +  +L   
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-AKELEDLAKNHSNIHILEID 61

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
             +      + +  + +    G   +          +++     +  ++ L+TN      
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
             +A +PLL+ +                                    + +         
Sbjct: 122 LAKACLPLLKKAAKANESQ----------------------------PMGVGRAAIINMS 153

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGI 241
                          AY+ SK+ +NA T+ L+            + PG+VKTD+   +  
Sbjct: 154 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP 213

Query: 242 LSVEEGAESPVKLALLPDGGPTGRFF 267
           L V       V+          G F 
Sbjct: 214 LDVPTSTGQIVQTISKLGEKQNGGFV 239

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 99.3 bits (247), Expect = 2e-25
 Identities = 38/235 (16%), Positives = 68/235 (28%), Gaps = 58/235 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +   +  GIG +T R+L  + +   +     +    A+ +LKA       + FH  D
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVN-ITFHTYD 63

Query: 67  IS-DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           ++  +A    L   I  Q   +DI          +             +  N+ G   T 
Sbjct: 64  VTVPVAESKKLLKKIFDQLKTVDI--------LINGAGILDDHQIERTIAINFTGLVNTT 115

Query: 126 EALIPLLELSDSP---RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
            A++   +         + N+ S                                     
Sbjct: 116 TAILDFWDKRKGGPGGIIANICS------------------------------------- 138

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI 235
                +           Y  SKA + ++T  LAK  P        + PG  +T +
Sbjct: 139 -----VTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 98.6 bits (245), Expect = 3e-25
 Identities = 45/232 (19%), Positives = 74/232 (31%), Gaps = 53/232 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+  GIG  T+   A +G  +V    +E    EA E + A  V         +D
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV--------VMD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D ASV           G+LD +         +       E     L+ N  G+    +
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A    +   +   +V  +S                                         
Sbjct: 118 AASEAMREKNPGSIVLTAS----------------------------------------- 136

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
                G     + Y  S A +   TR LA    ++   VN + PGF++T + 
Sbjct: 137 -RVYLGNLGQ-ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMT 186

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 98.4 bits (245), Expect = 3e-25
 Identities = 49/262 (18%), Positives = 80/262 (30%), Gaps = 57/262 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG   GIG     + A +G  + +         EA   ++  G     +L  + D
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---VLTVKCD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +S    V +    + + FG+ DIL               T+E   +  + N        +
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A +P ++ +   R++NL+S                                         
Sbjct: 121 AFVPGMKRNGWGRIINLTSTTY-------------------------------------- 142

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSV 244
                      + Y  +KA    +TR LA    K    VN + P  V+T           
Sbjct: 143 ----WLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATT-------- 190

Query: 245 EEGAESPVKLALLPDGGPTGRF 266
           E  A S +   L        R 
Sbjct: 191 EASALSAMFDVLPNMLQAIPRL 212

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 98.7 bits (245), Expect = 3e-25
 Identities = 50/283 (17%), Positives = 86/283 (30%), Gaps = 66/283 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K  V+TGS+ G+G     + A++   VV+  R ++    +V E++K  G +    +  + 
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---AIAVKG 64

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           D++  + V +L      +FGKLD++       +       +     + + TN  G     
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
              I                                            +           
Sbjct: 125 REAIK-----------------------------------------YFVENDIKGTVINM 143

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILS 243
             +  +   P    Y  SK  +   T  LA  Y      VN + PG + T IN       
Sbjct: 144 SSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN------- 196

Query: 244 VEEGAESPVKLALLPDGGPTGRF-----------FLRKEEAPF 275
             E    P + A +    P G             +L   EA +
Sbjct: 197 -AEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 98.3 bits (244), Expect = 6e-25
 Identities = 52/266 (19%), Positives = 81/266 (30%), Gaps = 52/266 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++   +     E V   +K +G D       + 
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKA 75

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           ++  +  +  + +     FGKLDI+      V +  V   T E        N  G     
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 135

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
                 LE+     L+   +                                        
Sbjct: 136 REAYKHLEIGGRLILMGSIT---------------------------------------- 155

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN---FHAG 240
                    P  + Y  SK  I  + R +A         VN V PG +KTD+        
Sbjct: 156 ---GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREY 212

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRF 266
           I + E  +   V         P  R 
Sbjct: 213 IPNGENLSNEEVDEYAAVQWSPLRRV 238

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.9 bits (241), Expect = 1e-24
 Identities = 51/257 (19%), Positives = 84/257 (32%), Gaps = 53/257 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG  +GIG   VR   + G  VV+  +DE  G    ++L  +       +F   D
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA-------VFILCD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVE-CLKTNYYGTKQTC 125
           ++    V +L      +FG+LD +          +   +T        L+ N  GT    
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +  +P L       ++N+SS                                        
Sbjct: 120 KLALPYLR-KSQGNVINISS---------------------------------------- 138

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILS 243
             +        +  Y  +K  + A T+ LA     +   VNC+ PG + T +      L 
Sbjct: 139 --LVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM 196

Query: 244 VEEGAESPVKLALLPDG 260
            +  A     +   P G
Sbjct: 197 PDPRASIREGMLAQPLG 213

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 96.6 bits (240), Expect = 2e-24
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G E V+ L  +G  V  +  +E  G +   +L          +F + D
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS------MFVRHD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +S  A  + +   ++ + G L++L      +    +     E     LK N       C+
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
             I  ++      ++N++S                                         
Sbjct: 121 QGIAAMK-ETGGSIINMAS----------------------------------------- 138

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDI 235
            +++       + Y  SKA ++A TR  A           VN + P  + T +
Sbjct: 139 -VSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 97.0 bits (241), Expect = 2e-24
 Identities = 43/266 (16%), Positives = 74/266 (27%), Gaps = 55/266 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G   V +  ++G  V +  +  +R  E       +      +L    D
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------VLGIVGD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
           +  L      A     +FGK+D L         +                E    N  G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 122 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFK 181
               +A +P L  S    +  +S+                                    
Sbjct: 120 IHAVKACLPALVASRGNVIFTISNA----------------------------------- 144

Query: 182 DYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-CVNCVCPGFVKTDINFHAG 240
               G   N         Y  +K  I    R LA     +  VN V  G + +D+   + 
Sbjct: 145 ----GFYPN----GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSS 196

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRF 266
           +    +   +     +L    P GR 
Sbjct: 197 LGMGSKAISTVPLADMLKSVLPIGRM 222

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 96.3 bits (239), Expect = 2e-24
 Identities = 43/255 (16%), Positives = 79/255 (30%), Gaps = 54/255 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+V+G  +G+G   VR + ++G  VV     ++ G     +L  +        +  LD
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA------RYVHLD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++  A   +  D   T FG L +L      ++   +           L  N  G      
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  ++ +    ++N+SS                                         
Sbjct: 121 AVVKPMKEAGRGSIINISSIE--------------------------------------- 141

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSV 244
                        Y  +K  +   T+  A         VN + PG VKT +         
Sbjct: 142 ---GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP---- 194

Query: 245 EEGAESPVKLALLPD 259
           E+  ++ +  A  P 
Sbjct: 195 EDIFQTALGRAAEPV 209

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 96.4 bits (239), Expect = 2e-24
 Identities = 52/264 (19%), Positives = 90/264 (34%), Gaps = 47/264 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVVTGS  GIG      LA++G  +VL    +   +E V    A+    + +L+   D
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +S   +V  L D    Q G++DIL         + +     E     L  N         
Sbjct: 64  LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A +P ++     R++N++                                          
Sbjct: 124 AALPHMKKQGFGRIINIA------------------------------------------ 141

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI--NFHAGIL 242
                    + SAY  +K  +  +T++ A          N +CPG+V+T +     + + 
Sbjct: 142 SAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALA 201

Query: 243 SVEEGAESPVKLALLPDGGPTGRF 266
                 +      LL +  P+ +F
Sbjct: 202 EKNGVDQETAARELLSEKQPSLQF 225

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 3e-24
 Identities = 47/264 (17%), Positives = 89/264 (33%), Gaps = 53/264 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE--LLLFHQ 64
           + A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+A+    +   ++  Q
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            +I +   V++L       FGK++ L         S   + + +     L+TN  GT   
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 132

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
           C+A+                                               +K++     
Sbjct: 133 CKAVYS-------------------------------------------SWMKEHGGSIV 149

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGIL 242
              +  +   P +     ++A +   T+ LA  +      +NCV PG + +         
Sbjct: 150 NIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS 209

Query: 243 SVEEGAESPVKLALLPDGGPTGRF 266
             +   E   +        P  R 
Sbjct: 210 WGQSFFEGSFQKI------PAKRI 227

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 95.5 bits (237), Expect = 6e-24
 Identities = 42/233 (18%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T +     G  VV+    +  G +    + +  V    + F   D
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----ISFVHCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTK--GDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           ++    V +L D    + GKLDI+    G        +     E     +  N YG    
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
            +    ++  +    +V  +S  S                                    
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSF----------------------------------- 147

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI 235
                       S  Y  +K  +   T  L     ++   VNCV P  V + +
Sbjct: 148 ------TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 95.2 bits (236), Expect = 6e-24
 Identities = 55/266 (20%), Positives = 81/266 (30%), Gaps = 52/266 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+ TG+ +GIG     +L  +G +VV+      +  E V  +LK  G      +  Q 
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQA 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           DIS  + V +L D   + FG LD +        W      T EL  +    N  G     
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +  +                                               +        
Sbjct: 124 QQGLKHCR-------------------------------------------RGGRIILTS 140

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI---NFHAG 240
              A     P+ + Y  SKA +  + R  A         VNC+ PG VKTD+   N    
Sbjct: 141 SIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHY 200

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRF 266
                +G         L +  P  R 
Sbjct: 201 APGGYKGMPQEKIDEGLANMNPLKRI 226

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 95.1 bits (236), Expect = 8e-24
 Identities = 55/263 (20%), Positives = 94/263 (35%), Gaps = 53/263 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E       D
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE---ASVCD 65

Query: 67  ISDLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           +S  +    L + +   F GKL+IL      V + +    T E     +  N+       
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
               P L+ S+   +V +SS                                        
Sbjct: 126 VLAHPFLKASERGNVVFISS---------------------------------------- 145

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGILS 243
             ++     P+ + Y  +K  ++  TR LA  + K    VN V PG + T +     +  
Sbjct: 146 --VSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL-----VEM 198

Query: 244 VEEGAESPVKLALLPDGGPTGRF 266
             +  E    L  L D     R 
Sbjct: 199 TIQDPEQKENLNKLIDRCALRRM 221

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 94.9 bits (235), Expect = 8e-24
 Identities = 49/269 (18%), Positives = 85/269 (31%), Gaps = 54/269 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+   IG  T  +LA +G  + L   + +   +A   ++  GV+      +  D
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---ARSYVCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQT-YELAVECLKTNYYGTKQTC 125
           ++   +V    D +   FGK+D L                  +     L  N  G     
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +A+   +   +  R+VN +S                                        
Sbjct: 123 KAVSRQMITQNYGRIVNTAS---------------------------------------- 142

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD------INF 237
             +A     P+ +AY  SK  I A T   A     +   VN + PG++         +  
Sbjct: 143 --MAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVEL 200

Query: 238 HAGILSVEEGAESPVKLALLPDGGPTGRF 266
            A + S     +  V    +    P  R+
Sbjct: 201 QAKVGSQYFSTDPKVVAQQMIGSVPMRRY 229

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 1e-23
 Identities = 48/265 (18%), Positives = 83/265 (31%), Gaps = 50/265 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG++KGIG E    LA  G  VV+TAR ++   + V      G       +    
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS--AHYIAGT 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D+              G LD+L           + +       + ++ N+        
Sbjct: 73  MEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV 132

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A +P+L+ S+                                   I +V           
Sbjct: 133 AALPMLKQSNG---------------------------------SIVVV----------S 149

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF----CVNCVCPGFVKTDINFHAGIL 242
            +A +   P  +AY  SK  ++ +   + K Y        +     G + T+    A   
Sbjct: 150 SLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG 209

Query: 243 SVEEGAESPVKLAL-LPDGGPTGRF 266
            V   A    + AL +  GG   + 
Sbjct: 210 IVHMQAAPKEECALEIIKGGALRQE 234

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.1 bits (231), Expect = 3e-23
 Identities = 45/262 (17%), Positives = 75/262 (28%), Gaps = 62/262 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+ KGIG +TV+ L + G  VV   R     +   ++          +    +D
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D  +            G +D+L    A V        T E        N     Q  +
Sbjct: 59  LGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            +                             R V G + N                    
Sbjct: 115 MVAR-----------------------DMINRGVPGSIVN------------------VS 133

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDINFHAGILSV 244
            +      P+   Y  +K  +   T+ +A       +  N V P  V TD+         
Sbjct: 134 SMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMG-------- 185

Query: 245 EEGAESPVKLALLPDGGPTGRF 266
           ++ +  P     L +  P  +F
Sbjct: 186 KKVSADPEFARKLKERHPLRKF 207

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 93.3 bits (231), Expect = 3e-23
 Identities = 48/232 (20%), Positives = 91/232 (39%), Gaps = 50/232 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E       + L A+G          L+
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------GLMLN 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D AS+ S+ + I+ +FG++DIL         + +     E   + ++TN     +  +
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A++  +      R++ + S                                         
Sbjct: 119 AVMRAMMKKRHGRIITIGS----------------------------------------- 137

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
            +         + Y  +KA +  +++ LA+        VN V PGF++TD+ 
Sbjct: 138 -VVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT 188

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.8 bits (230), Expect = 4e-23
 Identities = 44/262 (16%), Positives = 76/262 (29%), Gaps = 62/262 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ KGIG  TV+ L + G  VV  +R +      V +          +    +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D  +            G +D+L    A          T E      + N     Q  +
Sbjct: 61  LGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            +   L     P  +   S   + +                                   
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQR----------------------------------- 141

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGILSV 244
                    + S Y  +K  ++  T+++A         VN V P  V T +         
Sbjct: 142 ------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG-------- 187

Query: 245 EEGAESPVKLALLPDGGPTGRF 266
           +     P K   + +  P G+F
Sbjct: 188 QATWSDPHKAKTMLNRIPLGKF 209

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 1e-22
 Identities = 50/273 (18%), Positives = 83/273 (30%), Gaps = 57/273 (20%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +   ++TG + GIG     +LAS       V  T RD K      E  +A    P  L  
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTK 122
            QLD+ D  SV++  + +       D+L           +     +     L  N  GT 
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 123 QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
           +  +A +P ++   S R++   S                                     
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGS------------------------------------- 142

Query: 183 YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAG 240
                +      P +  Y  SK  +      LA     F   ++ +  G V T       
Sbjct: 143 -----VGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF----- 192

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 273
              +E+   SP ++    D     RF+     +
Sbjct: 193 ---MEKVLGSPEEVLDRTDIHTFHRFYQYLAHS 222

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.8 bits (227), Expect = 1e-22
 Identities = 38/272 (13%), Positives = 71/272 (26%), Gaps = 56/272 (20%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
                V+TG+++G G     QLA   S G  ++++AR E    +  E+L A   D + ++
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VV 63

Query: 62  FHQLDISDLASVSS----LADFIKTQFGKLDIL---TKGDAEVDWSKVCYQTYELAVECL 114
               D+   A V      + +  + +  +  +L        +V    +            
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 115 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEM 174
             N           +                                           + 
Sbjct: 124 ALNLTSMLCLTSGTLNAF----------------------------------------QD 143

Query: 175 VVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD 234
                        +           Y   KA  +   ++LA   P   V    PG +  D
Sbjct: 144 SPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203

Query: 235 INFHAGILSVEEGAESPVKLALLPDGGPTGRF 266
           +   A      E ++ P   + L      G  
Sbjct: 204 MQQLAR-----ETSKDPELRSKLQKLKSDGAL 230

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 91.0 bits (225), Expect = 2e-22
 Identities = 43/263 (16%), Positives = 77/263 (29%), Gaps = 50/263 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TGS +GIG         +G  V +   + +       ++  +           LD
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAAC------AIALD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D AS+      +  ++G +DIL    A  D + +   T E        N  GT    +
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
           A+   +        +   +  +                                      
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGR------------------------------------ 143

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHA-GILS 243
               RG       Y  +KA + + T+       +    VN + PG V  +         +
Sbjct: 144 ----RGEALVGV-YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFA 198

Query: 244 VEEGAESPVKLALLPDGGPTGRF 266
             E      K   +    P GR 
Sbjct: 199 DYENLPRGEKKRQVGAAVPFGRM 221

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 90.5 bits (224), Expect = 3e-22
 Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 48/231 (20%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
            VVTG+++GIG      L   G  V++  AR  K   E  ++++A G      +    D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA---ITFGGDV 60

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
           S  A V ++       +G +D++         + +         E +  N  G     +A
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE 187
              ++      R++N++S                                          
Sbjct: 121 ATKIMMKKRKGRIINIAS------------------------------------------ 138

Query: 188 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
           +         + Y  +KA +  +++  A+        VN VCPGF+ +D+ 
Sbjct: 139 VVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT 189

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 89.4 bits (221), Expect = 6e-22
 Identities = 40/232 (17%), Positives = 69/232 (29%), Gaps = 53/232 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+  GIG   +   A +G ++V   R+E+   EAV  L+A  +          D
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAI------AVVAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +SD  +V ++      +FG+L  +         +       E   + L+ N  G+     
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA- 118

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                                                       R    V +        
Sbjct: 119 --------------------------------------------RKAGEVLEEGGSLVLT 134

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
                      + Y   K  +    R LA    +    VN + PG ++T + 
Sbjct: 135 GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT 186

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 89.8 bits (222), Expect = 7e-22
 Identities = 39/263 (14%), Positives = 79/263 (30%), Gaps = 48/263 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G  T  +LA++G  + L     +    +   +  +  D E +L    D
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYY-GTKQTC 125
           +SD A V +       +FG++D                       + + +    G     
Sbjct: 64  VSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGL 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           E ++ ++    S  +VN +S                                        
Sbjct: 124 EKVLKIMREQGSGMVVNTAS---------------------------------------- 143

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILS 243
             +       + S Y  +K  +   TR  A  Y ++   +N + PG + T        + 
Sbjct: 144 --VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP--MVENSMK 199

Query: 244 VEEGAESPVKLALLPDGGPTGRF 266
             +               P+ R+
Sbjct: 200 QLDPENPRKAAEEFIQVNPSKRY 222

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.9 bits (220), Expect = 2e-21
 Identities = 34/279 (12%), Positives = 66/279 (23%), Gaps = 62/279 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL---LLFH 63
           +  +VTG+  G+G       A +G  VV+                A  V  E+       
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 67

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
             +   + +   L       FG++D++      +        + E      + +  G+ Q
Sbjct: 68  VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQ 127

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
              A    ++  +  R++  +S                                      
Sbjct: 128 VTRAAWDHMKKQNYGRIIMTAS-------------------------------------- 149

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAG- 240
                +        + Y  +K  +      L     K     N + P             
Sbjct: 150 ----ASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE 205

Query: 241 ----ILSVEEGAESPVKLA----------LLPDGGPTGR 265
                L  E  A   + L                G  G+
Sbjct: 206 DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGK 244

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 87.9 bits (217), Expect = 3e-21
 Identities = 55/232 (23%), Positives = 81/232 (34%), Gaps = 48/232 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++ E       D
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE---GSVCD 63

Query: 67  ISDLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           +        L   +   F GKL+IL      V   +    T +     + TN+       
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +   PLL+ S +  ++ LSS                                        
Sbjct: 124 QIAYPLLKASQNGNVIFLSSIA-------------------------------------- 145

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI 235
                       S Y  SK  IN  T+ LA  + K    VN V PG + T +
Sbjct: 146 ---GFSALPSV-SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.4 bits (216), Expect = 5e-21
 Identities = 45/233 (19%), Positives = 63/233 (27%), Gaps = 48/233 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  KGIG   V + A  G  +   AR+E    E + K +  G     +     D
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCD 65

Query: 67  ISDLASVSSLADFIKTQF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
            S       L   + + F GKLDIL      +        T E     + TN        
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +   P                                           +           
Sbjct: 126 QLAHP------------------------------------------LLKASGCGNIIFM 143

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 236
             IA        S Y  +K  +N   R LA  +       N V P  + T + 
Sbjct: 144 SSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 196

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 6e-21
 Identities = 35/234 (14%), Positives = 62/234 (26%), Gaps = 45/234 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A +TG   G+G      L+S G   V+ +R         E++ +   +   +   Q D
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK--VHAIQCD 83

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D   V +    +    G  +I+    A    S     +             GT     
Sbjct: 84  VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 143

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                                                       +  +  +         
Sbjct: 144 E-----------------------------------------IGKQLIKAQKGAAFLSIT 162

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFH 238
            I              +KA + A ++ LA  + K+    N + PG +KT   F 
Sbjct: 163 TIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 216

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 81.2 bits (200), Expect = 7e-19
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA---FACRCD 68

Query: 67 ISDLASVSSLADFIKTQFGKLDIL 90
          I+    +S+LADF  ++ GK+DIL
Sbjct: 69 ITSEQELSALADFAISKLGKVDIL 92

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 80.9 bits (199), Expect = 9e-19
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
          + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL +  GV+    +  + 
Sbjct: 6  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---TMAFRC 62

Query: 66 DISDLASVSSLADFIKTQFGKLDIL 90
          D+S+   V  L + +K +FGKLD +
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTV 87

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.4 bits (94), Expect = 9e-05
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 190 NRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEEG 247
                P+ SAY  SK  + + T+ LAK + ++   VN + PG+ +T +         E  
Sbjct: 146 EEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM--------TEAV 197

Query: 248 AESPVKLALLPDGGPTGRF 266
              P KL  +    P GR 
Sbjct: 198 FSDPEKLDYMLKRIPLGRT 216

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 79.5 bits (195), Expect = 4e-18
 Identities = 36/231 (15%), Positives = 62/231 (26%), Gaps = 31/231 (13%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQL-- 65
           AV+TG  + IG     +L  +G  VV+  R  +   +  V +L A+     +L    L  
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
             S L     + D     FG+ D+L    +    + +            K       +  
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 123

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
                           N  + +  ++    +                             
Sbjct: 124 G--------------SNAVAPLFLIRAFARRQGE------------GGAWRSRNLSVVNL 157

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD 234
            +       P    Y ++K  +   TR  A         VN V PG     
Sbjct: 158 CDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 208

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+VT      G  +  +L+  G TV       K+  + +E    +        + QL   
Sbjct: 3  AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ-KDELEAFAET--------YPQLKPM 53

Query: 69 DLASVSSLADFIKTQFGKLDIL 90
               + L + + + +G++D+L
Sbjct: 54 SEQEPAELIEAVTSAYGQVDVL 75

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 43.9 bits (103), Expect = 7e-06
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 189 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEE 246
              G     S Y  ++A        L+K   ++   V  + P ++ ++ +        E 
Sbjct: 133 TPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS--PYFYPTEP 190

Query: 247 GAESPVKLALLPDGGPTGRF 266
              +P  +A +       R 
Sbjct: 191 WKTNPEHVAHVKKVTALQRL 210

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 6e-16
 Identities = 44/268 (16%), Positives = 77/268 (28%), Gaps = 59/268 (22%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K  ++T + +GIG       A +G  V+ T  +E +  E  +         +  
Sbjct: 1   MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLD-- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
                      +     D    +  +LD+L      V    V     +     +  N   
Sbjct: 59  ----------VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRS 108

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
                +A +P +    S  ++N+SS  S++K                             
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVK----------------------------- 139

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFH 238
                          +   Y  +KA +   T+ +A  + +     NCVCPG V T     
Sbjct: 140 ------------GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE 187

Query: 239 AGILSVEEGAESPVKLALLPDGGPTGRF 266
                ++                 TGRF
Sbjct: 188 R----IQARGNPEEARNDFLKRQKTGRF 211

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 71.7 bits (175), Expect = 2e-15
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 58/232 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG N+GIG    ++LA+ G  V +T R            K        L   ++D
Sbjct: 8   RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------GAPKG-------LFGVEVD 53

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D  +V      ++   G +++L         + +   T E   + +  N  G  +  +
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ 113

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                ++ +   R++ + S                                         
Sbjct: 114 RASRSMQRNKFGRMIFIGS----------------------------------------- 132

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDIN 236
            ++      + + Y  SKA +    R +A+   K  V  N V PG++ TD+ 
Sbjct: 133 -VSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT 183

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.1 bits (173), Expect = 3e-15
 Identities = 30/271 (11%), Positives = 64/271 (23%), Gaps = 72/271 (26%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            +V G    +G   +      G TV+          ++   +               + +
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG-------------NKN 51

Query: 69  DLASVSSLADFIKT--QFGKLDILTKGDAEVDWSK-VCYQTYELAVECLKTNYYGTKQTC 125
                 S+ +   +  Q  ++D +                  + A   +K + + +    
Sbjct: 52  WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +       L     L    +                                        
Sbjct: 112 KLATT--HLKPGGLLQLTGA---------------------------------------- 129

Query: 186 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFHA-- 239
              A  G  P    Y ++KA ++  T  LA +         V  + P  + T +N     
Sbjct: 130 --AAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP 187

Query: 240 -----GILSVEEGAESPVKLALLPDGGP-TG 264
                    +   +E  +K        P +G
Sbjct: 188 NADHSSWTPLSFISEHLLKWTTETSSRPSSG 218

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 44/240 (18%), Positives = 75/240 (31%), Gaps = 56/240 (23%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+V G  + + +GF    +L   G  V L+ + E+   EA +  +A G         +
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL----LFR 64

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL----TKGDAEVDWSKVCYQTYELAVECLKTNYYG 120
            D++    + +L   +K  FG LD L         E    +      +  +  L+ + Y 
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 121 TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYF 180
                    PLL   +   +V L+                                    
Sbjct: 125 LVAVARRAEPLLR--EGGGIVTLTY----------------------------------- 147

Query: 181 KDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFH 238
                   A+    P  +   ++KA + A  R LA         VN +  G V+T     
Sbjct: 148 -------YASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS 200

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 70.9 bits (173), Expect = 3e-15
 Identities = 39/262 (14%), Positives = 74/262 (28%), Gaps = 71/262 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +V  +++GIG      L+ +G  V + AR+E       E LK SG        H+  
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG--------HRYV 49

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           + D   +    D +  +  ++DIL               T E   E + + +    +   
Sbjct: 50  VCD---LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
                                                          M  K + +     
Sbjct: 107 ------------------------------------------NYLPAMKEKGWGRIVAIT 124

Query: 187 EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSV 244
             +      +      ++  +  + + L+     +   VNCV PG+ +T+          
Sbjct: 125 SFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV-------- 176

Query: 245 EEGAESPVKLALLPDGGPTGRF 266
            +   S  K   +    P  R 
Sbjct: 177 -KELLSEEKKKQVESQIPMRRM 197

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 69.5 bits (169), Expect = 2e-14
 Identities = 40/241 (16%), Positives = 72/241 (29%), Gaps = 57/241 (23%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  +VTG  S   I +   + +  +G  +  T +++K      E     G D       Q
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI----VLQ 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL-----TKGDAEVDWSKVCYQTYELAVECLKTNYY 119
            D+++ AS+ ++   +   + K D            ++D   V   T E        + Y
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 120 GTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDY 179
                 +A      L+    L+ LS                                   
Sbjct: 122 SFVAMAKACRS--MLNPGSALLTLSYLG-------------------------------- 147

Query: 180 FKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDINF 237
                    A R   P+ +   ++KA + A  R +A       V  N +  G ++T    
Sbjct: 148 ---------AERAI-PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 197

Query: 238 H 238
            
Sbjct: 198 G 198

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 1e-13
 Identities = 37/238 (15%), Positives = 62/238 (26%), Gaps = 50/238 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             AV+TG   G+G  T  +L  +G + VL       G    +KL  + V     +  + D
Sbjct: 6   LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           +    +++               +       +  K    T E     L  N  GT     
Sbjct: 66  VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR 125

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG 186
            +                                             M   +  +  + G
Sbjct: 126 LVAGE------------------------------------------MGQNEPDQGGQRG 143

Query: 187 EIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNC--VCPGFVKTDIN 236
            I N             +AY  SK  I   T  +A+      +    + PG   T + 
Sbjct: 144 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.8 bits (157), Expect = 4e-13
 Identities = 24/240 (10%), Positives = 56/240 (23%), Gaps = 64/240 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +V G    +G   V+   ++   V      E     A              +  ++ 
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS-------------VIVKMT 49

Query: 67  ISDLASVSSLADFIKTQFG--KLDIL-TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
            S       +   +    G  K+D +          +      ++      K + + +  
Sbjct: 50  DSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 109

Query: 124 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
           +       L+  +   L    +                                      
Sbjct: 110 SSHLATKHLK--EGGLLTLAGA-------------------------------------- 129

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFHA 239
                A     P    Y ++K  ++   + LA +            V P  + T +N  +
Sbjct: 130 ----KAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS 185

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 65.1 bits (157), Expect = 6e-13
 Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 16/98 (16%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLL------ 61
           A+VTG+ K +G      L ++G  V L          A+   L A   +  + +      
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 62  ---------FHQLDISDLASVSSLADFIKTQFGKLDIL 90
                         ++     + L     T +G+ D+L
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVL 102

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 60.6 bits (146), Expect = 1e-11
 Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 68/243 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG   G+G      L ++G  VV+     + G + +              + + D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 46

Query: 67  ISDLASVSSLADFIKTQ---FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ 123
           ++    V       + +   F  +     G AE    K      E     L+ N  GT  
Sbjct: 47  VTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 106

Query: 124 TCEALIPLLELSDSP------RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVK 177
                   +  +          +VN +S                                
Sbjct: 107 VLRLAAWAMRENPPDAEGQRGVIVNTAS-------------------------------- 134

Query: 178 DYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV--NCVCPGFVKTDI 235
                     +A        +AY  SK  + A T   A+    + +    V PG   T +
Sbjct: 135 ----------VAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 184

Query: 236 NFH 238
              
Sbjct: 185 LQG 187

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 47/268 (17%), Positives = 77/268 (28%), Gaps = 61/268 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              V++G   GIG  T + L + G  +V     +        ++ A             D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD-------AEVIA-------------D 41

Query: 67  ISDLASVSSL-ADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC 125
           +S         AD +      +D L      V  + +  QT ++    +  NY+G  +  
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGL------VLCAGLGPQT-KVLGNVVSVNYFGATELM 94

Query: 126 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEE 185
           +A +P L+    P  V +SS                          +           E 
Sbjct: 95  DAFLPALKKGHQPAAVVISSV---------------------ASAHLAFDKNPLALALEA 133

Query: 186 GEIAN-------RGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFH 238
           GE A         G    + AY  SK  +    R  A  + +  V         T+    
Sbjct: 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193

Query: 239 AGILSVEEGAESPVKLALLPDGGPTGRF 266
              L      E     ++     P GR 
Sbjct: 194 QAGLQDPRYGE-----SIAKFVPPMGRR 216

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 57.4 bits (137), Expect = 2e-10
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 6/121 (4%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++ G  +NK I +   +   ++G T+  T  +E    + V  +      P     ++
Sbjct: 6   KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSP---YVYE 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
           LD+S      SL + +K   G LD +    A      +     E +     T    +  +
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 125 C 125
            
Sbjct: 122 L 122

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 25/188 (13%), Positives = 68/188 (36%), Gaps = 9/188 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A++ G+   +G     +LA+ G  +V+ +R E++      + +    D  +      D
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
            ++   ++ L    +        L      +   K+            K   Y ++++  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKN----ILREKIVVSPLVPVSRGAKGFTYSSERSAA 116

Query: 127 ALIPLLELSDSPRLVNLSSYVSALKDLPEK---ARAVLGDVENLTEERIEMVVKD-YFKD 182
            ++  +  S+       +   +   +L EK      V GD +   +  + ++ +    + 
Sbjct: 117 EIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176

Query: 183 YEEGEIAN 190
            + G ++N
Sbjct: 177 LDAGPLSN 184

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.8 bits (125), Expect = 8e-09
 Identities = 37/272 (13%), Positives = 71/272 (26%), Gaps = 48/272 (17%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  +V+G  ++  I F   R    +G  +VLT  D  R ++ +           LL    
Sbjct: 7   KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL--PAKAPLLELDV 64

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            +   LAS++           KLD +      +  + +    +  A     +        
Sbjct: 65  QNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAY 124

Query: 125 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYE 184
                                                      +  +  + + +      
Sbjct: 125 S----------------------------------------YASMAKALLPIMNPGGSIV 144

Query: 185 EGEIANRGWCPHSSAYKVSKAVINAYTRILA--KRYPKFCVNCVCPGFVKTDIN--FHAG 240
             +       P  +   V+K+ + +  R +A          N V  G ++T        G
Sbjct: 145 GMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGG 204

Query: 241 ILSVEEGAESPVKLALLPDGGPTGRFFLRKEE 272
            L  E GA+  +         P G        
Sbjct: 205 ALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP 236

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.8 bits (122), Expect = 2e-08
 Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 31/125 (24%)

Query: 6   KKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLE------------------ 45
           +    + G     G G+   ++L+ + + ++         +                   
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 46  -----------AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILTKGD 94
                            A+ +D E     + ++    ++  +A+ I  ++GK+++L    
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 95  AEVDW 99
           A    
Sbjct: 122 ANAKE 126

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.4 bits (116), Expect = 1e-07
 Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 31/116 (26%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAV----EKLKASGVDPELL 60
           K A + G   + G G+   + LA+ G  +++        +        K   S V P+  
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 61  LFH-------------------------QLDISDLASVSSLADFIKTQFGKLDILT 91
           L                           +   S   +V   A+ ++  FG +DIL 
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 44.2 bits (103), Expect = 7e-06
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 9  AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA 52
           +VTG   G+G +  R LA +G   ++L +R       A E +  
Sbjct: 12 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE 56

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 9e-06
 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 15/144 (10%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG----LEAVEKLKASGVDPELLL 61
           +  A++TG     G      L  KG  V    R         +E + K   + ++   + 
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MK 59

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGT 121
            H  D++D   +  + + +K             + V  S    +           +  GT
Sbjct: 60  LHYGDLTDSTCLVKIINEVKPTEIYNLG---AQSHVKISFDLAEYT------ADVDGVGT 110

Query: 122 KQTCEALIPLLELSDSPRLVNLSS 145
            +  +A+     L +S +    S+
Sbjct: 111 LRLLDAVK-TCGLINSVKFYQAST 133

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             +VTG+N  +    V QL   G  V  TAR   + L  ++K   +            D
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK-LANLQKRWDAKYPGRFETAVVED 70

Query: 67 ISD 69
          +  
Sbjct: 71 MLK 73

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 29/141 (20%), Positives = 44/141 (31%), Gaps = 12/141 (8%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKL-KASGVDPELLLFHQ 64
           K A++TG     G      L  KG  V    R       E V+ + +           H 
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT 124
            D+SD    S+L   ++             + V  S      +E        +  GT + 
Sbjct: 62  GDLSDT---SNLTRILREVQPDEVYNLGAMSHVAVS------FESPEYTADVDAMGTLRL 112

Query: 125 CEALIPLLELSDSPRLVNLSS 145
            EA+   L L    R    S+
Sbjct: 113 LEAIR-FLGLEKKTRFYQAST 132

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K   VTG     G      L + G TV   +          E  +      + +     
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIG 63

Query: 66 DISDLASV 73
          DI D   +
Sbjct: 64 DIRDQNKL 71

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 39.2 bits (90), Expect = 4e-04
 Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 6/68 (8%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          KK   V G+    G   +R  A+ G  V       K  L A E      V        Q 
Sbjct: 3  KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-LIAEELQAIPNVT-----LFQG 56

Query: 66 DISDLASV 73
           + +   +
Sbjct: 57 PLLNNVPL 64

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 5e-04
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 4  ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR 42
          A KK   + G+    G  T+ Q    G  V +  RD  R
Sbjct: 2  AVKKI-AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.4 bits (88), Expect = 5e-04
 Identities = 40/274 (14%), Positives = 70/274 (25%), Gaps = 30/274 (10%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDI 67
           VTG    IG   V  + +    V +T  D+         +E +    V+         DI
Sbjct: 7   VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVE-----LVVGDI 61

Query: 68  SDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA 127
           +D   V  LA                            +       + TN+ GT    EA
Sbjct: 62  ADAELVDKLAAKADAIV-----------HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEA 110

Query: 128 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEER-----------IEMVV 176
                          +   +   +DLP             T               +++V
Sbjct: 111 ARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV 170

Query: 177 KDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN 236
           K + + +      +     +     + K +    T ILA   PK               +
Sbjct: 171 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTND 230

Query: 237 FHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK 270
              G+ ++           +  DG    +  L  
Sbjct: 231 HSTGVWAILTKGRMGETYLIGADGEKNNKEVLEL 264

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 6e-04
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  +VTG    IG  TV +L   G   V+         ++V +L+   +    + F+++D
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV--LTKHHIPFYEVD 59

Query: 67 ISDLASVSSLADFIK 81
          + D   +  +    K
Sbjct: 60 LCDRKGLEKVFKEYK 74

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 30/224 (13%), Positives = 63/224 (28%), Gaps = 22/224 (9%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG     G    + L  KG  V               +L+  G++ + + +   D
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGD-IQYEDGD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           ++D  SV       + Q             V              + + T          
Sbjct: 58  MADACSVQRAVIKAQPQE------------VYNLAAQSFVGASWNQPVTTGVVDGLGVTH 105

Query: 127 ALIPLLELSDSPRLVNLSSYV----SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD 182
            L  + + S   R    S+         +   E           + +     +  +Y + 
Sbjct: 106 LLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES 165

Query: 183 YEEGEIANRGWC---PHSSAYKVSKAVINAYTRILAKRYPKFCV 223
           +     +   +    P      V++ V +A  RI   +  +  +
Sbjct: 166 FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRL 209

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.5 bits (85), Expect = 0.001
 Identities = 7/63 (11%), Positives = 16/63 (25%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          ++   ++ G+   IG    +     G    L  R+      + +                
Sbjct: 2  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 65 LDI 67
            I
Sbjct: 62 GSI 64

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 41/215 (19%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRG--LEAVEKLKASGVDPELLLFHQLDIS 68
           +TG    IG   VR +       V+          LE++  +     +     F   DI 
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS----ESNRYNFEHADIC 60

Query: 69  DLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL 128
           D A ++ + +  +       +    ++ VD S             ++TN  GT    E  
Sbjct: 61  DSAEITRIFEQYQPDA---VMHLAAESHVDRS------ITGPAAFIETNIVGTYALLEVA 111

Query: 129 I-----PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDY 183
                    +  ++ R  ++S+              V GD+ +  E    + +  + +  
Sbjct: 112 RKYWSALGEDKKNNFRFHHISTD------------EVYGDLPHPDEVENSVTLPLFTETT 159

Query: 184 EEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 218
                         S Y  SKA  +   R   + Y
Sbjct: 160 AYAPS---------SPYSASKASSDHLVRAWRRTY 185

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLF 62
          +K A++TG     G      L  KG  V    R              +    V+  L+  
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 63 HQLDISDLASVSSL 76
          H  D++D +S+   
Sbjct: 61 HYADLTDASSLRRW 74

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 21/121 (17%), Positives = 34/121 (28%), Gaps = 20/121 (16%)

Query: 11  VTGSNKGIGFETVRQLASKGITVV----LTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +TG    +G        S+GI ++    L+ +     L  +  L           F   D
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN-------FEFVHGD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE 126
           I +   V+ L    K        L               + +      + N  GT    E
Sbjct: 58  IRNKNDVTRL--ITKYMPDSCFHLA-------GQVAMTTSIDNPCMDFEINVGGTLNLLE 108

Query: 127 A 127
           A
Sbjct: 109 A 109

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 4/55 (7%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG----LEAVEKLKASGVD 56
          K   ++ G    IG   V    S G    +  R E       ++ +   K  G  
Sbjct: 3  KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	275
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.98
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.72
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.65
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.64
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.63
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.62
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.62
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.62
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.57
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.54
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.47
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.45
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.36
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.32
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.17
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.16
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.09
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.06
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.04
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.93
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.93
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.91
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.85
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.77
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.76
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.75
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.74
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.71
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.65
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.64
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.53
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.5
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.5
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.5
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.38
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.35
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.32
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.26
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.26
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.24
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.17
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.11
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.11
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.05
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.02
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.02
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.02
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.01
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.98
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.96
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.95
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.86
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.84
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.83
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.8
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.76
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.71
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.7
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.63
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.59
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.56
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.51
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.5
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.48
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.47
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.45
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.41
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.41
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.4
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.38
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.38
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.31
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.3
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.29
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.18
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.15
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.05
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.99
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.97
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.95
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.86
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.69
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.53
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.41
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.3
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.14
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.1
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.94
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.86
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.83
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.77
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.73
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.83
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.8
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.73
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.6
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.57
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.53
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.51
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.49
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.39
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.36
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.35
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.29
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.24
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.13
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.13
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.06
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.91
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.84
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.71
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.58
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.54
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.52
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.46
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.46
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.43
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.42
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.42
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.37
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.37
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.32
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.29
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.26
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.22
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.0
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.95
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.91
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.9
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.53
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.52
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.3
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.22
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.13
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.03
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.01
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.99
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.85
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.74
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.56
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.41
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.35
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	90.27
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.22
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.08
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.03
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	89.97
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.85
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.55
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.4
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.39
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.38
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.31
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.92
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.46
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.39
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	88.33
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.33
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.32
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.27
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.11
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.11
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.97
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.64
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.6
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	87.54
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.53
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.46
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.18
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	86.83
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	86.72
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.39
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.25
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.22
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.72
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.63
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.5
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	84.2
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.07
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	83.95
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.77
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.74
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.63
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.53
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.42
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.15
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	83.09
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.01
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	82.39
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.27
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	82.19
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	81.54
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.27
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.64
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	80.47

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5e-48  Score=328.74  Aligned_cols=229  Identities=22%  Similarity=0.243  Sum_probs=199.3

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      -++++|++|||||++|||+++|++|+++|++|++++|+.++++++.++++..+.+   +..+++|++++++++++++++.
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---SSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999999999999999876544   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||.....++.+.+.++|++++++|+.++|+++|+++|.|.+++.|+|||+||+++..+.         
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~---------  153 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------  153 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC---------
Confidence            99999999999999988888888999999999999999999999999999999888999999999887664         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|....
T Consensus       154 ---------------------------------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~  200 (251)
T d2c07a1         154 ---------------------------------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI  200 (251)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred             ---------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc
Confidence                                             678899999999999999999998  589999999999999997543


Q ss_pred             CCCC-hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILS-VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..-. .......|++++.+|++.+....||+++.++|
T Consensus       201 ~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         201 SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            2111 11112457778888888888888888888765

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-47  Score=324.63  Aligned_cols=221  Identities=21%  Similarity=0.267  Sum_probs=200.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      +..++++|++++++++++++++.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC------cceEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999998888777643      278899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||++|+||||||.....++.+.+.++|++.|++|+.++|+++|++.|.|.++++|+||++||+.+..+.          
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------  146 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT----------  146 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc----------
Confidence            9999999999999988888889999999999999999999999999999999888999999999887665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|+++|+++++|+|+++.|+  .|||||+|+||+|+|+|.... 
T Consensus       147 --------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-  193 (244)
T d1nffa_         147 --------------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-  193 (244)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-
T ss_pred             --------------------------------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-
Confidence                                            778899999999999999999999  589999999999999997543 


Q ss_pred             CCChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                         +++..+.+++++.+|++.+....||.++.++|
T Consensus       194 ---~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~  225 (244)
T d1nffa_         194 ---PEDIFQTALGRAAEPVEVSNLVVYLASDESSY  225 (244)
T ss_dssp             ---CTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ---hHHHHhccccCCCCHHHHHHHHHHHhChhhCC
Confidence               34455677788888888888888888877765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-48  Score=327.01  Aligned_cols=225  Identities=24%  Similarity=0.286  Sum_probs=198.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...      ...+++|++++++++++++++.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN------GKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------CcEEEEEecCHHHhhhhhhhhhc
Confidence            589999999999999999999999999999999999999999888877432      77899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||.....++.+.+.++|++.|++|+.++|+++|+++|+|+++++|+|||+||+++..+.          
T Consensus        75 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----------  144 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN----------  144 (243)
T ss_dssp             HTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             ccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC----------
Confidence            9999999999999988888889999999999999999999999999999998888999999998887654          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++..+|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|.....
T Consensus       145 --------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  192 (243)
T d1q7ba_         145 --------------------------------GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS  192 (243)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             --------------------------------CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh
Confidence                                            678899999999999999999999  5899999999999999875432


Q ss_pred             CCCh-hhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSV-EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .-.. ....+.|++++.+|++.++...||.++.++|
T Consensus       193 ~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         193 DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAY  228 (243)
T ss_dssp             HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            1111 1112457777778888888888888877765

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.5e-47  Score=323.42  Aligned_cols=229  Identities=27%  Similarity=0.374  Sum_probs=201.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.  ++..+++|++++++++++++++.+
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999888887654332  288899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||.....++.+.+.++|++.|++|+.++|+++|+++|+|+++++|+||+++|+.+...           
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~-----------  148 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------  148 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-----------
Confidence            999999999999998888899999999999999999999999999999999999999999999765432           


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                    +.++...|+++|+|+++|+|+++.|+  .|||||+|+||+|+|+|.....
T Consensus       149 ------------------------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~  198 (251)
T d1vl8a_         149 ------------------------------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF  198 (251)
T ss_dssp             ------------------------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred             ------------------------------cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence                                          12567899999999999999999999  5899999999999999975321


Q ss_pred             CCChhh----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                       ..++.    ..+.|++++.+|++.+....||+++.++|
T Consensus       199 -~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~  236 (251)
T d1vl8a_         199 -SDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  236 (251)
T ss_dssp             -TCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             -CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence             11221    23468888999999999999999998876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.4e-47  Score=325.18  Aligned_cols=226  Identities=22%  Similarity=0.290  Sum_probs=202.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.++++++.++++..+.+   +.++++|++++++++++++++.
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~---~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999999876554   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||.....++ +.+.++|++++++|+.++|+++|+++|+|.++++|+||++||.++..+.         
T Consensus        84 ~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---------  153 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------  153 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------
T ss_pred             HHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc---------
Confidence            999999999999998766655 6899999999999999999999999999999888999999998887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|++||+|+.+|+|++|.|+  .|||||+|+||+|+|++....
T Consensus       154 ---------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  200 (255)
T d1fmca_         154 ---------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             ---------------------------------cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc
Confidence                                             778999999999999999999998  589999999999999987543


Q ss_pred             CCCChhhh----hccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILSVEEG----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~~~~~----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                        .+++..    ...|++++.+|++.+....||.++.++|
T Consensus       201 --~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  238 (255)
T d1fmca_         201 --ITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_dssp             --CCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             --CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              233322    3467888888888899999999888876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.6e-47  Score=323.57  Aligned_cols=228  Identities=23%  Similarity=0.226  Sum_probs=179.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++......   +..+.+|++++++++++++++.+
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---eEEEeccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999999998876544   89999999999999999999999


Q ss_pred             hc-CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +| |+||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+|||+||+.+..+.         
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------  152 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------  152 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc---------
Confidence            98 68999999999988888889999999999999999999999999999998888999999999887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|+|+.+|+|++|.|+  .|||||+|+||+|+|+|....
T Consensus       153 ---------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~  199 (259)
T d1xq1a_         153 ---------------------------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  199 (259)
T ss_dssp             -----------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             ---------------------------------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh
Confidence                                             667899999999999999999999  689999999999999997543


Q ss_pred             CC--CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GI--LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..  .........|++++.+|++++....||.++.++|
T Consensus       200 ~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (259)
T d1xq1a_         200 YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY  237 (259)
T ss_dssp             ------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred             chHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            21  1112223568888999999999999999998876

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.8e-47  Score=320.95  Aligned_cols=226  Identities=22%  Similarity=0.269  Sum_probs=187.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+..+.  ..+.++..+..   +..+++|++++++++++++++.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g~~---~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRR---VLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcCCc---EEEEEeeCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987532  22334444333   88999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||+....++.+.+.++|++.|++|+.++|+++|+++|.|+++++|+|||+||.++..+.          
T Consensus        77 ~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----------  146 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------  146 (247)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC----------
Confidence            9999999999999988888999999999999999999999999999999999888999999999887665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||+|+.+|+|+++.|+  .|||||+|+||+|+|++.....
T Consensus       147 --------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  194 (247)
T d2ew8a1         147 --------------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA  194 (247)
T ss_dssp             --------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------
T ss_pred             --------------------------------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc
Confidence                                            778899999999999999999998  5899999999999999875432


Q ss_pred             CCCh-hhh--hccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSV-EEG--AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~-~~~--a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .-.. +..  ...++.++.+|++.+....||+++.++|
T Consensus       195 ~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~  232 (247)
T d2ew8a1         195 LSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASF  232 (247)
T ss_dssp             ---------CTTSSSCSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             cchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcC
Confidence            1111 111  1236777888888888888888888776

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=6e-47  Score=323.44  Aligned_cols=229  Identities=24%  Similarity=0.259  Sum_probs=203.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|++++++++++++++.
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---VEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---ceEEEeeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998876543   8889999999999999999999


Q ss_pred             hhcC-CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFG-KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++|+ ++|++|||||.....++.+.+.++|++++++|+.++|+++|+++|.|+++++|+||++||..+..+.        
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~--------  152 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV--------  152 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC--------
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc--------
Confidence            9987 8999999999988888889999999999999999999999999999999989999999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+|+++|+|+++.|+  .+||||+|+||+|+|+|...
T Consensus       153 ----------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~  198 (259)
T d2ae2a_         153 ----------------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  198 (259)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             ----------------------------------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHh
Confidence                                              778999999999999999999999  58999999999999998643


Q ss_pred             CCCCC-hhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILS-VEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~-~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ...-. .++     ..+.|++++.+|++.++...||.++.++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         199 TIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             HTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            21110 111     13467888888888899999999888876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.9e-47  Score=324.34  Aligned_cols=228  Identities=24%  Similarity=0.279  Sum_probs=195.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++....+.  ++.++++|++++++++++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV--KVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS--CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999974 5677777777654332  288999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||.....++.+.+.++|++.|++|+.++++++|+++|+|++++.|+|||+||.++..+.          
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----------  149 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----------  149 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc----------
Confidence            9999999999999988888889999999999999999999999999999999888999999999888665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||+|+.+|+|+++.|+  .|||||+|+||+|+|+|.....
T Consensus       150 --------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (260)
T d1x1ta1         150 --------------------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI  197 (260)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             --------------------------------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence                                            778899999999999999999998  5899999999999999874321


Q ss_pred             C-------CChhh------hhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 I-------LSVEE------GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~-------~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .       ..+++      ....|++++.+|++.++...||.++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  245 (260)
T d1x1ta1         198 SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQ  245 (260)
T ss_dssp             -----------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            0       11111      23457888888999999999999988876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=8.5e-47  Score=322.26  Aligned_cols=230  Identities=19%  Similarity=0.171  Sum_probs=200.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...... .++..+++|++++++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEeccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888887765433 2388999999999999999999999


Q ss_pred             hcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +||+||+||||||+.. ..++.+.+.++|++.|++|+.++|+++|+++|.|+++++|+|||+||..+..+.         
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------  150 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------  150 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC---------
Confidence            9999999999999764 456778899999999999999999999999999998889999999999887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|+++|+|+.+|+|+++.|+  .|||||+|+||+|+|+|....
T Consensus       151 ---------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~  197 (258)
T d1iy8a_         151 ---------------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS  197 (258)
T ss_dssp             ---------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH
Confidence                                             778999999999999999999998  589999999999999986322


Q ss_pred             ----CCCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          240 ----GILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ----~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                          ....+++.     ...|++++.+|++.++...||+++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~  242 (258)
T d1iy8a_         198 MKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASY  242 (258)
T ss_dssp             HHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                11222222     2347788888888888888999888876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.7e-46  Score=319.66  Aligned_cols=228  Identities=22%  Similarity=0.241  Sum_probs=204.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++++.|+++|++|++++|+.++++++.++++..+.+   +..+++|++++++++++++++.+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---ARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999998876544   88999999999999999999999


Q ss_pred             hcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +||+||+||||||... ..++.+.+.++|++.+++|+.++|+++|+++|.|.++++|+||++||.++..+.         
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~---------  149 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---------  149 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC---------
Confidence            9999999999999764 467889999999999999999999999999999998888999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                       ++...|++||+|+++|+|+++.|+  .|||||+|+||+|+|++... 
T Consensus       150 ---------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  196 (260)
T d1zema1         150 ---------------------------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER  196 (260)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred             ---------------------------------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence                                             778899999999999999999998  58999999999999997421 


Q ss_pred             -----------CCCCChhhhh-----ccceeecccCCCCCcceEeccCcccCC
Q 023896          239 -----------AGILSVEEGA-----ESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 -----------~~~~~~~~~a-----~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                                 .....+++..     ..|++++.+|++.+....||+++.++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~  249 (260)
T d1zema1         197 QVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSF  249 (260)
T ss_dssp             HHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             chhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                       1223344433     467889999999999999999999876

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4.8e-47  Score=322.84  Aligned_cols=226  Identities=20%  Similarity=0.274  Sum_probs=195.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      ++.++++|++++++++++++++.
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   74 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD------AARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------ceEEEEcccCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999988877766532      28899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+||++||+++..+.         
T Consensus        75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~---------  145 (254)
T d1hdca_          75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------  145 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc---------
Confidence            99999999999999988888889999999999999999999999999999998888999999999887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|++||+|+.+|+|+++.|+  .+||||+|+||+|+|+|....
T Consensus       146 ---------------------------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~  192 (254)
T d1hdca_         146 ---------------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             ---------------------------------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhc
Confidence                                             778899999999999999999998  589999999999999986432


Q ss_pred             CC-CChhhhhccceeecc-cCCCCCcceEeccCcccCC
Q 023896          240 GI-LSVEEGAESPVKLAL-LPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~-~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~a~~  275 (275)
                      .. .......+.+++++. .|++.+....||+++.++|
T Consensus       193 ~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~  230 (254)
T d1hdca_         193 GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY  230 (254)
T ss_dssp             TCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTT
T ss_pred             CHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCC
Confidence            21 111222345666665 4667777777777777665

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.2e-46  Score=319.77  Aligned_cols=225  Identities=24%  Similarity=0.361  Sum_probs=200.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.+   +.++++|++++++++++++++.++||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~---~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999999999999999999999876544   88999999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhh--hhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL--LELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +||+||||||.....++.+.+.++|++.+++|+.++++++|+++|+  |.+++.|+||++||..+..+.           
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-----------  147 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----------  147 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-----------
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-----------
Confidence            9999999999988888889999999999999999999999999997  455667899999998887665           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC--
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                     ++...|++||+|+.+|+|++|.|+  .|||||+|+||+|+|+|....  
T Consensus       148 -------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  196 (257)
T d2rhca1         148 -------------------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE  196 (257)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHH
T ss_pred             -------------------------------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHh
Confidence                                           778999999999999999999999  579999999999999986321  


Q ss_pred             -----CCCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          240 -----GILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 -----~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                           ....+++.     ...|++++.+|++.+....||+++.++|
T Consensus       197 ~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~  242 (257)
T d2rhca1         197 HYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAA  242 (257)
T ss_dssp             HHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                 12233332     3467888888899999999999988876

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-46  Score=317.37  Aligned_cols=223  Identities=23%  Similarity=0.192  Sum_probs=193.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.        ...+++|++++++++++++++.
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~   72 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------AHPVVMDVADPASVERGFAEAL   72 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------CeEEEEecCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999988777765432        6678999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||+....++.+.+.++|++.+++|+.++|+++|+++|.|.+++.++|+++||. +..+.         
T Consensus        73 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~---------  142 (242)
T d1ulsa_          73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGN---------  142 (242)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCC---------
T ss_pred             HhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCC---------
Confidence            99999999999999988888889999999999999999999999999999998887788887774 34333         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|+++|+|+++|+|+++.|+  .|||||+|+||+|+|++....
T Consensus       143 ---------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~  189 (242)
T d1ulsa_         143 ---------------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (242)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC
Confidence                                             678899999999999999999999  589999999999999997654


Q ss_pred             CCCChhh-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILSVEE-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .....++ ....|++++.+|++.+....||+++.++|
T Consensus       190 ~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~  226 (242)
T d1ulsa_         190 PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF  226 (242)
T ss_dssp             CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCC
Confidence            2211111 23467888888888888888888888776

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.6e-46  Score=317.18  Aligned_cols=225  Identities=24%  Similarity=0.277  Sum_probs=199.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...    .++.++++|++++++++++++++.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999988888877432    2388999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCC-eEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +||+||+||||||.....++.+.+.++|++.|++|+.++|+++|+++|.|++++.| +||++||+.+..+.         
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~---------  149 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------  149 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC---------
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC---------
Confidence            99999999999999888888899999999999999999999999999999988765 89999998887664         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|+++|+++.+|+|++|.|+    .|||||+|+||+|+|+|..
T Consensus       150 ---------------------------------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~  196 (251)
T d1zk4a1         150 ---------------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD  196 (251)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH
T ss_pred             ---------------------------------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHH
Confidence                                             778899999999999999999984    5899999999999999875


Q ss_pred             CCCCCChhhh----hccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILSVEEG----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~~~~----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..  ..+++.    .+.|++++.+|++.+....||+++.++|
T Consensus       197 ~~--~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  236 (251)
T d1zk4a1         197 DL--PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             TS--TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hc--CCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            43  222222    2457788888888888888888888776

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.3e-46  Score=319.97  Aligned_cols=227  Identities=22%  Similarity=0.253  Sum_probs=197.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+ .++...++++..+..   +..+++|++++++++++++++.
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---AIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            699999999999999999999999999999999999865 567777888776543   8889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCC-eEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|.|.+++.+ +||++||.++..+.        
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~--------  152 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW--------  152 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC--------
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC--------
Confidence            999999999999999888888899999999999999999999999999999877655 58999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        +...+|++||+|+.+|+|+++.|+  .|||||+|+||+|+|++...
T Consensus       153 ----------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~  198 (261)
T d1geea_         153 ----------------------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH
T ss_pred             ----------------------------------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhh
Confidence                                              778999999999999999999999  58999999999999998643


Q ss_pred             CCCCChhh----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .. ..++.    ....|++++.+|++++....||+++.++|
T Consensus       199 ~~-~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~  238 (261)
T d1geea_         199 KF-ADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY  238 (261)
T ss_dssp             HH-HSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hc-CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            21 11111    22457788888888888888888887765

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.5e-46  Score=317.56  Aligned_cols=226  Identities=21%  Similarity=0.230  Sum_probs=197.5

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++..      ++..+++|++++++++++++++.
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~------~~~~~~~Dvt~~~~v~~~~~~~~   74 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP------AACAIALDVTDQASIDRCVAELL   74 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCT------TEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------ceEEEEeeCCCHHHHHHHHHHHH
Confidence            569999999999999999999999999999999999999998888877632      28889999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||.....++.+.+.++|++.+++|+.++++++|++.|.|.+ .++|+||++||..+..+.        
T Consensus        75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------  146 (256)
T d1k2wa_          75 DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE--------  146 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred             HHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc--------
Confidence            99999999999999988888889999999999999999999999999997654 456899999998887665        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|++||+|+++|+|+++.|+  .|||||+|+||+|+|++...
T Consensus       147 ----------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~  192 (256)
T d1k2wa_         147 ----------------------------------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG  192 (256)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH
T ss_pred             ----------------------------------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh
Confidence                                              778999999999999999999999  58999999999999998532


Q ss_pred             CC-------CCChhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AG-------ILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~-------~~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..       ..+.++     ....|++++.+|++.++...||+++.++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~  241 (256)
T d1k2wa_         193 VDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY  241 (256)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTT
T ss_pred             hhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            10       111111     23457888888888899999999888876

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.3e-46  Score=316.49  Aligned_cols=225  Identities=19%  Similarity=0.272  Sum_probs=198.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|++|||||++|||+++|++|+++|++|++++|+.++++++.++++..+.+   +.++++|++++++++++++++.++||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999999999876654   88999999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-CCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                      +||+||||||+....++.+.+.++|++.+++|+.|+|+++|+++|.|.+++ .++||++||..+..+.            
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------  145 (255)
T d1gega_          78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------  145 (255)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------
T ss_pred             CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------------
Confidence            999999999998888899999999999999999999999999999876554 5789999998887665            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC--
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG--  240 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~--  240 (275)
                                                    ++...|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|.....  
T Consensus       146 ------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  195 (255)
T d1gega_         146 ------------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ  195 (255)
T ss_dssp             ------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHH
T ss_pred             ------------------------------cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhh
Confidence                                          788999999999999999999998  5899999999999999853210  


Q ss_pred             -------C---CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 -------I---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 -------~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                             .   ...+...+.|++++.+|++.++...||+++.++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         196 VSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence                   0   1111223567888888888888888998888876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.4e-46  Score=314.57  Aligned_cols=222  Identities=21%  Similarity=0.212  Sum_probs=192.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++||++|||||++|||++++++|+++|++|++++|+.+..+ ..+++.        ..++++|++++++++++++++.+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG--------GAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT--------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC--------CeEEEEeCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987543 333331        45689999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||+||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|+|+++++|+||++||..+..+.          
T Consensus        73 ~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----------  142 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------  142 (248)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------
T ss_pred             hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc----------
Confidence            9999999999999988888889999999999999999999999999999999888999999999888665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|+++|+|+++|+|+++.|+  .|||||+|+||+|+|++.....
T Consensus       143 --------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~  190 (248)
T d2d1ya1         143 --------------------------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAI  190 (248)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             --------------------------------cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHh
Confidence                                            778999999999999999999999  5899999999999999753210


Q ss_pred             -------CCChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 -------ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 -------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                             ..........+++++.+|++.+....||+++.++|
T Consensus       191 ~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~  232 (248)
T d2d1ya1         191 ALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASF  232 (248)
T ss_dssp             C--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                   11111223457788888888888888888888776

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.2e-46  Score=317.17  Aligned_cols=224  Identities=21%  Similarity=0.281  Sum_probs=194.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++|||||++|||++++++|+++|++|++++ |+.+.+++..++++..+.+   +.++++|++++++++++++++.++||
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---AITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE---EEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCc---EEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999875 5777788888888766543   88999999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      +||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|+|+++++|+|||+||+++..+.             
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~-------------  145 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-------------  145 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------------
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC-------------
Confidence            9999999999988888999999999999999999999999999999998888999999999887665             


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCCCC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILS  243 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~~~  243 (275)
                                                   ++...|++||+|+.+|+|+++.|+  .|||||+|+||+|+|+|......-.
T Consensus       146 -----------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~  196 (244)
T d1edoa_         146 -----------------------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDM  196 (244)
T ss_dssp             -----------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHH
T ss_pred             -----------------------------CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHH
Confidence                                         678999999999999999999999  5899999999999999875432111


Q ss_pred             hhh-hhccceeecccCCCCCcceEecc-CcccCC
Q 023896          244 VEE-GAESPVKLALLPDGGPTGRFFLR-KEEAPF  275 (275)
Q Consensus       244 ~~~-~a~~~~~~~~~~~~~~~~~~~~~-~~~a~~  275 (275)
                      .++ ..+.|++++.+|++.+....||+ ++.++|
T Consensus       197 ~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~  230 (244)
T d1edoa_         197 EKKILGTIPLGRTGQPENVAGLVEFLALSPAASY  230 (244)
T ss_dssp             HHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGG
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcC
Confidence            111 23457777777877777777774 666654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-46  Score=315.99  Aligned_cols=218  Identities=20%  Similarity=0.234  Sum_probs=184.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+..+              .+..+++|++++++++++++++.
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------------CceEEEEecCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999875321              26789999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++||+||+||||||.....++.+.+.++|++++++|+.++++++|+++|.|.+++.|+|||+||+.+..+.         
T Consensus        69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------  139 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------  139 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------
T ss_pred             HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC---------
Confidence            99999999999999988888889999999999999999999999999999999999999999999987654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|....
T Consensus       140 ---------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  186 (237)
T d1uzma1         140 ---------------------------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  186 (237)
T ss_dssp             ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             ---------------------------------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence                                             678899999999999999999998  689999999999999987543


Q ss_pred             CCCChhh-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILSVEE-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .....+. ....+++++.+|++.+....||.++.++|
T Consensus       187 ~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         187 DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY  223 (237)
T ss_dssp             CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            2111111 23457778888888888888888887765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.1e-44  Score=305.97  Aligned_cols=210  Identities=24%  Similarity=0.219  Sum_probs=190.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCE-------EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGIT-------VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~-------vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      ++||||||++|||++++++|+++|++       |++++|+.+++++..++++..+..   +.++++|+++++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL---TDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE---EEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999997       999999999999999998876543   88899999999999999999


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      +.++||+||+||||||.....++.+.+.++|++.|++|+.|+|+++|+++|+|+++++|+|||+||+++..+.       
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-------  151 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-------  151 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC-------
Confidence            9999999999999999998888999999999999999999999999999999998888999999999888765       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                         ++...|++||+|+.+|+|+++.|+  .|||||+|+||+|+|+|..
T Consensus       152 -----------------------------------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~  196 (240)
T d2bd0a1         152 -----------------------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  196 (240)
T ss_dssp             -----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             -----------------------------------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh
Confidence                                               778999999999999999999998  5899999999999999975


Q ss_pred             CCC------CCChhhhhccceeecccCCCC
Q 023896          238 HAG------ILSVEEGAESPVKLALLPDGG  261 (275)
Q Consensus       238 ~~~------~~~~~~~a~~~~~~~~~~~~~  261 (275)
                      ...      ..+|+|.++.+++++..+...
T Consensus       197 ~~~~~~~~~~~~PedvA~~v~~l~s~~~~~  226 (240)
T d2bd0a1         197 KVDDEMQALMMMPEDIAAPVVQAYLQPSRT  226 (240)
T ss_dssp             CCCSTTGGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             hcCHhhHhcCCCHHHHHHHHHHHHcCCccC
Confidence            432      357888888888777665543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.6e-45  Score=312.34  Aligned_cols=229  Identities=19%  Similarity=0.221  Sum_probs=195.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+    ++.++++|++++++++++++++.
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~~~~~v~~~~~~~~   77 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD----VISFVHCDVTKDEDVRNLVDTTI   77 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT----TEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC----ceEEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999888875432    27788999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccc--hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHh
Q 023896           82 TQFGKLDILTKGDAEVDWS--KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                      ++||+||+||||||.....  .+.+.+.++|++.+++|+.++|+++|+++|+|.+++.|+||++||+.+..+.       
T Consensus        78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~-------  150 (268)
T d2bgka1          78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------  150 (268)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------
T ss_pred             HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc-------
Confidence            9999999999999986544  3567889999999999999999999999999999888999999998877543       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                        ++....|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|..
T Consensus       151 ----------------------------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~  196 (268)
T d2bgka1         151 ----------------------------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT  196 (268)
T ss_dssp             ----------------------------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred             ----------------------------------cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHh
Confidence                                              1334589999999999999999999  5899999999999999976


Q ss_pred             CCCCCChhhh------hccceeecccCCCCCcceEeccCcccCC
Q 023896          238 HAGILSVEEG------AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~~~~------a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ......+++.      ...+++++.+|++++....||+++.++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         197 DVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             TSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            5433322221      1235667777888888888888888776

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-46  Score=315.14  Aligned_cols=223  Identities=26%  Similarity=0.328  Sum_probs=188.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++||++|||||++|||+++++.|+++|++|++++|+.+++++..+++.    .   ..++++|++++++++++++++.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~---~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----G---AVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----T---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----C---CeEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999988877766542    2   7789999999999999999999


Q ss_pred             hhcCCccEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||... ..++.+.+.++|++.+++|+.++|+++|+++|+|+++ +|+||++||+.+..+.        
T Consensus        75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~--------  145 (250)
T d1ydea1          75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ--------  145 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC--------
T ss_pred             HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccc--------
Confidence            99999999999999764 3456788999999999999999999999999999865 4899999998877554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++..+|+++|+|+.+|+|+++.|+  .+||||+|+||+|+|+|...
T Consensus       146 ----------------------------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         146 ----------------------------------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             ----------------------------------cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH
Confidence                                              778899999999999999999999  58999999999999998643


Q ss_pred             CCCC--Chhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGIL--SVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~--~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ....  .+++     ....|++++.+|++.+....||.++ ++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~  234 (250)
T d1ydea1         192 LAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANF  234 (250)
T ss_dssp             HHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTT
T ss_pred             HhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCC
Confidence            2111  1111     1234677777777777777777765 554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.1e-45  Score=311.91  Aligned_cols=230  Identities=26%  Similarity=0.295  Sum_probs=186.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+....++..+++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999988765555699999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccc----hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcc-ccCCCcHHH
Q 023896           83 QFGKLDILTKGDAEVDWS----KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDLPEKA  157 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~  157 (275)
                      +||+||+||||||.....    .+.+.+.|+|++.|++|+.++|+++|+++|+|++++ |++|+++|+.+ ..+.     
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~-----  155 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT-----  155 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC-----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccC-----
Confidence            999999999999975432    344568899999999999999999999999998765 67777777654 4443     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           +....|++||+|+++|+|+++.|+  .|||||+|+||+|+|+|
T Consensus       156 -------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~  198 (264)
T d1spxa_         156 -------------------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  198 (264)
T ss_dssp             -------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             -------------------------------------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence                                                 677899999999999999999998  58999999999999998


Q ss_pred             cCCCCCC-----Chh-----hhhccceeecccCCCCCcceEeccCcc-cCC
Q 023896          236 NFHAGIL-----SVE-----EGAESPVKLALLPDGGPTGRFFLRKEE-APF  275 (275)
Q Consensus       236 ~~~~~~~-----~~~-----~~a~~~~~~~~~~~~~~~~~~~~~~~~-a~~  275 (275)
                      .......     ...     .....|++++.+|++.++...||++++ ++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~  249 (264)
T d1spxa_         199 GSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSY  249 (264)
T ss_dssp             --------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             hhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCC
Confidence            6543110     000     012357788888888888888888754 554

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.1e-45  Score=310.36  Aligned_cols=224  Identities=23%  Similarity=0.242  Sum_probs=193.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||++++++|+++|++|++++|+.+++++..+++..      +..++++|++++++++++++++.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCT------TEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------CeEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999998888877632      277889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||++|+||||||.....++.+.+.++|++.+++|+.++|+++|+++|+|+++ +|+|||+||+.+..+.          
T Consensus        77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~----------  145 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPI----------  145 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCC----------
T ss_pred             HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCc----------
Confidence            99999999999999888888899999999999999999999999999999765 4899999999887665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++..+|++||+|+.+|+|+++.|+    .+||||+|+||+|+|++...
T Consensus       146 --------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~  193 (253)
T d1hxha_         146 --------------------------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             --------------------------------cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh
Confidence                                            778899999999999999999998    35999999999999998632


Q ss_pred             CC--CCChhhhh----ccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AG--ILSVEEGA----ESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~--~~~~~~~a----~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..  ....+...    ..++++..+|++.+....||+++.++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  236 (253)
T d1hxha_         194 SLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV  236 (253)
T ss_dssp             HSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred             hCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCC
Confidence            11  11122221    234566777788888888888887775

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.9e-45  Score=313.29  Aligned_cols=228  Identities=25%  Similarity=0.298  Sum_probs=190.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+....++..+++|++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998776555569999999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchh----hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec-CccccCCCcHH
Q 023896           82 TQFGKLDILTKGDAEVDWSKV----CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS-YVSALKDLPEK  156 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS-~~~~~~~~~~~  156 (275)
                      ++||+||+||||||.....++    .+.+.+.|++.+++|+.++++++|+++|+|++++ |++|+++| .++..+.    
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~----  155 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----  155 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC----
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCC----
Confidence            999999999999998665443    3566778999999999999999999999998765 56666655 4455544    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|++||+|+.+|+|++|.|+  .|||||+|+||+|+|+
T Consensus       156 --------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  197 (272)
T d1xkqa_         156 --------------------------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  197 (272)
T ss_dssp             --------------------------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             --------------------------------------CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence                                                  778899999999999999999999  6899999999999999


Q ss_pred             CcCCCCCCCh----------hhhhccceeecccCCCCCcceEeccCcc
Q 023896          235 INFHAGILSV----------EEGAESPVKLALLPDGGPTGRFFLRKEE  272 (275)
Q Consensus       235 ~~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~~~  272 (275)
                      |.........          ......|++++.+|++.++...||++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~  245 (272)
T d1xkqa_         198 FTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN  245 (272)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             hhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            8654321100          0012346777777888888888887755

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-44  Score=311.92  Aligned_cols=231  Identities=23%  Similarity=0.247  Sum_probs=197.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+....++..+++|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999988766555689999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccc--hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           83 QFGKLDILTKGDAEVDWS--KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      +||+||++|||||.....  ...+.+.++|++.+++|+.++|.++|++.|+|.++++++|+++||.++..+.        
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~--------  152 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--------  152 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC--------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC--------
Confidence            999999999999975443  3345688999999999999999999999999998888899999887776554        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+|+.+|+|++|.|+  .|||||+|+||+|+|++...
T Consensus       153 ----------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~  198 (274)
T d1xhla_         153 ----------------------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA  198 (274)
T ss_dssp             ----------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHH
T ss_pred             ----------------------------------CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhh
Confidence                                              678899999999999999999999  58999999999999998643


Q ss_pred             CCCCC--hhh--------hhccceeecccCCCCCcceEeccCc-ccCC
Q 023896          239 AGILS--VEE--------GAESPVKLALLPDGGPTGRFFLRKE-EAPF  275 (275)
Q Consensus       239 ~~~~~--~~~--------~a~~~~~~~~~~~~~~~~~~~~~~~-~a~~  275 (275)
                      .....  .++        ....|++++.+|+++++...||+++ .++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~  246 (274)
T d1xhla_         199 MGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSY  246 (274)
T ss_dssp             TTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             hcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccC
Confidence            32110  000        1234778888888888888888874 4654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-44  Score=309.39  Aligned_cols=237  Identities=22%  Similarity=0.237  Sum_probs=198.8

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.  ++..+++|++++++++++++++.
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--KTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--ceEEEEccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999988888877654322  28899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+ ...++|++++|.......        
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~--------  154 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN--------  154 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccc--------
Confidence            99999999999999988888889999999999999999999999999999854 455677777776554322        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                 .....+.++...|+++|+|+.+++|.++.|+  .|||||+|+||+|+|++...
T Consensus       155 ---------------------------~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~  207 (260)
T d1h5qa_         155 ---------------------------QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH  207 (260)
T ss_dssp             ---------------------------EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             ---------------------------ccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc
Confidence                                       0001122567889999999999999999998  68999999999999999754


Q ss_pred             CCCCC-hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILS-VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ...-. .......|++++.+|++.++...||+++.++|
T Consensus       208 ~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  245 (260)
T d1h5qa_         208 MDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY  245 (260)
T ss_dssp             SCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence            32111 11223568888999999999999999998876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.6e-44  Score=306.76  Aligned_cols=228  Identities=28%  Similarity=0.281  Sum_probs=197.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.+++...+..   +.++++|++++++++++++++.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~---~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---ceEEEeecCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999988877654   88899999999999999999999


Q ss_pred             hc-CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QF-GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++ +.+|+||||||.....++.+.+.++|++++++|+.++|++.+++.|.|.+++.|+||++||..+..+.         
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~---------  150 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------  150 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------
T ss_pred             HhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc---------
Confidence            99 58999999999988888889999999999999999999999999999999999999999999887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       +....|+++|+|+++|+|.+++|+  .+||||+|+||+|+|+|....
T Consensus       151 ---------------------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~  197 (258)
T d1ae1a_         151 ---------------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  197 (258)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             ---------------------------------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh
Confidence                                             778999999999999999999998  589999999999999987543


Q ss_pred             CC---CChhh----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GI---LSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~---~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..   ...+.    ....|++++.+|++.+....|++++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~  240 (258)
T d1ae1a_         198 IKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  240 (258)
T ss_dssp             ------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            21   11111    12357788888888888888888888775

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-44  Score=301.12  Aligned_cols=212  Identities=22%  Similarity=0.254  Sum_probs=191.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++.||++|||||++|||++++++|+++|++|++++|+.++++++.+++...+..   +..+.||++++++++++++++.
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~---~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999876544   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|++|++|||||...+..+.+.+.+.|++++++|++|+++++++++|.|++++.|+||++||..+..+.         
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~---------  150 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV---------  150 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH---------
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC---------
Confidence            99999999999999988888888999999999999999999999999999999999999999999988764         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-----CCeEEEeecCCeeecCCc
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-----PKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-----~~i~vn~v~pG~v~T~~~  236 (275)
                                                       ++...|++||+|+.+|+++|+.|+     +||+||+|+||+|+|+|.
T Consensus       151 ---------------------------------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~  197 (244)
T d1yb1a_         151 ---------------------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  197 (244)
T ss_dssp             ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             ---------------------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh
Confidence                                             567899999999999999999985     479999999999999987


Q ss_pred             CCC-----CCCChhhhhccceeecccC
Q 023896          237 FHA-----GILSVEEGAESPVKLALLP  258 (275)
Q Consensus       237 ~~~-----~~~~~~~~a~~~~~~~~~~  258 (275)
                      ...     ...+|++.++.++..+...
T Consensus       198 ~~~~~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         198 KNPSTSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             TCTHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             hCcCccccCCCCHHHHHHHHHHHHhcC
Confidence            542     3468888888776655443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-44  Score=305.99  Aligned_cols=234  Identities=19%  Similarity=0.215  Sum_probs=195.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+..+++++.++++..+.. .++.+++||++++++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEEEccCCCHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999999999999876543 24889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccccCCCcHHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKAR  158 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~~~~~~~~~~  158 (275)
                      .++||+||+||||||.....++.+.+.++|++.+++|+.++|++.++++|.|++++  .|+||++||.++....      
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------  157 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------  157 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC------
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC------
Confidence            99999999999999998888888999999999999999999999999999987654  6899999998876432      


Q ss_pred             hhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecC
Q 023896          159 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~  234 (275)
                                                        +.+....|+++|+++.+++|+++.|+    .+||||+|+||+++|+
T Consensus       158 ----------------------------------p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         158 ----------------------------------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             ----------------------------------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----------------------------------CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence                                              11345679999999999999999986    5899999999999999


Q ss_pred             CcCCCCCCChhh-hhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGILSVEE-GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +........+++ ....++.+..+|+++++..+||+++.++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~  245 (257)
T d1xg5a_         204 FAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI  245 (257)
T ss_dssp             HHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTE
T ss_pred             hhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcC
Confidence            864332222222 23345666666666666666666666553

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-44  Score=309.81  Aligned_cols=230  Identities=23%  Similarity=0.235  Sum_probs=199.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC--CCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV--DPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.....  ...++..+++|++++++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999988875422  2335889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.||+||+||||||.....++.+.+.++|++.+++|+.++|+++|+++|.|.+++.++||++||. +..+.        
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~--------  159 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGF--------  159 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCC--------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccc--------
Confidence            999999999999999988888889999999999999999999999999999998888999998763 33222        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+|+.+|+|++|.|+  .|||||+|+||+|+|++...
T Consensus       160 ----------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  205 (297)
T d1yxma1         160 ----------------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE  205 (297)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT
T ss_pred             ----------------------------------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhh
Confidence                                              678899999999999999999999  58999999999999998643


Q ss_pred             CCCCChhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .....+++     ....|++++.+|+++++.+.||+++.++|
T Consensus       206 ~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~  247 (297)
T d1yxma1         206 NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF  247 (297)
T ss_dssp             TSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             hccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            22111111     23457888889999999999999998876

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=7.9e-44  Score=306.78  Aligned_cols=225  Identities=20%  Similarity=0.179  Sum_probs=189.9

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      ++..+++|++++++++++++++.
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~   74 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD------NVLGIVGDVRSLEDQKQAASRCV   74 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------CeeEEecccccHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999988877766532      28899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccch-----hhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           82 TQFGKLDILTKGDAEVDWSK-----VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ++||++|++|||||+.....     ..+.+.+.|+++|++|+.++|+++|+++|.|++++ |+||+++|..+..+.    
T Consensus        75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~----  149 (276)
T d1bdba_          75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN----  149 (276)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT----
T ss_pred             HHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC----
Confidence            99999999999999754332     12344567999999999999999999999998765 899999998887664    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~  235 (275)
                                                            ++...|+++|+|+.+|+|++|.|+ ++||||+|+||+|+|+|
T Consensus       150 --------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~  191 (276)
T d1bdba_         150 --------------------------------------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL  191 (276)
T ss_dssp             --------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred             --------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCc
Confidence                                                  678899999999999999999998 78999999999999998


Q ss_pred             cCCCCC------CCh-----hhhhccceeecccCCCCCcceEeccC-cccCC
Q 023896          236 NFHAGI------LSV-----EEGAESPVKLALLPDGGPTGRFFLRK-EEAPF  275 (275)
Q Consensus       236 ~~~~~~------~~~-----~~~a~~~~~~~~~~~~~~~~~~~~~~-~~a~~  275 (275)
                      ......      ...     ......|++++.+|++.+....||++ +.++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~  243 (276)
T d1bdba_         192 RGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAP  243 (276)
T ss_dssp             CCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTT
T ss_pred             CCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence            643210      111     11234688899999999999988887 45665

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-44  Score=302.12  Aligned_cols=220  Identities=21%  Similarity=0.174  Sum_probs=188.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.    .   +..+++|+++++++++++    +
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~---~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----G---IEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T---CEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----C---CeEEEEeCCCHHHHHHHH----H
Confidence            5699999999999999999999999999999999999998887766543    1   678899999999976655    5


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhh-hcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      ++|+||+||||||.....++.+.+.++|++.+++|+.++++++++++|.| ++++.|+||++||..+..+.         
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------  143 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---------  143 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc---------
Confidence            67999999999999888888899999999999999999999999999975 45567999999998887654         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++...|++||+|+++|+|+++.|+  .+||||+|+||+|+|++....
T Consensus       144 ---------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~  190 (244)
T d1pr9a_         144 ---------------------------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT  190 (244)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT
T ss_pred             ---------------------------------cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh
Confidence                                             778899999999999999999999  589999999999999986543


Q ss_pred             CCCC---hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..-.   .....+.|++++.+|++.+....||.++.++|
T Consensus       191 ~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         191 WSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             SCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            2110   11113457788888888888888888888876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-44  Score=303.71  Aligned_cols=221  Identities=21%  Similarity=0.216  Sum_probs=188.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.    .   +..+++|+++++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~---~~~~~~Dv~~~~~v~~~~----   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----G---IEPVCVDLGDWDATEKAL----   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T---CEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----C---CeEEEEeCCCHHHHHHHH----
Confidence            57999999999999999999999999999999999999988877766542    1   778899999999876654    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhh-cCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      ++||+||+||||||.....++.+.+.++|++.+++|+.++++++|.+.|.|. ++.+|+||++||..+..+.        
T Consensus        70 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------  141 (242)
T d1cyda_          70 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------  141 (242)
T ss_dssp             TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred             HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC--------
Confidence            5689999999999998888899999999999999999999999999999865 4456899999998877654        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                        ++...|+++|+|+.+|+|+++.|+  .|||||+|+||+|+|++...
T Consensus       142 ----------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~  187 (242)
T d1cyda_         142 ----------------------------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK  187 (242)
T ss_dssp             ----------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH
T ss_pred             ----------------------------------CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh
Confidence                                              778899999999999999999999  58999999999999998643


Q ss_pred             CCCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ...-   ......+.|++++.+|++.+....||.++.++|
T Consensus       188 ~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~  227 (242)
T d1cyda_         188 VSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS  227 (242)
T ss_dssp             HTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            3110   111123457788888888888888888888776

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-43  Score=301.92  Aligned_cols=261  Identities=38%  Similarity=0.540  Sum_probs=203.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~-g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++.+++++..+.+   +.+++||+++.++++++++++.+++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS---PRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            55699999999999999999986 899999999999999999999877654   88899999999999999999999999


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCC--cHHHHhhhcc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL--PEKARAVLGD  163 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~~~~~~~~  163 (275)
                      +||+||||||+.......+.+.++|+..|++|++|++++++.++|.|++  .|+||++||+.+..+..  .+.....+..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcc
Confidence            9999999999987777777788999999999999999999999999965  47999999988764321  1111111111


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC------CCeEEEeecCCeeecCCcC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY------PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~------~~i~vn~v~pG~v~T~~~~  237 (275)
                      .............. +......+....  ...+...|++||+++.++++.+++++      .+|+||+|+||+|+|+|..
T Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         159 ETITEEELVGLMNK-FVEDTKKGVHQK--EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             SSCCHHHHHHHHHH-HHHHHHTTCTTT--TTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             cccchhhhcccccc-chhccccccccc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence            11111111111110 000111111111  11345679999999999999998886      3899999999999999998


Q ss_pred             CCCCCChhhhhccceeecccCCC--CCcceEeccCcccCC
Q 023896          238 HAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF  275 (275)
Q Consensus       238 ~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~a~~  275 (275)
                      .....+|++.++.+++++..+.+  ..+|+||..++..+|
T Consensus       236 ~~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~w  275 (275)
T d1wmaa1         236 PKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  275 (275)
T ss_dssp             TTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             CcccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEecC
Confidence            88888999999999998766654  568999987777666

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.9e-43  Score=299.43  Aligned_cols=217  Identities=14%  Similarity=0.079  Sum_probs=187.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      ++|||||++|||+++|++|+++|++|++++|+.++++++.....         ...++|++++++++++++++.++||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999999888776543322         124689999999999999999999999


Q ss_pred             cEEEcCCcccc-cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           88 DILTKGDAEVD-WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        88 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      |+||||||... ..++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+|||+||..+..+.              
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~--------------  138 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW--------------  138 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC--------------
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc--------------
Confidence            99999999754 467888999999999999999999999999999999888999999999887654              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCC---
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGI---  241 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~---  241 (275)
                                                  +....|++||+|+.+|+|+++.|+  .|||||+|+||+|+|++......   
T Consensus       139 ----------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~  190 (252)
T d1zmta1         139 ----------------------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP  190 (252)
T ss_dssp             ----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH
T ss_pred             ----------------------------ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccc
Confidence                                        677899999999999999999999  58999999999999998754311   


Q ss_pred             --CChhhh----hccceeecccCCCCCcceEeccCcccCC
Q 023896          242 --LSVEEG----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       242 --~~~~~~----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                        ..++..    ...+++++.+|++.++...||+++.++|
T Consensus       191 ~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  230 (252)
T d1zmta1         191 WKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDY  230 (252)
T ss_dssp             HTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred             ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              122221    2457888888999999999999988875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.5e-43  Score=295.27  Aligned_cols=222  Identities=23%  Similarity=0.229  Sum_probs=183.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   .+.++++|++++++++++++++.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EA---EAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CS---SEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CC---ceEEEEecCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998776655543   22   288899999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +||++|+||||||.....++.+.+.++|++++++|+++++.++|++.|+|.+  .+.|+++||.+.. +.          
T Consensus        76 ~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~~-~~----------  142 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAGL-GA----------  142 (241)
T ss_dssp             HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTTC-CH----------
T ss_pred             HhCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc--ccceeeccccccc-cc----------
Confidence            9999999999999988888889999999999999999999999999999864  3466666664432 21          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|+++|+|+++|+|+++.|+  .|||||+|+||+|+|++.....
T Consensus       143 --------------------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~  190 (241)
T d2a4ka1         143 --------------------------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP  190 (241)
T ss_dssp             --------------------------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC
T ss_pred             --------------------------------cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh
Confidence                                            446789999999999999999998  5899999999999999875432


Q ss_pred             CCChh-hhhccceeecccCCCCCcceEeccCcccCC
Q 023896          241 ILSVE-EGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       241 ~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .-..+ ...+.+++++.+|+++++...||.++.++|
T Consensus       191 ~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         191 PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY  226 (241)
T ss_dssp             HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence            11111 123567888888888888888888888776

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-41  Score=295.53  Aligned_cols=218  Identities=15%  Similarity=0.099  Sum_probs=185.2

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC---------hhHHHHHHHHHHhcCCCCCceeEEEecccChHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD---------EKRGLEAVEKLKASGVDPELLLFHQLDISDLAS   72 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   72 (275)
                      |+++||++|||||++|||+++|++|+++|++|++++|+         ...+++..+++...      .....+|+++.++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~~~~~   76 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR------GGKAVANYDSVEA   76 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT------TCEEEEECCCGGG
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc------ccccccccchHHH
Confidence            57899999999999999999999999999999998664         44566666676654      3456789999999


Q ss_pred             HHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           73 VSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        73 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      ++++++++.++||+||+||||||+....++.+.+.++|++.+++|+.|+|+++|+++|+|++++.|+|||+||+.+..+.
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~  156 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  156 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence            99999999999999999999999988888999999999999999999999999999999999888999999998887665


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                ++...|++||+|+.+|+|+++.|+  .|||||+|+||+
T Consensus       157 ------------------------------------------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~  194 (302)
T d1gz6a_         157 ------------------------------------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNA  194 (302)
T ss_dssp             ------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEC
T ss_pred             ------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCC
Confidence                                                      778999999999999999999999  689999999999


Q ss_pred             eecCCcCCCC-----CCChhhhhccceeecccCCCCCcceEec
Q 023896          231 VKTDINFHAG-----ILSVEEGAESPVKLALLPDGGPTGRFFL  268 (275)
Q Consensus       231 v~T~~~~~~~-----~~~~~~~a~~~~~~~~~~~~~~~~~~~~  268 (275)
                      +.|++.....     ..+|++.+..++++..... ..+|..+.
T Consensus       195 ~~t~~~~~~~~~~~~~~~PedvA~~v~fL~S~~a-~itG~~i~  236 (302)
T d1gz6a_         195 GSRMTETVMPEDLVEALKPEYVAPLVLWLCHESC-EENGGLFE  236 (302)
T ss_dssp             CSTTTGGGSCHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEEE
T ss_pred             CCcchhhcCcHhhHhcCCHHHHHHHHHHHcCCCc-CCCCcEEE
Confidence            9887654321     2466777776666554322 23444443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.2e-41  Score=290.64  Aligned_cols=227  Identities=26%  Similarity=0.294  Sum_probs=194.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe-cChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+.||+||||||++|||++++++|+++|++|++++ |+.+.++...++++..+.+   +..+++|++++++++++++++.
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~---~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCC---ceEecCCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999876 5556677888888776654   8899999999999999999999


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +++|+||++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|+++  +++++++|..+...          
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~----------  147 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMT----------  147 (259)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCC----------
T ss_pred             HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Cccccccccccccc----------
Confidence            999999999999999888888899999999999999999999999999999754  67888887665432          


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC-
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-  238 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~-  238 (275)
                                                     +.+....|+++|+|+++|+|.+++|+  .+||||+|+||+|+|+|.+. 
T Consensus       148 -------------------------------~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~  196 (259)
T d1ja9a_         148 -------------------------------GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDEN  196 (259)
T ss_dssp             -------------------------------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             -------------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhh
Confidence                                           12678899999999999999999998  58999999999999997521 


Q ss_pred             --------CCCCChhhh-----hccceeecccCCCCCcceEeccCcccCC
Q 023896          239 --------AGILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 --------~~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                              ....++++.     ...+++++.+|++++....||.++.++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~  246 (259)
T d1ja9a_         197 SWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEW  246 (259)
T ss_dssp             GGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                    112333332     3467888888999999999999998876

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-42  Score=293.35  Aligned_cols=183  Identities=26%  Similarity=0.341  Sum_probs=164.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+... ..++.++++|++++++++++++++.++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            699999999999999999999999999999999999999999888876532 2348899999999999999999999999


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHHHhhh
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      |+||+||||||...        .++|++.+++|+.+++.+.+.++|+|.+++   +|+||++||.++..+.         
T Consensus        81 G~iDilVnnAg~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~---------  143 (254)
T d2gdza1          81 GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV---------  143 (254)
T ss_dssp             SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------
T ss_pred             CCcCeecccccccc--------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC---------
Confidence            99999999999754        356899999999999999999999998664   3789999999888665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHH--HHHhC--CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI--LAKRY--PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~--~a~~~--~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++..+|++||+|+.+|+|+  ++.|+  .+||||+|+||+|+|+|..
T Consensus       144 ---------------------------------~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~  190 (254)
T d2gdza1         144 ---------------------------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE  190 (254)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred             ---------------------------------CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhh
Confidence                                             7788999999999999997  68787  6899999999999999864


Q ss_pred             C
Q 023896          238 H  238 (275)
Q Consensus       238 ~  238 (275)
                      .
T Consensus       191 ~  191 (254)
T d2gdza1         191 S  191 (254)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-41  Score=287.91  Aligned_cols=225  Identities=22%  Similarity=0.229  Sum_probs=181.7

Q ss_pred             ccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++||++|||||+|  |||++++++|+++|++|++++|+.+..+... ++......   ...+++|++++++++++++++
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEALGG---ALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHTTC---CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-HhhhccCc---ccccccccCCHHHHHHHHHHH
Confidence            45899999999987  9999999999999999999999976555443 33333333   678899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccc----hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDWS----KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .++||+||+||||||.....    ++.+.+.++|+..+++|+.+++.++|++.|.|++  +|+||++||..+..+.    
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~----  154 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVV----  154 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBC----
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCC----
Confidence            99999999999999875432    3456788899999999999999999999999964  4899999998887664    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|+++|+|+++++|++|.|+  .|||||+|+||+|+|+
T Consensus       155 --------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~  196 (256)
T d1ulua_         155 --------------------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTV  196 (256)
T ss_dssp             --------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred             --------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeec
Confidence                                                  778899999999999999999999  5899999999999999


Q ss_pred             CcCCCCCCC---hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +........   .......|+++..+|++.++...||.++.++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  240 (256)
T d1ulua_         197 AARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG  240 (256)
T ss_dssp             -------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             cccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            875432111   11123467888888888888889999888876

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-40  Score=283.92  Aligned_cols=224  Identities=20%  Similarity=0.154  Sum_probs=188.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHH---CCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~---~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.+++...... .++..+++|++++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD-LKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT-SEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCC-ceEEEEEccCCCHHHHHHHHH
Confidence            368899999999999999999999986   7999999999999999999998865443 248899999999999999999


Q ss_pred             HHHhh----cCCccEEEcCCcccc---cchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC--CCeEEEEecCccc
Q 023896           79 FIKTQ----FGKLDILTKGDAEVD---WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSA  149 (275)
Q Consensus        79 ~~~~~----~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~vsS~~~~  149 (275)
                      ++.+.    ++.+|++|||||...   ..++.+.+.++|+++|++|+.++++++|+++|+|++++  .|+||++||.++.
T Consensus        81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence            88763    458999999998743   34566789999999999999999999999999998775  4799999999887


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCC
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPG  229 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG  229 (275)
                      .+.                                          ++...|++||+|+++|+|+++.|.++||||+|+||
T Consensus       161 ~~~------------------------------------------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG  198 (259)
T d1oaaa_         161 QPY------------------------------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPG  198 (259)
T ss_dssp             SCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             CCC------------------------------------------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcC
Confidence            665                                          77899999999999999999999999999999999


Q ss_pred             eeecCCcCCC--------------------CCCChhhhhccceeecccCCCCCcceEecc
Q 023896          230 FVKTDINFHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  269 (275)
Q Consensus       230 ~v~T~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  269 (275)
                      +|+|+|....                    ...+|++.++.++.++.. ..-.+|..+..
T Consensus       199 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         199 PLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             SBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             CCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            9999975311                    134677777777766643 23456665543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.2e-41  Score=286.47  Aligned_cols=227  Identities=25%  Similarity=0.315  Sum_probs=178.6

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +...  .++.++++|++++++++++++++.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~   74 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKD--SRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCCC--TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----HhhC--CceEEEEEecCCHHHHHHHHHHHH
Confidence            4569999999999999999999999996  6889999998766543    2222  238999999999999999999999


Q ss_pred             hhcC--CccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC-----------CCeEEEEecCc
Q 023896           82 TQFG--KLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-----------SPRLVNLSSYV  147 (275)
Q Consensus        82 ~~~g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----------~g~iv~vsS~~  147 (275)
                      +.++  +||+||||||+... .+..+.+.++|++.|++|++|++.+++.++|+|++++           .+++++++|..
T Consensus        75 ~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             HHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence            9876  49999999997543 5566788999999999999999999999999997542           37899999876


Q ss_pred             cccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEe
Q 023896          148 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNC  225 (275)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~  225 (275)
                      +.....                                   ....+..+...|++||+|+.+|++.++.|+  .+|+||+
T Consensus       155 ~~~~~~-----------------------------------~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~  199 (250)
T d1yo6a1         155 GSITDN-----------------------------------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVN  199 (250)
T ss_dssp             GCSTTC-----------------------------------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEE
T ss_pred             ccccCC-----------------------------------cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            654321                                   001122345679999999999999999999  6899999


Q ss_pred             ecCCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          226 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       226 v~pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      |+||+|+|+|......+++++.++.++..+..+....+|+||..+.
T Consensus       200 i~PG~v~T~m~~~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         200 FCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             EECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             EecCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            9999999999887788999999999999888888889999998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.7e-40  Score=281.60  Aligned_cols=222  Identities=21%  Similarity=0.279  Sum_probs=188.1

Q ss_pred             CEEEEecCCCchhHHHHHHHH---HCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh-
Q 023896            7 KYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT-   82 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~---~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-   82 (275)
                      |+||||||++|||+++|++|+   ++|++|++++|+.++++++.+ +.....+   +.++++|++++++++++++++.+ 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~---~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSN---IHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTT---EEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCc---EEEEEEEeccHHHHHHHHhhhHHH
Confidence            689999999999999999996   579999999999998877644 3333332   88999999999999999998854 


Q ss_pred             -hcCCccEEEcCCcccccc-hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-----------CCCeEEEEecCccc
Q 023896           83 -QFGKLDILTKGDAEVDWS-KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----------DSPRLVNLSSYVSA  149 (275)
Q Consensus        83 -~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----------~~g~iv~vsS~~~~  149 (275)
                       .+++||+||||||+.... ++.+.+.++|++++++|++|++.++++++|+|+++           ..|++|+++|+.+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence             678999999999986553 46678899999999999999999999999999753           35899999998877


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeec
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVC  227 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~  227 (275)
                      ...                                       .+.++...|++||+|+++|++.++.++  .+|+||+|+
T Consensus       159 ~~~---------------------------------------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~  199 (248)
T d1snya_         159 IQG---------------------------------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLH  199 (248)
T ss_dssp             STT---------------------------------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred             cCC---------------------------------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            542                                       122556789999999999999999998  589999999


Q ss_pred             CCeeecCCcCCCCCCChhhhhccceeecccCCCCCcceEeccCc
Q 023896          228 PGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  271 (275)
Q Consensus       228 pG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  271 (275)
                      ||+|+|+|......+.+++.++.++..+.......+|.||.+++
T Consensus       200 PG~v~T~m~~~~~~~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG  243 (248)
T d1snya_         200 PGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG  243 (248)
T ss_dssp             CCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred             CCcccCCcccccCCCCchHHHHHHHHHHHhcCccCCCcEEEECC
Confidence            99999999988777888888888777776666667899997644

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.8e-41  Score=290.20  Aligned_cols=228  Identities=27%  Similarity=0.333  Sum_probs=195.1

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh-hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++++||++|||||++|||++++++|+++|++|++++|+. +.++.+.+++...+..   +.++++|+++++++.++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~---~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCc---eeeEeCCCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999998875 5667777777776554   889999999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.||+||++|||+|.....++.+.+.++|++.+++|+.+++.++|++.|+|.+  .|++++++|+.+...         
T Consensus        91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~---------  159 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAK---------  159 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCS---------
T ss_pred             HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccc---------
Confidence            999999999999999988888889999999999999999999999999999964  479999998765532         


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      +.++...|+++|+|+++|+|+++.|+  .+||||+|+||+|+|++...
T Consensus       160 --------------------------------~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         160 --------------------------------AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             --------------------------------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             --------------------------------cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHH
Confidence                                            22667889999999999999999999  68999999999999997522


Q ss_pred             C--------CCCChhh------hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 A--------GILSVEE------GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~--------~~~~~~~------~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .        .....++      ....|++++.+|++++....||+++.++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~  258 (272)
T d1g0oa_         208 VCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGW  258 (272)
T ss_dssp             HGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            1        1122222      13467888888888888899998888876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.8e-42  Score=287.16  Aligned_cols=212  Identities=18%  Similarity=0.224  Sum_probs=178.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++       ..     ...+.+|+++.      ++.+.++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~-----~~~~~~Dv~~~------~~~~~~~   63 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG-----HRYVVCDLRKD------LDLLFEK   63 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC-----SEEEECCTTTC------HHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC-----CcEEEcchHHH------HHHHHHH
Confidence            589999999999999999999999999999999999865432       21     44678999864      4556678


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      +++||+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||+++|..+..+.           
T Consensus        64 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~-----------  132 (234)
T d1o5ia_          64 VKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------  132 (234)
T ss_dssp             SCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             hCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc-----------
Confidence            899999999999888888889999999999999999999999999999998888999999998776554           


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGI  241 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~  241 (275)
                                                     +....|+++|+|+.+|+|++|.|+  .|||||+|+||+++|++......
T Consensus       133 -------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~  181 (234)
T d1o5ia_         133 -------------------------------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS  181 (234)
T ss_dssp             -------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC
T ss_pred             -------------------------------cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC
Confidence                                           778899999999999999999998  58999999999999998643211


Q ss_pred             --CChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          242 --LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       242 --~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                        .......+.|++++.+|++.+....||+++.++|
T Consensus       182 ~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~  217 (234)
T d1o5ia_         182 EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY  217 (234)
T ss_dssp             HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence              0011123467788888888888888888887775

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.5e-40  Score=281.43  Aligned_cols=184  Identities=20%  Similarity=0.265  Sum_probs=160.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEeccc-ChHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLADFI   80 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~   80 (275)
                      |+++||+||||||++|||+++|++|+++|++|++++|+.++.+...+.......  ..+.++.+|++ +.++++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK--VNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTT--SEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCC--CCEEEEEeecCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999999999887776555433333332  23889999998 667899999999


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCC---CCeEEEEecCccccCCCcHHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEKA  157 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~iv~vsS~~~~~~~~~~~~  157 (275)
                      .+++|+||+||||||..        +.+.|++++++|++|+++++++++|+|.+++   .|+||++||.++..+.     
T Consensus        79 ~~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~-----  145 (254)
T d1sbya1          79 FDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----  145 (254)
T ss_dssp             HHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC-----
Confidence            99999999999999954        5678999999999999999999999997653   5799999999887665     


Q ss_pred             HhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCC
Q 023896          158 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~  235 (275)
                                                           ++...|++||+|+.+|+++++.++  .+||||+|+||+|+|+|
T Consensus       146 -------------------------------------~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         146 -------------------------------------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             -------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             -------------------------------------CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence                                                 778899999999999999999998  68999999999999997


Q ss_pred             cC
Q 023896          236 NF  237 (275)
Q Consensus       236 ~~  237 (275)
                      .+
T Consensus       189 ~~  190 (254)
T d1sbya1         189 VH  190 (254)
T ss_dssp             HH
T ss_pred             cc
Confidence            53

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=286.84  Aligned_cols=222  Identities=20%  Similarity=0.217  Sum_probs=184.5

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |.+++||++|||||++|||+++++.|+++|++|++++|+++++++..+    .. .   +....+|+.+++.++    +.
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~~-~---~~~~~~d~~~~~~~~----~~   68 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YP-G---IQTRVLDVTKKKQID----QF   68 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----ST-T---EEEEECCTTCHHHHH----HH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cc-C---Cceeeeecccccccc----cc
Confidence            778999999999999999999999999999999999999876654432    11 1   677888888766644    45


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+.++++|+||||+|.....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||+.+...         
T Consensus        69 ~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------  139 (245)
T d2ag5a1          69 ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK---------  139 (245)
T ss_dssp             HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------
T ss_pred             ccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC---------
Confidence            55678999999999999888888999999999999999999999999999999888899999999876532         


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      +.++...|+++|+|+++|+|++|.|+  .|||||+|+||+|+|++...
T Consensus       140 --------------------------------~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         140 --------------------------------GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             --------------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             --------------------------------CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh
Confidence                                            11677899999999999999999999  58999999999999998642


Q ss_pred             CC--CCChhh-----hhccceeecccCCCCCcceEeccCcccCC
Q 023896          239 AG--ILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       239 ~~--~~~~~~-----~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ..  ...+++     ....|+++..+|++.+....||++++++|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~  231 (245)
T d2ag5a1         188 RIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (245)
T ss_dssp             HHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            11  111111     13467778888888888888888887765

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=8.6e-40  Score=283.83  Aligned_cols=229  Identities=17%  Similarity=0.096  Sum_probs=191.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+..++++..+++....+.  ++..+++|++++++++++++.+.+
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~--~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--KVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCC--ceEEEEecccChHHHHHHhhhhhh
Confidence            789999999999999999999999999999999999999999988888765433  288999999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      .++++|+||||||.....++...+.++|.+.+.+|+.+.+.+.+...+.+.. ...+.+++++|..+..+.         
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~---------  170 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------  170 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC---------
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc---------
Confidence            9999999999999988888888899999999999999999999888776654 445677888886655443         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~  239 (275)
                                                       ++..+|+++|+|+++|+|.+|.|+  .|||||+|+||+|+|++....
T Consensus       171 ---------------------------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  217 (294)
T d1w6ua_         171 ---------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR  217 (294)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             ---------------------------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhc
Confidence                                             677889999999999999999999  589999999999999986543


Q ss_pred             CCCC----hhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          240 GILS----VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       240 ~~~~----~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ....    .+.....|++++.+|++.++.+.||+++.++|
T Consensus       218 ~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~  257 (294)
T d1w6ua_         218 LDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW  257 (294)
T ss_dssp             CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             cCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            2111    11223568888888888888899998888775

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=281.18  Aligned_cols=210  Identities=23%  Similarity=0.197  Sum_probs=174.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEE---EEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVV---LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi---~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .|+||||||++|||+++|++|+++|++|+   .+.|+.+..+...+..........++..+++|++++++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            68899999999999999999999998744   456776655555544444333334599999999999999999987743


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                        |.+|++|||+|.....++.+.+.++|++.+++|+.|+++++++++|+|++++.|+|||+||+++..+.          
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~----------  149 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----------  149 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC----------
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC----------
Confidence              79999999999988888889999999999999999999999999999998888999999999988765          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  240 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~  240 (275)
                                                      ++...|++||+|+++|+++++.|+  .|||||+|+||+|+|+|.....
T Consensus       150 --------------------------------~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~  197 (285)
T d1jtva_         150 --------------------------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL  197 (285)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhc
Confidence                                            778899999999999999999998  5899999999999999875321


Q ss_pred             --------------------------------CCChhhhhccceeecccCC
Q 023896          241 --------------------------------ILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       241 --------------------------------~~~~~~~a~~~~~~~~~~~  259 (275)
                                                      ..+|++.|+.++.++..+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         198 GSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             cCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence                                            2367788887777666544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-38  Score=272.07  Aligned_cols=209  Identities=22%  Similarity=0.264  Sum_probs=184.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.......  ...+.+|+++.+.+..+.+++.+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~   88 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS--AHYIAGTMEDMTFAEQFVAQAGK   88 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSE--EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhccc--chhhhhhhhhHHHHHHHHHHHHH
Confidence            3799999999999999999999999999999999999999999988877654432  78889999999999999999999


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      .++.+|+++||||......+.+.+.++|++.+++|+.+++.+++.++|.|+++ +|+||++||.++..+.          
T Consensus        89 ~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~----------  157 (269)
T d1xu9a_          89 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY----------  157 (269)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC----------
T ss_pred             HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCC----------
Confidence            99999999999998887777788999999999999999999999999999754 5899999999888665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++...|++||+|+++|+++++.|+    .+|+||+|+||+|+|+|...
T Consensus       158 --------------------------------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         158 --------------------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             --------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence                                            788999999999999999999997    36999999999999998531


Q ss_pred             -------CCCCChhhhhccceeecc
Q 023896          239 -------AGILSVEEGAESPVKLAL  256 (275)
Q Consensus       239 -------~~~~~~~~~a~~~~~~~~  256 (275)
                             ....++++.++.++....
T Consensus       206 ~~~~~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         206 AVSGIVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HSCGGGGGGCBCHHHHHHHHHHHHH
T ss_pred             hccCCccccCCCHHHHHHHHHHHhh
Confidence                   124578888877665443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-38  Score=265.05  Aligned_cols=220  Identities=20%  Similarity=0.177  Sum_probs=177.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...      .....+|+.+.+.++...+++..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN------CVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT------EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC------ccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999988888777432      77889999999999999999999


Q ss_pred             hcCCccEEEcCCccccc------chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC------CCCeEEEEecCcccc
Q 023896           83 QFGKLDILTKGDAEVDW------SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS------DSPRLVNLSSYVSAL  150 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~g~iv~vsS~~~~~  150 (275)
                      .+..+|.+++|++....      .+..+.+.+.|++.+++|+.++|+++|++.|.|..+      ++|+||++||+.+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            99999999988755332      344567789999999999999999999999987643      468999999998876


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecC
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCP  228 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~p  228 (275)
                      +.                                          ++..+|+++|+|+++|+|+++.|+  .|||||+|+|
T Consensus       156 ~~------------------------------------------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~P  193 (248)
T d2o23a1         156 GQ------------------------------------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP  193 (248)
T ss_dssp             CC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeecc
Confidence            54                                          778999999999999999999998  5899999999


Q ss_pred             CeeecCCcCCCCCCChhhh-hccce-eecccCCCCCcceEeccC
Q 023896          229 GFVKTDINFHAGILSVEEG-AESPV-KLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       229 G~v~T~~~~~~~~~~~~~~-a~~~~-~~~~~~~~~~~~~~~~~~  270 (275)
                      |+++|+|......-..++. .+.++ +++.+|++++....|+.+
T Consensus       194 G~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s  237 (248)
T d2o23a1         194 GLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE  237 (248)
T ss_dssp             CCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH
T ss_pred             CceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence            9999998754321111111 22333 666667777666666654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.1e-35  Score=255.98  Aligned_cols=226  Identities=15%  Similarity=0.133  Sum_probs=165.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecC-hhHHHHHHHHHHhcCCCC---------------CceeEEEecccCh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDP---------------ELLLFHQLDISDL   70 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~-~~~~~~~~~~l~~~~~~~---------------~~~~~~~~Dl~~~   70 (275)
                      +++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.......               .......+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            589999999999999999999999999998765 556677777776544332               0122345679999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhH--------------HHHhHHhhcccHHHHHHHHhhhh----
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYEL--------------AVECLKTNYYGTKQTCEALIPLL----  132 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~--------------~~~~~~~N~~~~~~l~~~~~~~~----  132 (275)
                      ++++++++++.++||+||+||||||.....++.+.+.++              +...|.+|+.+++++.+.+.+.+    
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            999999999999999999999999987766555444444              44579999999999999987653    


Q ss_pred             --hcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHH
Q 023896          133 --ELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  210 (275)
Q Consensus       133 --~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  210 (275)
                        .+...++||+++|..+..+.                                          ++..+|+++|+|+.+|
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~------------------------------------------~~~~~Y~asKaal~~l  200 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPL------------------------------------------LGYTIYTMAKGALEGL  200 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCC------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcccccccccccCCc------------------------------------------cceeeeccccccchhh
Confidence              34445789999997776554                                          6788999999999999


Q ss_pred             HHHHHHhC--CCeEEEeecCCeeecCCcCCCCCCChhhhhccc-eeecccCCCCCcceEeccCcccCC
Q 023896          211 TRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESP-VKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       211 ~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +|.++.|+  .|||||+|+||++.+....... .......+.+ .+++.+|++.+....||.++.++|
T Consensus       201 t~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~-~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~  267 (284)
T d1e7wa_         201 TRSAALELAPLQIRVNGVGPGLSVLVDDMPPA-VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKY  267 (284)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCCGGGSCHH-HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHhCCccccccccccccccccccCCHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999  5899999999986654321100 0001112233 256666666667777777666654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-35  Score=250.93  Aligned_cols=225  Identities=17%  Similarity=0.133  Sum_probs=183.6

Q ss_pred             ccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+.+..+.. +++....+.   ......|+++..++..+++++
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   77 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGS---DIVLQCDVAEDASIDTMFAEL   77 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCC---cceeecccchHHHHHHHHHHh
Confidence            47899999999998  899999999999999999999997654444 444433333   667889999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchh-----hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKV-----CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                      .+.++++|++|||++.......     .....+.|...+++|+.+.+.+++.+.+.+.+  ++.||++||..+..+.   
T Consensus        78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~---  152 (258)
T d1qsga_          78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAI---  152 (258)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC---
T ss_pred             hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCC---
Confidence            9999999999999987544332     34566789999999999999999999999853  4689999997776554   


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeec
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT  233 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T  233 (275)
                                                             +....|+++|+|++.|+|.++.|+  .+||||+|+||+|+|
T Consensus       153 ---------------------------------------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T  193 (258)
T d1qsga_         153 ---------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT  193 (258)
T ss_dssp             ---------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCC
T ss_pred             ---------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccc
Confidence                                                   677899999999999999999999  589999999999999


Q ss_pred             CCcCCCCCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          234 DINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       234 ~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      ++.......   ........|++++.+|++.++...||.++.++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~  238 (258)
T d1qsga_         194 LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  238 (258)
T ss_dssp             TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             ccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            997543211   111123467788888888888888888888765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-35  Score=259.12  Aligned_cols=227  Identities=14%  Similarity=0.249  Sum_probs=176.4

Q ss_pred             CCCEEEEec--CCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCC---------CceeEE----------
Q 023896            5 TKKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP---------ELLLFH----------   63 (275)
Q Consensus         5 ~~k~vlItG--a~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~---------~~~~~~----------   63 (275)
                      .+|++||||  +++|||+++++.|+++|++|++++++..................         ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  55899999999999999999999998875544443322211100         001122          


Q ss_pred             ----------EecccChHHHHHHHHHHHhhcCCccEEEcCCccccc--chhhccchhHHHHhHHhhcccHHHHHHHHhhh
Q 023896           64 ----------QLDISDLASVSSLADFIKTQFGKLDILTKGDAEVDW--SKVCYQTYELAVECLKTNYYGTKQTCEALIPL  131 (275)
Q Consensus        64 ----------~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  131 (275)
                                .+|+++.++++++++++.+.||+||+||||+|....  .++.+.+.++|++.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      247778899999999999999999999999987543  45778899999999999999999999999999


Q ss_pred             hhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCC-CchhhHhHHHHHHH
Q 023896          132 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAY  210 (275)
Q Consensus       132 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~  210 (275)
                      |++  +|+||++||..+..+.                                          |+ ...|+++|+++++|
T Consensus       161 m~~--~GsIv~iss~~~~~~~------------------------------------------p~y~~~y~asKaal~~l  196 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVV------------------------------------------PGYGGGMSSAKAALESD  196 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCC------------------------------------------TTCTTTHHHHHHHHHHH
T ss_pred             ccc--ccccccceeehhcccc------------------------------------------cccchhhhhhhcccccc
Confidence            964  5899999998776543                                          33 45799999999999


Q ss_pred             HHHHHHhC-C--CeEEEeecCCeeecCCcCCCC-----------------------------------------CCChh-
Q 023896          211 TRILAKRY-P--KFCVNCVCPGFVKTDINFHAG-----------------------------------------ILSVE-  245 (275)
Q Consensus       211 ~~~~a~~~-~--~i~vn~v~pG~v~T~~~~~~~-----------------------------------------~~~~~-  245 (275)
                      +|.++.|+ +  |||||+|+||+|+|+.....+                                         ....+ 
T Consensus       197 tr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (329)
T d1uh5a_         197 TRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDY  276 (329)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------------------------------------------CHHHH
T ss_pred             chhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHH
Confidence            99999998 4  899999999999995322100                                         00111 


Q ss_pred             ----hhhccceeecccCCCCCcceEeccCcccCC
Q 023896          246 ----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       246 ----~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                          .....|+++..+|+++++...||+++.++|
T Consensus       277 ~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~  310 (329)
T d1uh5a_         277 AIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRA  310 (329)
T ss_dssp             HHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence                112358888899999999999999998876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.1e-35  Score=245.03  Aligned_cols=206  Identities=12%  Similarity=0.065  Sum_probs=167.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +||+||||||++|||++++++|+++|++|++++++....             ........+|..+.++++.+.+++.+.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999876421             1114566778888888888888877765


Q ss_pred             C--CccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           85 G--KLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        85 g--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +  +||+||||||.... ....+.+.+.|++.+++|+.+++++++.++|+|++  +|+||++||.++..+.         
T Consensus        68 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~---------  136 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGT---------  136 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC---------
T ss_pred             CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCc---------
Confidence            4  79999999996544 33445677899999999999999999999999964  4899999998887665         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINF  237 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~  237 (275)
                                                       ++...|++||+|+++|+|+++.|+    ++||||+|+||+|+|+|.+
T Consensus       137 ---------------------------------~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~  183 (236)
T d1dhra_         137 ---------------------------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR  183 (236)
T ss_dssp             ---------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH
T ss_pred             ---------------------------------cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch
Confidence                                             778899999999999999999997    3899999999999999853


Q ss_pred             CC-------CCCChhhhhccceeecccCCCCCcceEe
Q 023896          238 HA-------GILSVEEGAESPVKLALLPDGGPTGRFF  267 (275)
Q Consensus       238 ~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  267 (275)
                      ..       ...+|++.++.+..++.......+|.++
T Consensus       184 ~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         184 KSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             HHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             hhCccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            21       2346777888877766554444555443

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.7e-34  Score=248.06  Aligned_cols=231  Identities=17%  Similarity=0.172  Sum_probs=176.0

Q ss_pred             cccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC---------CCCceeEEEec----
Q 023896            2 AEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV---------DPELLLFHQLD----   66 (275)
Q Consensus         2 ~~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~---------~~~~~~~~~~D----   66 (275)
                      ++|+||++|||||++  |||+++|++|+++|++|++++|+................         .........+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468999999999876  999999999999999999999987654333322211100         00001223333    


Q ss_pred             ----------------ccChHHHHHHHHHHHhhcCCccEEEcCCcccc--cchhhccchhHHHHhHHhhcccHHHHHHHH
Q 023896           67 ----------------ISDLASVSSLADFIKTQFGKLDILTKGDAEVD--WSKVCYQTYELAVECLKTNYYGTKQTCEAL  128 (275)
Q Consensus        67 ----------------l~~~~~v~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  128 (275)
                                      .++..+++++++++.++||+||+||||||...  ..++.+.+.++|++.+++|+.+++.+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            35666788999999999999999999998754  356778899999999999999999999999


Q ss_pred             hhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHH
Q 023896          129 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN  208 (275)
Q Consensus       129 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  208 (275)
                      ++.+.++  ++++++++......                                         ..+....|+++|+++.
T Consensus       164 ~~~~~~~--g~~~~~~~~~~~~~-----------------------------------------~~~~~~~y~~aKaa~~  200 (297)
T d1d7oa_         164 LPIMNPG--GASISLTYIASERI-----------------------------------------IPGYGGGMSSAKAALE  200 (297)
T ss_dssp             GGGEEEE--EEEEEEECGGGTSC-----------------------------------------CTTCTTTHHHHHHHHH
T ss_pred             HHHhhcC--Ccceeeeehhhccc-----------------------------------------ccccccceeccccccc
Confidence            9988654  56777777554422                                         1155678999999999


Q ss_pred             HHHHHHHHhC---CCeEEEeecCCeeecCCcCCCCCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          209 AYTRILAKRY---PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       209 ~~~~~~a~~~---~~i~vn~v~pG~v~T~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      .+++.++.++   .+||||+|+||+|+|++.......   ........|++++.+|++++..+.||+++.++|
T Consensus       201 ~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~  273 (297)
T d1d7oa_         201 SDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASA  273 (297)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTT
T ss_pred             ccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            9999999997   389999999999999997543111   011123457888888888888999999888876

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.4e-33  Score=236.88  Aligned_cols=205  Identities=14%  Similarity=0.059  Sum_probs=162.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh--h
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--Q   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~   83 (275)
                      +++||||||++|||++++++|+++|++|++++|+.....             .......+|+.+.+......+.+..  .
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHHHHHHHHHhc
Confidence            456799999999999999999999999999999875310             1144556777777777776666666  4


Q ss_pred             cCCccEEEcCCccccc-chhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           84 FGKLDILTKGDAEVDW-SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        84 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                      +++||+||||||.... .+..+.+.+.|+.++++|+.+++.++++++|+|++  +|+||++||..+..+.          
T Consensus        69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~----------  136 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPT----------  136 (235)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC----------
T ss_pred             CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCc----------
Confidence            5899999999997544 33445567889999999999999999999999964  4899999998887665          


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC----CCeEEEeecCCeeecCCcCC
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFH  238 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~----~~i~vn~v~pG~v~T~~~~~  238 (275)
                                                      ++...|++||+|+++|+++++.|+    .+|+||+|+||+++|++.+.
T Consensus       137 --------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~  184 (235)
T d1ooea_         137 --------------------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK  184 (235)
T ss_dssp             --------------------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred             --------------------------------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh
Confidence                                            778999999999999999999998    48999999999999997532


Q ss_pred             C-------CCCChhhhhccceeecccCC-CCCcceEe
Q 023896          239 A-------GILSVEEGAESPVKLALLPD-GGPTGRFF  267 (275)
Q Consensus       239 ~-------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~  267 (275)
                      .       ...+|++.++.++..+..+. ...+|.++
T Consensus       185 ~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         185 WMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             HSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             hCcCCccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence            1       23578888887765454433 33555544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4.2e-33  Score=238.88  Aligned_cols=225  Identities=17%  Similarity=0.171  Sum_probs=163.0

Q ss_pred             ccCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~--gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+.. +++..+++......   ..+.++|++++++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~---~~~~~~d~~~~~~~~~~~~~~   77 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS---PYVYELDVSKEEHFKSLYNSV   77 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc---eeEeeecccchhhHHHHHHHH
Confidence            47899999999865  9999999999999999999999964 44445555555444   677899999999999999999


Q ss_pred             HhhcCCccEEEcCCcccccchhh----ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHH
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVC----YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      .+.+|++|++|||+|........    ......+...+.++.++.+.+.+.+.+.+.  ..+.|+++|+.....+     
T Consensus        78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~-----  150 (274)
T d2pd4a1          78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKY-----  150 (274)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSB-----
T ss_pred             HHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccc-----
Confidence            99999999999999876553322    233344555555555555566665555432  2234555555443332     


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                           .+....|+++|+++++++|+++.|+  .|||||+|+||+++|+
T Consensus       151 -------------------------------------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~  193 (274)
T d2pd4a1         151 -------------------------------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTL  193 (274)
T ss_dssp             -------------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred             -------------------------------------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCc
Confidence                                                 2667889999999999999999999  5899999999999999


Q ss_pred             CcCCCCCC---ChhhhhccceeecccCCCCCcceEeccCcccCC
Q 023896          235 INFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       235 ~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      +.......   ........++++..+|++++....||.++.++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         194 ASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             TGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             cccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence            87543110   011112345566666666666666766666554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.98  E-value=1.9e-32  Score=233.45  Aligned_cols=224  Identities=20%  Similarity=0.215  Sum_probs=162.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-HHHHHHHHHhcCCCCCceeEEEeccc----ChHHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDIS----DLASVSSLADFIK   81 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~Dl~----~~~~v~~~~~~~~   81 (275)
                      +++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.......  ....++|+.    .++.+.++++++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS--AVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC--EEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCc--eEEEecccccchhHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998664 566777777654432  556665554    4566778888899


Q ss_pred             hhcCCccEEEcCCcccccchhh-----------ccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-----CCCeEEEEec
Q 023896           82 TQFGKLDILTKGDAEVDWSKVC-----------YQTYELAVECLKTNYYGTKQTCEALIPLLELS-----DSPRLVNLSS  145 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~-----------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~vsS  145 (275)
                      ++||+||++|||||+....+..           ....+.+...+..|+.+.+...+...+.+...     ..+.+++++|
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            9999999999999986544321           22345677889999999999998888776543     2357788888


Q ss_pred             CccccCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEE
Q 023896          146 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCV  223 (275)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~v  223 (275)
                      ..+..+.                                          ++...|++||++++.++|.++.++  .||||
T Consensus       160 ~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrV  197 (266)
T d1mxha_         160 AMTDLPL------------------------------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRV  197 (266)
T ss_dssp             GGGGSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             ccccccC------------------------------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEE
Confidence            7665443                                          788999999999999999999998  58999


Q ss_pred             EeecCCeeecCCcCCCCCCChhhhhcccee-ecccCCCCCcceEeccCcccCC
Q 023896          224 NCVCPGFVKTDINFHAGILSVEEGAESPVK-LALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       224 n~v~pG~v~T~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      |+|+||+++|++..... ...+-..+.++. +..+|++.+....||.++.++|
T Consensus       198 N~I~PG~i~t~~~~~~~-~~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~  249 (266)
T d1mxha_         198 NAVAPGLSLLPPAMPQE-TQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGY  249 (266)
T ss_dssp             EEEEESSBSCCSSSCHH-HHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             EEeccCcEeccccCCHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence            99999999998753210 000001122332 2244555555555555555544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=8e-33  Score=232.45  Aligned_cols=206  Identities=19%  Similarity=0.118  Sum_probs=159.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|++|||||++|||+++|++|+++|++|++++|+.+.               ......++|+++...+..+.....+.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQEEAP   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhhcccc
Confidence            5899999999999999999999999999999998642               1266788999999999999888777665


Q ss_pred             CccEEEcCCcc---cccchhhccchhHHHHhHHhhcccHHHHHHHHhhh------hhcCCCCeEEEEecCccccCCCcHH
Q 023896           86 KLDILTKGDAE---VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL------LELSDSPRLVNLSSYVSALKDLPEK  156 (275)
Q Consensus        86 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~g~iv~vsS~~~~~~~~~~~  156 (275)
                      ..+.+.++...   .........+.+.|++.+++|+.+++.+++.+.+.      |.+++.|+|||+||..+..+.    
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~----  141 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ----  141 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC----
Confidence            54444443321   11233335677899999999999999999999988      444567899999998887665    


Q ss_pred             HHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecC
Q 023896          157 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTD  234 (275)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~  234 (275)
                                                            ++...|+++|+|+++|+|+++.|+  .|||||+|+||+|+|+
T Consensus       142 --------------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~  183 (241)
T d1uaya_         142 --------------------------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP  183 (241)
T ss_dssp             --------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred             --------------------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence                                                  778999999999999999999998  5899999999999999


Q ss_pred             CcCCCC----------------CCChhhhhccceeecccCCCCCcceEeccC
Q 023896          235 INFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  270 (275)
Q Consensus       235 ~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  270 (275)
                      +.....                .-+|+|.++.+++++..  .-.+|+.+..+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~VD  233 (241)
T d1uaya_         184 LLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLD  233 (241)
T ss_dssp             HHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             ccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEEC
Confidence            764321                22566666666655542  23455554443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.97  E-value=5.2e-32  Score=231.13  Aligned_cols=223  Identities=17%  Similarity=0.160  Sum_probs=167.4

Q ss_pred             ccCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa--~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+..+..+..   .+..+.  ....+++|+++++++.++++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~---~~~~~~--~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI---TDRLPA--KAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHH---HTTSSS--CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHH---HHHcCC--ceeeEeeecccccccccccchh
Confidence            478999999995  579999999999999999999999987654322   222221  2678899999999999999888


Q ss_pred             Hhhc---CCccEEEcCCcccccc-----hhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCC
Q 023896           81 KTQF---GKLDILTKGDAEVDWS-----KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD  152 (275)
Q Consensus        81 ~~~~---g~id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~  152 (275)
                      .+.+   ++||+++||+|..+..     ++.+.+.+.|...+.+|..+.+...+...+.+..   +.+++++|.....+.
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~  154 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAM  154 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCC
T ss_pred             hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccC
Confidence            7765   6799999999875432     3446778899999999999999999999887632   344555554444332


Q ss_pred             CcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCe
Q 023896          153 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGF  230 (275)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~  230 (275)
                                                                +....|+++|+++.+++|+++.++  .+||||+|+||+
T Consensus       155 ------------------------------------------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~  192 (268)
T d2h7ma1         155 ------------------------------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGP  192 (268)
T ss_dssp             ------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             ------------------------------------------cccchhhccccchhhccccchhhhhccCCcceEEecCC
Confidence                                                      678899999999999999999999  589999999999


Q ss_pred             eecCCcCCCC--CCChh----------h-hhccceee-cccCCCCCcceEeccCcccCC
Q 023896          231 VKTDINFHAG--ILSVE----------E-GAESPVKL-ALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       231 v~T~~~~~~~--~~~~~----------~-~a~~~~~~-~~~~~~~~~~~~~~~~~~a~~  275 (275)
                      |+|++.....  .....          . ..+.|+.+ +.+|++.++...||.++.++|
T Consensus       193 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~  251 (268)
T d2h7ma1         193 IRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPA  251 (268)
T ss_dssp             CCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTT
T ss_pred             CCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            9998753210  00000          0 01234433 666777777777777776665

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=5.2e-30  Score=217.81  Aligned_cols=202  Identities=21%  Similarity=0.174  Sum_probs=163.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh---HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++...+.   ++.+++||+++.++++++++++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~---~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA---RTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccc---cccccccccchHHHHHHhhccc
Confidence            367999999999999999999999999 6889998753   45566666665543   3899999999999999999987


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                      .+. +++|.++||+|.....++.+.+.++|+..+++|+.+++++.+.+.+    .+.++||++||+.+..+.        
T Consensus        85 ~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~~~~iv~~SS~a~~~g~--------  151 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGA--------  151 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCC--------
T ss_pred             ccc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----cCCceEeeecchhhccCC--------
Confidence            654 6899999999998888888999999999999999999999886544    456899999999888765        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC-CcCC-
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD-INFH-  238 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~-~~~~-  238 (275)
                                                        ++...|+++|++++.|++.++.+  |+++++|+||++.++ |... 
T Consensus       152 ----------------------------------~~~~~YaAaka~l~~la~~~~~~--Gi~v~~I~pg~~~~~g~~~~~  195 (259)
T d2fr1a1         152 ----------------------------------PGLGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGSGMAEGP  195 (259)
T ss_dssp             ----------------------------------TTCTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC--------
T ss_pred             ----------------------------------cccHHHHHHHHhHHHHHHHHHhC--CCCEEECCCCcccCCccccch
Confidence                                              77889999999999999888764  899999999988543 3211 


Q ss_pred             ---------CCCCChhhhhccceeecccC
Q 023896          239 ---------AGILSVEEGAESPVKLALLP  258 (275)
Q Consensus       239 ---------~~~~~~~~~a~~~~~~~~~~  258 (275)
                               ...++++++++.+...+...
T Consensus       196 ~~~~~~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         196 VADRFRRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             ----CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence                     12467888777666555433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=3.9e-29  Score=211.77  Aligned_cols=227  Identities=19%  Similarity=0.176  Sum_probs=155.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc-C
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-G   85 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g   85 (275)
                      |+||||||++|||+++|++|+++|++|++++|+..+                    ..+|+.++........++.... +
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999987531                    3568999988888766665554 5


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      .+|+++||||...       ..+.+.....+|..+...+.+...+.+.+.....+.++++.....-......        
T Consensus        62 ~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  126 (257)
T d1fjha_          62 GMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNP--------  126 (257)
T ss_dssp             CCSEEEECCCCCT-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCT--------
T ss_pred             CCcEEEEcCCCCC-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhh--------
Confidence            7999999998654       3356788899999999999999999998877778888877544321100000        


Q ss_pred             chhHHHHHHHHHH-hhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--CCeEEEeecCCeeecCCcCCCCC-
Q 023896          166 NLTEERIEMVVKD-YFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGI-  241 (275)
Q Consensus       166 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--~~i~vn~v~pG~v~T~~~~~~~~-  241 (275)
                      ......   .... ...+    -....+.+++..+|++||+|+++|+|+++.|+  .|||||+|+||+|+|++...... 
T Consensus       127 ~~~~~~---~g~~~~i~s----~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  199 (257)
T d1fjha_         127 LALALE---AGEEAKARA----IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD  199 (257)
T ss_dssp             THHHHH---HTCHHHHHH----HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------
T ss_pred             hhhhcc---CCcEEEEee----ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC
Confidence            000000   0000 0000    00111222345679999999999999999999  68999999999999998754311 


Q ss_pred             -CChhhhh--ccceeecccCCCCCcceEeccCcccCC
Q 023896          242 -LSVEEGA--ESPVKLALLPDGGPTGRFFLRKEEAPF  275 (275)
Q Consensus       242 -~~~~~~a--~~~~~~~~~~~~~~~~~~~~~~~~a~~  275 (275)
                       ...+...  ..|++++.+|++++....||.++.++|
T Consensus       200 ~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~  236 (257)
T d1fjha_         200 PRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASY  236 (257)
T ss_dssp             ---------CCCSTTSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence             1111112  247888999999999999999998876

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=8.3e-20  Score=161.09  Aligned_cols=184  Identities=17%  Similarity=0.018  Sum_probs=131.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .|+||||||+|.||++++++|+++|++|++++|....     .+....+..   ....++.++++|++|.++++++++..
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH---TCNPKFHLHYGDLSDTSNLTRILREV   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhh---hcCCCeEEEEeecCCHHHHHHHHhcc
Confidence            4899999999999999999999999999999985432     222222111   11223889999999999999998866


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           .+|+++|.|+.....    ...++..+.+++|+.|+.++++++...-. .+..++|++||..-. +.        
T Consensus        78 -----~~d~v~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vY-G~--------  138 (357)
T d1db3a_          78 -----QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELY-GL--------  138 (357)
T ss_dssp             -----CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGG-TT--------
T ss_pred             -----CCCEEEEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhh-CC--------
Confidence                 789999999875432    23456677899999999999998865322 233589999995422 11        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                            .....+.|..+..+...|+.||.+.+.+++.+++.+ ++.+..+.|+.|..|
T Consensus       139 ----------------------~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~vyGp  189 (357)
T d1db3a_         139 ----------------------VQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-GMYACNGILFNHESP  189 (357)
T ss_dssp             ----------------------CCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECT
T ss_pred             ----------------------CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCEEEEEeccccCC
Confidence                                  011124455555567899999999999999998875 577777887777665

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.78  E-value=2.8e-20  Score=150.27  Aligned_cols=116  Identities=16%  Similarity=0.030  Sum_probs=96.7

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++||++|||||++|||+++++.|+++|++|++++|+.++++...+++.....    +....+|+++.+++++++    
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----VNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT----CCCEEEECCSHHHHHHHT----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc----hhhhhhhcccHHHHHHHh----
Confidence            368999999999999999999999999999999999999999988888775422    556889999998876654    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  132 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  132 (275)
                         +++|+||||||...    ...+.+.|+..+++|+.+.++....+.+.+
T Consensus        91 ---~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1          91 ---KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             ---TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             ---cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence               58999999998642    245889999999999999988665554433

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=6.3e-18  Score=147.64  Aligned_cols=180  Identities=18%  Similarity=0.101  Sum_probs=132.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH---HHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG---LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++|||||+|.||+.++++|+++|++|++++|.....   ....+.....     .+.++++|++|.+.+.++++..    
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~Dl~d~~~l~~~~~~~----   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK-----HPTFVEGDIRNEALMTEILHDH----   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS-----CCEEEECCTTCHHHHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCC-----CCEEEEeecCCHHHHHHHHhcc----
Confidence            599999999999999999999999999998633221   1222222221     2888999999999988888754    


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ++|+|+|.|+.....    .+.++..+.+++|+.|+.++++++...    +-.++|++||.....+.....        
T Consensus        73 -~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~--------  135 (338)
T d1udca_          73 -AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIP--------  135 (338)
T ss_dssp             -TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSS--------
T ss_pred             -CCCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccc--------
Confidence             689999999864321    244556788999999999999988653    345899999866543321000        


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                            ...+.....+...|+.+|.+.+.+++....++.++.+..+.|+.+..+.
T Consensus       136 ----------------------~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         136 ----------------------YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             ----------------------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             ----------------------cccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEecc
Confidence                                  0001122245788999999999999998888888999999999888764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=1.4e-17  Score=145.88  Aligned_cols=183  Identities=16%  Similarity=0.076  Sum_probs=130.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-HH--HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GL--EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-~~--~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .|+||||||+|.||++++++|+++|++|+++++.... ..  .....+...     .+.++.+|++|.++++++++..  
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~-----~v~~~~~Dl~d~~~l~~~~~~~--   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH-----HIPFYEVDLCDRKGLEKVFKEY--   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS-----CCCEEECCTTCHHHHHHHHHHS--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhccc-----CCeEEEeecCCHHHHHHHHhcc--
Confidence            3789999999999999999999999999998763321 11  111222221     2788999999999988887644  


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG  162 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  162 (275)
                         ++|+|+|.|+......    ..+.....+.+|+.++.++++++...    +..++|++||........         
T Consensus        74 ---~~d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~---------  133 (347)
T d1z45a2          74 ---KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDAT---------  133 (347)
T ss_dssp             ---CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGG---------
T ss_pred             ---CCCEEEEccccccccc----cccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcc---------
Confidence               7999999998654321    23445677889999999999998542    335899999966443210         


Q ss_pred             cccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeec
Q 023896          163 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKT  233 (275)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T  233 (275)
                                        +....+.+.+..+..+...|+.+|.+.+.+++.+.... .++.+..+.|+.+..
T Consensus       134 ------------------~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         134 ------------------RFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             ------------------GSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             ------------------cCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEe
Confidence                              00111223344444567789999999999999998765 577777777766654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.74  E-value=8e-18  Score=147.25  Aligned_cols=202  Identities=20%  Similarity=0.149  Sum_probs=135.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .||+||||||+|.||++++++|+++|++|+.+.|+..+............ .......+..|+++.+++..++.      
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc-cccccEEEeccccchhhhhhhcc------
Confidence            58999999999999999999999999999999999887665544322221 12225557789999987665543      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       .+|+++|+++.....       ......+.+|+.|+.++++++...   ....++|++||..+.....+........ .
T Consensus        83 -~~~~v~~~a~~~~~~-------~~~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~-e  150 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD-E  150 (342)
T ss_dssp             -TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC-T
T ss_pred             -cchhhhhhccccccc-------ccccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcccc-c
Confidence             689999998865431       234466788999999999987552   2346999999976543322111111111 1


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC-CCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~-~~i~vn~v~pG~v~T~~  235 (275)
                      .+...+....          ...+.+..+..+...|+.+|.+.+.++..++..+ .++++.+++|+.+..|.
T Consensus       151 ~~~~~~~~~~----------~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         151 KSWNLESIDK----------AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             TCCCHHHHHH----------HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCC
T ss_pred             cccccccccc----------cccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCC
Confidence            1101010000          0012222333446789999999999999888876 68888899999887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-17  Score=142.73  Aligned_cols=184  Identities=15%  Similarity=0.013  Sum_probs=127.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH-----HHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++|||||+|.||++++++|+++||+|+.++|....     .+..........  ...+.++.+|+++.+.+.++++.. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI--EGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhc--cCCcEEEEeecCCchhhHHHHhhc-
Confidence            445999999999999999999999999999985431     111111111111  123889999999999999988766 


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                          .+++++|.++.....    ...+.....+++|+.|+.++++++...-. .+..++|++||.+-. +.         
T Consensus        79 ----~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vy-g~---------  139 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELY-GK---------  139 (347)
T ss_dssp             ----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGT-CS---------
T ss_pred             ----ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchhee-cC---------
Confidence                678888887654332    23445566789999999999998866432 223589999985432 21         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                           .....+.|..++.+...|+.||.+.+.+++.++..+ ++.+..+.|+.+..|
T Consensus       140 ---------------------~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~-~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         140 ---------------------VQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNHESP  190 (347)
T ss_dssp             ---------------------CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECT
T ss_pred             ---------------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCC
Confidence                                 011124445555667889999999999999987775 666666777666554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=2.5e-16  Score=139.94  Aligned_cols=199  Identities=16%  Similarity=0.039  Sum_probs=130.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH----------------HHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR----------------GLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~----------------~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      |++||||||+|.||.+++++|+++|++|+++|.-..+                .............  .++.++++|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--CCcEEEEccCCC
Confidence            6899999999999999999999999999998732211                1111111111111  128899999999


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      .+.++++++..     ++|+|+|.|+.... +......+...+.+++|+.|+.++++++...   ....++++.||....
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGG
T ss_pred             HHHHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHh---ccccceeeccccccc
Confidence            99999998866     79999999986432 2223455677888999999999999988653   223456666664433


Q ss_pred             cCCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchh-hhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecC
Q 023896          150 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCP  228 (275)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~p  228 (275)
                      .....+. .+...                  .....+ ...+..+..+...|+.+|.+.+.+++.++.++ ++.+.++.|
T Consensus       150 ~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-~l~~~~lR~  209 (393)
T d1i24a_         150 GTPNIDI-EEGYI------------------TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQ  209 (393)
T ss_dssp             CCCSSCB-CSSEE------------------EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             ccccccc-ccccc------------------cccccccccccccccccccHHHHHhhhhccccccccccc-ceeeeeccc
Confidence            2110000 00000                  000000 00111233456789999999999999888774 788888888


Q ss_pred             CeeecCC
Q 023896          229 GFVKTDI  235 (275)
Q Consensus       229 G~v~T~~  235 (275)
                      +.+..+.
T Consensus       210 ~~v~G~~  216 (393)
T d1i24a_         210 GVVYGVK  216 (393)
T ss_dssp             CEEECSC
T ss_pred             ccccCCC
Confidence            8877653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=7.9e-17  Score=140.02  Aligned_cols=186  Identities=18%  Similarity=0.067  Sum_probs=131.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-----HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .|++|||||+|.||++++++|+++||+|+.++|...     +...........  +...+.++.+|+++.+++.+.++..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc--cccceEEEEccccCHHHHHHHHhhh
Confidence            489999999999999999999999999999998432     222221111111  1223788899999999998888755


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEecCccccCCCcHHHHh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEKARA  159 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~  159 (275)
                           ++|+++|.|+.....    ...+.....+.+|+.++..+++++.....+. ...++++.||.......       
T Consensus        79 -----~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-------  142 (339)
T d1n7ha_          79 -----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-------  142 (339)
T ss_dssp             -----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-------
T ss_pred             -----ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-------
Confidence                 799999999865432    2345667888999999999998886544332 23355666554322111       


Q ss_pred             hhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          160 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                               ...+.|..+..+...|+.+|.+.+.++..++..+ ++.+..+.|+.|..|.
T Consensus       143 -------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         143 -------------------------PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPR  192 (339)
T ss_dssp             -------------------------CSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTT
T ss_pred             -------------------------CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh-CCCEEEEEEccccCCC
Confidence                                     1123444555678899999999999999988775 6888888888887664

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=3.4e-16  Score=135.03  Aligned_cols=181  Identities=15%  Similarity=0.060  Sum_probs=127.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |+||||||+|.||++++++|+++|++|+.++|.......  ..+..... ..++.++.+|++|..++.+.+...     .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~   72 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGI-EGDIQYEDGDMADACSVQRAVIKA-----Q   72 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHhcc-cCCcEEEEccccChHHhhhhhccc-----c
Confidence            789999999999999999999999999999986543111  12222211 123889999999999988888765     6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      .+++++.++.....    ...+...+.+..|+.|+.++++++...   ....++++.||.. ..+..             
T Consensus        73 ~~~~~~~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~-~~~~~-------------  131 (321)
T d1rpna_          73 PQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSE-MFGLI-------------  131 (321)
T ss_dssp             CSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGG-GGCSC-------------
T ss_pred             cccccccccccccc----ccccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchh-hcCcc-------------
Confidence            77888887654432    233456788999999999999987552   2234666666643 33221             


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                       ......|..+..+...|+.+|.+.+.+++.++..+ ++.+..+.|+.+..|
T Consensus       132 -----------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lr~~~vyGp  181 (321)
T d1rpna_         132 -----------------QAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGILFNHESP  181 (321)
T ss_dssp             -----------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECT
T ss_pred             -----------------cCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc-CCcEEEEEEecccCC
Confidence                             11123344555667899999999999999998775 566666677666554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=5.8e-16  Score=134.99  Aligned_cols=182  Identities=17%  Similarity=0.040  Sum_probs=128.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh----HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +-|++|||||+|.||++++++|.++|++|+.++|...    ..... ..+... .....+.++.+|+.|.........  
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~d~~d~~~~~~~~~--   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSE-KQWSNFKFIQGDIRNLDDCNNACA--   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCH-HHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HHhhhh-cccCCeeEEeeccccccccccccc--
Confidence            4589999999999999999999999999999986322    11122 111110 001128889999998886554432  


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           ..+.++|.++.....    .+.++....+++|+.|+.++++++..    .+..++|++||.......        
T Consensus        91 -----~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~--------  149 (341)
T d1sb8a_          91 -----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDH--------  149 (341)
T ss_dssp             -----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTC--------
T ss_pred             -----ccccccccccccccc----ccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCC--------
Confidence                 678888877644322    24567788899999999999998854    344699999996643211        


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                             ....+.|..+..+...|+.+|.+.+.+++.+++.+ ++++..+.|+.|..+.
T Consensus       150 -----------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         150 -----------------------PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             -----------------------CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTT
T ss_pred             -----------------------CCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh-CCCeEEEEeceeeccC
Confidence                                   11224455555667899999999999999998775 6777778888776553

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.67  E-value=2.1e-16  Score=139.20  Aligned_cols=193  Identities=17%  Similarity=0.102  Sum_probs=130.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEE-EecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +||||||+|.||++++++|++.|+++++ +++......  .+.+.... ....+.++.+|+++...+.++++..     +
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDIS-ESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            5899999999999999999999997555 443221110  01122111 1234889999999999999888755     7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-----CCCeEEEEecCccccCCCcHHHHhhh
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----DSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                      +|+|+|.|+.....    .+.++..+.+++|+.|+.++++.+...-...     +..++|++||.............+  
T Consensus        74 ~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~--  147 (361)
T d1kewa_          74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE--  147 (361)
T ss_dssp             CSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC--
T ss_pred             CCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc--
Confidence            99999999864321    2344556789999999999999987754321     235899999966442211000000  


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchh-hhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                          ..... ...+..+..+...|+.||.+.+.+++.++..+ ++.+.++.|+.|..|.
T Consensus       148 --------------------~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-~i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         148 --------------------NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             --------------------TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTT
T ss_pred             --------------------cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEecCceECcC
Confidence                                00000 01122333456789999999999999998876 7888888888887764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=9.7e-16  Score=133.71  Aligned_cols=183  Identities=17%  Similarity=0.061  Sum_probs=128.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEec------ChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTAR------DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      |+||||||+|.||++++++|+++|++|+.++|      .........+.+.....  .++.++.+|++|.+.+.+++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC--CCcEEEEeecccccccccccccc
Confidence            78899999999999999999999999999864      11111112222221111  23889999999999988877643


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhh
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV  160 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  160 (275)
                           .+++++|.|+.....    ...+...+.+++|+.++.++++++..    .+-.+++++||...........    
T Consensus        81 -----~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~----  143 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLP----  143 (346)
T ss_dssp             -----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSS----
T ss_pred             -----ccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccc----
Confidence                 788999999865432    23344567899999999999988743    4445899998865443321000    


Q ss_pred             hccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          161 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                                .............|+.+|...+...+.++....+.....+.|+.+..+
T Consensus       144 --------------------------~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         144 --------------------------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             --------------------------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECC
T ss_pred             --------------------------ccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceecc
Confidence                                      001111124456899999999999999888777788888888777664

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=6.9e-16  Score=132.78  Aligned_cols=169  Identities=17%  Similarity=0.153  Sum_probs=122.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|+||||||+|.||++++++|+++|+.++++++..                       .+|+.+.+.+..+++.-     
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~-----   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhc-----
Confidence            57899999999999999999999999988765321                       15889999888877643     


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      .+|.++|+|+......   .......+.+++|+.++.++++++..    .+-.++|++||.+...+..+...        
T Consensus        54 ~~d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~--------  118 (315)
T d1e6ua_          54 RIDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPM--------  118 (315)
T ss_dssp             CCSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSB--------
T ss_pred             CCCEEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCc--------
Confidence            7899999987654322   23445566788999999999998754    34458999999775533211000        


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCc
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  236 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~  236 (275)
                                        .+....+..+.++...|+.+|.+.+.+++.+.++. ++++..+.|+.|..|..
T Consensus       119 ------------------~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         119 ------------------AESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             ------------------CGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTC
T ss_pred             ------------------cCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCC
Confidence                              00011111222335679999999999999998875 88999999999987643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.64  E-value=1.9e-15  Score=131.95  Aligned_cols=186  Identities=19%  Similarity=0.028  Sum_probs=132.1

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+||+||||||+|.||++++++|+++|++|+.++|+..+.....+....    ...+..+.+|++|.+.+.++++..   
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~----~~~i~~~~~Dl~d~~~l~~~~~~~---   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQNKLLESIREF---   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc----ccCCeEEEeeccChHhhhhhhhhc---
Confidence            3789999999999999999999999999999999987654443332211    123889999999999988888766   


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                        .+|+++|.|+.....    .+.+.....+++|+.++.++++++...   .....+++.||....... ..        
T Consensus        79 --~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~-~~--------  140 (356)
T d1rkxa_          79 --QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNK-EW--------  140 (356)
T ss_dssp             --CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCC-CS--------
T ss_pred             --hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc---cccccccccccccccccc-cc--------
Confidence              789999998764332    234566778999999999999988653   223345555543332211 00        


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC--------CCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--------PKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~--------~~i~vn~v~pG~v~T~~  235 (275)
                                           .....+..+..+...|+.+|...+.+++.++.++        .++.+..+.|+.+..+.
T Consensus       141 ---------------------~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         141 ---------------------IWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             ---------------------SSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ---------------------ccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence                                 0011222333456789999999999999888764        35778888888776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=2.8e-15  Score=131.60  Aligned_cols=183  Identities=12%  Similarity=-0.015  Sum_probs=128.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++++||||||+|.||++++++|+++|++|+++++.....         .........+..+|+.+.+.+.++++      
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH---------MTEDMFCDEFHLVDLRVMENCLKVTE------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS---------SCGGGTCSEEEECCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc---------hhhhcccCcEEEeechhHHHHHHHhh------
Confidence            578899999999999999999999999999998654320         00011125677789988887655543      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       .+|.++|.|+......   ...+.....+.+|+.++.++++++..    .+..++|++||.........          
T Consensus        79 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~----------  140 (363)
T d2c5aa1          79 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQ----------  140 (363)
T ss_dssp             -TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGS----------
T ss_pred             -cCCeEeeccccccccc---ccccccccccccccchhhHHHHhHHh----hCcccccccccccccccccc----------
Confidence             7899999987654432   24556778899999999999998755    34469999999654422100          


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                    ...........+..+..+...|+.+|.+.+.+++.+..++ ++.+..+.|+.+..+.
T Consensus       141 --------------~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         141 --------------LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             --------------SSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTT
T ss_pred             --------------ccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEeccC
Confidence                          0000000011222333456789999999999999988775 7888888888887653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8e-15  Score=118.83  Aligned_cols=181  Identities=14%  Similarity=0.081  Sum_probs=122.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ..|+++||||||+||++++++|+++|++|++..|++.++..       ..  ...+.++.+|+++.+++.++++      
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~--~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EG--PRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SS--CCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------cc--ccccccccccccchhhHHHHhc------
Confidence            46789999999999999999999999999999999876321       11  1237889999999998777665      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV  164 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  164 (275)
                       ..|++|+++|.....     +..      +++..++.+++++    +++++-.++|++||.......            
T Consensus        67 -~~d~vi~~~g~~~~~-----~~~------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~------------  118 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDL-----SPT------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDP------------  118 (205)
T ss_dssp             -TCSEEEECCCCTTCC-----SCC------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCT------------
T ss_pred             -CCCEEEEEeccCCch-----hhh------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCC------------
Confidence             689999998864321     111      2233445555554    445566799999985433211            


Q ss_pred             cchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcC-------
Q 023896          165 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINF-------  237 (275)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~-------  237 (275)
                                                ...++....|...|...+.+.+.     .+++...|.||.+......       
T Consensus       119 --------------------------~~~~~~~~~~~~~~~~~e~~l~~-----~~~~~tiirp~~~~~~~~~~~~~~~~  167 (205)
T d1hdoa_         119 --------------------------TKVPPRLQAVTDDHIRMHKVLRE-----SGLKYVAVMPPHIGDQPLTGAYTVTL  167 (205)
T ss_dssp             --------------------------TCSCGGGHHHHHHHHHHHHHHHH-----TCSEEEEECCSEEECCCCCSCCEEES
T ss_pred             --------------------------ccccccccccchHHHHHHHHHHh-----cCCceEEEecceecCCCCcccEEEee
Confidence                                      01112334566677766655432     5888899999988533211       


Q ss_pred             ----CCCCCChhhhhccceeecccCC
Q 023896          238 ----HAGILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       238 ----~~~~~~~~~~a~~~~~~~~~~~  259 (275)
                          .....+.++.|+.++..+..++
T Consensus       168 ~~~~~~~~i~~~DvA~~~~~~l~~~~  193 (205)
T d1hdoa_         168 DGRGPSRVISKHDLGHFMLRCLTTDE  193 (205)
T ss_dssp             SSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             CCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence                1123577888888887776655

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.7e-17  Score=139.61  Aligned_cols=178  Identities=13%  Similarity=0.011  Sum_probs=117.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .|+||||||+|.||++++++|+++|++|+.++|........   +...      .....+|+.+.+.++.       .+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~------~~~~~~d~~~~~~~~~-------~~~   64 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHW------IGHENFELINHDVVEP-------LYI   64 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGG------TTCTTEEEEECCTTSC-------CCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHh------cCCCceEEEehHHHHH-------HHc
Confidence            47899999999999999999999999999998633211111   1111      1112234444333222       223


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      ++|+|+|.|+......    ..++..+.+++|+.++.++++++..    .+ .++|++||.+.......          .
T Consensus        65 ~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~----------~  125 (312)
T d2b69a1          65 EVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEV----------H  125 (312)
T ss_dssp             CCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSS----------S
T ss_pred             CCCEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCC----------C
Confidence            7999999998654321    2345567889999999999998754    23 48999999554321100          0


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      +                ..+....+..+..+...|+.+|.+.+.+++.++..+ ++.+.++.|+.|..|.
T Consensus       126 ~----------------~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         126 P----------------QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVARIFNTFGPR  178 (312)
T ss_dssp             S----------------BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTT
T ss_pred             C----------------CCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-CCcEEEEEeeeEECCC
Confidence            0                000112222333457889999999999999998885 8888889999888764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.62  E-value=9.3e-16  Score=133.99  Aligned_cols=191  Identities=20%  Similarity=0.121  Sum_probs=125.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |.||||||+|.||++++++|+++|+.|.+++++...-......+....  ..++.++.+|++|.+.+..+++       .
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh--cCCeEEEEccCCCHHHHHHHHh-------h
Confidence            679999999999999999999999876665543210000000111111  1238899999999998877764       6


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      .|.++|.|+......    ..++..+.+++|+.|+.++++++...    + .++|++||.... +..+.....       
T Consensus        74 ~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~----~-~k~i~~ss~~vy-g~~~~~~~~-------  136 (346)
T d1oc2a_          74 ADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVY-GDLPLREDL-------  136 (346)
T ss_dssp             CSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGG-CCBCCGGGS-------
T ss_pred             hhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhccc----c-ccccccccceEe-cccCccccc-------
Confidence            788888887654432    23445678899999999999887553    2 477888775533 211100000       


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                 ..........+.+.....+...|+.+|.+.+.+++.+++++ ++++.++.|+.|..|.
T Consensus       137 -----------~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         137 -----------PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPY  193 (346)
T ss_dssp             -----------TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTT
T ss_pred             -----------cccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeecceeCCC
Confidence                       00000111123334444567889999999999999988775 8899999998887753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.61  E-value=1.3e-14  Score=128.24  Aligned_cols=193  Identities=16%  Similarity=0.073  Sum_probs=132.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHH-CCCEEEEEec---------ChhHHHHHHHHHHhc-----CCCCCceeEEEecccCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLAS-KGITVVLTAR---------DEKRGLEAVEKLKAS-----GVDPELLLFHQLDISDL   70 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~-~g~~vi~~~r---------~~~~~~~~~~~l~~~-----~~~~~~~~~~~~Dl~~~   70 (275)
                      +.+||||||+|.||+.++++|++ .|++|+++++         ..+..+.....+...     .....++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6899999874         222233333333321     11123477889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCcccc
Q 023896           71 ASVSSLADFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL  150 (275)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~  150 (275)
                      +.++++++..    .++|+|+|.|+......    ..+.....+++|+.++.++++++..    .+..+++++||.....
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~  149 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFG  149 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTB
T ss_pred             HHhhhhhhcc----ceeehhhcccccccccc----cccccccccccccccccccchhhhc----cCCccccccccccccc
Confidence            9987777643    57999999998755432    3345667889999999999998864    3445788777755443


Q ss_pred             CCCcHHHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCe
Q 023896          151 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGF  230 (275)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~  230 (275)
                      .......                        ......+.+.....+...|+.+|.+.+.+++.+...+ ++.+.++.|+.
T Consensus       150 ~~~~~~~------------------------~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gl~~~~lR~~~  204 (383)
T d1gy8a_         150 NPTMGSV------------------------STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFN  204 (383)
T ss_dssp             SCCC-----------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECE
T ss_pred             ccccccc------------------------cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh-CCCEEEEecce
Confidence            2211000                        0001113333444567899999999999999988774 78888888888


Q ss_pred             eecCC
Q 023896          231 VKTDI  235 (275)
Q Consensus       231 v~T~~  235 (275)
                      +..+.
T Consensus       205 vyG~~  209 (383)
T d1gy8a_         205 ACGAH  209 (383)
T ss_dssp             EECCC
T ss_pred             eeccC
Confidence            87654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.60  E-value=2.1e-14  Score=123.96  Aligned_cols=180  Identities=17%  Similarity=0.094  Sum_probs=118.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChh-HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +||||||+|.||++++++|+++|++|+++++-.. ........+... .   ++.++.+|+++.+++.++++..     +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~-~---~~~~i~~Di~~~~~l~~~~~~~-----~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-G---NFEFVHGDIRNKNDVTRLITKY-----M   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-C---CCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc-C---CcEEEEcccCCHHHHHHHHHhc-----C
Confidence            5899999999999999999999999999875322 222223333322 1   2888999999999999888766     7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+++|.|+.....    ...++..+.+++|+.|+.++++++...    +..+.++.||.....+.......  ....  
T Consensus        73 ~d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~--~~~~--  140 (338)
T d1orra_          73 PDSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKY--NETE--  140 (338)
T ss_dssp             CSEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCE--EECS--
T ss_pred             CceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccc--cccc--
Confidence            89999999875442    234456788999999999999987653    33455555554443332100000  0000  


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  218 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~  218 (275)
                                ........+....+.....+...|+.+|...+.+.......+
T Consensus       141 ----------~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~  182 (338)
T d1orra_         141 ----------TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF  182 (338)
T ss_dssp             ----------SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------ccccccccccCcccCCccccccccccccchhhhhhhhhhhcc
Confidence                      000000111112223334567899999999999999888876

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.57  E-value=1.3e-14  Score=125.40  Aligned_cols=178  Identities=21%  Similarity=0.117  Sum_probs=125.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEE------EEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVV------LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi------~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +||||||+|.||++++++|+++|+.|.      ..++.......  ..+... ....++.++.+|+++........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPV-DADPRLRFVHGDIRDAGLLAREL----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGG-TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhh-hcCCCeEEEEeccccchhhhccc----
Confidence            589999999999999999999998543      33322111000  011111 11234889999999988655433    


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                         ...|.++|.|+.....    ...+...+.+++|+.++.++++++..    .+..++|++||.....+.         
T Consensus        75 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~---------  134 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSI---------  134 (322)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCC---------
T ss_pred             ---cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCC---------
Confidence               3789999998764332    24456677889999999999998854    344689999996544221         


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                            ....+.|..+..+...|+.+|.+.+.+++.+++++ ++.+.++.|+.|..|.
T Consensus       135 ----------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         135 ----------------------DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             ----------------------SSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTT
T ss_pred             ----------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEECcC
Confidence                                  12234455556677899999999999999998885 7888889988887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=2.4e-14  Score=124.46  Aligned_cols=179  Identities=11%  Similarity=-0.038  Sum_probs=120.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      +||||||+|.||++++++|+++|+ +|+..++.........        ...++.++.+|+++.+++.+.+.      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------~~~~~~~i~~Di~~~~~~~~~~~------~~   67 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHV------KK   67 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCSHHHHHHH------HH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------cCCCeEEEECccCChHHHHHHHH------hC
Confidence            599999999999999999999995 8998887654322211        11238999999998877655332      15


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+++|+|+......    ..+...+.+.+|+.|+.++++++..    .+ .+.+++||.............        
T Consensus        68 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~----~~-~~~~~~ss~~~~~~~~~~~~~--------  130 (342)
T d2blla1          68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFD--------  130 (342)
T ss_dssp             CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBC--------
T ss_pred             CCccccccccccccc----cccCCcccccccccccccccccccc----cc-ccccccccccccccccccccc--------
Confidence            899999998754421    3344567899999999999999754    22 467777775544322110000        


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                      .......+.....+...|+.+|.+.+.+++.+++.+ ++.+..+.|..+..+
T Consensus       131 ----------------~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~r~~~~~g~  181 (342)
T d2blla1         131 ----------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGP  181 (342)
T ss_dssp             ----------------TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECS
T ss_pred             ----------------cccccccccccCCCcchhhhcccchhhhhhhhhccc-CceeEEeeccccccc
Confidence                            000001111222446789999999999999998885 677777766666554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=9.7e-14  Score=114.47  Aligned_cols=181  Identities=15%  Similarity=0.052  Sum_probs=124.4

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      |++|+||||||||.||++++++|+++|.  +|++.+|++.....         .....+....+|+.+.+++.+.     
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~---------~~~~~i~~~~~D~~~~~~~~~~-----   77 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE---------EAYKNVNQEVVDFEKLDDYASA-----   77 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS---------GGGGGCEEEECCGGGGGGGGGG-----
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc---------cccceeeeeeeccccccccccc-----
Confidence            5789999999999999999999999995  89999997643211         0111266666788876654333     


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhh
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL  161 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  161 (275)
                        +..+|+++|++|....       .....+...+|+.++..+++.+..    .+-.++|++||.....           
T Consensus        78 --~~~~d~vi~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~-----------  133 (232)
T d2bkaa1          78 --FQGHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK-----------  133 (232)
T ss_dssp             --GSSCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT-----------
T ss_pred             --cccccccccccccccc-------ccchhhhhhhcccccceeeecccc----cCccccccCCcccccc-----------
Confidence              3479999999986432       234455678899999999888754    4456899999965432           


Q ss_pred             ccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCCcCCC--
Q 023896          162 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHA--  239 (275)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~~~~~--  239 (275)
                                                       .....|+-+|...+...+.+    .--++..+.||.+..+.....  
T Consensus       134 ---------------------------------~~~~~Y~~~K~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~~~~~  176 (232)
T d2bkaa1         134 ---------------------------------SSNFLYLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESRPG  176 (232)
T ss_dssp             ---------------------------------TCSSHHHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGGGSHH
T ss_pred             ---------------------------------CccchhHHHHHHhhhccccc----cccceEEecCceeecCCCcCcHH
Confidence                                             23457999999988766543    212466789999976532110  


Q ss_pred             ------------------CCCChhhhhccceeecccCC
Q 023896          240 ------------------GILSVEEGAESPVKLALLPD  259 (275)
Q Consensus       240 ------------------~~~~~~~~a~~~~~~~~~~~  259 (275)
                                        ...+.++.|+.++..+..+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         177 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence                              12455677777776665554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.45  E-value=2.3e-13  Score=111.25  Aligned_cols=196  Identities=15%  Similarity=0.047  Sum_probs=124.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCE--EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGIT--VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~--vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++||||||+|+||++++++|+++|+.  |+...|++++....       ..   .+..+.+|+++.+++.++++      
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~---~~~~~~~d~~~~~~~~~~~~------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GG---EADVFIGDITDADSINPAFQ------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TC---CTTEEECCTTSHHHHHHHHT------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cC---CcEEEEeeeccccccccccc------
Confidence            78999999999999999999999975  55567888653321       11   27788999999998777664      


Q ss_pred             CCccEEEcCCcccccchh---------hccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcH
Q 023896           85 GKLDILTKGDAEVDWSKV---------CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE  155 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  155 (275)
                       .+|.++|+++.......         .......+.....+|+.++..++......    ..+...+.|+.....+..+.
T Consensus        68 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~  142 (252)
T d2q46a1          68 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPL  142 (252)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGG
T ss_pred             -cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCCCccc
Confidence             68999999875432111         01122345566788999998888776553    34677887775544322100


Q ss_pred             HHHhhhccccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          156 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                      .                                     ......|...+.....    +..+ .++++..+.||++..+.
T Consensus       143 ~-------------------------------------~~~~~~~~~~~~~~~~----~~~~-~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         143 N-------------------------------------KLGNGNILVWKRKAEQ----YLAD-SGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             G-------------------------------------GGGGCCHHHHHHHHHH----HHHH-SSSCEEEEEECEEECSC
T ss_pred             c-------------------------------------cccccchhhhhhhhhh----hhhc-ccccceeecceEEECCC
Confidence            0                                     0112234444433332    2222 58889999999997664


Q ss_pred             cCC---------------CCCCChhhhhccceeecccCCCCCcceEe
Q 023896          236 NFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFF  267 (275)
Q Consensus       236 ~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  267 (275)
                      ...               .+.++.++.++.++..+..+.  ..++.|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~--~~g~~~  225 (252)
T d2q46a1         181 GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE--AKNKAF  225 (252)
T ss_dssp             TTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG--GTTEEE
T ss_pred             cchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCcc--ccCcEE
Confidence            221               123567788888777665544  344433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.36  E-value=1.2e-12  Score=110.63  Aligned_cols=141  Identities=14%  Similarity=0.050  Sum_probs=101.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +||||||+|.||++++++|.++|+.|. +++...                    .+..|+++.+.++++++..     ++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~--------------------~~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSK--------------------EFCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCS--------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCc--------------------cccCcCCCHHHHHHHHHHc-----CC
Confidence            599999999999999999999887554 443321                    1347999999999888766     78


Q ss_pred             cEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccch
Q 023896           88 DILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENL  167 (275)
Q Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (275)
                      |+|||.||......    ..+.....+.+|+.++..+++++..     ...+++++||.......               
T Consensus        56 D~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~---------------  111 (298)
T d1n2sa_          56 DVIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGT---------------  111 (298)
T ss_dssp             SEEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCC---------------
T ss_pred             CEEEEecccccccc----cccCccccccccccccccchhhhhc-----cccccccccccccccCC---------------
Confidence            99999998654321    3344567789999999999988743     23578888775433221               


Q ss_pred             hHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHH
Q 023896          168 TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  214 (275)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~  214 (275)
                                      ....+.|..++.+...|+.+|.+.+.+.+..
T Consensus       112 ----------------~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         112 ----------------GDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             ----------------TTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence                            1122445555567789999999998777654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.32  E-value=1.5e-11  Score=102.98  Aligned_cols=154  Identities=21%  Similarity=0.214  Sum_probs=109.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      .+||||||||.||++++++|.++|++|+.++|+.                        +|++|.++++++++..     +
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~-----~   52 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEK-----K   52 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHc-----C
Confidence            3599999999999999999999999999998753                        4899999998888765     7


Q ss_pred             ccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhccccc
Q 023896           87 LDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN  166 (275)
Q Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  166 (275)
                      +|+++|+|+......    .....+..+..|+.....+.+.....     ...+++.||.......              
T Consensus        53 ~d~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~--------------  109 (281)
T d1vl0a_          53 PNVVINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGE--------------  109 (281)
T ss_dssp             CSEEEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSC--------------
T ss_pred             CCEEEeecccccccc----ccccchhhcccccccccccccccccc-----cccccccccceeeecc--------------
Confidence            899999988654321    33344566778888888877766542     2366666664332211              


Q ss_pred             hhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          167 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                       ......+...+.+...|+.+|...+.+++..     +.....+.|+++..+
T Consensus       110 -----------------~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~-----~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         110 -----------------AKEPITEFDEVNPQSAYGKTKLEGENFVKAL-----NPKYYIVRTAWLYGD  155 (281)
T ss_dssp             -----------------CSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEESS
T ss_pred             -----------------ccccccccccccchhhhhhhhhHHHHHHHHh-----CCCccccceeEEeCC
Confidence                             1111233444466788999999988777654     445666788877655

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.17  E-value=9.7e-11  Score=94.47  Aligned_cols=150  Identities=11%  Similarity=0.014  Sum_probs=100.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|++|||||||.||++++++|+++|+  +|+...|+...             ....+   ..+..+..++   .   ...
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------------~~~~~---~~~~~d~~~~---~---~~~   59 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRL---DNPVGPLAEL---L---PQL   59 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTE---ECCBSCHHHH---G---GGC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------------hcccc---cccccchhhh---h---hcc
Confidence            48999999999999999999999998  56666665421             11112   2333443322   1   122


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcc
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD  163 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  163 (275)
                      .+.+|.+++++|.....      .....+..++|+.++..+++.+..    .+-.+++++||..+..             
T Consensus        60 ~~~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~-------------  116 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA-------------  116 (212)
T ss_dssp             CSCCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT-------------
T ss_pred             ccchheeeeeeeeeccc------cccccccccchhhhhhhccccccc----cccccccccccccccc-------------
Confidence            35789999998864321      122356788899999999987643    4556899999955432             


Q ss_pred             ccchhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecCC
Q 023896          164 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  235 (275)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~~  235 (275)
                                                     .....|..+|...+...+.+    .--+...+.|+.|..+.
T Consensus       117 -------------------------------~~~~~y~~~K~~~E~~l~~~----~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         117 -------------------------------KSSIFYNRVKGELEQALQEQ----GWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             -------------------------------TCSSHHHHHHHHHHHHHTTS----CCSEEEEEECCSEESTT
T ss_pred             -------------------------------ccccchhHHHHHHhhhcccc----ccccceeeCCcceeCCc
Confidence                                           33567999999888766422    11256778899986653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.16  E-value=1.2e-10  Score=98.57  Aligned_cols=110  Identities=15%  Similarity=0.085  Sum_probs=75.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHH--H--HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG--L--EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~--~--~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++||||||||.||++++++|+++|++|+++.|+....  .  .....+...     .+.++++|+.+.+.+.+.++   
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~-----~v~~v~~d~~d~~~~~~~~~---   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----GAKLIEASLDDHQRLVDALK---   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT-----TCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccC-----CcEEEEeecccchhhhhhcc---
Confidence            45699999999999999999999999999999975422  1  111222222     27888999999988766654   


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                          ..+.++++++....               ..|..+...++.++..    ....++++.||.
T Consensus        75 ----~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a~~----~~~~~~v~~Ss~  116 (312)
T d1qyda_          75 ----QVDVVISALAGGVL---------------SHHILEQLKLVEAIKE----AGNIKRFLPSEF  116 (312)
T ss_dssp             ----TCSEEEECCCCSSS---------------STTTTTHHHHHHHHHH----SCCCSEEECSCC
T ss_pred             ----Ccchhhhhhhhccc---------------ccchhhhhHHHHHHHH----hcCCcEEEEeec
Confidence                67788887754321               2355566666665533    334566767664

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.09  E-value=3e-10  Score=95.31  Aligned_cols=83  Identities=16%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHH--HHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL--EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +.|+||||||||.||++++++|+++|++|++.+|+.....  .....+.......  +.++..|+.+.....+.++    
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVK----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHH----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCC--cEEEEeecccchhhhhhhh----
Confidence            4688999999999999999999999999999999764321  1112222211111  7788899999988777665    


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                         ..+.+++.++.
T Consensus        76 ---~~~~vi~~~~~   86 (307)
T d1qyca_          76 ---NVDVVISTVGS   86 (307)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---hceeeeecccc
Confidence               67888888764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.06  E-value=5.3e-14  Score=112.13  Aligned_cols=47  Identities=17%  Similarity=0.277  Sum_probs=42.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG   54 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~   54 (275)
                      ++.|+||+|+||+++++.|+++|++|++.+|++++++...+++....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            47788888999999999999999999999999999999888887543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.04  E-value=3.3e-09  Score=91.65  Aligned_cols=79  Identities=19%  Similarity=0.134  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.|+|+||||||.||++++++|+++|++|++..|+..+...  +.+....    .+.++++|+.+..++.+   .   .+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~~----~v~~~~gD~~d~~~~~~---~---a~   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIP----NVTLFQGPLLNNVPLMD---T---LF   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTST----TEEEEESCCTTCHHHHH---H---HH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcccC----CCEEEEeeCCCcHHHHH---H---Hh
Confidence            57999999999999999999999999999999998876432  2222221    17889999998665322   1   12


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ...|.++++..
T Consensus        70 ~~~~~~~~~~~   80 (350)
T d1xgka_          70 EGAHLAFINTT   80 (350)
T ss_dssp             TTCSEEEECCC
T ss_pred             cCCceEEeecc
Confidence            46677766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=3.6e-10  Score=95.22  Aligned_cols=169  Identities=18%  Similarity=0.124  Sum_probs=100.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh--hcC
Q 023896            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--QFG   85 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~g   85 (275)
                      ||||||+|.||++++++|+++|+ .|+++++-.... ... .+...         ..+|..+.+.   +.+....  .+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVDL---------NIADYMDKED---FLIQIMAGEEFG   67 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHTS---------CCSEEEEHHH---HHHHHHTTCCCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-ccccc---------chhhhccchH---HHHHHhhhhccc
Confidence            89999999999999999999996 677776322211 111 11111         1123333332   2333322  345


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCcHHHHhhhcccc
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE  165 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  165 (275)
                      .+++++|.|+.....      ........+.|+.++..+++++...    +. ++++.||.....+...           
T Consensus        68 ~~~~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~----~i-~~v~~ss~~~~~~~~~-----------  125 (307)
T d1eq2a_          68 DVEAIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTS-----------  125 (307)
T ss_dssp             SCCEEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCS-----------
T ss_pred             chhhhhhhccccccc------ccccccccccccccccccccccccc----cc-cccccccccccccccc-----------
Confidence            788999988754332      2244556778888888888876543    22 4555555444322210           


Q ss_pred             chhHHHHHHHHHHhhhhhchhhhhhcCCCCCCchhhHhHHHHHHHHHHHHHhCCCeEEEeecCCeeecC
Q 023896          166 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  234 (275)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~i~vn~v~pG~v~T~  234 (275)
                                          ....+..+..+...|+.+|.+.+.+++.+...+ ++.+..+.|..+..|
T Consensus       126 --------------------~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         126 --------------------DFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGP  173 (307)
T ss_dssp             --------------------CBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESS
T ss_pred             --------------------cccccccccccccccccccchhhhhcccccccc-ccccccccceeEeec
Confidence                                000111122456789999999999999998776 555666666666554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.94  E-value=1.4e-05  Score=61.08  Aligned_cols=75  Identities=20%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+|+|+|.|| |.+|+.+|+.|+++|++|++++|+.++++...+.+.    .   ......+..........+.      
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~----~---~~~~~~~~~~~~~~~~~i~------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ----H---STPISLDVNDDAALDAEVA------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT----T---EEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc----c---cccccccccchhhhHhhhh------
Confidence            3689999987 999999999999999999999999998877654321    1   3344445555444444432      


Q ss_pred             CCccEEEcCC
Q 023896           85 GKLDILTKGD   94 (275)
Q Consensus        85 g~id~li~~a   94 (275)
                       ..|.++...
T Consensus        67 -~~~~~i~~~   75 (182)
T d1e5qa1          67 -KHDLVISLI   75 (182)
T ss_dssp             -TSSEEEECS
T ss_pred             -ccceeEeec
Confidence             456665543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.93  E-value=1.3e-05  Score=62.11  Aligned_cols=79  Identities=14%  Similarity=0.096  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.+|||+||+||+|...++-....|++||.++|+.++.+...    ..+..      ..+|..+++..+...+....  
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~------~vi~~~~~~~~~~~~~~~~~--   96 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFD------AAFNYKTVNSLEEALKKASP--   96 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCS------EEEETTSCSCHHHHHHHHCT--
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhh------hhcccccccHHHHHHHHhhc--
Confidence            4789999999999999999988899999999999987654432    22222      22455666555544443321  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ..+|+++.+.|
T Consensus        97 ~Gvd~v~D~vG  107 (182)
T d1v3va2          97 DGYDCYFDNVG  107 (182)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCCceeEEecC
Confidence            37999999887

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.93  E-value=7.6e-05  Score=55.71  Aligned_cols=118  Identities=9%  Similarity=0.048  Sum_probs=69.5

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .+++++.|.|+ |.+|..++..|+.+|  .+|++.++++++++..+.++...............|.   +          
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----------   68 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----------   68 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----------
Confidence            35678888896 999999999999988  5899999999887776667764221111133333332   1          


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                       ....-|++|..+|.....      .+.-.+.+..|..-.-.+.+.+.++   .+.+.++++|-
T Consensus        69 -~~~~adivvitag~~~~~------g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvtN  122 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQKP------GESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAAN  122 (146)
T ss_dssp             -GGTTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             -HhccccEEEEecccccCC------CCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeCC
Confidence             123679999999864432      1233444566654444444444332   34455666554

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.91  E-value=3.2e-05  Score=60.30  Aligned_cols=86  Identities=15%  Similarity=0.051  Sum_probs=57.2

Q ss_pred             CCEEEE-ecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh-
Q 023896            6 KKYAVV-TGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ-   83 (275)
Q Consensus         6 ~k~vlI-tGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   83 (275)
                      |.+++| +||+|++|...++-.-..|++||.+.|+..+.++..+.+.+.+..    .++.-|-.+..+....+.++... 
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----QVITEDQNNSREFGPTIKEWIKQS  104 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc----EEEeccccchhHHHHHHHHHHhhc
Confidence            455555 799999999998877778999999998887777776666665543    12222222223334444444433 


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                      .+++|+++.+.|
T Consensus       105 g~~vdvv~D~vg  116 (189)
T d1gu7a2         105 GGEAKLALNCVG  116 (189)
T ss_dssp             TCCEEEEEESSC
T ss_pred             cCCceEEEECCC
Confidence            347999998876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2e-05  Score=60.54  Aligned_cols=79  Identities=15%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+||+|++|...++-+...|++|+.+++++++.+.+ ++   .+..      ..+|.++++-.+++.+....  
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~---~Ga~------~vi~~~~~~~~~~i~~~t~~--   95 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAH------EVFNHREVNYIDKIKKYVGE--   95 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCS------EEEETTSTTHHHHHHHHHCT--
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cc---cCcc------cccccccccHHHHhhhhhcc--
Confidence            578999999999999999998888999999999987665443 22   2221      22477776544443332221  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ..+|+++.+.|
T Consensus        96 ~g~d~v~d~~g  106 (174)
T d1yb5a2          96 KGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEEESCH
T ss_pred             CCceEEeeccc
Confidence            26899999876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=2.6e-05  Score=60.51  Aligned_cols=82  Identities=21%  Similarity=0.226  Sum_probs=61.5

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHH---HHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVE---KLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.++.++...   ++.....    ......|+.+.+++.....
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD----CVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC----cceEeeecccccchhhhhc
Confidence            467899999999 7999999999999998 78899998876665443   3433322    3455678888777655443


Q ss_pred             HHHhhcCCccEEEcCCcc
Q 023896           79 FIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (275)
                             ..|++||+...
T Consensus        90 -------~~diiIN~Tp~  100 (182)
T d1vi2a1          90 -------SADILTNGTKV  100 (182)
T ss_dssp             -------TCSEEEECSST
T ss_pred             -------ccceeccccCC
Confidence                   78999998743

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.85  E-value=0.00015  Score=54.11  Aligned_cols=121  Identities=16%  Similarity=0.174  Sum_probs=76.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHH
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      |.+..++++.|.|| |.+|..++..|+..|.  ++++.++++.+++..+.++.+... ....+.+...|.   +      
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~------   70 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D------   70 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G------
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H------
Confidence            77778888999997 9999999999999875  799999999888777777765321 111133333222   1      


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                           .+..-|++|..+|......   .+.   .+.+..|.--.-.+.+.+.++   .+.+.++++|-
T Consensus        71 -----~l~daDvvvitag~~~~~~---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvtN  124 (148)
T d1ldna1          71 -----DCRDADLVVICAGANQKPG---ETR---LDLVDKNIAIFRSIVESVMAS---GFQGLFLVATN  124 (148)
T ss_dssp             -----GTTTCSEEEECCSCCCCTT---TCS---GGGHHHHHHHHHHHHHHHHHH---TCCSEEEECSS
T ss_pred             -----HhccceeEEEecccccccC---cch---hHHHHHHHHHHHHHHHHHHhh---CCCceEEEecC
Confidence                 1236799999998654321   122   233444543333344444332   34567777766

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=3.7e-05  Score=59.17  Aligned_cols=80  Identities=14%  Similarity=0.191  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|||+||+|++|..+++-....|++|+.++++.++.+... ++   +..      ..+|.++++-.+++.+ +.+ -
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~------~vi~~~~~d~~~~v~~-~t~-g   95 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAW------QVINYREEDLVERLKE-ITG-G   95 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTTSCHHHHHHH-HTT-T
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCe------EEEECCCCCHHHHHHH-HhC-C
Confidence            4789999999999999999988888999999999998866543 33   211      2357777654444322 221 1


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      ..+|+++.+.|.
T Consensus        96 ~g~d~v~d~~g~  107 (179)
T d1qora2          96 KKVRVVYDSVGR  107 (179)
T ss_dssp             CCEEEEEECSCG
T ss_pred             CCeEEEEeCccH
Confidence            368999998874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.76  E-value=0.00013  Score=55.10  Aligned_cols=74  Identities=18%  Similarity=0.299  Sum_probs=56.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++++++||.|+ |++|..+++.|...|+ ++.++.|+.++++...+++..        ...     ..+++.+.+.   
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~--------~~~-----~~~~~~~~l~---   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG--------EAV-----RFDELVDHLA---   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC--------EEC-----CGGGHHHHHH---
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc--------ccc-----cchhHHHHhc---
Confidence            568899999998 9999999999999998 699999999988888776531        111     2234333333   


Q ss_pred             hhcCCccEEEcCCccc
Q 023896           82 TQFGKLDILTKGDAEV   97 (275)
Q Consensus        82 ~~~g~id~li~~ag~~   97 (275)
                          ..|++|++.+..
T Consensus        84 ----~~Divi~atss~   95 (159)
T d1gpja2          84 ----RSDVVVSATAAP   95 (159)
T ss_dssp             ----TCSEEEECCSSS
T ss_pred             ----cCCEEEEecCCC
Confidence                789999998743

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.75  E-value=8.2e-05  Score=56.62  Aligned_cols=82  Identities=24%  Similarity=0.251  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+|+|+| +|+||...+..+...|++|+++++++.+.+.+.+ +   +..    ..+..|-. .++.....+++.+.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~---ga~----~~~~~~~~-~~~~~~~~~~~~~~~   95 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GAD----VTLVVDPA-KEEESSIIERIRSAI   95 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCS----EEEECCTT-TSCHHHHHHHHHHHS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c---CCc----EEEecccc-ccccchhhhhhhccc
Confidence            478899997 5899999998888899999999999988655533 2   211    12222322 233445556666665


Q ss_pred             C-CccEEEcCCcc
Q 023896           85 G-KLDILTKGDAE   96 (275)
Q Consensus        85 g-~id~li~~ag~   96 (275)
                      | .+|++|.++|.
T Consensus        96 g~g~D~vid~~g~  108 (170)
T d1e3ja2          96 GDLPNVTIDCSGN  108 (170)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             ccCCceeeecCCC
Confidence            5 68999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.74  E-value=1.7e-05  Score=61.29  Aligned_cols=108  Identities=14%  Similarity=0.061  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.+|||+||+||+|...++-....|++|+.++++.++.+...+    .+..    .  ..|-.+.  ..+..+.+  .-
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~----lGa~----~--vi~~~~~--~~~~~~~~--~~   96 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK----E--VLAREDV--MAERIRPL--DK   96 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS----E--EEECC-----------C--CS
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh----cccc----e--eeecchh--HHHHHHHh--hc
Confidence            47889999999999999988888889999999999887655432    2221    1  1232221  11111111  12


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccccCCCc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP  154 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  154 (275)
                      +++|+++.+.|...+                          ...+..++  ++|+++.++...+.....+
T Consensus        97 ~gvD~vid~vgg~~~--------------------------~~~l~~l~--~~Griv~~G~~~g~~~~~~  138 (176)
T d1xa0a2          97 QRWAAAVDPVGGRTL--------------------------ATVLSRMR--YGGAVAVSGLTGGAEVPTT  138 (176)
T ss_dssp             CCEEEEEECSTTTTH--------------------------HHHHHTEE--EEEEEEECSCCSSSCCCCC
T ss_pred             cCcCEEEEcCCchhH--------------------------HHHHHHhC--CCceEEEeecccCcccCCC
Confidence            489999999874322                          12344443  3589999999877765543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.71  E-value=7.5e-05  Score=57.51  Aligned_cols=77  Identities=16%  Similarity=0.135  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +|.+|||+||+|++|...+..+...|++|++++++.++.+.+    .+.+..      ...|..+++-.+    ++.+..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~------~vi~~~~~~~~~----~v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVE------YVGDSRSVDFAD----EILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCS------EEEETTCSTHHH----HHHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccc------ccccCCccCHHH----HHHHHh
Confidence            478999999999999999998888899999999988764432    233221      224555554333    333332


Q ss_pred             --CCccEEEcCCc
Q 023896           85 --GKLDILTKGDA   95 (275)
Q Consensus        85 --g~id~li~~ag   95 (275)
                        .++|+++.+.|
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence              26999999887

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=4.8e-05  Score=50.24  Aligned_cols=42  Identities=29%  Similarity=0.286  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      ++.++||+||+||+|...+..+...|++|+.+.+++++.+..
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578899999999999999998788899999999998876554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=0.00012  Score=55.96  Aligned_cols=50  Identities=18%  Similarity=0.151  Sum_probs=44.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS   53 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~   53 (275)
                      +.+||.|||.|+ ||-+++++..|.+.|.+|.++.|+.++++...+.+...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~   64 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT   64 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence            357899999998 89999999999999999999999999988887766544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00017  Score=54.99  Aligned_cols=80  Identities=26%  Similarity=0.310  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|+|.|+ |++|...+..+...|+ +|+++++++.+++.+. ++   +..    ..+.  . +.++.....+.+...
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---Ga~----~~~~--~-~~~~~~~~~~~~~~~   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD----LVLQ--I-SKESPQEIARKVEGQ   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS----EEEE--C-SSCCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---CCc----cccc--c-ccccccccccccccc
Confidence            4678999987 9999999998888998 7999999998876543 32   211    1222  2 223333344444444


Q ss_pred             cC-CccEEEcCCcc
Q 023896           84 FG-KLDILTKGDAE   96 (275)
Q Consensus        84 ~g-~id~li~~ag~   96 (275)
                      +| .+|+++.+.|.
T Consensus        94 ~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 LGCKPEVTIECTGA  107 (171)
T ss_dssp             HTSCCSEEEECSCC
T ss_pred             CCCCceEEEeccCC
Confidence            54 78999999884

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=6.2e-05  Score=60.30  Aligned_cols=84  Identities=14%  Similarity=0.231  Sum_probs=58.5

Q ss_pred             CcccCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEE
Q 023896            1 MAEATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ   64 (275)
Q Consensus         1 m~~~~~k~vlItGa----------------~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~   64 (275)
                      |.+++|++||||+|                ||-.|.++|+.+..+|++|+++......          .  .+..+..+ 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~--~p~~~~~~-   67 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------P--TPPFVKRV-   67 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------C--CCTTEEEE-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------C--cccccccc-
Confidence            57899999999987                5889999999999999999998754421          0  01113333 


Q ss_pred             ecccChHHHHHHHHHHHhhcCCccEEEcCCcccccch
Q 023896           65 LDISDLASVSSLADFIKTQFGKLDILTKGDAEVDWSK  101 (275)
Q Consensus        65 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (275)
                       .+...   ..+.+.+.+.+...|++|++|.+..+.+
T Consensus        68 -~~~t~---~~m~~~~~~~~~~~D~~i~aAAvsDf~~  100 (223)
T d1u7za_          68 -DVMTA---LEMEAAVNASVQQQNIFIGCAAVADYRA  100 (223)
T ss_dssp             -ECCSH---HHHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             -eehhh---HHHHHHHHhhhccceeEeeeechhhhhh
Confidence             23333   3444445555567899999998876643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.50  E-value=0.00033  Score=53.45  Aligned_cols=75  Identities=15%  Similarity=0.209  Sum_probs=57.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+++|.|+|.|+ ||-+++++..|.+.+.+|+++.|+.++++...+.+.....    +..+..|-.              
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~----~~~~~~~~~--------------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGN----IQAVSMDSI--------------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSC----EEEEEGGGC--------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccc----cchhhhccc--------------
Confidence            357899999988 8889999999999888999999999999998888765421    333333211              


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                      .....|++||+...
T Consensus        76 ~~~~~diiIN~tp~   89 (171)
T d1p77a1          76 PLQTYDLVINATSA   89 (171)
T ss_dssp             CCSCCSEEEECCCC
T ss_pred             cccccceeeecccc
Confidence            12478999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.50  E-value=0.00014  Score=53.08  Aligned_cols=71  Identities=18%  Similarity=0.332  Sum_probs=54.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      +|+|.|+ |-+|+.+++.|.++|+.|+++++|++..+...+++   +     ..++..|.++++.++++-      ....
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~-----~~vi~Gd~~~~~~l~~~~------i~~a   66 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---D-----ALVINGDCTKIKTLEDAG------IEDA   66 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---S-----SEEEESCTTSHHHHHHTT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---h-----hhhccCcccchhhhhhcC------hhhh
Confidence            6899998 99999999999999999999999998877654432   1     567889999988655441      1256


Q ss_pred             cEEEcC
Q 023896           88 DILTKG   93 (275)
Q Consensus        88 d~li~~   93 (275)
                      |.++..
T Consensus        67 ~~vv~~   72 (132)
T d1lssa_          67 DMYIAV   72 (132)
T ss_dssp             SEEEEC
T ss_pred             hhhccc
Confidence            666664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=0.00033  Score=53.39  Aligned_cols=74  Identities=15%  Similarity=0.263  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|++|||+||+|++|...+.-+...|++|+.+++++++.+... +   .+..      ...|..+..      +++. ..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~---lGa~------~~i~~~~~~------~~~~-~~   89 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAE------EAATYAEVP------ERAK-AW   89 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCS------EEEEGGGHH------HHHH-HT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-c---cccc------eeeehhhhh------hhhh-cc
Confidence            5789999999999999999888888999999999887655443 2   2222      123443221      2222 23


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      .++|+++.+.|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            47999999766

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=0.00033  Score=54.15  Aligned_cols=104  Identities=13%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEE-EEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVV-LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      +.+|||+||+||+|...++-.-..|++++ .++++.++.....+++   +..      ...|..+++. .+.++++..  
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad------~vi~~~~~~~-~~~~~~~~~--   98 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD------AAVNYKTGNV-AEQLREACP--   98 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS------EEEETTSSCH-HHHHHHHCT--
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce------EEeeccchhH-HHHHHHHhc--
Confidence            47899999999999999888777898644 4566665555544433   211      3456665544 333333322  


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCccc
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  149 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  149 (275)
                      ..+|+++.+.|...                          ++..++.++  ++|+++.++++.+.
T Consensus        99 ~GvDvv~D~vGg~~--------------------------~~~~~~~l~--~~G~iv~~G~~s~~  135 (187)
T d1vj1a2          99 GGVDVYFDNVGGDI--------------------------SNTVISQMN--ENSHIILCGQISQY  135 (187)
T ss_dssp             TCEEEEEESSCHHH--------------------------HHHHHTTEE--EEEEEEEC------
T ss_pred             cCceEEEecCCchh--------------------------HHHHhhhcc--ccccEEEecccccc
Confidence            36999999887310                          123344443  45899998876554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.32  E-value=0.0014  Score=48.42  Aligned_cols=115  Identities=13%  Similarity=0.029  Sum_probs=69.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.||+|.+|.+++..|+.+|.  ++++.+.+..+.+  +.++.....    ......-+. ..+..+.+       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~----~~~~~~~~~-~~~~~~~~-------~   67 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET----RATVKGYLG-PEQLPDCL-------K   67 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS----SCEEEEEES-GGGHHHHH-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhh----hcCCCeEEc-CCChHHHh-------C
Confidence            578999999999999999998875  6999998765433  334543211    111222222 33333222       2


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      .-|++|..+|.....   .++.   .+.++.|..-.-.+++.+.++   .+.+.++++|.
T Consensus        68 ~aDivVitag~~~~~---g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtN  118 (144)
T d1mlda1          68 GCDVVVIPAGVPRKP---GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISN  118 (144)
T ss_dssp             TCSEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CCCEEEECCCcCCCC---CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEecC
Confidence            689999999864322   1233   334666666555555555443   34567777776

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.26  E-value=0.0013  Score=48.47  Aligned_cols=114  Identities=11%  Similarity=0.078  Sum_probs=64.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.|+ |.+|..++..|+.++.  ++++.+++.+.++..+.++.+.............|   .           +.+.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~-----------~~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y-----------SDVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G-----------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H-----------HHhC
Confidence            4556687 9999999999999875  79999999987766666776532211112222111   1           1123


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      .-|++|..||.....      .+.-.+.+..|..-...+++.+.++   .+.+.++++|-
T Consensus        68 ~adivvitag~~~~~------~~~r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP------GETRLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC------------CHHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCceEEEecccccCc------CcchhHHhhHHHHHHHHHHHHhhcc---CCCceEEEecC
Confidence            679999999865332      1223345566664444444444332   34566777665

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.26  E-value=0.00052  Score=51.99  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|+|.|++|++|..++..+...|+ +|+++++++.+.+...+ +   +..      ...|.++++-.++..+...  
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~------~~i~~~~~~~~~~~~~~~~--   94 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GAD------YVINASMQDPLAEIRRITE--   94 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCS------EEEETTTSCHHHHHHHHTT--
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCc------eeeccCCcCHHHHHHHHhh--
Confidence            467899999999999999998888885 89999999877555532 2   211      2345555554444433221  


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                      -+.+|+++.++|.
T Consensus        95 ~~~~d~vid~~g~  107 (170)
T d1jvba2          95 SKGVDAVIDLNNS  107 (170)
T ss_dssp             TSCEEEEEESCCC
T ss_pred             cccchhhhccccc
Confidence            1369999998874

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.24  E-value=0.0011  Score=50.80  Aligned_cols=80  Identities=24%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|||+|+ |+||...+..+...|+ +|+++++++++.+.+ +++   +..      ..+|.++.+ .....+++.+.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~------~vi~~~~~~-~~~~~~~i~~~   95 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GAD------LTLNRRETS-VEERRKAIMDI   95 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCS------EEEETTTSC-HHHHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cce------EEEeccccc-hHHHHHHHHHh
Confidence            5789999997 8999999988888898 799999999887654 333   211      223444432 23333444443


Q ss_pred             c-C-CccEEEcCCcc
Q 023896           84 F-G-KLDILTKGDAE   96 (275)
Q Consensus        84 ~-g-~id~li~~ag~   96 (275)
                      . + .+|+++.+.|.
T Consensus        96 ~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          96 THGRGADFILEATGD  110 (182)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCceEEeecCCc
Confidence            3 2 58999999874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.17  E-value=0.00056  Score=52.23  Aligned_cols=79  Identities=11%  Similarity=0.062  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++.+... ++..       .  ..+|..+++..+++.+ ..+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa-------~--~~i~~~~~~~~~~v~~-~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGA-------T--DILNYKNGHIEDQVMK-LTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTC-------S--EEECGGGSCHHHHHHH-HTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCc-------c--ccccccchhHHHHHHH-Hhhc
Confidence            4778999986 8999998888888897 7999999998765553 3321       1  2346665444333322 2211


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       ..+|++|.++|.
T Consensus        95 -~G~D~vid~~g~  106 (174)
T d1jqba2          95 -KGVDRVIMAGGG  106 (174)
T ss_dssp             -SCEEEEEECSSC
T ss_pred             -cCcceEEEccCC
Confidence             259999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.11  E-value=0.00022  Score=54.32  Aligned_cols=42  Identities=26%  Similarity=0.328  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+|||+||+||+|...++-....|++||.++++.++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            356899999999999999877777899999999998876554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.11  E-value=0.0027  Score=47.23  Aligned_cols=115  Identities=15%  Similarity=0.080  Sum_probs=64.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC---------EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI---------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~---------~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      +|.|+||+|.+|..++..|+..+.         +++...++..+++....++.......  ...+...  +.+  .+   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~--~~---   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--LAGLEAT--DDP--KV---   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EEEEEEE--SCH--HH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccc--ccccccC--Cch--hh---
Confidence            799999999999999999998653         23333455555555555555432221  2222221  111  11   


Q ss_pred             HHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CC-CCeEEEEec
Q 023896           79 FIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SD-SPRLVNLSS  145 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~-~g~iv~vsS  145 (275)
                          .+...|++|..+|.....   .++.+   +.+..|+    .+++.+.+.+.+ .+ .+.++++|-
T Consensus        77 ----~~~~advViitaG~~~~p---g~~r~---dl~~~N~----~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 ----AFKDADYALLVGAAPRKA---GMERR---DLLQVNG----KIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ----HTTTCSEEEECCCCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ----hcccccEEEeecCcCCCC---CCcHH---HHHHHHH----HHHHHHHHHHHHhCCCCcEEEEecC
Confidence                123789999999875432   23333   3344444    444555555544 23 345666654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.05  E-value=0.0018  Score=48.37  Aligned_cols=120  Identities=11%  Similarity=-0.052  Sum_probs=69.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhc---CCCCCceeEEEecccChHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +.+++.|.|+ |.+|..++..|+..+. ++++.+.++..++..+..+...   ....  .....  -.+.   +...   
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~--~~~~~--~~~~---~~~~---   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTN--VSVRA--EYSY---EAAL---   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCC--CCEEE--ECSH---HHHH---
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCe--eEEec--cCch---hhhh---
Confidence            4566777897 9999999998888884 8999999988777766666542   1111  11111  1111   1112   


Q ss_pred             HhhcCCccEEEcCCcccccchhh--ccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVC--YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                          ..-|++|..+|.....+..  ..+.   .+.+..|.--...+++.+..+   .+.+.++++|.
T Consensus        75 ----~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~---~p~aiviivsN  131 (154)
T d1pzga1          75 ----TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTN  131 (154)
T ss_dssp             ----TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             ----cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeCC
Confidence                2679999999865432211  1122   233445554444444444332   34567777766

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.02  E-value=0.0055  Score=44.92  Aligned_cols=114  Identities=13%  Similarity=0.031  Sum_probs=67.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecCh--hHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++.|.||+|.+|..++..|+.++.  ++++.+.+.  ..++..+.++.....-.....+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999875  799998643  334444445553111111133333332   21           


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEec
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSS  145 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  145 (275)
                      ...-|++|..||....+   .+   .-.+.++.|.-    +++.+.+.+.+. +.+.++++|-
T Consensus        68 ~~~aDiVvitaG~~~~~---g~---~R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP---GQ---TRIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCT---TC---CHHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEeccccccc---CC---chhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence            13679999999864322   12   33445555554    445555555444 4566666655

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.02  E-value=0.0013  Score=49.97  Aligned_cols=80  Identities=14%  Similarity=0.213  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccCh-HHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+...+ +   +.    .  ...|..+. +.+.+..+....
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~---Ga----~--~~i~~~~~~~~~~~~~~~~~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V---GA----T--ECVNPQDYKKPIQEVLTEMSN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TC----S--EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h---CC----e--eEEecCCchhHHHHHHHHHhc
Confidence            4789999999 7899999999999985 89999999988665432 2   11    1  12333332 334444443322


Q ss_pred             hcCCccEEEcCCccc
Q 023896           83 QFGKLDILTKGDAEV   97 (275)
Q Consensus        83 ~~g~id~li~~ag~~   97 (275)
                        +.+|+++.+.|..
T Consensus        97 --~G~D~vid~~G~~  109 (176)
T d2jhfa2          97 --GGVDFSFEVIGRL  109 (176)
T ss_dssp             --SCBSEEEECSCCH
T ss_pred             --CCCCEEEecCCch
Confidence              4799999998753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.02  E-value=0.00031  Score=51.05  Aligned_cols=73  Identities=15%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |.++|.|+ |-+|..+++.|.+.|++|++++.|+++.+...    ..+     ..++..|.++++.+.++      ...+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~-----~~~~~gd~~~~~~l~~a------~i~~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA-----THAVIANATEENELLSL------GIRN   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC-----SEEEECCTTCTTHHHHH------TGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC-----Ccceeeecccchhhhcc------CCcc
Confidence            56777777 89999999999999999999999998766542    222     44667899988875544      1125


Q ss_pred             ccEEEcCCc
Q 023896           87 LDILTKGDA   95 (275)
Q Consensus        87 id~li~~ag   95 (275)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            677766554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.00048  Score=52.84  Aligned_cols=41  Identities=29%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +.++||+||+||+|...++-.-..|++||.++|+.++.+..
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            45899999999999999888888899999999999886544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.0087  Score=44.67  Aligned_cols=118  Identities=14%  Similarity=0.142  Sum_probs=73.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCC-CCceeEEEecccChHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADF   79 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   79 (275)
                      .++...+.|.|+ |.+|..++..|+..|.  ++++.+++.+.++..+.+++..... .........|.   +        
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~--------   83 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N--------   83 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G--------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h--------
Confidence            345556888896 9999999999999875  7999999998888777777753211 11122222222   1        


Q ss_pred             HHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEec
Q 023896           80 IKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSS  145 (275)
Q Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS  145 (275)
                         ....-|++|..||......   ++..   +.++.|    ..+++.+.+.+.+ .+.+.++++|-
T Consensus        84 ---~~~~adivvitag~~~~~~---~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 ---VSANSKLVIITAGARMVSG---QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ---GGTTEEEEEECCSCCCCTT---TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ---hhccccEEEEecccccCCC---CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence               1236799999998654332   2222   223333    3455566665543 34567777776

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.98  E-value=0.0079  Score=44.96  Aligned_cols=116  Identities=13%  Similarity=0.116  Sum_probs=72.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .++++.|.|+ |.+|..++..|+..|.  ++++.+++++.++..+.+++.... ..........|..   +         
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~---------   85 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V---------   85 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G---------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h---------
Confidence            4567888896 9999999999999985  899999999888777777765211 1111222222222   1         


Q ss_pred             hhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEec
Q 023896           82 TQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSS  145 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS  145 (275)
                        +..-|++|..||.....   .++.   .+.+..|..    +++.+.+.+.+ .+.+-++++|-
T Consensus        86 --~~~adiVVitAg~~~~~---g~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 --TANSKIVVVTAGVRQQE---GESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             --GTTCSEEEECCSCCCCT---TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             --cccccEEEEecCCcccc---Ccch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence              13679999999965432   1232   234444544    44445554443 34567777776

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.96  E-value=0.0068  Score=44.56  Aligned_cols=113  Identities=12%  Similarity=0.106  Sum_probs=65.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChh--HHHHHHHHHHhc---CCCCCceeEEEecccChHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEK--RGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~--~~~~~~~~l~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++.|.||+|.+|..++..|+.++.  ++++.+++..  +++..+.++...   ......+.....  .+.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~--~d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESD--ENL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEET--TCG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCc--chH----------
Confidence            488999999999999999999983  8999998763  445555555542   111111111111  111          


Q ss_pred             HhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEE
Q 023896           81 KTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  143 (275)
Q Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  143 (275)
                       +.+..-|++|..||.....+   ++   -.+.+..|..=.-.+.+.+.+    .....|+.+
T Consensus        70 -~~l~~aDvVVitAG~~~~~g---~s---R~dl~~~Na~iv~~i~~~i~~----~~~~~iivV  121 (145)
T d1hyea1          70 -RIIDESDVVIITSGVPRKEG---MS---RMDLAKTNAKIVGKYAKKIAE----ICDTKIFVI  121 (145)
T ss_dssp             -GGGTTCSEEEECCSCCCCTT---CC---HHHHHHHHHHHHHHHHHHHHH----HCCCEEEEC
T ss_pred             -HHhccceEEEEecccccCCC---CC---hhhhhhhhHHHHHHHHHHHhc----cCCCeEEEE
Confidence             11236899999999643321   23   334556665544444444433    333445544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.95  E-value=0.0058  Score=44.64  Aligned_cols=113  Identities=16%  Similarity=0.099  Sum_probs=68.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.|+ |.+|..++..|+.++  .++++.++++++++....++.....-.........|   .++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            4667796 899999999999887  489999999988877666665421111112332222   211           12


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS  145 (275)
                      .-|++|..+|.....+   ++   -.+.+..|.    .+++.+.+.+.+ .+.+.++++|-
T Consensus        67 ~adivvitag~~~~~g---~~---r~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPG---ET---RLQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCSS---CC---HHHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCCC---cc---hhhhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence            6799999998754321   22   223344453    345555555544 34566666665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.95  E-value=0.0096  Score=43.60  Aligned_cols=114  Identities=15%  Similarity=0.119  Sum_probs=67.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.|+ |.+|.+++..|+.+|.  ++++.++++.+++..+.+++....-.........  .+.++    .       .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~-------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C-------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G-------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----h-------h
Confidence            4566686 9999999999999885  7999999998877766666643111111222211  11111    1       2


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEec
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSS  145 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  145 (275)
                      .-|++|..||.....   .++.   .+.+..|.-    +++.+.+.+.+. +.+.++++|-
T Consensus        69 daDvVVitaG~~~~~---g~~R---~dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQKP---GQSR---LELVGATVN----ILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCcEEEEecccccCC---CCch---hhhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            579999999965432   1233   344566654    444444444333 3456666664

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0018  Score=48.79  Aligned_cols=74  Identities=19%  Similarity=0.259  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|+|.|+ |+||...+..+...|+++++++++.++.+.. +++.   ..      ..+|..+.+...       ...
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lG---ad------~~i~~~~~~~~~-------~~~   91 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALG---AD------EVVNSRNADEMA-------AHL   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHT---CS------EEEETTCHHHHH-------TTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hccC---Cc------EEEECchhhHHH-------Hhc
Confidence            4789999986 8999998888888899999999988876433 3432   11      224555544321       222


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      .++|+++.+.|.
T Consensus        92 ~~~D~vid~~g~  103 (168)
T d1uufa2          92 KSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEEECCSS
T ss_pred             CCCceeeeeeec
Confidence            479999998874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.86  E-value=0.002  Score=49.05  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+ +..       .  ...|..+.+. .+...+... 
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA-------~--~~in~~~~~~~~~~~~~~~~-   96 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGA-------T--ECISPKDSTKPISEVLSEMT-   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTC-------S--EEECGGGCSSCHHHHHHHHH-
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCC-------c--EEECccccchHHHHHHHHhc-
Confidence            4789999987 9999999999999995 89999999998775533 321       1  1224444333 222222221 


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                       -..+|++|.+.|.
T Consensus        97 -g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 -GNNVGYTFEVIGH  109 (176)
T ss_dssp             -TSCCCEEEECSCC
T ss_pred             -cccceEEEEeCCc
Confidence             1379999998874

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.84  E-value=0.0072  Score=45.91  Aligned_cols=116  Identities=16%  Similarity=0.002  Sum_probs=63.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      .+|.||||+|.||..++..|+....       .+.+.+.+..  .++...-+++......  ...+  -.++..  .   
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~--~~~~--~~~~~~--~---   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL--LREV--SIGIDP--Y---   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EEEE--EEESCH--H---
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc--ccCc--cccccc--h---
Confidence            3599999999999999999997521       3445555442  3444444555432221  1111  112211  1   


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-C-CCeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-D-SPRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-~g~iv~vsS  145 (275)
                          +.+...|++|..+|.....   .++   ..+.+..|.    .+++.+.+.+.+. + ...|+.+|-
T Consensus        96 ----~~~~~aDvVvi~ag~~rkp---g~t---R~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          96 ----EVFEDVDWALLIGAKPRGP---GME---RAALLDING----QIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ----HHTTTCSEEEECCCCCCCT---TCC---HHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ----hhccCCceEEEeeccCCCC---CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEecC
Confidence                2234789999999874332   233   344555564    4445555555442 3 345555554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.011  Score=43.29  Aligned_cols=115  Identities=11%  Similarity=0.026  Sum_probs=68.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASK---GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~---g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++.|+|++|.+|.+++..|+.+   ..++++.+.++ ..+..+.++++..... ....    +...++.+. ++      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~-~~~~----~~~~~~~~~-~~------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAV-KIKG----FSGEDATPA-LE------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSC-EEEE----ECSSCCHHH-HT------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCcccc-CCcE----EEcCCCccc-cC------
Confidence            5789999999999999988643   46899999865 3445455666543221 1111    122222221 22      


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                       .-|++|..+|....++   ++   -.+.+..|.--.-.+.+.+.++   .+.+.++++|.
T Consensus        69 -~aDvvvitaG~~~k~g---~~---R~dl~~~N~~i~~~v~~~i~~~---~p~aivivvtN  119 (145)
T d2cmda1          69 -GADVVLISAGVRRKPG---MD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (145)
T ss_dssp             -TCSEEEECCSCCCCTT---CC---GGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             -CCCEEEECCCccCCCC---cc---hhhHHHHHHHHHHHHHHHHHhh---CCCcEEEEccC
Confidence             5699999999753321   23   3344666755555555555443   34567777777

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.80  E-value=0.0034  Score=46.96  Aligned_cols=41  Identities=20%  Similarity=0.319  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+|+|.|+ |++|...+.-+...|++|+++++++.+.+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4788999886 9999998888888899999999999876554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.76  E-value=0.0027  Score=48.11  Aligned_cols=78  Identities=14%  Similarity=0.145  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++.+.+.+. ++.   .    .  ...|..+++. .+.++++.. 
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~G---a----~--~~i~~~~~~~-~~~i~~~t~-   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG---A----T--HVINSKTQDP-VAAIKEITD-   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT---C----S--EEEETTTSCH-HHHHHHHTT-
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcC---C----e--EEEeCCCcCH-HHHHHHHcC-
Confidence            4788999997 89999999888788885 556677777655543 332   1    1  1245555443 333333322 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       +++|+++.+.|.
T Consensus        95 -gg~D~vid~~G~  106 (174)
T d1f8fa2          95 -GGVNFALESTGS  106 (174)
T ss_dssp             -SCEEEEEECSCC
T ss_pred             -CCCcEEEEcCCc
Confidence             479999999884

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.71  E-value=0.0098  Score=43.69  Aligned_cols=118  Identities=14%  Similarity=0.078  Sum_probs=68.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      |++.|.|+ |.+|..++..|+.+|.  ++++.++++.+++....++.+... .........   .+.++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH-----------
Confidence            56778895 9999999999998874  899999999987776666664311 111122222   22221           


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEec
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSS  145 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  145 (275)
                      +-.-|++|..||......  +...+.-.+.++.|.    .+++.+.+.+.+. +.+.++++|-
T Consensus        67 l~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQ--DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC---------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hccccEEEEecccccccc--ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence            126799999998643211  001111223344454    4555555555444 4456666665

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.70  E-value=0.0022  Score=48.71  Aligned_cols=79  Identities=18%  Similarity=0.240  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+ +   +.    .  ...|.++.+. +.+..+... 
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l---Ga----~--~~i~~~~~d~~~~~~~~~~~-   94 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GA----T--ECLNPKDYDKPIYEVICEKT-   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TC----S--EEECGGGCSSCHHHHHHHHT-
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c---CC----c--EEEcCCCchhHHHHHHHHhc-
Confidence            4789999986 8999999999998896 79999999988766532 2   21    1  1235554442 333333222 


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                       -+.+|+++.+.|.
T Consensus        95 -~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 -NGGVDYAVECAGR  107 (174)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -CCCCcEEEEcCCC
Confidence             2479999998874

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.63  E-value=0.0047  Score=45.49  Aligned_cols=83  Identities=13%  Similarity=0.157  Sum_probs=53.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      +..-|++.|.||.|.+|..+++.|.++|++|.+.+|+.........    ....   .....   .....+...+.++..
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~---~v~~~---~~~~~~~~v~~~~~~   75 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANAD---VVIVS---VPINLTLETIERLKP   75 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCS---EEEEC---SCGGGHHHHHHHHGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhcc---ccccc---cchhhheeeeecccc
Confidence            3445789999999999999999999999999999998865443221    1111   22222   334455666666655


Q ss_pred             hcCCccEEEcCCc
Q 023896           83 QFGKLDILTKGDA   95 (275)
Q Consensus        83 ~~g~id~li~~ag   95 (275)
                      ...+=.+++..+.
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            4433234444443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.59  E-value=0.0049  Score=47.64  Aligned_cols=116  Identities=10%  Similarity=-0.013  Sum_probs=68.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++.+++.+.+ +   +     .. ...|-.+++- .+.+.++.. 
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~---G-----a~-~~~~~~~~~~-~~~i~~~t~-   91 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---G-----FE-IADLSLDTPL-HEQIAALLG-   91 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---T-----CE-EEETTSSSCH-HHHHHHHHS-
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c---c-----cc-EEEeCCCcCH-HHHHHHHhC-
Confidence            4789999986 8999887777767777 78899999887665432 2   2     11 1234444333 333333322 


Q ss_pred             cCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           84 FGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      -..+|+++.+.|.......    ..      ..+..+.-..++..+..++  ++|+|+.++-
T Consensus        92 g~g~D~vid~vG~~~~~~~----~~------~~~~~~~~~~l~~~~~~~r--~gG~v~~~G~  141 (195)
T d1kola2          92 EPEVDCAVDAVGFEARGHG----HE------GAKHEAPATVLNSLMQVTR--VAGKIGIPGL  141 (195)
T ss_dssp             SSCEEEEEECCCTTCBCSS----TT------GGGSBCTTHHHHHHHHHEE--EEEEEEECSC
T ss_pred             CCCcEEEEECccccccCCc----cc------ceeecCcHHHHHHHHHHHh--cCCEEEEeee
Confidence            1368999998874322110    00      1123344445556666554  4679988874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.56  E-value=0.0054  Score=46.48  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChH-HHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA-SVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++... ++   +.    ..  ..|....+ .+....+... 
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~---Ga----~~--~i~~~~~~~~~~~~~~~~~-   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL---GA----TD--CLNPRELDKPVQDVITELT-   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TC----SE--EECGGGCSSCHHHHHHHHH-
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-Hh---CC----Cc--ccCCccchhhhhhhHhhhh-
Confidence            4789999975 9999999999999998 6888899998765442 22   21    11  23333322 3344444332 


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                       -+.+|+++.++|.
T Consensus        96 -~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 -AGGVDYSLDCAGT  108 (174)
T ss_dssp             -TSCBSEEEESSCC
T ss_pred             -cCCCcEEEEeccc
Confidence             2479999999984

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.51  E-value=0.0024  Score=48.61  Aligned_cols=49  Identities=14%  Similarity=0.277  Sum_probs=42.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS   53 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~   53 (275)
                      ++++|.|||.|+ ||.+++++..|.+.| +|.+..|+.++++...+.+...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            468999999988 789999999998777 8999999999999988877643

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.50  E-value=0.0023  Score=48.27  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=39.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l   50 (275)
                      ++|.|+|.|+ ||.+++++..|.+.|. +|.++.|+.++.+...+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 9999999999999997 7999999999888776654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.48  E-value=0.016  Score=42.20  Aligned_cols=115  Identities=20%  Similarity=0.103  Sum_probs=67.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g--~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++.|.|| |.+|..++..|+..+  .++++.++++.+++.....+..... ......+...  .+.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677796 999999999999987  4899999999877665555543210 0001222221  22211           2


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      ..-|++|..+|.....+   .+   -.+.+..|.--...+.+.+.++   .+.+-++++|-
T Consensus        68 ~dadvvvitag~~~~~g---~~---r~~l~~~N~~i~~~i~~~i~~~---~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG---MT---REDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTT---CC---HHHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCC---Cc---hHHHHHHHHHHHHHHHHHhhcc---CCCeEEEEecC
Confidence            36799999998644321   12   2344555555444444444332   34566666655

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.47  E-value=0.0037  Score=47.15  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      .+.+|+|.|+ |++|...+..+...|+ .|+++++++.+.+...+    .+.    ..  ..|.. ++.++...+.... 
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga----~~--~i~~~-~~~~~~~~~~~~~-   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGA----DH--VVDAR-RDPVKQVMELTRG-   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTC----SE--EEETT-SCHHHHHHHHTTT-
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----ccc----ce--eecCc-ccHHHHHHHhhCC-
Confidence            4688999986 9999998888877786 67778888877555432    221    11  23433 3444444332211 


Q ss_pred             cCCccEEEcCCcc
Q 023896           84 FGKLDILTKGDAE   96 (275)
Q Consensus        84 ~g~id~li~~ag~   96 (275)
                       ..+|+++.++|.
T Consensus        99 -~g~d~vid~~g~  110 (172)
T d1h2ba2          99 -RGVNVAMDFVGS  110 (172)
T ss_dssp             -CCEEEEEESSCC
T ss_pred             -CCceEEEEecCc
Confidence             269999999884

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0065  Score=44.77  Aligned_cols=76  Identities=13%  Similarity=0.138  Sum_probs=56.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   87 (275)
                      .++|.|. |-+|..+++.|.++|+++++++.++++.....+.....+     +.++..|.++++.++++-      ..+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~-----~~vi~Gd~~d~~~L~~a~------i~~a   72 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN-----ADVIPGDSNDSSVLKKAG------IDRC   72 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT-----CEEEESCTTSHHHHHHHT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCC-----cEEEEccCcchHHHHHhc------cccC
Confidence            3777887 799999999999999999999999887666655554332     778899999987654431      1256


Q ss_pred             cEEEcCCc
Q 023896           88 DILTKGDA   95 (275)
Q Consensus        88 d~li~~ag   95 (275)
                      |.+|...+
T Consensus        73 ~~vi~~~~   80 (153)
T d1id1a_          73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEccc
Confidence            77776643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0016  Score=44.12  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=34.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+++||+++|.|. |.-|.++++.|.++|++|++.+.+..
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            3688999999999 77899999999999999999997554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.41  E-value=0.012  Score=43.35  Aligned_cols=120  Identities=11%  Similarity=-0.017  Sum_probs=68.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++.|.|+ |++|..++..|+..+. ++++.+++.++++..+.+++.... ......+...+  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            45777786 9999999988888774 899999999887777666654210 00112233221  111           12


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS  145 (275)
                      ..-|++|..+|.....+..... ..-.+.+..|..    +++.+.+.+.+ .+.+.++++|-
T Consensus        70 ~~advvvitag~~~~~g~~~~~-~~R~~l~~~N~~----iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKE-WNRDDLLPLNNK----IMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTT-CCGGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccc-cchhHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            3679999999865433211111 122334555653    44444444433 34556666665

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.40  E-value=0.0024  Score=48.08  Aligned_cols=76  Identities=16%  Similarity=0.247  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++++.+.. +++.   ..    .+  .|..++.+..   +   ...
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lG---a~----~~--i~~~~~~~~~---~---~~~   89 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMG---AD----HY--IATLEEGDWG---E---KYF   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHT---CS----EE--EEGGGTSCHH---H---HSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccC---Cc----EE--eeccchHHHH---H---hhh
Confidence            4789999987 8999998887777899999999999877654 3332   11    11  2333332211   1   223


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                      +.+|.++.+.+..
T Consensus        90 ~~~d~vi~~~~~~  102 (168)
T d1piwa2          90 DTFDLIVVCASSL  102 (168)
T ss_dssp             SCEEEEEECCSCS
T ss_pred             cccceEEEEecCC
Confidence            5789998876643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.38  E-value=0.0057  Score=46.03  Aligned_cols=79  Identities=13%  Similarity=0.169  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC-hHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ ||+|...+..+...|+ .|+.+++++++.+.. +++...         ...|..+ .+.+.+.++....
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~lGa~---------~~i~~~~~~~~~~~~~~~~~~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGAT---------ECINPQDFSKPIQEVLIEMTD   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCS---------EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHhCCc---------EEEeCCchhhHHHHHHHHHcC
Confidence            4789999998 5999999998888896 677788888775543 344211         1234433 2344444443322


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus        97 --~g~D~vid~~G~  108 (176)
T d2fzwa2          97 --GGVDYSFECIGN  108 (176)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEeeecCCC
Confidence              379999999874

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0044  Score=47.87  Aligned_cols=45  Identities=24%  Similarity=0.234  Sum_probs=39.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~   51 (275)
                      =|+|.|.|| |-+|..+|..++.+|++|++.+++++.++...+.+.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            478889999 789999999999999999999999988776665544

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.31  E-value=0.0083  Score=44.65  Aligned_cols=41  Identities=20%  Similarity=0.304  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+.+|||.|+ |+||...+..+...|++|+++++++.+.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4788999875 9999998888888899999999999876544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.30  E-value=0.004  Score=47.11  Aligned_cols=42  Identities=29%  Similarity=0.181  Sum_probs=37.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      +|++.|.|+ |.+|.+++..|+++|++|.+.+|++++.+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478899998 999999999999999999999999987766543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.29  E-value=0.035  Score=40.29  Aligned_cols=115  Identities=16%  Similarity=0.085  Sum_probs=65.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCC-CCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      |++.|.|+ |.+|..++..|+.++. ++++.+.+++..+....++..... ......+...  .+.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH-----------h
Confidence            46667786 9999999999998874 899999988877666666543210 0000222211  11111           1


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~iv~vsS  145 (275)
                      ..-|++|..||.....+      +...+.+..|.    .+++.+.+.+.+ .+.+.++++|-
T Consensus        68 ~~advvvitag~~~~~~------~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKPG------MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCcC------cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            25799999998654321      22334455554    455566665554 34556666555

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.18  E-value=0.015  Score=43.51  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHH-HHHHHHHHHh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~   82 (275)
                      .|.+|+|.|+ ||+|...+..+...|. +|+.+++++++++...+    .+-.      ..+|..+++. +++..+....
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~GAd------~~in~~~~~~~~~~~~~~~~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT------DFVNPNDHSEPISQVLSKMTN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC------EEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----cCCc------EEEcCCCcchhHHHHHHhhcc
Confidence            4788999986 7788888888888876 78899999988665432    2211      2235444433 2333332222


Q ss_pred             hcCCccEEEcCCcc
Q 023896           83 QFGKLDILTKGDAE   96 (275)
Q Consensus        83 ~~g~id~li~~ag~   96 (275)
                        +.+|+++.+.|.
T Consensus        97 --~G~d~vid~~G~  108 (175)
T d1cdoa2          97 --GGVDFSLECVGN  108 (175)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCcceeeeecCC
Confidence              379999999885

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.15  E-value=0.0054  Score=45.80  Aligned_cols=84  Identities=18%  Similarity=0.195  Sum_probs=52.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHH--hcCCC-----CCceeEEEecccChHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVD-----PELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~--~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ++.|.|. |-+|.++++.|.++|++|++.+|+.+..+...+.-.  .....     ...+.++.  + ..+.+.+.++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila--v-p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC--T-PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC--S-CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc--C-cHhhhhhhhhhh
Confidence            3566666 999999999999999999999999887665443210  00000     00122222  1 245677777877


Q ss_pred             HhhcCCccEEEcCCc
Q 023896           81 KTQFGKLDILTKGDA   95 (275)
Q Consensus        81 ~~~~g~id~li~~ag   95 (275)
                      .....+=.+++..++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766555556666544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.05  E-value=0.021  Score=43.04  Aligned_cols=87  Identities=11%  Similarity=0.063  Sum_probs=57.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCC------------CCCceeEEEecccChHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV------------DPELLLFHQLDISDLASVSS   75 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~------------~~~~~~~~~~Dl~~~~~v~~   75 (275)
                      .+-|.|- |-+|..+++.|+++|++|++.+|++++.+.+.+.-.....            .......+...+.+.+.+..
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            4556666 8999999999999999999999999988776442110000            00012334455666777777


Q ss_pred             HHHHHHhhcCCccEEEcCCc
Q 023896           76 LADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        76 ~~~~~~~~~g~id~li~~ag   95 (275)
                      ..+.+.....+=+++|....
T Consensus        83 v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhccccCcEEEecCc
Confidence            77777666555566666553

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.99  E-value=0.017  Score=42.63  Aligned_cols=116  Identities=14%  Similarity=0.112  Sum_probs=62.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEecChh--HHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~-------~vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      .+|.|+||+|.+|.+++..|+..+.       .+++.+.+..  .++....++.......  ..  .....+.+.  +  
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~--~~--~~~~~~~~~--~--   75 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATDKEE--I--   75 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEESCHH--H--
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccc--cc--ccccCcccc--c--
Confidence            4689999999999999999986532       3556655443  3344333443322211  11  122222221  1  


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhc-CCC-CeEEEEec
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDS-PRLVNLSS  145 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~-g~iv~vsS  145 (275)
                           .+...|++|..+|.....   .++.++   .+..|.    .+++.+.+.+.+ .+. +.++.+|-
T Consensus        76 -----~~~~~dvVVitag~~~~~---g~sr~d---ll~~N~----~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          76 -----AFKDLDVAILVGSMPRRD---GMERKD---LLKANV----KIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             -----HTTTCSEEEECCSCCCCT---TCCTTT---THHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -----ccCCceEEEEecccCCCC---CCchhH---HHHHhH----HHHHHHHHHHHhhCCCceEEEEecC
Confidence                 123789999999875432   223333   345554    455555555543 233 34555554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.97  E-value=0.0051  Score=43.05  Aligned_cols=39  Identities=13%  Similarity=0.194  Sum_probs=34.6

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+++||++||.|+ |.+|..-++.|++.|++|++.+....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3678999999999 67999999999999999999887664

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.95  E-value=0.061  Score=38.99  Aligned_cols=114  Identities=8%  Similarity=-0.012  Sum_probs=66.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHHhcC-CCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ++.|.|+ |.+|..++..|+.+|.  ++++.+++++.++..+.++++.. ...........  .+.++           +
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH-----------h
Confidence            4667786 9999999999998874  79999999988776666665321 00011222221  11111           1


Q ss_pred             CCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcC-CCCeEEEEec
Q 023896           85 GKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSS  145 (275)
Q Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vsS  145 (275)
                      ..-|++|..+|.....+   .+   ..+.+..|.-    +++.+.+.+.+. +.+.++++|-
T Consensus        68 ~~adiVvitag~~~~~g---~~---r~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPG---MT---RLDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             TTCSEEEECCCCCCCSS---CC---HHHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             ccccEEEEeccccCCCC---Cc---hHHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecC
Confidence            26799999998644321   12   3334444443    444455544443 4456666655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.86  E-value=0.0053  Score=47.06  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=38.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~   51 (275)
                      |+|.|.|+ |-+|..+|..++.+|++|++.+++++.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888898 889999999999999999999999988777665543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.69  E-value=0.013  Score=45.48  Aligned_cols=44  Identities=18%  Similarity=0.195  Sum_probs=38.4

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      .+++||+|+|-| -|.+|..+++.|.+.|++|++.+.+.......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            468899999998 58899999999999999999999988765543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.53  E-value=0.0073  Score=47.90  Aligned_cols=48  Identities=17%  Similarity=0.165  Sum_probs=41.0

Q ss_pred             cccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         2 ~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      .+++||+|+|-|- |.+|..+++.|.+.|++|+.++.+.........+.
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            3578999999886 89999999999999999999999988776665543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.41  E-value=0.025  Score=39.38  Aligned_cols=71  Identities=14%  Similarity=0.183  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ...++.|.|| |.+|+-++....+.|+++++.+.+...-..   .+     .   -..+..|+.|.+.+.+++.+.    
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~v-----a---~~~i~~~~~d~~~l~~~~~~~----   73 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---HV-----A---HRSHVINMLDGDALRRVVELE----   73 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---GG-----S---SEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh---hc-----C---CeEEECCCCCHHHHHHHHHhh----
Confidence            3467999995 899999999999999999999987753111   00     0   346778999999988888755    


Q ss_pred             CCccEEEc
Q 023896           85 GKLDILTK   92 (275)
Q Consensus        85 g~id~li~   92 (275)
                       .+|++..
T Consensus        74 -~~DviT~   80 (111)
T d1kjqa2          74 -KPHYIVP   80 (111)
T ss_dssp             -CCSEEEE
T ss_pred             -CCceEEE
Confidence             6788865

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.30  E-value=0.0082  Score=44.13  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=32.2

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecC
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      +++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            468999999999 679999999999999999998643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.14  E-value=0.01  Score=43.87  Aligned_cols=34  Identities=21%  Similarity=0.123  Sum_probs=31.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      +++|.|+ |.||..++..|++.|++|.+++|+...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5889998 999999999999999999999998864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.10  E-value=0.015  Score=45.64  Aligned_cols=39  Identities=38%  Similarity=0.451  Sum_probs=33.1

Q ss_pred             CcccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         1 m~~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      ||.-+.|+|+|.|| |-.|..+|..|+++|++|++++|+.
T Consensus         1 ~~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           1 LMMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            44455677888988 8899999999999999999999864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.94  E-value=0.015  Score=44.59  Aligned_cols=38  Identities=26%  Similarity=0.146  Sum_probs=32.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      ++.|.|| |..|.+++..|++.|++|.+.+|+++..+..
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            5788887 7799999999999999999999998765544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.86  E-value=0.068  Score=39.34  Aligned_cols=39  Identities=15%  Similarity=0.238  Sum_probs=32.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~   48 (275)
                      +-|.|- |-+|..+|+.|+++|++|++.+|++++.+...+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            445554 999999999999999999999999988766543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.83  E-value=0.13  Score=38.17  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      .-+|+|.|+ |--|.+.++.....|+.|.+.+.+..+++.........      +.   .-.++++.+.+.++       
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~------~~---~~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------VE---LLYSNSAEIETAVA-------   94 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------SE---EEECCHHHHHHHHH-------
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc------ce---eehhhhhhHHHhhc-------
Confidence            457888888 78899999999999999999999999887765544322      22   22455555555444       


Q ss_pred             CccEEEcCCcccc
Q 023896           86 KLDILTKGDAEVD   98 (275)
Q Consensus        86 ~id~li~~ag~~~   98 (275)
                      .-|++|..+-+..
T Consensus        95 ~aDivI~aalipG  107 (168)
T d1pjca1          95 EADLLIGAVLVPG  107 (168)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             cCcEEEEeeecCC
Confidence            6799999885543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.035  Score=41.32  Aligned_cols=39  Identities=28%  Similarity=0.315  Sum_probs=35.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      .+.||+++|.|- |-||+.+|+.|...|++|++++.++-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            357999999987 689999999999999999999999854

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.73  E-value=0.29  Score=35.80  Aligned_cols=87  Identities=13%  Similarity=0.030  Sum_probs=51.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEecChhHHHHHHHHHH-hc-CCCC-----CceeEEEecccChHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLK-AS-GVDP-----ELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~~~~~~~~~~l~-~~-~~~~-----~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      .++|.|. |-||.++++.|.+.|+  +|+..+|+++..+.+.+.-. .. ....     .....+.+ ..-.+.+.+.++
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl~   80 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIAK   80 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhhh
Confidence            4788875 9999999999999986  78889999887666543210 00 0000     00111111 122455667777


Q ss_pred             HHHhhcCCccEEEcCCcc
Q 023896           79 FIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~   96 (275)
                      ++.....+=.+++..++.
T Consensus        81 ~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          81 KLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHSCTTCEEEECCSC
T ss_pred             hhhccccccccccccccc
Confidence            776655544555555543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.83  E-value=0.061  Score=39.68  Aligned_cols=38  Identities=11%  Similarity=-0.031  Sum_probs=31.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      |-|. |.|-+|.++|++|+++|++|.+.+|+.++.+...
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4445 4599999999999999999999999998766553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.80  E-value=0.047  Score=38.44  Aligned_cols=35  Identities=29%  Similarity=0.316  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +.|+++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888877 8999999999999999999998765

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.73  E-value=0.075  Score=40.16  Aligned_cols=40  Identities=15%  Similarity=0.133  Sum_probs=34.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~   47 (275)
                      -.|+|.|| |-.|.+.++-...-|+.|.+.+.+..++++..
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            46888887 78899999999999999999999998766654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.60  E-value=0.1  Score=41.13  Aligned_cols=37  Identities=24%  Similarity=0.404  Sum_probs=31.4

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .+++++|+|.|+ ||+|..++..|+..|- +++++|.|.
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            356789999996 8999999999999998 788887543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.57  E-value=0.051  Score=38.18  Aligned_cols=36  Identities=19%  Similarity=0.359  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+|+++|.|| |.+|.++|..|++.|.+|.++.+..+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3578888887 89999999999999999999988663

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.53  E-value=0.058  Score=39.44  Aligned_cols=41  Identities=12%  Similarity=0.182  Sum_probs=33.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      +.|- |.|-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4445 4599999999999999999999999998877765544

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.51  E-value=0.069  Score=38.92  Aligned_cols=40  Identities=10%  Similarity=0.202  Sum_probs=33.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CEEEEEecChhHHHHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g-~~vi~~~r~~~~~~~~~~~   49 (275)
                      +.+-|+ |-+|.++++.|++.| ++|++++|++++.+...++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            556666 999999999999887 8999999999887776554

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.49  E-value=1.1  Score=36.28  Aligned_cols=81  Identities=14%  Similarity=0.044  Sum_probs=53.5

Q ss_pred             CCCEEE-EecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAV-VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vl-ItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ++++|| +..++|+++.+    ++..|++|+.++.+...++.+.+.+...+....++.+++.|+.      +++++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            467777 44555655554    4557899999999999888887765544333334778776654      334444444


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                      -.++|+||++.-
T Consensus       202 ~~~fD~IilDPP  213 (309)
T d2igta1         202 GSTYDIILTDPP  213 (309)
T ss_dssp             TCCBSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            458999999853

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.39  E-value=0.044  Score=41.04  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=32.2

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHH
Q 023896           14 SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (275)
Q Consensus        14 a~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~   49 (275)
                      |.|-+|.+++++|+++|++|.+.+|++++.+.+.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            558999999999999999999999999988777654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.36  E-value=0.26  Score=38.38  Aligned_cols=75  Identities=19%  Similarity=0.087  Sum_probs=56.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..+++||=.|++.|.   ++..|+++|.+|+.++.++.-++.+.+.....+.+   +.++..|+.+..           .
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~---v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLK---PRLACQDISNLN-----------I   98 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCC---CEEECCCGGGCC-----------C
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCcc---ceeeccchhhhc-----------c
Confidence            346889999998885   77788999999999999998877776666554433   788888887643           1


Q ss_pred             cCCccEEEcCCc
Q 023896           84 FGKLDILTKGDA   95 (275)
Q Consensus        84 ~g~id~li~~ag   95 (275)
                      .+++|++++..+
T Consensus        99 ~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 NRKFDLITCCLD  110 (246)
T ss_dssp             SCCEEEEEECTT
T ss_pred             cccccccceeee
Confidence            147999887543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.35  E-value=0.68  Score=37.81  Aligned_cols=119  Identities=8%  Similarity=0.068  Sum_probs=69.5

Q ss_pred             CCCEEE-EecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAV-VTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vl-ItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .|++|| +..++||++.+    ++..|+ .|+.++.+...++...+.+...+....++.+++.|+-      +.++....
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            578887 44555666544    344676 6999999999888887776654443344788887764      23344444


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEec
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  145 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  145 (275)
                      +..+.|++|...-......-   .....       ......|++.+++.++  ++|.+++.|.
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~---~~~~~-------~~~~~~L~~~a~~ll~--pgG~l~~~sc  264 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKK---EVFSV-------SKDYHKLIRQGLEILS--ENGLIIASTN  264 (317)
T ss_dssp             TTCCEEEEEECCCCC--------CCCCH-------HHHHHHHHHHHHHTEE--EEEEEEEEEC
T ss_pred             hcCCCCEEEEcChhhccchh---HHHHH-------HHHHHHHHHHHHHHcC--CCCEEEEEeC
Confidence            44589999998532221110   00011       1123446677777764  4466666555

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.29  E-value=0.087  Score=38.97  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=35.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      .+.||+++|.|= |-+|+.+|.+|...|++|+++..|+-+
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            357999999998 889999999999999999999999965

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.24  E-value=0.13  Score=35.69  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .|+++|.|| |.+|.++|..|+..|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            477888887 8999999999999999999999754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.13  E-value=0.053  Score=46.81  Aligned_cols=35  Identities=26%  Similarity=0.440  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      ++.+|||.|+ ||||.++++.|+..|. ++.+++.+.
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            4668999999 7899999999999998 788887543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.13  E-value=0.06  Score=37.34  Aligned_cols=35  Identities=29%  Similarity=0.267  Sum_probs=31.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|..+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378888888 89999999999999999999987663

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.06  E-value=0.31  Score=37.09  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             ccCCCEEEEecCCCc-hhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKG-IGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa~~g-IG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      +++|++||=.|++.| +|.    .++..|+ +|+.++.++..++.+.+.+...+..   ..++..|+...          
T Consensus        44 dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~---~~~~~~d~~~~----------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGK---FKVFIGDVSEF----------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS---EEEEESCGGGC----------
T ss_pred             CCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCC---ceEEECchhhh----------
Confidence            467899997777655 443    3456675 8999999998888777766554432   67777776542          


Q ss_pred             HhhcCCccEEEcCCcc
Q 023896           81 KTQFGKLDILTKGDAE   96 (275)
Q Consensus        81 ~~~~g~id~li~~ag~   96 (275)
                         .+++|++|.|.-.
T Consensus       107 ---~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPF  119 (201)
T ss_dssp             ---CCCCSEEEECCCC
T ss_pred             ---CCcCcEEEEcCcc
Confidence               2489999998754

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.91  E-value=0.16  Score=38.76  Aligned_cols=70  Identities=19%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      +++||+||=.|++.|+   ++..++..|+ +|+.++.++...+.+.+.+       ..+.++..|+.+.+          
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-------~~~~~~~~D~~~l~----------  105 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-------GGVNFMVADVSEIS----------  105 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-------TTSEEEECCGGGCC----------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-------ccccEEEEehhhcC----------
Confidence            5689999999988773   3344666775 6999999988766554432       12678888886432          


Q ss_pred             hhcCCccEEEcCCc
Q 023896           82 TQFGKLDILTKGDA   95 (275)
Q Consensus        82 ~~~g~id~li~~ag   95 (275)
                         +++|++|.|.-
T Consensus       106 ---~~fD~Vi~NPP  116 (197)
T d1ne2a_         106 ---GKYDTWIMNPP  116 (197)
T ss_dssp             ---CCEEEEEECCC
T ss_pred             ---CcceEEEeCcc
Confidence               58999999864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.84  E-value=0.33  Score=34.23  Aligned_cols=74  Identities=16%  Similarity=0.154  Sum_probs=54.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEE-ecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      ++.|.|++|-.|+++++.+.+++++++.. +++...         ... .   .. +..|++.++.+.+.++.+.+.  +
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~---------~~~-~---~D-VvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE---------ELD-S---PD-VVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE---------ECS-C---CS-EEEECSCGGGHHHHHHHHHHH--T
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH---------Hhc-c---CC-EEEEecCHHHHHHHHHHHHhc--C
Confidence            58999999999999999999999987754 443321         011 1   11 457999999999999888766  5


Q ss_pred             ccEEEcCCccc
Q 023896           87 LDILTKGDAEV   97 (275)
Q Consensus        87 id~li~~ag~~   97 (275)
                      +-+|+-..|..
T Consensus        66 ~p~ViGTTG~~   76 (128)
T d1vm6a3          66 AGLVLGTTALK   76 (128)
T ss_dssp             CEEEECCCSCC
T ss_pred             CCEEEEcCCCC
Confidence            66777777753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.84  E-value=0.79  Score=37.39  Aligned_cols=119  Identities=17%  Similarity=0.092  Sum_probs=70.4

Q ss_pred             cCCCEEEEecC-CCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa-~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+|++||=.++ +|+++.++    +..+.+|+.++.+...++.+.+.+...+-.  .+.++..|..+..      +.+..
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~--~~~~i~~d~~~~~------~~~~~  211 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLG--NVRVLEANAFDLL------RRLEK  211 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCT--TEEEEESCHHHHH------HHHHH
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCC--CcceeeccHHHHh------hhhHh
Confidence            46788885554 56665544    344678999999999988888777655433  2777777765422      23333


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecC
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  146 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  146 (275)
                      .-.++|.|+.+........      +.....    ......+++.+...++  ++|.+++.|..
T Consensus       212 ~~~~fD~Vi~DpP~~~~~~------~~~~~~----~~~~~~l~~~a~~lLk--pGG~Lv~~scs  263 (318)
T d1wxxa2         212 EGERFDLVVLDPPAFAKGK------KDVERA----YRAYKEVNLRAIKLLK--EGGILATASCS  263 (318)
T ss_dssp             TTCCEEEEEECCCCSCCST------TSHHHH----HHHHHHHHHHHHHTEE--EEEEEEEEECC
T ss_pred             hhcCCCEEEEcCCccccch------HHHHHH----HHHHHHHHHHHHHHcC--CCCEEEEEeCC
Confidence            3358999999864332211      111111    1123346666666664  45777776653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.71  E-value=0.067  Score=37.48  Aligned_cols=34  Identities=32%  Similarity=0.399  Sum_probs=30.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +|.++|.|| |.+|.++|..|++.|++|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888887 8999999999999999999998765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.58  E-value=0.072  Score=37.51  Aligned_cols=34  Identities=24%  Similarity=0.295  Sum_probs=30.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            377888888 6899999999999999999999864

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.54  E-value=0.55  Score=32.19  Aligned_cols=81  Identities=11%  Similarity=0.015  Sum_probs=56.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChH-HHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA-SVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   84 (275)
                      ||+|||.--..-+-..+...|-+.|++|+..+.+...+-...+   +..     ...+-+|+.-++ +=-.+++++++..
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~---~~~-----~dliilD~~mp~~~G~e~~~~ir~~~   72 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYK---ELK-----PDIVTMDITMPEMNGIDAIKEIMKID   72 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHC-----CSEEEEECSCGGGCHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHH---hcc-----CCEEEEecCCCCCCHHHHHHHHHHhC
Confidence            7899999999999999999999999999877777655444333   222     445556666544 3345667777777


Q ss_pred             CCccEEEcCC
Q 023896           85 GKLDILTKGD   94 (275)
Q Consensus        85 g~id~li~~a   94 (275)
                      +.+-+++..+
T Consensus        73 ~~~pvi~ls~   82 (118)
T d1u0sy_          73 PNAKIIVCSA   82 (118)
T ss_dssp             TTCCEEEEEC
T ss_pred             CCCcEEEEEc
Confidence            7777776643

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.52  E-value=0.076  Score=36.83  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=30.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      |+++|.|| |.+|.++|..|++.|++|.++.|..+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67888877 89999999999999999999988653

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.46  E-value=1.2  Score=36.32  Aligned_cols=120  Identities=16%  Similarity=0.061  Sum_probs=71.0

Q ss_pred             CCCEEEEecC-CCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            5 TKKYAVVTGS-NKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         5 ~~k~vlItGa-~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .|++||=.++ +|+++..+    +..|+ +|+.++.++..++.+.+.+...+-. .++.++..|+.+      ....+..
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~-~~~~~~~~d~~~------~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVE-DRMKFIVGSAFE------EMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHH------HHHHHHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCC-ccceeeechhhh------hhHHHHh
Confidence            3778886655 45555544    45566 7999999999888887766654432 236677766542      2233333


Q ss_pred             hcCCccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEecCc
Q 023896           83 QFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYV  147 (275)
Q Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~  147 (275)
                      .-.++|++|.+.......      .+.....    ......+++.+++.++  ++|.+++.|...
T Consensus       214 ~~~~fD~Vi~DpP~~~~~------~~~~~~~----~~~y~~l~~~a~~ll~--pGG~lv~~s~s~  266 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFVQH------EKDLKAG----LRAYFNVNFAGLNLVK--DGGILVTCSCSQ  266 (324)
T ss_dssp             TTCCEEEEEECCCCSCSS------GGGHHHH----HHHHHHHHHHHHTTEE--EEEEEEEEECCT
T ss_pred             ccCCCCchhcCCccccCC------HHHHHHH----HHHHHHHHHHHHHHcC--CCcEEEEEeCCc
Confidence            435899999986433221      1111111    1133456677777764  457777776543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.46  E-value=0.084  Score=39.66  Aligned_cols=42  Identities=17%  Similarity=0.236  Sum_probs=32.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA   52 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~   52 (275)
                      .+.|.|+ |..|.++|..|++.|++|.+.+|+...  +..+.++.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            4677887 899999999999999999999996543  23344543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.43  E-value=0.12  Score=38.33  Aligned_cols=38  Identities=26%  Similarity=0.232  Sum_probs=33.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +++||.++|.|-+.-+|+-++..|..+|++|+++.+..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            46899999999999999999999999999998776433

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.42  E-value=0.078  Score=37.17  Aligned_cols=34  Identities=21%  Similarity=0.200  Sum_probs=30.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      -|+++|.|| |-||.++|..|++.|++|.++.|..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            367888887 8999999999999999999998765

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.42  E-value=0.63  Score=35.95  Aligned_cols=74  Identities=22%  Similarity=0.158  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ..+++|=.|++.|   .++..|+++|++|+.++-++.-++.+.+.....+.+   +.+++.|+.+..-         +  
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~---i~~~~~d~~~l~~---------~--  103 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK---IEFLQGDVLEIAF---------K--  103 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---CEEEESCGGGCCC---------C--
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccccc---chheehhhhhccc---------c--
Confidence            3578999998876   456678899999999999998877777666654433   8888888876431         1  


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ..+|.+++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            37898887543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.37  E-value=0.06  Score=40.36  Aligned_cols=36  Identities=14%  Similarity=0.159  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~   41 (275)
                      .+|+|+|.|| |-.|..+|..|+++|+ .|+++.|...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            4788999998 8999999999999998 5989887654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.37  E-value=0.11  Score=35.97  Aligned_cols=35  Identities=23%  Similarity=0.229  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .+|.++|.|| |-||.++|..|+..|.+|.++.|..
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4688998887 8999999999999999999998765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.32  E-value=0.091  Score=39.59  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=32.7

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+.|+|+|.|| |--|.+.|..|+++|++|++..++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            35789999998 78999999999999999999998653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.29  E-value=0.57  Score=35.84  Aligned_cols=81  Identities=14%  Similarity=0.076  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .|.+||-.|+++|--.++..++.....+|+.++.+++..+.+.+.+......+  +.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n--~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN--VIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccc--cccccCchHHcc----------ccc
Confidence            46789999998887777666666666789999999998888888777654443  666666655421          112


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                      +++|.++.+++..
T Consensus       143 ~~fD~I~~~~~~~  155 (213)
T d1dl5a1         143 SPYDVIFVTVGVD  155 (213)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             cchhhhhhhccHH
Confidence            4799999987653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.26  E-value=0.45  Score=31.62  Aligned_cols=73  Identities=12%  Similarity=0.065  Sum_probs=45.8

Q ss_pred             CCCEEEEecCCCchhHH-HHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVTGSNKGIGFE-TVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~-~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +.|++.+.|- +|+|.+ +|+.|.++|+.|...|+.....-   +.+.+.+     +.+...+-  .+.           
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~G-----i~v~~g~~--~~~-----------   64 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAG-----AKIYIGHA--EEH-----------   64 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTT-----CEEEESCC--GGG-----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCC-----CeEEECCc--ccc-----------
Confidence            3477777776 778854 69999999999999998754322   3344433     33332111  111           


Q ss_pred             cCCccEEEcCCccccc
Q 023896           84 FGKLDILTKGDAEVDW   99 (275)
Q Consensus        84 ~g~id~li~~ag~~~~   99 (275)
                      ....|.+|...++...
T Consensus        65 i~~~d~vV~S~AI~~~   80 (96)
T d1p3da1          65 IEGASVVVVSSAIKDD   80 (96)
T ss_dssp             GTTCSEEEECTTSCTT
T ss_pred             CCCCCEEEECCCcCCC
Confidence            1267999998876543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.22  E-value=0.72  Score=33.63  Aligned_cols=76  Identities=16%  Similarity=-0.014  Sum_probs=41.4

Q ss_pred             EEEEecCCCchhHHHHHH-HHHC-----CCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFETVRQ-LASK-----GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~-l~~~-----g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      ++.|.||++ +|..++.. |+..     ..++++.+.++++++.............  ...   ..+...  .+   .+ 
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~--~~~---~~t~~~--~~---~l-   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDR--FKV---LISDTF--EG---AV-   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTS--SEE---EECSSH--HH---HH-
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccC--ceE---EEecCc--cc---cc-
Confidence            467888744 67665533 2221     3589999999998775443322211111  111   122211  11   22 


Q ss_pred             hhcCCccEEEcCCcccc
Q 023896           82 TQFGKLDILTKGDAEVD   98 (275)
Q Consensus        82 ~~~g~id~li~~ag~~~   98 (275)
                         ..-|++|..+|...
T Consensus        70 ---~~aDvVVita~~~~   83 (162)
T d1up7a1          70 ---VDAKYVIFQFRPGG   83 (162)
T ss_dssp             ---TTCSEEEECCCTTH
T ss_pred             ---CCCCEEEEecccCC
Confidence               26799999998643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.00  E-value=0.1  Score=36.29  Aligned_cols=34  Identities=24%  Similarity=0.157  Sum_probs=30.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            477888988 8999999999999999999998755

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.11  Score=38.83  Aligned_cols=38  Identities=24%  Similarity=0.175  Sum_probs=34.1

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +++||.++|.|.+.-+|+-++.-|+.+|++|.++.+..
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            46899999999999999999999999999999887544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.91  E-value=0.08  Score=37.34  Aligned_cols=70  Identities=20%  Similarity=0.227  Sum_probs=48.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCC
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   86 (275)
                      |-++|.|. |.+|..+++.|.  |..|++++.++...+...    ..+     +.++..|.++++.++++      ...+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~~-----~~~i~Gd~~~~~~L~~a------~i~~   62 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RSG-----ANFVHGDPTRVSDLEKA------NVRG   62 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HTT-----CEEEESCTTSHHHHHHT------TCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hcC-----ccccccccCCHHHHHHh------hhhc
Confidence            44778876 789999999984  667888898887755442    222     77888999998765443      1235


Q ss_pred             ccEEEcCC
Q 023896           87 LDILTKGD   94 (275)
Q Consensus        87 id~li~~a   94 (275)
                      -+.+|...
T Consensus        63 A~~vi~~~   70 (129)
T d2fy8a1          63 ARAVIVNL   70 (129)
T ss_dssp             CSEEEECC
T ss_pred             CcEEEEec
Confidence            56666543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.90  E-value=0.074  Score=42.04  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +|+|+|.|| |-=|..+|.+|+++|++|++..++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988 6778999999999999999998754

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.53  E-value=0.2  Score=37.21  Aligned_cols=79  Identities=15%  Similarity=0.045  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCC----------CCceeEEEecccChHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD----------PELLLFHQLDISDLASVS   74 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~----------~~~~~~~~~Dl~~~~~v~   74 (275)
                      .+++||..|++.|   ..+..|+++|++|+.++.++...+.+.+..+.....          .....++..|..+...  
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~--   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA--   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc--
Confidence            5789999999877   477789999999999999999888877666433110          1124566777766543  


Q ss_pred             HHHHHHHhhcCCccEEEcCCc
Q 023896           75 SLADFIKTQFGKLDILTKGDA   95 (275)
Q Consensus        75 ~~~~~~~~~~g~id~li~~ag   95 (275)
                        ...     ...|.++....
T Consensus        95 --~~~-----~~~D~i~~~~~  108 (201)
T d1pjza_          95 --RDI-----GHCAAFYDRAA  108 (201)
T ss_dssp             --HHH-----HSEEEEEEESC
T ss_pred             --ccc-----cceeEEEEEee
Confidence              111     25677766443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.52  E-value=0.27  Score=35.02  Aligned_cols=77  Identities=14%  Similarity=0.171  Sum_probs=52.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEE-EecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGFETVRQLASK-GITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~-g~~vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++.|.|++|-+|+++++.+.+. +++++. +++... .    ..+.....+      +..|++.++.+...++.+.+.  
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~----~~~~~~~~D------vvIDFS~p~~~~~~~~~~~~~--   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L----SLLTDGNTE------VVIDFTHPDVVMGNLEFLIDN--   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T----HHHHTTTCS------EEEECCCTTTHHHHHHHHHHT--
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h----hhhccccCC------EEEEcccHHHHHHHHHHHHhc--
Confidence            5789999999999999987765 566654 343221 1    112222211      568999999999998877765  


Q ss_pred             CccEEEcCCccc
Q 023896           86 KLDILTKGDAEV   97 (275)
Q Consensus        86 ~id~li~~ag~~   97 (275)
                      ++-+++-..|..
T Consensus        68 ~~~~ViGTTG~~   79 (135)
T d1yl7a1          68 GIHAVVGTTGFT   79 (135)
T ss_dssp             TCEEEECCCCCC
T ss_pred             CCCEEEeccccc
Confidence            566777776653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.30  E-value=0.56  Score=36.10  Aligned_cols=79  Identities=14%  Similarity=0.038  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+||..|+++|--.++..+|+  |.+|+.+.+++.-.+...+.+...+..+  +.++..|..+-.          ...
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~n--v~~~~gd~~~g~----------~~~  143 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKN--VHVILGDGSKGF----------PPK  143 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCce--eEEEECccccCC----------ccc
Confidence            46789999999999999888887  4569999999887777777777665443  888888876421          223


Q ss_pred             CCccEEEcCCccc
Q 023896           85 GKLDILTKGDAEV   97 (275)
Q Consensus        85 g~id~li~~ag~~   97 (275)
                      ++.|.++.+++..
T Consensus       144 ~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         144 APYDVIIVTAGAP  156 (215)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             CcceeEEeecccc
Confidence            5899999887764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.22  E-value=0.16  Score=36.81  Aligned_cols=36  Identities=17%  Similarity=0.126  Sum_probs=29.6

Q ss_pred             CCEEEEe-cCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            6 KKYAVVT-GSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         6 ~k~vlIt-Ga~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.++|. .+++.||.++|..|++.|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555555 45689999999999999999999998653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.13  E-value=0.11  Score=35.81  Aligned_cols=34  Identities=26%  Similarity=0.250  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .|+++|.|| |.+|.++|..|.+.|++|.++.|..
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367888876 8999999999999999999998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.03  E-value=0.15  Score=36.26  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+|+++|.|| |.+|.++|..|++.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3678888887 89999999999999999999987653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.01  E-value=0.11  Score=36.27  Aligned_cols=33  Identities=24%  Similarity=0.334  Sum_probs=29.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      ++++|.|| |-||.++|..|.+.|.+|.++.|+.
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            56888887 8999999999999999999998763

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.99  E-value=2.3  Score=31.77  Aligned_cols=28  Identities=14%  Similarity=0.132  Sum_probs=22.9

Q ss_pred             hhHhHHHHHHHHHHHHHhCCCeEEEeec
Q 023896          200 YKVSKAVINAYTRILAKRYPKFCVNCVC  227 (275)
Q Consensus       200 Y~~sK~a~~~~~~~~a~~~~~i~vn~v~  227 (275)
                      -....+++-+|+|.++.|+|+.++.+|.
T Consensus       138 ~~p~~A~l~Gl~r~~~~E~P~l~~~~vD  165 (209)
T d2fr1a2         138 RNAAHGALWGVGRVIALENPAVWGGLVD  165 (209)
T ss_dssp             SCGGGHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred             CCHhHHhHHHHHHHHHHhCCCceEEEEE
Confidence            3567889999999999999987776554

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.85  E-value=0.31  Score=36.95  Aligned_cols=80  Identities=14%  Similarity=0.033  Sum_probs=58.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcCCcc
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   88 (275)
                      +=+|.|+||...++.+.+ . +.+|+.++++++..+...+.+.....   ++.++..++++...+   .+..  ...++|
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~---r~~~~~~~f~~~~~~---~~~~--~~~~vd   97 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSD---RVSLFKVSYREADFL---LKTL--GIEKVD   97 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTT---TEEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccc---cccchhHHHhhHHHH---HHHc--CCCCcc
Confidence            337888899988888876 3 46899999999998888777665433   388999888875432   2211  135899


Q ss_pred             EEEcCCcccc
Q 023896           89 ILTKGDAEVD   98 (275)
Q Consensus        89 ~li~~ag~~~   98 (275)
                      .++..-|++.
T Consensus        98 gIl~DlGvSs  107 (192)
T d1m6ya2          98 GILMDLGVST  107 (192)
T ss_dssp             EEEEECSCCH
T ss_pred             eeeeccchhH
Confidence            9999888743

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.74  E-value=1.3  Score=35.18  Aligned_cols=81  Identities=17%  Similarity=0.223  Sum_probs=53.1

Q ss_pred             CCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~g-IG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .++++-.|+++| |+.+++ +  ...++|+.++.++..++-+.+.....+.. .++.+...|+.+.         ..+.+
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~-~~~~i~~~~~~~~---------~~~~~  177 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVS-DRFFVRKGEFLEP---------FKEKF  177 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCT-TSEEEEESSTTGG---------GGGGT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCC-ceeEEeecccccc---------ccccc
Confidence            345665555555 555544 3  24679999999999888777766554332 3467777777643         22345


Q ss_pred             CCccEEEcCCccccc
Q 023896           85 GKLDILTKGDAEVDW   99 (275)
Q Consensus        85 g~id~li~~ag~~~~   99 (275)
                      +++|++|.|.-+.+.
T Consensus       178 ~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         178 ASIEMILSNPPYVKS  192 (271)
T ss_dssp             TTCCEEEECCCCBCG
T ss_pred             CcccEEEEcccccCc
Confidence            789999999876543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.73  E-value=0.14  Score=39.92  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=31.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      ...++|+|.|| |--|..+|..|+++|++|++..|+.
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35678999998 7889999999999999999999864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.56  E-value=0.23  Score=37.83  Aligned_cols=37  Identities=11%  Similarity=-0.020  Sum_probs=31.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +.|. |.|-+|..+|..|+++|++|+..+.|.++.+..
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            5566 459999999999999999999999998765443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.41  E-value=0.2  Score=37.70  Aligned_cols=38  Identities=26%  Similarity=0.178  Sum_probs=33.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+.||++.|.|. |.||+.+++.+...|++|+..+|+..
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            368999999998 66999999999999999999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.35  E-value=0.18  Score=36.52  Aligned_cols=37  Identities=16%  Similarity=0.174  Sum_probs=29.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHH
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~   46 (275)
                      +-|.| .|-+|.++++.|+++|++|+..+++..+....
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            44554 59999999999999999999998877655443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=90.27  E-value=0.19  Score=38.30  Aligned_cols=38  Identities=18%  Similarity=0.163  Sum_probs=33.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.||++.|.|- |.||+.+++.|...|++|+..++...
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            467999999997 89999999999999999999987654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.22  E-value=0.38  Score=35.56  Aligned_cols=118  Identities=14%  Similarity=0.085  Sum_probs=60.8

Q ss_pred             CEEEEecCCCchhHH-HHHHHHHC-----CCEEEEEecChhHHHHHHHHHHh---cCCCCCceeEEEecccChHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFE-TVRQLASK-----GITVVLTARDEKRGLEAVEKLKA---SGVDPELLLFHQLDISDLASVSSLA   77 (275)
Q Consensus         7 k~vlItGa~~gIG~~-~a~~l~~~-----g~~vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~~Dl~~~~~v~~~~   77 (275)
                      ..+.|.||++ .|.. ++..++.+     +.+|++.+.++++++...+.+..   .....  .....  .+|   ..+.+
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~d---~~eal   75 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD--IEFAA--TTD---PEEAF   75 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTT--SEEEE--ESC---HHHHH
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCC--cceEe--cCC---hhhcc
Confidence            3466667754 4543 44444432     24899999999988755544432   11111  22211  112   12222


Q ss_pred             HHHHhhcCCccEEEcCCcccccchhhccchhHHHHhHHhhc----------------ccHHHHHHHHhhhhhc-CCCCeE
Q 023896           78 DFIKTQFGKLDILTKGDAEVDWSKVCYQTYELAVECLKTNY----------------YGTKQTCEALIPLLEL-SDSPRL  140 (275)
Q Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~----------------~~~~~l~~~~~~~~~~-~~~g~i  140 (275)
                             ..-|++|+.+|......      ..-++.+..|+                +-+..+++.+.+.+.+ .+.+-+
T Consensus        76 -------~~AD~Vvitag~~~~~g------~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~l  142 (167)
T d1u8xx1          76 -------TDVDFVMAHIRVGKYAM------RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM  142 (167)
T ss_dssp             -------SSCSEEEECCCTTHHHH------HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             -------CCCCEEEECCCcCCCCc------eeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEE
Confidence                   36899999998754321      12223333332                1234455555555543 455677


Q ss_pred             EEEec
Q 023896          141 VNLSS  145 (275)
Q Consensus       141 v~vsS  145 (275)
                      +++|-
T Consensus       143 i~~TN  147 (167)
T d1u8xx1         143 LNYSN  147 (167)
T ss_dssp             EECCS
T ss_pred             EEeCC
Confidence            77776

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.08  E-value=0.14  Score=35.85  Aligned_cols=35  Identities=26%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|+..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            467888887 89999999999999999999988663

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.03  E-value=0.17  Score=38.60  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=33.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.+|++.|.|. |.||+.+++.|...|++|+..++...
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            467899999987 89999999999999999999997653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=89.97  E-value=0.18  Score=38.41  Aligned_cols=38  Identities=11%  Similarity=0.067  Sum_probs=34.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.||++.|.|. |.||+.+++.|...|++|+..++...
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            467999999987 89999999999999999999998654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.85  E-value=1  Score=35.44  Aligned_cols=73  Identities=18%  Similarity=0.172  Sum_probs=51.0

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      ..|++||=.|+++|+   ++..+++.|++|+.++.++...+.+.+.....+.+   ..++..|+.+          . -.
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~---~~~~~~d~~~----------~-~~  181 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR---PRFLEGSLEA----------A-LP  181 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC---CEEEESCHHH----------H-GG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCc---eeEEeccccc----------c-cc
Confidence            367899999998886   33456677999999999999888877766554433   5556655421          1 11


Q ss_pred             cCCccEEEcC
Q 023896           84 FGKLDILTKG   93 (275)
Q Consensus        84 ~g~id~li~~   93 (275)
                      .++.|+++.|
T Consensus       182 ~~~fD~V~an  191 (254)
T d2nxca1         182 FGPFDLLVAN  191 (254)
T ss_dssp             GCCEEEEEEE
T ss_pred             ccccchhhhc
Confidence            2589999876

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.55  E-value=0.25  Score=36.80  Aligned_cols=38  Identities=21%  Similarity=0.188  Sum_probs=34.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +++||.++|.|-|.=+|+-++..|+.+|+.|.++.++.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            57899999999999999999999999999999887553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.40  E-value=0.3  Score=36.71  Aligned_cols=39  Identities=26%  Similarity=0.136  Sum_probs=33.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      ++.+|++.|.|. |.||+++++.+...|++|+..++....
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            357899998885 999999999999999999999987654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.39  E-value=1.9  Score=31.75  Aligned_cols=77  Identities=18%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+||=.|++.|   .++..|+..+.+|+.++.++..++.+.+.+...+-. .++.+++.|..+          .....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~-~~v~~~~gda~~----------~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG-DNVTLMEGDAPE----------ALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-TTEEEEESCHHH----------HHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCC-cceEEEECchhh----------ccccc
Confidence            4677886777655   333455667779999999999988888877765432 238888877421          22233


Q ss_pred             CCccEEEcCCc
Q 023896           85 GKLDILTKGDA   95 (275)
Q Consensus        85 g~id~li~~ag   95 (275)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899987753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.38  E-value=0.2  Score=36.41  Aligned_cols=35  Identities=17%  Similarity=0.178  Sum_probs=29.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEecCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDE   40 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~--~vi~~~r~~   40 (275)
                      .||+|+|.|| |..|.++|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 7889999999999875  788887655

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.83  Score=36.88  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=50.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .++|+||-.|++.|+   ++..+++.|+ +|+.++.++... .+.+.....+ ...++.++..|+.+...          
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~-~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNK-LEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTT-CTTTEEEEESCTTTSCC----------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhC-CCccceEEEeeHHHhcC----------
Confidence            578999999998876   5566777886 799999887643 3333333332 22348888888776531          


Q ss_pred             hcCCccEEEcC
Q 023896           83 QFGKLDILTKG   93 (275)
Q Consensus        83 ~~g~id~li~~   93 (275)
                      ...++|+++..
T Consensus        99 ~~~~~D~Ivse  109 (311)
T d2fyta1          99 PVEKVDVIISE  109 (311)
T ss_dssp             SCSCEEEEEEC
T ss_pred             ccccceEEEEe
Confidence            11479999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.92  E-value=0.23  Score=38.45  Aligned_cols=36  Identities=36%  Similarity=0.443  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+|+|+|.|| |--|...|..|+++|++|+++.++..
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            5689999998 77899999999999999999987553

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.46  E-value=0.38  Score=36.14  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=33.6

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.++++.|.|. |.||+++++.|...|++|+..++...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            467899999986 89999999999999999999998654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.39  E-value=2.4  Score=30.07  Aligned_cols=78  Identities=13%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             ccCCCEEEEecC-CCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAVVTGS-NKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vlItGa-~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      .++|++||=.|+ +|.+|.+    .+++|+ +|+.++.+....+...+.+...+. ..++.+++.|..+      +++  
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~-~~~~~ii~~D~~~------~l~--   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-ENRFTLLKMEAER------AID--   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-GGGEEEECSCHHH------HHH--
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhccc-ccchhhhcccccc------ccc--
Confidence            357888885555 5556654    456776 799999999888777776654432 3448888877542      222  


Q ss_pred             HhhcCCccEEEcCC
Q 023896           81 KTQFGKLDILTKGD   94 (275)
Q Consensus        81 ~~~~g~id~li~~a   94 (275)
                       ....+.|+++.+.
T Consensus        79 -~~~~~fDiIf~DP   91 (152)
T d2esra1          79 -CLTGRFDLVFLDP   91 (152)
T ss_dssp             -HBCSCEEEEEECC
T ss_pred             -ccccccceeEech
Confidence             2235789998874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.33  E-value=0.42  Score=36.82  Aligned_cols=43  Identities=16%  Similarity=0.046  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l   50 (275)
                      .+++||.-|++.|   ..+..|++.|++|+.++-++...+.+.+..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5679999999877   568889999999999999998877665543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.42  Score=33.59  Aligned_cols=81  Identities=12%  Similarity=0.116  Sum_probs=51.7

Q ss_pred             CcccC-CCEEEEecCCC----------chhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccC
Q 023896            1 MAEAT-KKYAVVTGSNK----------GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD   69 (275)
Q Consensus         1 m~~~~-~k~vlItGa~~----------gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   69 (275)
                      |+... .|.|||.|++.          --+.+.++.|.+.|++++++..|+.....       ...-..++.+.+   -.
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst-------d~d~aD~lYfeP---lt   70 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT-------DPEMADATYIEP---IH   70 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG-------CGGGSSEEECSC---CC
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc-------Chhhcceeeeec---CC
Confidence            44443 48899999852          34667888899999999999999864221       111111233333   23


Q ss_pred             hHHHHHHHHHHHhhcCCccEEEcCCcc
Q 023896           70 LASVSSLADFIKTQFGKLDILTKGDAE   96 (275)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~ag~   96 (275)
                      .+.+.++++.-     ++|.++..-|.
T Consensus        71 ~e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          71 WEVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHHh-----CcCCeEEEeee
Confidence            56666666643     78888877654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.32  E-value=0.2  Score=39.49  Aligned_cols=31  Identities=29%  Similarity=0.238  Sum_probs=28.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 8999999999999999999999865

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.27  E-value=0.25  Score=40.34  Aligned_cols=36  Identities=28%  Similarity=0.306  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++|.++|.|| |--|..+|..|+++|++|++..++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999998 67788999999999999999987664

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.11  E-value=0.58  Score=30.61  Aligned_cols=70  Identities=20%  Similarity=0.187  Sum_probs=44.5

Q ss_pred             EEEEecCCCchhH-HHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEE-ecccChHHHHHHHHHHHhhcC
Q 023896            8 YAVVTGSNKGIGF-ETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ-LDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         8 ~vlItGa~~gIG~-~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      ++-+.|- +|+|+ ++|+.|.++|+.|...|+.....   .+.|+..+..     +.. -|..+              ..
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~Gi~-----i~~gh~~~~--------------i~   59 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKLGIP-----IFVPHSADN--------------WY   59 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTTCC-----EESSCCTTS--------------CC
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHCCCe-----EEeeecccc--------------cC
Confidence            4555554 88998 58999999999999999876432   2345555422     221 12111              13


Q ss_pred             CccEEEcCCcccccc
Q 023896           86 KLDILTKGDAEVDWS  100 (275)
Q Consensus        86 ~id~li~~ag~~~~~  100 (275)
                      ..|.+|...++....
T Consensus        60 ~~d~vV~SsAI~~~n   74 (89)
T d1j6ua1          60 DPDLVIKTPAVRDDN   74 (89)
T ss_dssp             CCSEEEECTTCCTTC
T ss_pred             CCCEEEEecCcCCCC
Confidence            689999988875443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.11  E-value=1.6  Score=31.38  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=30.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEE--ecChhHHHHHHHHH
Q 023896            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLT--ARDEKRGLEAVEKL   50 (275)
Q Consensus         7 k~vlItGa~~gIG~~~a~~l~~~--g~~vi~~--~r~~~~~~~~~~~l   50 (275)
                      |++.|.|+||-||.....-+.++  .++|+..  .+|...+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            46899999999999988877776  4566654  35555555544443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.97  E-value=0.27  Score=34.45  Aligned_cols=34  Identities=15%  Similarity=0.150  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      .+.++|.|| |-||.++|..|.+.|.+|.++.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            477888888 8999999999999999999997644

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.64  E-value=0.22  Score=39.53  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCCchhHHH-----HHHHHHCCCEEEEEecChh
Q 023896            5 TKKYAVVTGSNKGIGFET-----VRQLASKGITVVLTARDEK   41 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~-----a~~l~~~g~~vi~~~r~~~   41 (275)
                      .+++++|+.|=||.|+..     +..|+++|++|.+++-|++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567788888899999985     7888899999999999976

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.60  E-value=1.2  Score=31.88  Aligned_cols=84  Identities=13%  Similarity=0.101  Sum_probs=51.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCC---CCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD---PELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +-+.|- |-+|..++++|++.|+.+ +..|+..+.....++.......   ......+...+.+...+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            444554 899999999999988755 6788887776665544311100   01133344456666777777776665544


Q ss_pred             CccEEEcCC
Q 023896           86 KLDILTKGD   94 (275)
Q Consensus        86 ~id~li~~a   94 (275)
                      +-.++|..+
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            545555544

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=87.54  E-value=0.5  Score=35.66  Aligned_cols=39  Identities=10%  Similarity=0.078  Sum_probs=34.0

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhH
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~   42 (275)
                      ++.||++.|.|. |.||+.+++.+...|++|+..++....
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            456899999987 899999999999999999999876543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.53  E-value=0.31  Score=38.88  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      +.|+|+|.|| |--|..+|..|+++|++|++..++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3478999998 6779999999999999999998765

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.46  E-value=1.4  Score=32.92  Aligned_cols=75  Identities=19%  Similarity=0.029  Sum_probs=54.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +.+||=.|++.|.   ++..|++.|++|+.++.++...+.+.+.+...+..   +..+..|..+...          .-.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~---~~~~~~d~~~l~~----------~~~  101 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESN---VEFIVGDARKLSF----------EDK  101 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---CEEEECCTTSCCS----------CTT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccc---ccccccccccccc----------cCc
Confidence            4578999998876   66788889999999999988887777666555433   5667777665331          113


Q ss_pred             CccEEEcCCcc
Q 023896           86 KLDILTKGDAE   96 (275)
Q Consensus        86 ~id~li~~ag~   96 (275)
                      .+|++++....
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            78999887554

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.18  E-value=0.23  Score=37.58  Aligned_cols=31  Identities=19%  Similarity=0.229  Sum_probs=27.3

Q ss_pred             CEEEEecCCCchhHH-----HHHHHHHCCCEEEEEe
Q 023896            7 KYAVVTGSNKGIGFE-----TVRQLASKGITVVLTA   37 (275)
Q Consensus         7 k~vlItGa~~gIG~~-----~a~~l~~~g~~vi~~~   37 (275)
                      |+++|||-++|.|+.     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999986     5778888999999986

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.83  E-value=1.1  Score=35.95  Aligned_cols=25  Identities=16%  Similarity=0.226  Sum_probs=21.8

Q ss_pred             CCchhHHHHHHHHHCCCEEEEEecC
Q 023896           15 NKGIGFETVRQLASKGITVVLTARD   39 (275)
Q Consensus        15 ~~gIG~~~a~~l~~~g~~vi~~~r~   39 (275)
                      ||-.|.++|+.|+.+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3678999999999999999998643

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.72  E-value=2  Score=31.76  Aligned_cols=76  Identities=20%  Similarity=0.209  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      ..++||=.|++.|  . .+..|+++|++|+.++.++..++.+.+.....+...  +.+...|+.+..-     +      
T Consensus        30 ~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~~~~~d~~~~~~-----~------   93 (198)
T d2i6ga1          30 APGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDN--LQTDLVDLNTLTF-----D------   93 (198)
T ss_dssp             CSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTT--EEEEECCTTTCCC-----C------
T ss_pred             CCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccc--hhhhheecccccc-----c------
Confidence            4568898888654  3 556788999999999999988887766655544332  6667777665431     1      


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +.+|+++.+...
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            368999876543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.39  E-value=0.38  Score=36.81  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCchhHH-----HHHHHHHCCCEEEEEecCh
Q 023896            6 KKYAVVTGSNKGIGFE-----TVRQLASKGITVVLTARDE   40 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~-----~a~~l~~~g~~vi~~~r~~   40 (275)
                      +|++.|+|+-||.|+.     ++..|++.|.+|.+++-|.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            7899999999999986     5667778899999998664

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.25  E-value=0.39  Score=38.78  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=23.7

Q ss_pred             CEEEEecCCCc-h---hHHHHHHHHHCCCEEEEEecCh
Q 023896            7 KYAVVTGSNKG-I---GFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         7 k~vlItGa~~g-I---G~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      |++||++|+.| -   ..+++++|.++|++|+.++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            45666665433 3   4468999999999998876543

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.22  E-value=2.4  Score=31.28  Aligned_cols=78  Identities=13%  Similarity=0.061  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+++||=.|++.|   .++..|+..+.+|+.++.++...+.+.+.+...+....++.++..|+.+.-.         +  
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~---------~--  117 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK---------D--  117 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT---------T--
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc---------c--
Confidence            5788888887766   3445566778899999999988877776666544444447888888764211         1  


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      ..+|++++|...
T Consensus       118 ~~fD~Ii~~~p~  129 (194)
T d1dusa_         118 RKYNKIITNPPI  129 (194)
T ss_dssp             SCEEEEEECCCS
T ss_pred             CCceEEEEcccE
Confidence            379999988643

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.72  E-value=2  Score=31.39  Aligned_cols=35  Identities=9%  Similarity=-0.127  Sum_probs=22.3

Q ss_pred             EEEEecC-CCchhHHHHHHHHHCC----CEEEEEecChhH
Q 023896            8 YAVVTGS-NKGIGFETVRQLASKG----ITVVLTARDEKR   42 (275)
Q Consensus         8 ~vlItGa-~~gIG~~~a~~l~~~g----~~vi~~~r~~~~   42 (275)
                      .+.|.|| +.|.+..++..+....    -++++.+.++..
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4566676 4556666665555432    389999998854

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.63  E-value=0.43  Score=37.83  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=30.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~   37 (275)
                      ++++++++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            57899999999 59999999999999999988653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.50  E-value=0.61  Score=36.57  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=30.3

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~   37 (275)
                      +++||+|+|-| -|.+|..+++.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            57899999997 59999999999999999998664

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.20  E-value=0.71  Score=37.23  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=30.7

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~   37 (275)
                      ++++|+|+|-|- |.+|..+++.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            578899999987 8999999999999999998764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.07  E-value=2.5  Score=31.73  Aligned_cols=103  Identities=14%  Similarity=0.058  Sum_probs=66.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhcC
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   85 (275)
                      +++||=.|++.|.-   +..|+++|++|+.++-++.-.+.+.+.+...+..  ++.+++.|..+..-          .-+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~--~i~~~~~d~~~l~~----------~~~   80 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQ--QVEYVQGDAEQMPF----------TDE   80 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCC-CCCS----------CTT
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccccc--cccccccccccccc----------ccc
Confidence            57899999887743   4667888999999999998777765555554433  27888888776420          014


Q ss_pred             CccEEEcCCcccccchhhccchhHHHHhHHhhcccHHHHHHHHhhhhhcCCCCeEEEEe
Q 023896           86 KLDILTKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  144 (275)
Q Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  144 (275)
                      .+|+++++.......                   -+..+++.+...|+  ++|++++..
T Consensus        81 ~fD~v~~~~~l~~~~-------------------d~~~~l~~~~r~Lk--pgG~l~i~~  118 (231)
T d1vl5a_          81 RFHIVTCRIAAHHFP-------------------NPASFVSEAYRVLK--KGGQLLLVD  118 (231)
T ss_dssp             CEEEEEEESCGGGCS-------------------CHHHHHHHHHHHEE--EEEEEEEEE
T ss_pred             ccccccccccccccC-------------------CHHHHHHHHHHhcC--CCcEEEEEe
Confidence            789998876543321                   11233455555563  567777653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.95  E-value=2  Score=30.62  Aligned_cols=33  Identities=12%  Similarity=0.141  Sum_probs=24.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC----CEEEEEecCh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKG----ITVVLTARDE   40 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g----~~vi~~~r~~   40 (275)
                      +|-|.||||-.|..+.+.|+++.    .++.+..++.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            57788999999999999888753    2466555443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.77  E-value=2.1  Score=32.76  Aligned_cols=83  Identities=13%  Similarity=0.007  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCC---CCceeEEEecccChHHHHHHHHHHH
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD---PELLLFHQLDISDLASVSSLADFIK   81 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   81 (275)
                      .|.+||-.|+++|--.++..+++....+|+.++++++-.+.+.+.+......   ...+.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            4679999999999988888888887889999999998877776666532211   112666666765321          


Q ss_pred             hhcCCccEEEcCCccc
Q 023896           82 TQFGKLDILTKGDAEV   97 (275)
Q Consensus        82 ~~~g~id~li~~ag~~   97 (275)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124799999987653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.74  E-value=0.48  Score=35.66  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=27.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788885 7889999999999999999998865

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.63  E-value=0.48  Score=37.28  Aligned_cols=31  Identities=26%  Similarity=0.468  Sum_probs=27.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEecCh
Q 023896            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (275)
Q Consensus         9 vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~   40 (275)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 7889999999999999999998753

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.53  E-value=1.4  Score=32.26  Aligned_cols=76  Identities=20%  Similarity=0.152  Sum_probs=43.1

Q ss_pred             EEEEecCCCchhHH--HHHHHHHC----CCEEEEEecChhHHHHHHHHHHh---cCCCCCceeEEEecccChHHHHHHHH
Q 023896            8 YAVVTGSNKGIGFE--TVRQLASK----GITVVLTARDEKRGLEAVEKLKA---SGVDPELLLFHQLDISDLASVSSLAD   78 (275)
Q Consensus         8 ~vlItGa~~gIG~~--~a~~l~~~----g~~vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~   78 (275)
                      ++.|.|| |.+|..  ++..|+..    +.++++.+.|+++++.....++.   .....  ..+..  .+|   .++.+ 
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~--~~i~~--~td---~~eaL-   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGAD--LKFEK--TMN---LDDVI-   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCC--CEEEE--ESC---HHHHH-
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCC--eEEEE--eCC---hhhcc-
Confidence            5667776 666654  45555543    45999999999987765544432   11111  22211  122   22222 


Q ss_pred             HHHhhcCCccEEEcCCcccc
Q 023896           79 FIKTQFGKLDILTKGDAEVD   98 (275)
Q Consensus        79 ~~~~~~g~id~li~~ag~~~   98 (275)
                            ...|++++.++...
T Consensus        75 ------~dad~Vv~~~~~g~   88 (171)
T d1obba1          75 ------IDADFVINTAMVGG   88 (171)
T ss_dssp             ------TTCSEEEECCCTTH
T ss_pred             ------cCCCeEeeeccccc
Confidence                  37899999987644

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.42  E-value=2.6  Score=30.64  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=45.7

Q ss_pred             CCCEEEEe-cCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhh
Q 023896            5 TKKYAVVT-GSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (275)
Q Consensus         5 ~~k~vlIt-Ga~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   83 (275)
                      +|++||=. .|+|.+|.    .++++|++|+.++.|+...+.+.+.++..+... ++...     +.+.   +.......
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~-~v~~~-----~~d~---~~~~~~~~  107 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGA-RVVAL-----PVEV---FLPEAKAQ  107 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCC-EEECS-----CHHH---HHHHHHHT
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhcccc-ceeee-----ehhc---cccccccc
Confidence            46667644 44455554    456679999999999998887777666543321 12221     2221   22223333


Q ss_pred             cCCccEEEcCC
Q 023896           84 FGKLDILTKGD   94 (275)
Q Consensus        84 ~g~id~li~~a   94 (275)
                      ..++|+++.+.
T Consensus       108 ~~~fD~If~DP  118 (171)
T d1ws6a1         108 GERFTVAFMAP  118 (171)
T ss_dssp             TCCEEEEEECC
T ss_pred             CCccceeEEcc
Confidence            35799998875

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.15  E-value=0.49  Score=36.08  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=29.6

Q ss_pred             CEEEEecCCCchhHH-----HHHHHHHCCCEEEEEecChh
Q 023896            7 KYAVVTGSNKGIGFE-----TVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         7 k~vlItGa~~gIG~~-----~a~~l~~~g~~vi~~~r~~~   41 (275)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-|..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            689999999999986     46677888999999987754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.09  E-value=6.6  Score=28.66  Aligned_cols=81  Identities=11%  Similarity=0.115  Sum_probs=54.1

Q ss_pred             ccCCCEEE-EecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHH
Q 023896            3 EATKKYAV-VTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (275)
Q Consensus         3 ~~~~k~vl-ItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   80 (275)
                      ..+|++|| +..|+|.+|.+    .+++|+ .|+.++.+....+.+.+.+...... .++.++..|+.      +++++.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~-~~~~i~~~D~~------~~l~~~  107 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEP-EKFEVRKMDAN------RALEQF  107 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcc-cccccccccch------hhhhhh
Confidence            34677777 55666777775    455787 6999999998888777766543322 23777777764      234444


Q ss_pred             HhhcCCccEEEcCC
Q 023896           81 KTQFGKLDILTKGD   94 (275)
Q Consensus        81 ~~~~g~id~li~~a   94 (275)
                      ...-.+.|+++...
T Consensus       108 ~~~~~~fDlIflDP  121 (182)
T d2fhpa1         108 YEEKLQFDLVLLDP  121 (182)
T ss_dssp             HHTTCCEEEEEECC
T ss_pred             cccCCCcceEEech
Confidence            44445799998775

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.01  E-value=0.49  Score=34.57  Aligned_cols=32  Identities=19%  Similarity=0.213  Sum_probs=26.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEe
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~   37 (275)
                      .+++|+|.|| |.+|.+++..|.+.|+++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4678888887 8999999999999998755443

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.39  E-value=3.8  Score=32.21  Aligned_cols=45  Identities=13%  Similarity=0.093  Sum_probs=35.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS   53 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~   53 (275)
                      +++||=.|++.|.   ++..|+++|++|+.++.++.-++.+.+.....
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~  101 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR  101 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence            5789988988775   46667888999999999998877766655443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.27  E-value=0.57  Score=37.29  Aligned_cols=32  Identities=16%  Similarity=0.335  Sum_probs=27.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEecCh
Q 023896            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (275)
Q Consensus         8 ~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~   40 (275)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788887 7999999999999996 699998864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.19  E-value=0.97  Score=33.75  Aligned_cols=38  Identities=26%  Similarity=0.178  Sum_probs=32.9

Q ss_pred             ccCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChh
Q 023896            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (275)
Q Consensus         3 ~~~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~   41 (275)
                      ++.++++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            357889998865 89999999999999999999997653

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.54  E-value=3.1  Score=33.37  Aligned_cols=76  Identities=20%  Similarity=0.146  Sum_probs=49.3

Q ss_pred             cCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHh
Q 023896            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (275)
Q Consensus         4 ~~~k~vlItGa~~gIG~~~a~~l~~~g~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   82 (275)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+..... +...++.++..|+.+.+.          
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n-~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKAN-KLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHT-TCTTTEEEEESCTTTCCC----------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHh-CCccccceEeccHHHccc----------
Confidence            368999999998875   4556777786 6988987764 33333333322 222348888888876431          


Q ss_pred             hcCCccEEEcCC
Q 023896           83 QFGKLDILTKGD   94 (275)
Q Consensus        83 ~~g~id~li~~a   94 (275)
                      ...++|+++..-
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            124789998753

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.27  E-value=3.7  Score=27.68  Aligned_cols=80  Identities=10%  Similarity=0.095  Sum_probs=52.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChH-HHHHHHHHHHhhc
Q 023896            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA-SVSSLADFIKTQF   84 (275)
Q Consensus         6 ~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   84 (275)
                      +|+|||.--...+-..+.+.|-..|++|.... +...+-   +.+....     ...+-+|+.-++ +=.++++++++..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~-~g~eal---~~~~~~~-----~dlillD~~mP~~~G~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA-NGLQAL---DIVTKER-----PDLVLLDMKIPGMDGIEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHH---HHHHHHC-----CSEEEEESCCTTCCHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC-CHHHHH---HHHHhCC-----CCEEEEeccCCCCCHHHHHHHHHHhC
Confidence            57899999999999999999999999988544 443332   2333322     345556666443 2245567777776


Q ss_pred             CCccEEEcCC
Q 023896           85 GKLDILTKGD   94 (275)
Q Consensus        85 g~id~li~~a   94 (275)
                      +.+-+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            6677776654

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.64  E-value=0.59  Score=36.74  Aligned_cols=34  Identities=29%  Similarity=0.454  Sum_probs=28.1

Q ss_pred             CEEEEecCCCchhHHH-----HHHHHHCCCEEEEEecChh
Q 023896            7 KYAVVTGSNKGIGFET-----VRQLASKGITVVLTARDEK   41 (275)
Q Consensus         7 k~vlItGa~~gIG~~~-----a~~l~~~g~~vi~~~r~~~   41 (275)
                      |++.|+| =||.|+..     +..|++.|++|.++|-|++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5677898 89999874     5578889999999998875

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=80.47  E-value=3.8  Score=31.29  Aligned_cols=75  Identities=15%  Similarity=-0.119  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEecChhHHHHHHHHHHhcCCCCCceeEEEecccChHHHHHHHHHHHhhc
Q 023896            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (275)
Q Consensus         5 ~~k~vlItGa~~gIG~~~a~~l~~~g~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   84 (275)
                      .+.+||-.|+++|--.++   |+..+.+|+.+++++.-.+.+.+.+. ...   .+.++..|...-.          ...
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~---nv~~~~~d~~~g~----------~~~  132 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYN---NIKLILGDGTLGY----------EEE  132 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCS---SEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-ccc---ccccccCchhhcc----------hhh
Confidence            467899999998865555   44445689999999987766654443 222   2778888875421          112


Q ss_pred             CCccEEEcCCcc
Q 023896           85 GKLDILTKGDAE   96 (275)
Q Consensus        85 g~id~li~~ag~   96 (275)
                      +++|.++.+++.
T Consensus       133 ~pfD~Iiv~~a~  144 (224)
T d1vbfa_         133 KPYDRVVVWATA  144 (224)
T ss_dssp             CCEEEEEESSBB
T ss_pred             hhHHHHHhhcch
Confidence            579999988764