Citrus Sinensis ID: 023909

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHcccccHHHccccccccccccccccccccHHHHHHHcccccccccEEEEcccccccccccHHHHHHHHHcccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcHHHHHHHHHHcccccEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccEEEEEEEEEEccEccHHHHHHHHHHccccEEEccccccccccccEEEccccccHHHHccccHHHHccHHHHHHHHHHHHHHHHccccHHHHccccHHcEEEEEccccccHHHHHHHHHHHHcccHHccccHHHHHcccHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
matfslqsplctspipyyrndHALMSSMLQSSKRHKKLISRCNfgktvamsdaqSEKDLIITkhkepkerrIVVTGlgavtplgddahLFHTSLLegvtgisdiqgfdcsefpTRIAAEIKSlstggwispkiaKKADKYLIYALVAGKKALVDAgiteqvsgeldksrcgvIIGSAMGGLRVLNDGFEAIKVSYKkmspfyipysltNMASAVLAMdlgwtgpsysistacassnysilnatshiikgdtdimlcggsdgmiipsgtvnkavaf
Flexible Loop (DISEMBL)
matfslqsplctSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGktvamsdaqsekdliitkhkepkerriVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKslstggwispKIAKKADKYLIYALVAGKKALVDAGITeqvsgeldksrcGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Low Complexity Region (SEG)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Disordered region (IsUnstruct)
**************IPYYR*******************ISRCNFGKT************II********RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP**********
Disordered Region (DISOPRED)
********PLCT**IP******************************************************RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Disordered Region (DISEMBL)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Disordered Region (DISPRO)
******************************************************************PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATFSLQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
Q9C9P4	541	3-oxoacyl-[acyl-carrier-p	yes	no	0.916	0.465	0.542	1e-81
P52410	473	3-oxoacyl-[acyl-carrier-p	no	no	0.898	0.522	0.398	3e-49
P23902	462	3-oxoacyl-[acyl-carrier-p	N/A	no	0.741	0.441	0.442	5e-47
Q9KQH9	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.712	0.473	0.37	2e-31
P55338	415	3-oxoacyl-[acyl-carrier-p	yes	no	0.705	0.467	0.371	6e-31
O34340	413	3-oxoacyl-[acyl-carrier-p	yes	no	0.68	0.452	0.369	9e-31
P73283	416	3-oxoacyl-[acyl-carrier-p	N/A	no	0.709	0.468	0.361	1e-29
Q83E37	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.716	0.475	0.353	1e-29
Q8NXE1	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.701	0.466	0.324	1e-26
Q6GAU2	414	3-oxoacyl-[acyl-carrier-p	yes	no	0.701	0.466	0.324	1e-26

>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1

 Score =  302 bits (774), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 140/258 (54%), Positives = 195/258 (75%), Gaps = 6/258 (2%)

Query: 14  PIPYYRNDHALMSSMLQSS----KRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKE 69
           P  +Y N++AL SS+  S+     R+++ ++R       AM+  + EK+  + K    ++
Sbjct: 72  PCTHYNNNNAL-SSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQ 129

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           +PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249

Query: 190 AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
           A+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309

Query: 250 DTDIMLCGGSDGMIIPSG 267
           + D+MLCGGSD +IIP G
Sbjct: 310 EADVMLCGGSDAVIIPIG 327

Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1

>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2

 Score =  195 bits (496), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 158/261 (60%), Gaps = 14/261 (5%)

Query: 8   SPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEP 67
           SP     +P  R  H L+++     ++ +  IS         +S  + E D        P
Sbjct: 12  SPPNPLRLPSNRQSHQLITNARPLRRQQRSFIS----ASASTVSAPKRETD--------P 59

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           K +R+V+TG+G V+  G+D   ++  LL G +GIS I  FD S+FPTR   +I+  S+ G
Sbjct: 60  K-KRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEG 118

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           +I  K  ++ D  L Y +VAGKKAL  A +       +DK + GV++G+ MGGL V ++G
Sbjct: 119 YIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEG 178

Query: 188 FEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            +  I+  ++++SPF+IPY++TNM SA+LA+DLG  GP+YSISTACA+SNY    A +HI
Sbjct: 179 VQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHI 238

Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
            +G+ D+M+ GG++  IIP G
Sbjct: 239 RRGEADMMIAGGTEAAIIPIG 259

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1

 Score =  187 bits (476), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 139/208 (66%), Gaps = 4/208 (1%)

Query: 63  KHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS 122
           +  +P+ +R+V+TG+G  +  G D   F+  LL G +G+  I  FD S FPTR A +I+ 
Sbjct: 42  RETDPR-KRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRG 100

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGG 180
            S+ G+I  K  ++ D  + Y +++GKKAL  AG+        +LD  R GV++G+ MGG
Sbjct: 101 FSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGG 160

Query: 181 LRVLNDGFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
           L V +DG +  I+  Y+K+SPF+IPY++TNM SA+LA+D+G+ GP+YSISTACA+SNY  
Sbjct: 161 LSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCF 220

Query: 240 LNATSHIIKGDTDIMLCGGSDGMIIPSG 267
             A +HI +G+ DI++ GG++  IIP G
Sbjct: 221 YAAANHIRRGEADIIVAGGTEAAIIPIG 248

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 4/200 (2%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +S K A+K D ++ Y + AG +AL D+G+      E + +R GV IGS +GGL ++  G 
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALEDSGLEVN---EENAARIGVAIGSGIGGLELIETGH 119

Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query: 248 KGDTDIMLCGGSDGMIIPSG 267
            GD D M+ GG++    P G
Sbjct: 180 YGDADAMVAGGAEKASTPLG 199

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2

 Score =  134 bits (338), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LLEG +GI +I+ FD + F TR A  +K      +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           +S K A+K D ++ Y + AG +AL D+G  ITE+     + +R GV IGS +GGL ++  
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-----NAARVGVAIGSGIGGLDLIEA 117

Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
           G  A ++   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177

Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD + M+ GG++    P G
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLG 199

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio harveyi (taxid: 669)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1

 Score =  134 bits (336), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 119/195 (61%), Gaps = 8/195 (4%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           ++R+VVTGLGA++PLG+D      + + GV+GI  I   D  E+P ++AAE+K  +   +
Sbjct: 3   KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           +  K A+K D++  YA+VA K A+ DA   IT++++      R GV +GS +GGL  L  
Sbjct: 63  MDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA-----PRVGVWVGSGIGGLETLES 117

Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
            FE  +    +++SPF++P  + +MA+  +++ LG  G +    TACA+   SI +A   
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177

Query: 246 IIKGDTDIMLCGGSD 260
           I +GD D+M+ GG++
Sbjct: 178 IQRGDADVMVTGGTE 192

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 4/199 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           +++R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      
Sbjct: 5   EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQ 64

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           ++  K AK+ D++  +A+ A ++A+ DA +   V  EL+    GV+IG+ +GGL+VL D 
Sbjct: 65  FLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQ 121

Query: 188 FE-AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
               +     + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLV 181

Query: 247 IKGDTDIMLCGGSDGMIIP 265
             G    M+CGG++  I P
Sbjct: 182 QNGYAKAMICGGTEAAITP 200

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 4/201 (1%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           ++RR+V+TGLG V+PLG+       +LL G +G+  I  FD S FPT+IAAE++      
Sbjct: 2   EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            +  K  +K D ++ +A+ + ++A  D+G+      E +  R GV IGS +GG+  +   
Sbjct: 62  VLDLKSIRKTDVFVQFAMESARQAWEDSGLEIN---ETNAPRVGVAIGSGIGGMPWIEKN 118

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++A+  S  +K+SPF+IP ++ NMAS ++++     GP+ SI TAC +  ++I +A   I
Sbjct: 119 YDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMI 178

Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
              D D M+ GG++    P G
Sbjct: 179 AHNDADAMIAGGTEMASTPLG 199

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1

 Score =  120 bits (300), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 3   QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 63  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 119

Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179

Query: 247 IKGDTDIMLCGGSDGMI 263
            +GD D M+ GG++  I
Sbjct: 180 QRGDADAMITGGTEAPI 196

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain MW2) (taxid: 196620)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1

 Score =  120 bits (300), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 3   QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 63  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 119

Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179

Query: 247 IKGDTDIMLCGGSDGMI 263
            +GD D M+ GG++  I
Sbjct: 180 QRGDADAMITGGTEAPI 196

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Staphylococcus aureus (strain MSSA476) (taxid: 282459)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
408384466	554	beta-ketoacyl-ACP synthase II [Camelina	0.923	0.458	0.540	2e-81
346995771	573	beta-ketoacyl-ACP synthase II [Jatropha	0.941	0.452	0.543	5e-81
294666	535	chloroplast beta-ketoacyl-ACP synthase p	0.949	0.487	0.543	9e-81
255550355	554	46 kDa ketoavyl-ACP synthase [Ricinus co	0.949	0.471	0.543	1e-80
297738522	517	unnamed protein product [Vitis vinifera]	0.916	0.487	0.555	2e-80
225444641	555	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.930	0.461	0.553	2e-80
408384464	553	beta-ketoacyl-ACP synthase II [Camelina	0.861	0.428	0.569	2e-80
408384468	556	beta-ketoacyl-ACP synthase II [Camelina	0.861	0.426	0.571	6e-80
112430753	491	plastid 3-keto-acyl-ACP synthase II [Hel	0.836	0.468	0.579	8e-80
18410739	541	3-oxoacyl-[acyl-carrier-protein] synthas	0.916	0.465	0.542	8e-80

>gi|408384466|gb|AFU61918.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/259 (54%), Positives = 193/259 (74%), Gaps = 5/259 (1%)

Query: 14  PIPYYRNDH-----ALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPK 68
           P  +Y N +     +L  S   S  R+++ ++R       AM+  + EK+ ++ K    +
Sbjct: 82  PCTHYSNTNNNALSSLFGSNTLSVNRNQRRLNRATPSSGGAMAVMEMEKEAMVNKKPPTE 141

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G  TPLG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW
Sbjct: 142 QRRVVVTGMGVETPLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGW 201

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           ++PK++K+ DK+++Y L AGKKAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  
Sbjct: 202 VAPKLSKRMDKFMLYLLTAGKKALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAI 261

Query: 189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           EA+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIK
Sbjct: 262 EALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIK 321

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G+ D+MLCGGSD +IIP G
Sbjct: 322 GEADVMLCGGSDAVIIPIG 340

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346995771|gb|ABJ90469.2| beta-ketoacyl-ACP synthase II [Jatropha curcas]

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 143/263 (54%), Positives = 198/263 (75%), Gaps = 4/263 (1%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNF-GKTVAMSDAQSEKDLIITKH 64
           + S L   P   Y + + L  S  ++  R ++ ++R    G+ +A++  Q EK++   K 
Sbjct: 100 MSSCLAFEPCSQYYSSNGLFRS--RNLNRKQRRLNRLALSGEAMAIA-VQPEKEVATKKK 156

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG +  +F+ +LLEGV+GIS I+ F+C++FPTRIA EIKS S
Sbjct: 157 PATKQRRVVVTGMGVVSPLGHEPDVFYNNLLEGVSGISQIEAFECAQFPTRIAGEIKSFS 216

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GWI+PK++K+ DK+++Y L AGKKAL D GITE +  ELDK++CGV+IGSAMGG++V 
Sbjct: 217 TDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDIMDELDKAKCGVLIGSAMGGMKVF 276

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 277 NDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 336

Query: 245 HIIKGDTDIMLCGGSDGMIIPSG 267
           HII+G+ DIMLCGGSD  IIP G
Sbjct: 337 HIIRGEADIMLCGGSDAAIIPIG 359

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis]

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 143/263 (54%), Positives = 195/263 (74%), Gaps = 2/263 (0%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRC-NFGKTVAMSDAQSEKDLIITKH 64
           + S L   P  +Y + + L  +     KRH +L  R    G+ +A++  Q EK++   K 
Sbjct: 60  MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVA-VQPEKEVATNKK 118

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG D  +++ +LL+G +GIS I  FDC++FPTRIA EIKS S
Sbjct: 119 PLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAGEIKSFS 178

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GW++PK++K+ DK+++Y L AGKKAL D GITE +  ELDK+RCGV+IGSAMGG++V 
Sbjct: 179 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 238

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA+++SY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 239 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 298

Query: 245 HIIKGDTDIMLCGGSDGMIIPSG 267
           HII+G+ DIMLCGGSD  IIP G
Sbjct: 299 HIIRGEADIMLCGGSDAAIIPIG 321

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/263 (54%), Positives = 195/263 (74%), Gaps = 2/263 (0%)

Query: 6   LQSPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRC-NFGKTVAMSDAQSEKDLIITKH 64
           + S L   P  +Y + + L  +     KRH +L  R    G+ +A++  Q EK++   K 
Sbjct: 79  MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVA-VQPEKEVATNKK 137

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
              K+RR+VVTG+G V+PLG D  +++ +LL+G +GIS I  FDC++FPTRIA EIKS S
Sbjct: 138 PLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAGEIKSFS 197

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
           T GW++PK++K+ DK+++Y L AGKKAL D GITE +  ELDK+RCGV+IGSAMGG++V 
Sbjct: 198 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 257

Query: 185 NDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           ND  EA+++SY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA +
Sbjct: 258 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 317

Query: 245 HIIKGDTDIMLCGGSDGMIIPSG 267
           HII+G+ DIMLCGGSD  IIP G
Sbjct: 318 HIIRGEADIMLCGGSDAAIIPIG 340

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera]

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/259 (55%), Positives = 198/259 (76%), Gaps = 7/259 (2%)

Query: 15  IPY--YRNDHALMSSM----LQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPK 68
           +PY  +  D+AL S      L  ++R ++     + G+T+A++  Q  K++   K    +
Sbjct: 46  LPYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVA-VQPAKEVTTKKKPLTE 104

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G +   F+ +LLEGV+GIS+I+ FDCS FPTRIA EIKS ST GW
Sbjct: 105 QRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAGEIKSFSTDGW 164

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           I+PK++K+ DK+++Y L AGKKAL D GITE V+ ELDKSRCGV+IGSAMGG++V ND  
Sbjct: 165 IAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKVFNDAI 224

Query: 189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA++HII+
Sbjct: 225 EALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNASNHIIR 284

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G+ D+MLCGGSD  IIP G
Sbjct: 285 GEADMMLCGGSDAAIIPIG 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/264 (55%), Positives = 201/264 (76%), Gaps = 8/264 (3%)

Query: 11  CTSP-IPY--YRNDHALMSSM----LQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITK 63
           C+S  +PY  +  D+AL S      L  ++R ++     + G+T+A++  Q  K++   K
Sbjct: 79  CSSKGLPYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVA-VQPAKEVTTKK 137

Query: 64  HKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSL 123
               ++RR+VVTG+G ++P+G +   F+ +LLEGV+GIS+I+ FDCS FPTRIA EIKS 
Sbjct: 138 KPLTEQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAGEIKSF 197

Query: 124 STGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRV 183
           ST GWI+PK++K+ DK+++Y L AGKKAL D GITE V+ ELDKSRCGV+IGSAMGG++V
Sbjct: 198 STDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKV 257

Query: 184 LNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            ND  EA++VSY+KM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILNA+
Sbjct: 258 FNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAS 317

Query: 244 SHIIKGDTDIMLCGGSDGMIIPSG 267
           +HII+G+ D+MLCGGSD  IIP G
Sbjct: 318 NHIIRGEADMMLCGGSDAAIIPIG 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class: N/A

Phylum: Streptophyta

>gi|408384464|gb|AFU61917.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 136/239 (56%), Positives = 186/239 (77%), Gaps = 2/239 (0%)

Query: 31  SSKRHKKLISRCNFGKTV--AMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAH 88
           S  RH++ ++R     +   AM+  + EK+ ++ K    ++RR+VVTG+G  TPLG D H
Sbjct: 101 SLNRHQRRLNRATSSSSSGGAMAVMEMEKEAMVNKKPPTEQRRVVVTGMGVETPLGHDPH 160

Query: 89  LFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG 148
            F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++PK++K+ DK+++Y L AG
Sbjct: 161 TFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAG 220

Query: 149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT 208
           KKAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  EA+++SYKKM+PF +P++ T
Sbjct: 221 KKALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATT 280

Query: 209 NMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           NM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+ D+MLCGGSD +IIP G
Sbjct: 281 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIPIG 339

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|408384468|gb|AFU61919.1| beta-ketoacyl-ACP synthase II [Camelina sativa]

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 136/238 (57%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 31  SSKRHKKLISRCNFGKTV-AMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHL 89
           S  RH++ ++R     +  AM+  + EK+ ++ K    ++RR+VVTG+G  TPLG D H 
Sbjct: 105 SLNRHQRRLNRAASPSSGGAMAVMEMEKEAMVNKKPPTEQRRVVVTGMGVETPLGHDPHT 164

Query: 90  FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK 149
           F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++PK++K+ DK+++Y L AGK
Sbjct: 165 FYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAGK 224

Query: 150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           KAL D G+TE+V  E DK++CGV+IGSAMGG++V  D  EA+++SYKKM+PF +P++ TN
Sbjct: 225 KALADGGVTEEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATTN 284

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           M SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+ D+MLCGGSD +IIP G
Sbjct: 285 MGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIPIG 342

Source: Camelina sativa

Species: Camelina sativa

Genus: Camelina

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|112430753|gb|ABI18155.1| plastid 3-keto-acyl-ACP synthase II [Helianthus annuus]

 Score =  303 bits (775), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 138/238 (57%), Positives = 188/238 (78%), Gaps = 8/238 (3%)

Query: 38  LISRCNFGKTVAMSDA------QSEKDLIITKHKEP--KERRIVVTGLGAVTPLGDDAHL 89
           L SRC  G  VAM+ A      + E++  +TK K+P  K+RR+VVTG+G  TP+G++   
Sbjct: 40  LSSRCRRGGRVAMAIAIQPSSIEMEEETTLTKRKQPPTKQRRVVVTGMGVETPIGNNPDQ 99

Query: 90  FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK 149
           F+ +LL+GV+GI+ I+ FDCS +PTRIA EIK+ ST GW++PK++K+ D++++Y L AGK
Sbjct: 100 FYNNLLQGVSGITQIEAFDCSSYPTRIAGEIKNFSTDGWVAPKLSKRMDRFMLYMLTAGK 159

Query: 150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           KAL DAGI+   S E+DKSRCGV+IGSAMGG++V ND  EA++VSY+KM+PF +P++ TN
Sbjct: 160 KALADAGISPSDSDEIDKSRCGVLIGSAMGGMKVFNDAIEALRVSYRKMNPFCVPFATTN 219

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           M SA+LAMDLGW GP+YSISTACA+SN+ ILNA +HII+G+ D+MLCGGSD +IIP G
Sbjct: 220 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADMMLCGGSDAVIIPIG 277

Source: Helianthus annuus

Species: Helianthus annuus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410739|ref|NP_565097.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|30699063|ref|NP_849888.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|334183918|ref|NP_001185400.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|75308921|sp|Q9C9P4.1|KASC2_ARATH RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic; AltName: Full=Beta-ketoacyl-acyl-carrier-protein synthase II; Short=AtKAS2; Short=Beta-ketoacyl-ACP synthetase 2; AltName: Full=Protein FATTY ACID BIOSYNTHESIS 1; Flags: Precursor gi|12323894|gb|AAG51920.1|AC013258_14 putative 3-ketoacyl-ACP synthase; 47419-50803 [Arabidopsis thaliana] gi|14582701|gb|AAK69603.1|AF318307_1 beta-ketoacyl-ACP synthetase 2 [Arabidopsis thaliana] gi|16930489|gb|AAL31930.1|AF419598_1 At1g74960/F9E10_19 [Arabidopsis thaliana] gi|15809858|gb|AAL06857.1| At1g74960/F9E10_19 [Arabidopsis thaliana] gi|20453243|gb|AAM19860.1| At1g74960/F9E10_19 [Arabidopsis thaliana] gi|332197534|gb|AEE35655.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|332197535|gb|AEE35656.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana] gi|332197536|gb|AEE35657.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Arabidopsis thaliana]

 Score =  302 bits (774), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 140/258 (54%), Positives = 195/258 (75%), Gaps = 6/258 (2%)

Query: 14  PIPYYRNDHALMSSMLQSS----KRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKE 69
           P  +Y N++AL SS+  S+     R+++ ++R       AM+  + EK+  + K    ++
Sbjct: 72  PCTHYNNNNAL-SSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQ 129

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           +PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249

Query: 190 AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
           A+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309

Query: 250 DTDIMLCGGSDGMIIPSG 267
           + D+MLCGGSD +IIP G
Sbjct: 310 EADVMLCGGSDAVIIPIG 327

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class: N/A

Phylum: Streptophyta

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
TAIR|locus:2027252	541	FAB1 "fatty acid biosynthesis	0.92	0.467	0.544	2.7e-75
TIGR_CMR|SO_2774	412	SO_2774 "3-oxoacyl-(acyl-carri	0.712	0.475	0.35	1.3e-31
TIGR_CMR|GSU_1605	410	GSU_1605 "3-oxoacyl-(acyl-carr	0.730	0.490	0.375	1.6e-31
UNIPROTKB|Q9KQH9	414	fabF "3-oxoacyl-[acyl-carrier-	0.712	0.473	0.375	2e-31
TIGR_CMR|VC_2019	414	VC_2019 "3-oxoacyl-(acyl-carri	0.712	0.473	0.375	2e-31
TIGR_CMR|CHY_1445	412	CHY_1445 "3-oxoacyl-(acyl-carr	0.701	0.468	0.340	6.2e-30
UNIPROTKB|P0AAI5	413	fabF "FabF" [Escherichia coli	0.712	0.474	0.365	7.9e-30
TIGR_CMR|CBU_0497	414	CBU_0497 "3-oxoacyl-acyl carri	0.716	0.475	0.353	1e-29
UNIPROTKB|Q71XG4	413	fabF "3-oxoacyl-[acyl-carrier-	0.738	0.491	0.331	3.4e-29
TIGR_CMR|CPS_2299	412	CPS_2299 "3-oxoacyl-[acyl-carr	0.683	0.456	0.360	1.5e-28

TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 140/257 (54%), Positives = 193/257 (75%)

Query:    14 PIPYYRNDHALMS---SMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKER 70
             P  +Y N++AL S   S   S  R+++ ++R       AM+  + EK+  + K    ++R
Sbjct:    72 PCTHYNNNNALSSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQR 130

Query:    71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWIS 130
             R+VVTG+G  T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW++
Sbjct:   131 RVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVA 190

Query:   131 PKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEA 190
             PK++K+ DK+++Y L AGKKAL D G+T++V  E DK++CGV+IGSAMGG++V  D  EA
Sbjct:   191 PKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEA 250

Query:   191 IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGD 250
             +++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG+
Sbjct:   251 LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGE 310

Query:   251 TDIMLCGGSDGMIIPSG 267
              D+MLCGGSD +IIP G
Sbjct:   311 ADVMLCGGSDAVIIPIG 327

GO:0003824 "catalytic activity" evidence=IEA

GO:0004312 "fatty acid synthase activity" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA;TAS

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0009536 "plastid" evidence=ISS

GO:0009631 "cold acclimation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 70/200 (35%), Positives = 120/200 (60%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTGLG VTP+G+       +LL G +GI+ I  FD SEF TR +  +K      +
Sbjct:     3 KRRVVVTGLGLVTPVGNTVDTTWKALLSGKSGIAPITKFDASEFTTRFSGSVKDFDVEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             ++ K A+K D ++ Y + AG +A+ D+G+      +++  R G  IG+ MGG+ ++    
Sbjct:    63 LTKKDARKMDLFIQYGMAAGIQAIQDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQNH 119

Query:   189 EAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
              A+     +K+SPF++P ++ NM +  L++  G TGP+++++TAC +  ++I  A   I 
Sbjct:   120 SALMNGGPRKISPFFVPSTIINMIAGHLSIMYGMTGPNFAVTTACTTGVHNIGFAARTIA 179

Query:   248 KGDTDIMLCGGSDGMIIPSG 267
              GD D+M+ GG++ +  P G
Sbjct:   180 YGDADVMVAGGAEDVTCPLG 199

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 77/205 (37%), Positives = 120/205 (58%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             RR+VVTG+GAV+PLG        +L+ G +GI  I  FD S+ P RIA E+K      +I
Sbjct:     2 RRVVVTGVGAVSPLGVGNAANWDALVSGTSGIGHITRFDASDLPVRIAGEVKGFDPEQYI 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
               K  KK D ++ YA+ A   A+ D+G+  Q++ E +  R GV++G+ +GGL  +     
Sbjct:    62 DKKEVKKMDLFIQYAMAAAHYAMEDSGL--QITEE-NAERTGVLVGAGLGGLPTIEKYHA 118

Query:   190 A-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
             A ++  +KK+SPF+IP  + N+A   +++  G  GP+ S  +ACA+  +SI +A   I +
Sbjct:   119 AMLEGGHKKISPFFIPMLIINLAPGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIKR 178

Query:   249 GDTDIMLCGGSDGMIIPSGTVNKAV 273
             GD D M+ GG++  + P G    AV
Sbjct:   179 GDADAMIAGGTESTVTPLGIGGFAV 203

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 75/200 (37%), Positives = 124/200 (62%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct:     3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +S K A+K D ++ Y + AG +AL D+G+  +V+ E + +R GV IGS +GGL ++  G 
Sbjct:    63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct:   120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query:   248 KGDTDIMLCGGSDGMIIPSG 267
              GD D M+ GG++    P G
Sbjct:   180 YGDADAMVAGGAEKASTPLG 199

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 75/200 (37%), Positives = 124/200 (62%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K      +
Sbjct:     3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +S K A+K D ++ Y + AG +AL D+G+  +V+ E + +R GV IGS +GGL ++  G 
Sbjct:    63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             +A I+   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct:   120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query:   248 KGDTDIMLCGGSDGMIIPSG 267
              GD D M+ GG++    P G
Sbjct:   180 YGDADAMVAGGAEKASTPLG 199

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 67/197 (34%), Positives = 122/197 (61%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             +R+VVTGLG ++PLG        +L++GV+G+ ++  FD + F TRIAAE++      +I
Sbjct:     2 KRVVVTGLGLISPLGIGIKENWDNLMKGVSGVREVSSFDTTGFATRIAAEVRDFDPLKFI 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
               K A++ D++  +A+ A K A+ DAG+  ++S +++  R G+ IGS +GG++ L +   
Sbjct:    62 DKKEARRMDRFTQFAVAATKLAIEDAGL--ELS-KINPERAGIFIGSGIGGIKTLEEQAA 118

Query:   190 AIKVSYK-KMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
              ++     ++SPF++P  + NMA   +A+  G TGP+ +I +ACAS   ++ +A   + +
Sbjct:   119 ILREKGPDRVSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQR 178

Query:   249 GDTDIMLCGGSDGMIIP 265
             G+ D+ + GG++  I P
Sbjct:   179 GEVDVAIAGGAEAAITP 195

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 73/200 (36%), Positives = 120/200 (60%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct:     3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             IS K  +K D ++ Y +VAG +A+ D+G+  +++ E + +R G  IGS +GGL ++ +  
Sbjct:    63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEE-NATRIGAAIGSGIGGLGLIEENH 119

Query:   189 EAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   I 
Sbjct:   120 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIA 179

Query:   248 KGDTDIMLCGGSDGMIIPSG 267
              GD D+M+ GG++    P G
Sbjct:   180 YGDADVMVAGGAEKASTPLG 199

GO:0008152 "metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0033817 "beta-ketoacyl-acyl-carrier-protein synthase II activity" evidence=IEA;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 71/201 (35%), Positives = 121/201 (60%)

Query:    68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
             ++RR+V+TGLG V+PLG+       +LL G +G+  I  FD S FPT+IAAE++      
Sbjct:     2 EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61

Query:   128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
              +  K  +K D ++ +A+ + ++A  D+G+  +++ E +  R GV IGS +GG+  +   
Sbjct:    62 VLDLKSIRKTDVFVQFAMESARQAWEDSGL--EIN-ETNAPRVGVAIGSGIGGMPWIEKN 118

Query:   188 FEAIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
             ++A+  S  +K+SPF+IP ++ NMAS ++++     GP+ SI TAC +  ++I +A   I
Sbjct:   119 YDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMI 178

Query:   247 IKGDTDIMLCGGSDGMIIPSG 267
                D D M+ GG++    P G
Sbjct:   179 AHNDADAMIAGGTEMASTPLG 199

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q71XG4 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 70/211 (33%), Positives = 125/211 (59%)

Query:    69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
             +RR+VVTG+GAVTP+G+DA     +  +GV G++ +   +  +FP +IAAE+K      +
Sbjct:     3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKY 62

Query:   129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +  K A+K D++  YA+ + + A+ D+G+   V  + + +R GV IGS +GG+      +
Sbjct:    63 LEKKEARKMDRFTHYAIASAEMAVQDSGL---VIDDSNANRVGVWIGSGIGGMETFETQY 119

Query:   189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             E  +   ++++SPF++P  + +M S  +++  G  G + +  TACA++  SI +A   I 
Sbjct:   120 EIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179

Query:   248 KGDTDIMLCGGSDG----MIIPSGTVNKAVA 274
             +GD D M+ GG++     M +   T NKA++
Sbjct:   180 RGDADAMITGGAEAPITKMSLAGFTANKALS 210

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 70/194 (36%), Positives = 118/194 (60%)

Query:    70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
             RR+VVTG+G ++PL + A     +LL G +GI +I  FD +++PT+ A  +K      ++
Sbjct:     2 RRVVVTGIGMLSPLANTAEETWQNLLLGKSGIGNIDHFDTTDYPTKFAGLVKDFDAQNYM 61

Query:   130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF- 188
               K AKK D ++ Y + AG +A  D+G+  +V+ E +  R GV IGS +GGL ++     
Sbjct:    62 ERKEAKKMDLFIQYGIAAGVQAFKDSGL--EVT-EQNAPRIGVAIGSGIGGLGLIEQNHN 118

Query:   189 EAIKV--SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
             + IK   + +K+SPF++P ++ NM +  L++  G  GP+ +I+TAC S  ++I +A   I
Sbjct:   119 KLIKAEGNPRKLSPFFVPSTIINMIAGHLSIMFGLQGPNIAITTACTSGVHNIGHAARMI 178

Query:   247 IKGDTDIMLCGGSD 260
               GD D ++ GG++
Sbjct:   179 AYGDADAVVAGGAE 192

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034037001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (502 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00024012001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa)	•	•	•	•		•	•		0.991
	GSVIVG00007299001	SubName- Full=Chromosome chr2 scaffold_187, whole genome shotgun sequence; (431 aa)	•		•	•		•	•		0.990
	GSVIVG00024709001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (393 aa)				•		•	•		0.919
	GSVIVG00017895001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (269 aa)	•					•			0.910
	GSVIVG00035074001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (269 aa)	•					•			0.910
	GSVIVG00025373001	SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (369 aa)						•	•		0.909
	GSVIVG00016807001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (421 aa)						•	•		0.904
	GSVIVG00017969001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (374 aa)						•	•		0.900
	GSVIVG00034687001	RecName- Full=Acyl-[acyl-carrier protein] desaturase; EC=1.14.19.2;; Converts stearoyl-ACP to o [...] (392 aa)						•			0.899
	GSVIVG00034686001	SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (262 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	275
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	1e-109
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	1e-71
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	8e-65
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	6e-60
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	2e-58
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	4e-50
pfam00109	243	pfam00109, ketoacyl-synt, Beta-ketoacyl synthase,	7e-42
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	3e-38
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	7e-37
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	1e-34
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	8e-28
cd00828	407	cd00828, elong_cond_enzymes, "elongating" condensi	2e-26
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	7e-24
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	3e-18
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	4e-18
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	1e-16
COG3321	1061	COG3321, COG3321, Polyketide synthase modules and	9e-13
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	6e-12
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	4e-11
PRK09116	405	PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei	1e-09
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	5e-08
PRK05952	381	PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei	1e-07
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	1e-05
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	1e-04
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	2e-04
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	3e-04
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	3e-04
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	5e-04
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	0.001
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	0.002

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  326 bits (836), Expect = e-109
 Identities = 137/236 (58%), Positives = 186/236 (78%), Gaps = 1/236 (0%)

Query: 32  SKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFH 91
           ++  ++       GK +A++  Q EK++   K    K+RR+VVTG+G V+PLG D  +F+
Sbjct: 92  NRNQRRRNRAARSGKAMAVA-VQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFY 150

Query: 92  TSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKA 151
            +LLEGV+GIS+I+ FDCS+FPTRIA EIKS ST GW++PK++K+ DK+++Y L AGKKA
Sbjct: 151 NNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKA 210

Query: 152 LVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMA 211
           L D GITE V  ELDK++CGV+IGSAMGG++V ND  EA+++SY+KM+PF +P++ TNM 
Sbjct: 211 LADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMG 270

Query: 212 SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           SA+LAMDLGW GP+YSISTACA+SN+ ILNA +HII+G+ D+MLCGGSD  IIP G
Sbjct: 271 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIG 326

Length = 540

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  225 bits (575), Expect = 1e-71
 Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLGAVTPLG+    F  +LL G +GI  I  FD S FP+RIA E+       ++
Sbjct: 1   RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D++  +AL A ++AL DAG+      ELD  R GV+IGS +GGL  + + + 
Sbjct: 61  DRKELRRMDRFAQFALAAAEEALADAGLDP---EELDPERIGVVIGSGIGGLATIEEAYR 117

Query: 190 AIK-VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           A+     +++SPF++P +L NMA+  +A+ LG  GP+Y++STACAS  ++I +A   I  
Sbjct: 118 ALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRL 177

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G  D+++ GG++ +I P  
Sbjct: 178 GRADVVIAGGAEALITPLT 196

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  207 bits (530), Expect = 8e-65
 Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGAVTPLG+    F  +LL G +GI  I  FD S+ P +IA E+K      +I
Sbjct: 1   RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K A++ D+++ YAL A K+A+ D+G+  +   E D  R GVIIGS +GGL  + +   
Sbjct: 61  DKKEARRMDRFIQYALAAAKEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHI 117

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     +++SPF+IP S+ NMA+  +++  G  GP++++ TACA+  ++I +A   I +
Sbjct: 118 VLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQR 177

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           GD D+M+ GG++  I P G
Sbjct: 178 GDADVMIAGGAEAAITPLG 196

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  195 bits (498), Expect = 6e-60
 Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---- 125
           +RIVVTG+GAV+PLG     F   LL G +GI  +  F   +  T+I  ++  L+     
Sbjct: 4   KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEA 63

Query: 126 ----GGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL 181
                 ++ PK  +K D+++++A+ A K+AL  AG         D+ R   IIGS +GG 
Sbjct: 64  GFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPD--TLEDRERTATIIGSGVGGF 121

Query: 182 RVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
             + +    +     +++SPF IP  LTNMA+  +++  G+ GP  +  TACA+   +I 
Sbjct: 122 PAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181

Query: 241 NATSHIIKGDTDIMLCGGSDGMIIPSG 267
           +A   I  G+ D+ +CGG++  I    
Sbjct: 182 DAARLIRSGEADVAVCGGTEAAIDRVS 208

Length = 424

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  191 bits (487), Expect = 2e-58
 Identities = 77/199 (38%), Positives = 123/199 (61%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGAV+PLG+D      +LL G +GI  I  FD S+   +IA E+K  +   ++
Sbjct: 2   RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYM 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K A++ D+++ Y + A K+A+ DAG+      E +  R GVIIGS +GGL  + +   
Sbjct: 62  SRKEARRMDRFIQYGIAAAKQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHI 118

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     +++SPF++P ++ NMA+  +++  G  GP++SI TACA+  ++I +A   I  
Sbjct: 119 TLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAY 178

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           GD D+M+ GG++  I P G
Sbjct: 179 GDADVMVAGGAEAAITPLG 197

Length = 411

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  169 bits (431), Expect = 4e-50
 Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 7/200 (3%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLG V+ LG+       +LL G +GI  I  FD S    +IA EIK L     I
Sbjct: 3   RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDLDD--QI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           + K  +  D++   A+VA  +AL DAG+           R GV IGS +GGL  +    +
Sbjct: 61  AKKERRFMDRFSQLAVVAAVEALEDAGLDN---ELNVDMRVGVAIGSGIGGLEDIEFDLD 117

Query: 190 AI--KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A+  +   K++SPF +P  L N+A+  +A+  G  GP+Y+  TACA+  ++I +A   I 
Sbjct: 118 ALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177

Query: 248 KGDTDIMLCGGSDGMIIPSG 267
            G  D+++ GG++  I P G
Sbjct: 178 LGKADVVIAGGAEAAITPLG 197

Length = 412

>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain

 Score =  143 bits (363), Expect = 7e-42
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 18/209 (8%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             + +TG+G   P G     F   LL G   I +    D S    P+R+A EI       
Sbjct: 2   EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA-DLSGLYPPSRVAGEIYGFDFDA 60

Query: 128 W---ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSR-CGVIIGSAMGG--- 180
               ISP+ A+  D     AL A  +AL DAG+       L  S   GV +GS  G    
Sbjct: 61  AFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPA---SLRGSDRTGVFVGSGSGDYAE 117

Query: 181 LRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
           L+ L+          +++SP+     + ++A+  ++  LG  GPS ++ TAC+SS  ++ 
Sbjct: 118 LQALDSA-----GGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVALH 172

Query: 241 NATSHIIKGDTDIMLCGGSDGMIIPSGTV 269
            A   I +G+ D+ L GG +  + P G  
Sbjct: 173 AAVRSIRRGECDLALAGGVEAPLTPGGFA 201

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  138 bits (349), Expect = 3e-38
 Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 12/203 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTG+G +  LG +      ++  G  GI  I  FD S+FP +IA EI        +
Sbjct: 2   KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
            PK  KKAD+++   L A ++A+ DAG   +   ELD  R GV   S +GGL  +    E
Sbjct: 62  DPKEVKKADRFIQLGLKAAREAMKDAGFLPE---ELDAERFGVSSASGIGGLPNI----E 114

Query: 190 AIKVSY-----KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
              +       +K+SPF+IP +L NM    ++++ G  GP+ S  TACA+  ++I+ A  
Sbjct: 115 KNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVK 174

Query: 245 HIIKGDTDIMLCGGSDGMIIPSG 267
            I+ G  D ML  G++  I P G
Sbjct: 175 TIMLGGADKMLVVGAESAICPVG 197

Length = 406

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  134 bits (339), Expect = 7e-37
 Identities = 73/200 (36%), Positives = 121/200 (60%), Gaps = 4/200 (2%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+G ++P+G+       +LL G +GI +I+ FD + F TR A  +K  +   +
Sbjct: 3   KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEY 62

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +S K A+K D ++ Y + AG +AL D+G+      E +  R GV IGS +GGL ++  G 
Sbjct: 63  MSKKDARKMDLFIQYGIAAGIQALDDSGLE---VTEENAHRIGVAIGSGIGGLGLIEAGH 119

Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           +A ++   +K+SPF++P ++ NM +  L++  G  GP+ +ISTAC +  ++I +A   I 
Sbjct: 120 QALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179

Query: 248 KGDTDIMLCGGSDGMIIPSG 267
            GD D M+ GG++    P G
Sbjct: 180 YGDADAMVAGGAEKASTPLG 199

Length = 414

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score =  129 bits (325), Expect = 1e-34
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 20/204 (9%)

Query: 79  AVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE----------------FPTRIAAEIKS 122
            VTPLG  A     +L+ G +GI  +  F                     P +IAAE+  
Sbjct: 1   VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                       K+  +   +A+ A ++AL DA +   +  E D+ R GV IGS +G L 
Sbjct: 61  SEFDPSDFAP-TKRESRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGSLA 117

Query: 183 VLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            L D  + + +  + ++SP++IP  L NMA+ ++A+     GPS S  TACA+  + I  
Sbjct: 118 DLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGE 177

Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
           A   I  G+ DIM+CGG++  I P
Sbjct: 178 AFRWIKYGEADIMICGGTEASITP 201

Length = 421

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score =  110 bits (276), Expect = 8e-28
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 30/217 (13%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGI--------------SDIQGFDCSEFPTR 115
           RR+VVTGLG VTPLG         L+ G  G+               + Q +   + P+R
Sbjct: 6   RRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSR 65

Query: 116 IAAEIKSLSTGG------WISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDK 167
           +AA +   +  G      W++   ++ + +++ YAL A  +AL DA    +E       K
Sbjct: 66  VAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDE----AK 118

Query: 168 SRCGVIIGSAMGGLR-VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY 226
            R GV IG  +G +  +L       +   +++SPF++P  L NMA+  +++  G+ GP++
Sbjct: 119 ERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNH 178

Query: 227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
           +  TACA+  +SI +A   I  GD D+M+ GG++  I
Sbjct: 179 AAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSI 215

Length = 437

>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

 Score =  106 bits (266), Expect = 2e-26
 Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 19/200 (9%)

Query: 70  RRIVVTGLGAVTPLGDDAHL---FHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTG 126
            R+V+TG+G V+P G+       F  +L EG +GI+ +     S F   +A +I      
Sbjct: 1   SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIP----T 55

Query: 127 GWISPKIAKK---ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRV 183
           G I    AK+    D+  + ALVA ++AL DAGIT     E+  S  GV++GS MGGLR 
Sbjct: 56  GDIPGWDAKRTGIVDRTTLLALVATEEALADAGIT--DPYEVHPSEVGVVVGSGMGGLRF 113

Query: 184 LNDGFEAIKVSYKKMSPFYIPY--SLTNMASAVLAMDL-GWTGPSYSISTACASSNYSIL 240
           L  G +      + ++P+  P      N  +  + + L    GP  +   ACA++  ++ 
Sbjct: 114 LRRGGKLD---ARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALD 170

Query: 241 NATSHIIKGDTDIMLCGGSD 260
            A   I  G  DI++ GG +
Sbjct: 171 LAVEAIRSGKADIVVVGGVE 190

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 99.4 bits (248), Expect = 7e-24
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TGLG V+ +G++      SL EG +GI+    F      +++   +K L   G I
Sbjct: 2   RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             K+ +       YA +A ++A+ DAG++E QVS      R G+I GS  G  R   +  
Sbjct: 61  DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNP----RTGLIAGSGGGSTRNQVEAA 116

Query: 189 EAIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           +A++     K++ P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I
Sbjct: 117 DAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQI 176

Query: 247 IKGDTDIMLCGG 258
             G  DI+  GG
Sbjct: 177 QLGKQDIVFAGG 188

Length = 406

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 31/218 (14%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEFPTRIAAEIKSLSTGGW 128
            I + G+    P   D   F  +LLEG   IS+I    +D   +        K+ +  G 
Sbjct: 2   PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG 61

Query: 129 --------------ISPKIAKKAD---KYLIYALVAGKKALVDAGITEQVSGELDKSRCG 171
                         ISP+ A+  D   + L   L    +AL DAG + +    L  SR G
Sbjct: 62  FLDDVDAFDAAFFGISPREAEAMDPQQRLL---LEVAWEALEDAGYSPE---SLAGSRTG 115

Query: 172 VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTA 231
           V +G++      L            ++  +    +     +  ++      GPS ++ TA
Sbjct: 116 VFVGASSSDYLELLARDPD------EIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTA 169

Query: 232 CASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTV 269
           C+SS  ++  A   +  G+ D+ L GG + ++ P   V
Sbjct: 170 CSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFV 207

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 83.2 bits (206), Expect = 4e-18
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 17/199 (8%)

Query: 72  IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGGWI 129
           +VVTG+   T L  DA      LL+G +GI  +      EF  P RI   +         
Sbjct: 14  VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEF----- 68

Query: 130 SPKIAKKADKYLIY----ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLN 185
             ++ +   + + Y    + V G++   +AG     S E+D +R  V IG+ +G    L 
Sbjct: 69  DHQLTRVELRRMSYLQRMSTVLGRRVWENAG-----SPEVDTNRLMVSIGTGLGSAEELV 123

Query: 186 DGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
             ++ ++    + +SP  +   + N  +A + ++        +  +ACAS + +I  A  
Sbjct: 124 FAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWR 183

Query: 245 HIIKGDTDIMLCGGSDGMI 263
            I+ G+ DI +CGG +  I
Sbjct: 184 QIVLGEADIAICGGVETRI 202

Length = 418

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 78.6 bits (194), Expect = 1e-16
 Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR VVTG+G V P G     +  ++L+G +G+  I  FD S +P R+A E+        +
Sbjct: 1   RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             ++  + D+    AL A   AL DAG+       L     GV+  SA GG        +
Sbjct: 61  PGRLLPQTDRMTRLALAAADWALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQ 117

Query: 190 AI------KVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
            +       VS Y+  + FY       + +  +++  G  GPS  +    A    ++  A
Sbjct: 118 KLWSKGPRHVSAYQSFAWFYA------VNTGQISIRHGMRGPSGVVVAEQAGGLDALAQA 171

Query: 243 TSHIIKGDTDIMLCGGSDGMIIPSGTV 269
              + +G T +++ GG D  + P G V
Sbjct: 172 RRLVRRG-TPLVVSGGVDSALCPWGWV 197

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 67.9 bits (166), Expect = 9e-13
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 24/172 (13%)

Query: 101 ISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQ 160
           + D+  FD   F                ISP+ A+  D      L    +AL DAGI   
Sbjct: 67  LDDVDDFDALFFG---------------ISPREAEAMDPQQRLLLEVAWEALEDAGIYP- 110

Query: 161 VSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG 220
               L  S  GV  G+++    +L    +  +  Y          + +++A+  ++  LG
Sbjct: 111 --DSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITG------NSSSVAAGRISYVLG 162

Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKA 272
            +GPS ++ TAC+SS  ++  A   +  G+ D+ L GG + ++ P  +   +
Sbjct: 163 LSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFS 214

Length = 1061

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 64.6 bits (157), Expect = 6e-12
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPF 201
           I    A ++A+ DAG++ +          GV++G+  G  R    G +A++     + P+
Sbjct: 13  ILGFEAAERAIADAGLSREY---QKNPIVGVVVGTGGGSPRFQVFGADAMR----AVGPY 65

Query: 202 YIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG 261
            +  ++   AS  +A  LG  GP+Y +S ACA S +++  A   +  G  DI+L GGS+ 
Sbjct: 66  VVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEE 125

Query: 262 MIIPSGTVNKA 272
           +  P      A
Sbjct: 126 LAAPMDCEFDA 136

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 21/201 (10%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGI--------SDIQGFDCSEFPTRIAAEIKS 122
            +VVTG+G V+ +G     F  +LL G                          I AE+ S
Sbjct: 3   EVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDS 62

Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           L+    +  K+ ++A      AL A ++A  DA +     G +D  R G+++G +    R
Sbjct: 63  LALPERLDAKLLRRASLSAQAALAAAREAWRDAAL-----GPVDPDRIGLVVGGSNLQQR 117

Query: 183 VLNDGFEAIKVSYKKMSPFYIP-YSLTNMAS---AVLAMDLGWTGPSYSISTACASSNYS 238
                 E     Y+    F  P Y L+ M +    + +   G  G  +++  A AS   +
Sbjct: 118 EQALVHET----YRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLA 173

Query: 239 ILNATSHIIKGDTDIMLCGGS 259
           ++ A   +  G  D  +  G+
Sbjct: 174 VIQAARLVQSGSVDACIAVGA 194

Length = 410

>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 20/199 (10%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC-SEFPTRIAAEIKSLSTGGW 128
           RR+VVTG+G VT LG+D       L  G   +  +  +D      TR+AA I        
Sbjct: 2   RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL------- 181
            + K  +   +  + A  A + AL DAG+       L   R G+  GS+ G         
Sbjct: 62  YTRKKIRSMGRVSLMATRASELALEDAGLLGDPI--LTDGRMGIAYGSSTGSTDPIGAFG 119

Query: 182 RVLNDG-FEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
            +L +G    I   +Y +M P        +  +  + +  G  G     S+AC S +  I
Sbjct: 120 TMLLEGSMSGITATTYVRMMP--------HTTAVNVGLFFGLKGRVIPTSSACTSGSQGI 171

Query: 240 LNATSHIIKGDTDIMLCGG 258
             A   I  G   +ML GG
Sbjct: 172 GYAYEAIKYGYQTVMLAGG 190

Length = 405

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score = 52.8 bits (126), Expect = 5e-08
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 167 KSRCGVIIGSAMGGLRVLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWT 222
           + R   IIG+ +GG   +     A++ S     K++SPF +P  L N+A+  +++   + 
Sbjct: 25  QERTATIIGAGIGGFPAIA---HAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK 81

Query: 223 GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
           GP  +  TACA+   +I +A   I   + D+ LCGG++ +I
Sbjct: 82  GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVI 122

Length = 342

>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 52/205 (25%), Positives = 78/205 (38%), Gaps = 38/205 (18%)

Query: 71  RIVVTGLGAVTPLGDDAHLFHT--SLLEGVTGISDIQGFDCSEFPTR----IAAEIKSLS 124
           ++VVTG+G V+ LGD   L  +   LL+G +GI   Q F   E P      I  +  SL 
Sbjct: 3   KVVVTGIGLVSALGD---LEQSWQRLLQGKSGIKLHQPF--PELPPLPLGLIGNQPSSLE 57

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
                           L   +V    AL DAG+T  ++       CGV+IGS+ G     
Sbjct: 58  D---------------LTKTVV--TAALKDAGLTPPLT------DCGVVIGSSRGCQGQW 94

Query: 185 NDGFEAIKVSYKKMSPFYIP----YSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
                 +                  +L + A+   A  +G  GP  +   ACA+  ++I 
Sbjct: 95  EKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIA 154

Query: 241 NATSHIIKGDTDIMLCGGSDGMIIP 265
                I  G    ++ G  +  I P
Sbjct: 155 QGVELIQTGQCQRVIAGAVEAPITP 179

Length = 381

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 204 PYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSD 260
             SL +   A L    G +GP+Y+ISTAC+SS     +A   +  G  D  + GG D
Sbjct: 136 LGSLADFLRAYL----GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVD 188

Length = 392

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 26/119 (21%)

Query: 146 VAGKKALVDAGITEQVSGELDKSRC-GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIP 204
            A   AL+DAG+ E+   ++D +    VI+G  +                          
Sbjct: 28  EALGAALIDAGL-ERAPADVDAADVDDVILGCVLQAG----------------------- 63

Query: 205 YSLTNMA-SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
               N+A  A LA  L  + P+ +++ ACAS   ++  A   I  G+ D++L GG + M
Sbjct: 64  EQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKM 122

Length = 392

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 213 AVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
           A L   L  + P+ +++  C S   ++  A   I  G+ D+++ GG + M
Sbjct: 65  AALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESM 114

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 62  TKHKEPKERRIV-VTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEI 120
           T +++   R IV VTG+G VT LG        +L  G +GI  I  F      TRIA  +
Sbjct: 2   TAYRDHLGRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV 61

Query: 121 KSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGI 157
             L    + +  +++        A +A ++AL  AGI
Sbjct: 62  DFLPESPFGASALSEA------LARLAAEEALAQAGI 92

Length = 425

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 213 AVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
           A L   L  + P+Y+++  CAS   +++ A   I  G+ D+++ GG + M
Sbjct: 64  AALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESM 113

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 213 AVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
           A L   +  + P+ +I+  C S   ++  A   I  GD DI++ GG + M
Sbjct: 67  AALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESM 116

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM-IIPSGTVNKA 272
           VL   +     +YS+S ACA+S  ++ N    I+ G  DI + GG+D   ++P G V+K 
Sbjct: 73  VLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIG-VSKK 131

Query: 273 VA 274
           +A
Sbjct: 132 LA 133

Length = 428

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 211 ASAVLAMDLG-WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           A+  LA  LG   GP+YS++ ACA+   ++  A   +  G  DI+L GGS+  +   G
Sbjct: 46  AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEEFVFGDG 103

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	100.0
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	100.0
COG3321	1061	Polyketide synthase modules and related proteins [	100.0
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
cd00832	399	CLF Chain-length factor (CLF) is a factor required	100.0
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	100.0
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	100.0
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	100.0
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	100.0
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	100.0
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	100.0
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	100.0
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	100.0
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	100.0
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.97
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.97
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.97
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	99.91
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.73
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.66
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	99.38
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.29
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.29
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.26
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.26
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.25
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.24
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.23
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.23
PRK09051	394	beta-ketothiolase; Provisional	99.23
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	99.23
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.21
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.21
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.21
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.21
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.2
PLN02287	452	3-ketoacyl-CoA thiolase	99.2
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.2
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.2
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.19
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.18
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.18
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.16
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.16
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.16
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.12
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.1
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.1
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.08
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.06
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.05
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.03
PRK08256	391	lipid-transfer protein; Provisional	99.02
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	98.99
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	98.97
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.97
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	98.95
PRK06157	398	acetyl-CoA acetyltransferase; Validated	98.95
PRK06059	399	lipid-transfer protein; Provisional	98.95
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	98.92
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	98.92
PLN02644	394	acetyl-CoA C-acetyltransferase	98.88
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	98.88
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	98.85
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	98.85
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	98.84
PRK05790	393	putative acyltransferase; Provisional	98.84
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	98.82
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	98.8
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	98.79
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.78
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	98.76
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	98.76
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	98.75
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.74
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	98.73
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	98.73
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	98.72
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.7
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	98.68
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	98.67
PRK08304	337	stage V sporulation protein AD; Validated	98.66
PLN03172	393	chalcone synthase family protein; Provisional	98.65
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	98.65
PLN03169	391	chalcone synthase family protein; Provisional	98.63
PLN03168	389	chalcone synthase; Provisional	98.62
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	98.58
PLN03170	401	chalcone synthase; Provisional	98.56
PRK06840	339	hypothetical protein; Validated	98.56
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	98.56
PRK04262	347	hypothetical protein; Provisional	98.55
PLN03173	391	chalcone synthase; Provisional	98.51
PLN03171	399	chalcone synthase-like protein; Provisional	98.49
PRK06158	384	thiolase; Provisional	98.47
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	98.46
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.44
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	98.42
PRK12404	334	stage V sporulation protein AD; Provisional	98.37
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	98.36
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.35
PRK07855	386	lipid-transfer protein; Provisional	98.34
PRK08257	498	acetyl-CoA acetyltransferase; Validated	98.24
PLN02932	478	3-ketoacyl-CoA synthase	98.22
PLN02192	511	3-ketoacyl-CoA synthase	98.13
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	98.13
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	98.13
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	98.11
PLN02377	502	3-ketoacyl-CoA synthase	98.0
PLN02854	521	3-ketoacyl-CoA synthase	97.96
PLN02577	459	hydroxymethylglutaryl-CoA synthase	97.95
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	97.88
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	97.81
PRK07937	352	lipid-transfer protein; Provisional	97.67
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	97.34
PLN00415	466	3-ketoacyl-CoA synthase	97.31
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	97.22
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	97.17
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	96.87
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	96.79
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	96.74
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	95.88
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	94.59
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	94.59

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=100.00  E-value=2.3e-41  Score=321.75  Aligned_cols=242  Identities=57%  Similarity=1.013  Sum_probs=207.6

Q ss_pred             ccccccccccccCCCcccccccccchhhhhccCCCCCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCC
Q 023909           32 SKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE  111 (275)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~  111 (275)
                      ++++++..+...++...++. .++.........+.+..++|||||||+++|.|.++++||++|.+|+++|.++++|+...
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~  170 (540)
T PLN02787         92 NRNQRRRNRAARSGKAMAVA-VQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQ  170 (540)
T ss_pred             ccccccccccCCCcccceec-cCcccccccccCCCCCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhh
Confidence            44566777777776655543 33332222222222445799999999999999999999999999999999999999999


Q ss_pred             CCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH
Q 023909          112 FPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI  191 (275)
Q Consensus       112 ~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~  191 (275)
                      ++.+++|+|++|+...++++++.++||+++++++.++++||+|||++++.++.+++.|+|||+|++.+++..+.+.+..+
T Consensus       171 ~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l  250 (540)
T PLN02787        171 FPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEAL  250 (540)
T ss_pred             CCccccccccccChhhcCCHHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHH
Confidence            99999999999998888999999999999999999999999999997643345678899999999999988877777766


Q ss_pred             HhccCCCCCcccccccchHHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHH
Q 023909          192 KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNK  271 (275)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf  271 (275)
                      ......++|+.++..+.+..+++|++.||++||+++|++||+||++||+.|+++|++|+||+|||||+|..++|..+.+|
T Consensus       251 ~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f  330 (540)
T PLN02787        251 RISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGF  330 (540)
T ss_pred             hhccccCCcchhhhhcccHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHH
Confidence            55667788988888888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhc
Q 023909          272 AVA  274 (275)
Q Consensus       272 ~~l  274 (275)
                      ..+
T Consensus       331 ~~~  333 (540)
T PLN02787        331 VAC  333 (540)
T ss_pred             HHH
Confidence            864

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=5.2e-41  Score=312.46  Aligned_cols=204  Identities=36%  Similarity=0.638  Sum_probs=190.8

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      ..++|||||||+++|.|.++++||++|.+|+++|+++++|+...++..++|++++||+.+|+++++.++||+++++++.+
T Consensus         2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a   81 (414)
T PRK08722          2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAA   81 (414)
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      +++||+||||++.   +.+..|+|||+|++.+++...++.+..+ ..+...++++.++..++|.++++|++.||++||++
T Consensus        82 ~~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~  158 (414)
T PRK08722         82 GIQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNI  158 (414)
T ss_pred             HHHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCcc
Confidence            9999999999743   3567899999999999998888887776 66677889999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|++||+||+.||++|+++|++|+||+|||||+|..++|..+.+|+.+
T Consensus       159 ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~  206 (414)
T PRK08722        159 AISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAA  206 (414)
T ss_pred             ccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999864

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.3e-41  Score=291.71  Aligned_cols=206  Identities=39%  Similarity=0.636  Sum_probs=198.9

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ++||||||||+++|+|.+++++|++|.+|+++|+.++.++...+++..+|.|+.|+...|+++...++|+...+|++.++
T Consensus        23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa  102 (440)
T KOG1394|consen   23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA  102 (440)
T ss_pred             ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      .|||+|||+.+..+++.+..++||.||+++++++.+.+..+.+ .++.++++|++++..+.|+.+++|++.+||+||+.+
T Consensus       103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs  182 (440)
T KOG1394|consen  103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS  182 (440)
T ss_pred             HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence            9999999999877778889999999999999999888877777 888999999999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++|||++|..+|..|.+.|+.|++|++|+||+|.+++|..+.||.++
T Consensus       183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~  229 (440)
T KOG1394|consen  183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRA  229 (440)
T ss_pred             hHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHH
Confidence            99999999999999999999999999999999999999999999875

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=5.2e-41  Score=340.51  Aligned_cols=195  Identities=25%  Similarity=0.341  Sum_probs=173.7

Q ss_pred             cEEEEeccccCCCCCCHHHHHHHHHcCCCceeeC--CCCCCCCC-----------CcceeeecCC---CCCCCC-CCHHH
Q 023909           71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEF-----------PTRIAAEIKS---LSTGGW-ISPKI  133 (275)
Q Consensus        71 ~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~--~~~~~~~~-----------~~~~~g~i~~---fd~~~~-i~~~~  133 (275)
                      .|+|+||+|+||+++++++||++|.+|+++|+++  +||+++.+           +.++||++++   ||+.|| |+|+|
T Consensus         5 ~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrE   84 (1061)
T COG3321           5 PIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPRE   84 (1061)
T ss_pred             cEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHH
Confidence            3999999999999999999999999999999999  67887765           4789999874   999999 99999


Q ss_pred             HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 023909          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (275)
Q Consensus       134 ~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (275)
                      +..|||||||+|+++|+|||||||.++.   +.+..||||+|.+..+|......     ... ...++...++..+++++
T Consensus        85 A~~mDPQqRllLe~aw~AlEdAG~~~~~---l~g~~tgV~~g~~~~~y~~~~~~-----~~~-~~~~~~~~g~~~~~~a~  155 (1061)
T COG3321          85 AEAMDPQQRLLLEVAWEALEDAGIYPDS---LRGSATGVFAGASVADYLLLLLA-----DDE-AEPEYAITGNSSSVAAG  155 (1061)
T ss_pred             HHhcCchHhHHHHHHHHHHHHcCCCccc---cCCcceEEEEeeccCcccccccc-----ccc-cccceecccchhhHHHH
Confidence            9999999999999999999999999865   56689999999998877532211     111 55667777888899999


Q ss_pred             HHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       214 ~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ||||.|||+||+++|+|+|||||+|||+||+.|++|+||+||+|||++.++|.....|++.
T Consensus       156 Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~  216 (1061)
T COG3321         156 RISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAG  216 (1061)
T ss_pred             HHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecc
Confidence            9999999999999999999999999999999999999999999999999999988887653

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.5e-39  Score=301.69  Aligned_cols=206  Identities=33%  Similarity=0.603  Sum_probs=189.4

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCC--------CCCCCCCCHHHHhhCC
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS--------LSTGGWISPKIAKKAD  138 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~--------fd~~~~i~~~~~~~~d  138 (275)
                      |.+++|+|||||+++|.|.++++||++|++|+++++++++|+...++..++|+|++        ||+.+|+++++.++||
T Consensus         1 m~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d   80 (424)
T PRK06333          1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMD   80 (424)
T ss_pred             CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcC
Confidence            45689999999999999999999999999999999999988888899999999987        8888889999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAM  217 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (275)
                      |+++|++.++++||+||||+++.+  .+..|+|||+|++.+++..+++.+..+ ..+...++++.+...+.|.++++|++
T Consensus        81 ~~~~l~~~aa~~Al~dAgl~~~~~--~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  158 (424)
T PRK06333         81 RFILFAMAAAKEALAQAGWDPDTL--EDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI  158 (424)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcccc--CCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHH
Confidence            999999999999999999985432  157899999999999998888877776 66777888888899999999999999


Q ss_pred             HhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          218 DLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       218 ~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      .|||+||+++|+++|+||+.||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       159 ~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~  215 (424)
T PRK06333        159 RYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAA  215 (424)
T ss_pred             HhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999999999998754

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=4.3e-39  Score=299.97  Aligned_cols=203  Identities=39%  Similarity=0.691  Sum_probs=189.7

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|+|||||+++|.|.++++||++|++|+++++++++|+...++..++|+|++||++.++++++.++|||+++|++.++
T Consensus         1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa   80 (411)
T PRK07314          1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA   80 (411)
T ss_pred             CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999899999999999999988899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+||||+++   ++++.++|||+|++.+++...++.+..+ ..+...+.|+.+.....+.++++|++.||++||+++
T Consensus        81 ~~Al~dAGl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t  157 (411)
T PRK07314         81 KQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHS  157 (411)
T ss_pred             HHHHHHcCCCcc---cCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCcccc
Confidence            999999999854   4678999999999999998888888777 666677888888888999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |+++|+||+.||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       158 v~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~  204 (411)
T PRK07314        158 IVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAA  204 (411)
T ss_pred             chhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999988654

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=100.00  E-value=9.3e-39  Score=296.28  Aligned_cols=201  Identities=25%  Similarity=0.424  Sum_probs=185.8

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++|||||||+++|.|.++++||++|.+|+++|+++++|+...++..++|++++||+.+++++++.++|||+++|++.+++
T Consensus         1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~   80 (399)
T cd00832           1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD   80 (399)
T ss_pred             CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999988899999999999998878999999999999999999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v  228 (275)
                      +||+||||+++   ++++.|+||++|++.+++...+..+..+ ..+...++++.+...+.+.++++|++.||++||+++|
T Consensus        81 eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti  157 (399)
T cd00832          81 WALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV  157 (399)
T ss_pred             HHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence            99999999854   3667899999999999998777777666 5566778888888888899999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|+||+.||++|+++|++|+ |++||||+|..++|..+.+|.++
T Consensus       158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~  202 (399)
T cd00832         158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSS  202 (399)
T ss_pred             cchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhc
Confidence            9999999999999999999999 99999999999999999998764

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=100.00  E-value=9.3e-39  Score=278.97  Aligned_cols=199  Identities=37%  Similarity=0.607  Sum_probs=160.6

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCC-CCCCCCC---CcceeeecCC----------CCCCCC-CCHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-GFDCSEF---PTRIAAEIKS----------LSTGGW-ISPKI  133 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~---~~~~~g~i~~----------fd~~~~-i~~~~  133 (275)
                      |++|||||||+++|+|.++++||++|.+|++++++++ +|+...+   +....+.++.          ||...+ +++++
T Consensus         1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (254)
T PF00109_consen    1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE   80 (254)
T ss_dssp             -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred             CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence            6799999999999999999999999999999999987 7877776   5666676654          566666 77888


Q ss_pred             HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCC-eEEEEEeecCCChhhHHHHHHHH-Hhc--cCCCCCcccccccch
Q 023909          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKS-RCGVIIGSAMGGLRVLNDGFEAI-KVS--YKKMSPFYIPYSLTN  209 (275)
Q Consensus       134 ~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~-~~gv~vG~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~  209 (275)
                      .++|||+++|++.++++||+|||+.++.   .+.. |+|||+|++.+++    +.+..+ ...  .....|+.+...++|
T Consensus        81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~~---~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~  153 (254)
T PF00109_consen   81 ARRMDRQSRLALAAAREALEDAGLDPDD---LDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN  153 (254)
T ss_dssp             HHTS-HHHHHHHHHHHHHHHHHTSTGGG---HTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred             hhhhhhhhhHHHHHhhhhcccccccccc---cccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence            8999999999999999999999998543   3344 5999999998844    334444 232  355566445556899


Q ss_pred             HHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       210 ~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      .++++|++.||++||+++|+++|+||+.||+.|+++|++|++|+|||||+|..++|..+.+|+++
T Consensus       154 ~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~  218 (254)
T PF00109_consen  154 SAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSAL  218 (254)
T ss_dssp             HHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHT
T ss_pred             ccccchhhhcCCCCccccccccccccccccchhcccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999988999999999876

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.7e-38  Score=292.57  Aligned_cols=203  Identities=25%  Similarity=0.334  Sum_probs=183.5

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCC-CCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC-SEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~-~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      |++|||||||+++|.|.++++||++|.+|+++|+++++|+. ..++.++++++++||...++++++.++||+.++|++.+
T Consensus         1 m~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a   80 (405)
T PRK09116          1 MRRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA   80 (405)
T ss_pred             CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence            37999999999999999999999999999999999998875 57889999999999988778899999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      +++||+|||+..+  ...+++|+||++|++.++....+++...+ ..+...++++.+...++|.++++|++.|+++||++
T Consensus        81 a~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~  158 (405)
T PRK09116         81 SELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVI  158 (405)
T ss_pred             HHHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCcc
Confidence            9999999999532  12456899999999999888777777766 55566788888888899999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|+++|+||++||++|+++|++|+||+|||||+|. ++|..+.+|+.|
T Consensus       159 ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l  205 (405)
T PRK09116        159 PTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTL  205 (405)
T ss_pred             cccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHh
Confidence            99999999999999999999999999999999998 788888888875

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.3e-37  Score=289.48  Aligned_cols=203  Identities=35%  Similarity=0.582  Sum_probs=189.4

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|+|||||+++|.|.++++||++|++|+++|+++++|+...++..++|+|++||+..++++++.+++|+.++|++.++
T Consensus         1 m~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa   80 (406)
T PRK08439          1 MKRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA   80 (406)
T ss_pred             CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999899999999999999988899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+|||++++   +++..++||++|++.+++...++.+..+ ..+.+.++|+.++..+.|.++++|++.||++||+++
T Consensus        81 ~~AL~dAGl~~~---~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~  157 (406)
T PRK08439         81 REAMKDAGFLPE---ELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLS  157 (406)
T ss_pred             HHHHHHcCCCcc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCccc
Confidence            999999999854   3667899999999999988877776665 667778899999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++++|+|+++||++|+++|++|++|++||||+|..++|..+.+|.++
T Consensus       158 ~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~  204 (406)
T PRK08439        158 SVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAM  204 (406)
T ss_pred             cccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999764

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=100.00  E-value=3.2e-38  Score=338.15  Aligned_cols=203  Identities=21%  Similarity=0.327  Sum_probs=174.1

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeC--CCCCCCCC-----------CcceeeecC--CCCCCCC-CCH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI--QGFDCSEF-----------PTRIAAEIK--SLSTGGW-ISP  131 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~--~~~~~~~~-----------~~~~~g~i~--~fd~~~~-i~~  131 (275)
                      ..++|+|||||+++|+|.++++||++|.+|+++|+++  +||+...|           +++++|+|+  +||+.+| |+|
T Consensus         5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p   84 (2582)
T TIGR02813         5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPP   84 (2582)
T ss_pred             CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCH
Confidence            3468999999999999999999999999999999998  57876543           678999998  5999999 999


Q ss_pred             HHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHH-----------H----------HHHH
Q 023909          132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLN-----------D----------GFEA  190 (275)
Q Consensus       132 ~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~-----------~----------~~~~  190 (275)
                      ++++.|||+|||+|+++|+||+||||..    +++++|||||+|++.+++....           +          .+..
T Consensus        85 ~ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (2582)
T TIGR02813        85 NILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEM  160 (2582)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHH
Confidence            9999999999999999999999999963    2678999999999876542100           0          0111


Q ss_pred             H----HhccCCCCCcccccccchHHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChH
Q 023909          191 I----KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPS  266 (275)
Q Consensus       191 ~----~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~  266 (275)
                      +    ......+.+..+++.+.|++++||++.|||+||+++|++||+||++|||+||++|++|+||+|||||+|..++|.
T Consensus       161 ~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~  240 (2582)
T TIGR02813       161 LIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPF  240 (2582)
T ss_pred             hhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHH
Confidence            1    112234566678899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q 023909          267 GTVNKAVA  274 (275)
Q Consensus       267 ~~~gf~~l  274 (275)
                      .+.+|+++
T Consensus       241 ~~~~fs~~  248 (2582)
T TIGR02813       241 MYMSFSKT  248 (2582)
T ss_pred             HHHHHHhc
Confidence            99999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=100.00  E-value=2.6e-37  Score=287.42  Aligned_cols=202  Identities=41%  Similarity=0.724  Sum_probs=188.3

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++|+|||||+++|.|.++++||++|++|+++++++++|+...++..++|+|++||+.+|+++++.++|||+++|++++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~   80 (407)
T TIGR03150         1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK   80 (407)
T ss_pred             CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999998999999999999999988999999999999999999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v  228 (275)
                      +||+|||++++   +++..++|||+|++.+++...++++..+ ..+...++++.+...+.+.++++|++.||++||+++|
T Consensus        81 ~Al~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v  157 (407)
T TIGR03150        81 EAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV  157 (407)
T ss_pred             HHHHhcCCCcc---cCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence            99999999854   4678899999999999988888777766 6666778888888899999999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|+||+.||++|+++|++|+||++||||+|..++|..+.+|..+
T Consensus       158 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~  203 (407)
T TIGR03150       158 VTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAM  203 (407)
T ss_pred             ccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHh
Confidence            9999999999999999999999999999999998999998888653

FabB sequences should fall well below the noise cutoff of this model.

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.7e-37  Score=286.87  Aligned_cols=199  Identities=24%  Similarity=0.360  Sum_probs=179.2

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCC--CCCCCCcceeeecC-CCCCCCCCCHHHHhhCCHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGF--DCSEFPTRIAAEIK-SLSTGGWISPKIAKKADKYLIYAL  145 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~--~~~~~~~~~~g~i~-~fd~~~~i~~~~~~~~d~~~rl~l  145 (275)
                      +++|||||||+++|.|.++++||++|.+|+++|+++++|  +...++.+++|++. +||+  ++++++.++|||++++++
T Consensus        11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~--~~~~~~~~~~d~~~~~~l   88 (418)
T PRK07910         11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--QLTRVELRRMSYLQRMST   88 (418)
T ss_pred             CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccc--cCCHHHHhhccHHHHHHH
Confidence            589999999999999999999999999999999999765  33457788999985 4553  478999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 023909          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (275)
Q Consensus       146 ~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp  224 (275)
                      .++++||+|||+.     ..++.|+||++|++.++....+..+..+ ..+.+.++++.+...++|.++.++++.++++||
T Consensus        89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~  163 (418)
T PRK07910         89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG  163 (418)
T ss_pred             HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence            9999999999985     2567899999999999998888777776 556677888888889999999999999999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++++++|+|++.||++|+++|++|+||+|||||+|..++|..+.+|+++
T Consensus       164 ~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~  213 (418)
T PRK07910        164 VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQM  213 (418)
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999875

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=1.6e-36  Score=281.37  Aligned_cols=201  Identities=30%  Similarity=0.450  Sum_probs=180.7

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++|++ +||+..+++++..+++++..++++.++
T Consensus         1 m~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~r~~~~a~~aa   79 (406)
T PRK07967          1 MRRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNV-KLDPTGLIDRKVMRFMGDASAYAYLAM   79 (406)
T ss_pred             CCcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEc-CCChhhcCCHHHhhcCCHHHHHHHHHH
Confidence            3799999999999999999999999999999999999999889999999998 488777788888999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-H-hccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-K-VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      .+||+|||+.++   ++...|+|||+|++.+.+....+.+..+ . .+.+.++|+.++..+.+.++++|++.||++||++
T Consensus        80 ~~Al~dAGl~~~---~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~  156 (406)
T PRK07967         80 EQAIADAGLSEE---QVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNY  156 (406)
T ss_pred             HHHHHHcCCCCc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCcc
Confidence            999999999753   3567899999999988877666666555 3 5667789999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|++||+||+.||++|+++|++|+||+|||||+|. +++..+.+|+++
T Consensus       157 tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~  203 (406)
T PRK07967        157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAM  203 (406)
T ss_pred             ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHh
Confidence            99999999999999999999999999999999998 667777778754

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=100.00  E-value=1.2e-36  Score=285.16  Aligned_cols=203  Identities=32%  Similarity=0.537  Sum_probs=176.8

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCC--------------CCCCcceeeecC------CCCCC
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC--------------SEFPTRIAAEIK------SLSTG  126 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~--------------~~~~~~~~g~i~------~fd~~  126 (275)
                      +..++|||||||+++|+|.++++||++|++|+++|++++++++              ..++.+++++++      +||+.
T Consensus         3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~   82 (437)
T PLN02836          3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE   82 (437)
T ss_pred             CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence            3567999999999999999999999999999999999976542              356778888885      47766


Q ss_pred             CCCCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCccccc
Q 023909          127 GWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPY  205 (275)
Q Consensus       127 ~~i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  205 (275)
                      +|..   .+++++..+|++.++++||+||||.+..  ....+++||++|++.+++..+.+.+..+ ..+...++|+.+..
T Consensus        83 ~~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~--~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~  157 (437)
T PLN02836         83 LWLN---SRSSSRFIGYALCAADEALSDARWLPSE--DEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPR  157 (437)
T ss_pred             Hhcc---ccccCHHHHHHHHHHHHHHHHcCCCccc--ccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhh
Confidence            6532   4578999999999999999999997532  2356899999999998888777776666 55667789999999


Q ss_pred             ccchHHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          206 SLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       206 ~~~~~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      .+.|+++++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||+|..++|..+.+|.++
T Consensus       158 ~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~  226 (437)
T PLN02836        158 ILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRS  226 (437)
T ss_pred             hcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999999764

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=100.00  E-value=7.9e-36  Score=277.77  Aligned_cols=201  Identities=20%  Similarity=0.237  Sum_probs=177.2

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCC--------CCCcceeeecCCCCCCCCCCHHHHhhCCHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS--------EFPTRIAAEIKSLSTGGWISPKIAKKADKY  140 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~--------~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~  140 (275)
                      |++|||||||+++|.|.++++||++|++|+++|+++++|+..        .....+++++++|+...+++++..+++++.
T Consensus         1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~   80 (410)
T PRK07103          1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLS   80 (410)
T ss_pred             CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHH
Confidence            479999999999999999999999999999999999887654        345778999999988777888899999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      +++++.++++||+|||+.+     .+..|+|||+|++.+........+..+......+.|++....+++.++++|++.||
T Consensus        81 ~~lal~Aa~eAl~dAgl~~-----~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  155 (410)
T PRK07103         81 AQAALAAAREAWRDAALGP-----VDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG  155 (410)
T ss_pred             HHHHHHHHHHHHHhcCcCC-----CCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence            9999999999999999952     45789999999887776666665555544455667777777788889999999999


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||+++|+++|+|++.||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~  209 (410)
T PRK07103        156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSL  209 (410)
T ss_pred             CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHc
Confidence            999999999999999999999999999999999999999988999999999765

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=100.00  E-value=1.3e-35  Score=275.92  Aligned_cols=202  Identities=41%  Similarity=0.748  Sum_probs=188.4

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..++++|++||+.+.+++++.+.|||+++|++.+++
T Consensus         1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~   80 (406)
T cd00834           1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE   80 (406)
T ss_pred             CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999988888899999999999998866999999999999999999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v  228 (275)
                      +||+|||++++   +++..++|||+|++.+++...++++..+ ..+.+.++++.+.....+.++++|+..||++||+++|
T Consensus        81 ~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v  157 (406)
T cd00834          81 EALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV  157 (406)
T ss_pred             HHHHHcCCCcc---cCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence            99999999854   4678999999999999999888888877 6666778898888888899999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|+|+++||++|+++|++|+||.|||||+|...+|..+.+|.++
T Consensus       158 ~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~  203 (406)
T cd00834         158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAAL  203 (406)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhc
Confidence            9999999999999999999999999999999998889999999865

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=6.4e-35  Score=269.53  Aligned_cols=201  Identities=19%  Similarity=0.222  Sum_probs=164.9

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHH-HHhhCCHHHHHHH
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPK-IAKKADKYLIYAL  145 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~-~~~~~d~~~rl~l  145 (275)
                      +..++|||||||+++|.|.++++||++|++|+++ ..++.++...++....+   ++|...+++++ +.++||+.++|++
T Consensus         3 ~~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~~r~~~~a~   78 (398)
T PRK06519          3 MQPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVHPLP---EIDWSQQIPKRGDQRQMETWQRLGT   78 (398)
T ss_pred             CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCccccc---ccChhhcCCchhhhhccCHHHHHHH
Confidence            3467999999999999999999999999999997 22222222223333333   34444445566 7789999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHH------------HHHH-HhccCCCCCcccccccchHHH
Q 023909          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG------------FEAI-KVSYKKMSPFYIPYSLTNMAS  212 (275)
Q Consensus       146 ~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~a  212 (275)
                      .++.+||+|||+.++   ..+..|+||++|++.++.....+.            +..+ ....+.++|++++..++|.++
T Consensus        79 ~Aa~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a  155 (398)
T PRK06519         79 YAAGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLA  155 (398)
T ss_pred             HHHHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHH
Confidence            999999999999742   235679999999999987664432            2223 445667899999999999999


Q ss_pred             HHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          213 AVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       213 ~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||+|..++|..+.+|+.+
T Consensus       156 ~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~  217 (398)
T PRK06519        156 GNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELG  217 (398)
T ss_pred             HHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999865

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=100.00  E-value=9.9e-34  Score=263.54  Aligned_cols=193  Identities=33%  Similarity=0.489  Sum_probs=172.4

Q ss_pred             CcEEEEeccccCCCCCC---HHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhC---CHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDD---AHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKA---DKYLIY  143 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~---~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~---d~~~rl  143 (275)
                      .+|+|||||+++|.|.+   +++||++|.+|+++++++++|+ ..++..++|++++|+    +++++.+++   ||+++|
T Consensus         1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l   75 (407)
T cd00828           1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLL   75 (407)
T ss_pred             CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHH
Confidence            37999999999999999   9999999999999999998887 678889999999877    678888888   999999


Q ss_pred             HHHHHHHHHHHcCCCCcccCC-CCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccc--hHHHHHHHHHhC
Q 023909          144 ALVAGKKALVDAGITEQVSGE-LDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT--NMASAVLAMDLG  220 (275)
Q Consensus       144 ~l~aa~~Al~dAG~~~~~~~~-~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~ia~~~~  220 (275)
                      ++.++++||+|||+.++   + ++..++|||+|++.+++...+..+..+.   +...++.++..+.  +.++++|++.|+
T Consensus        76 ~~~aa~~Al~dAGl~~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~g  149 (407)
T cd00828          76 ALVATEEALADAGITDP---YEVHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLL  149 (407)
T ss_pred             HHHHHHHHHHhCCCCcc---ccCCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhC
Confidence            99999999999999853   3 5678999999999998877766655442   3456777777777  999999999999


Q ss_pred             C-CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 W-TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l-~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      + +||+++|+++|+|+++||++|+++|++|+||+|||||+|... |..+.+|..+
T Consensus       150 l~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~  203 (407)
T cd00828         150 SSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANM  203 (407)
T ss_pred             cCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHc
Confidence            9 999999999999999999999999999999999999999976 9999999765

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=5.2e-34  Score=262.39  Aligned_cols=201  Identities=37%  Similarity=0.598  Sum_probs=182.8

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +++|+|||+|+++|.|.+++++|++|..|++++..+++|+...+.+++++.+++|  ..++.+++.++||+.++|++.++
T Consensus         2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa   79 (412)
T COG0304           2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA   79 (412)
T ss_pred             CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence            6799999999999999999999999999999999999999999999999999988  44578888889999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCC-CCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKK-MSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      .+||+|||+..+  ...+. |+||++|++.++....+..+..+ ..+.++ ++|+.++..++++.++.++..||++||++
T Consensus        80 ~eAl~dAgl~~~--~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~  156 (412)
T COG0304          80 VEALEDAGLDNE--LNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY  156 (412)
T ss_pred             HHHHHHcCCCcc--cccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence            999999999832  12334 99999999999999877643444 455555 89999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++++||+||.+||..|+++|+.|++|++||||+|..++|..+.+|+.|
T Consensus       157 ~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am  204 (412)
T COG0304         157 TPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAM  204 (412)
T ss_pred             ChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999976

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=100.00  E-value=4.2e-32  Score=253.57  Aligned_cols=190  Identities=34%  Similarity=0.553  Sum_probs=168.5

Q ss_pred             ccCCCCCCHHHHHHHHHcCCCceeeCCCCC----------------CCCCCcceeeecC--CCCCCCCCCHHHHhhCCHH
Q 023909           79 AVTPLGDDAHLFHTSLLEGVTGISDIQGFD----------------CSEFPTRIAAEIK--SLSTGGWISPKIAKKADKY  140 (275)
Q Consensus        79 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~----------------~~~~~~~~~g~i~--~fd~~~~i~~~~~~~~d~~  140 (275)
                      +++|.|.++++||++|++|+++|+++++|+                ...++++++|+|+  +||+.+|...   .+.+++
T Consensus         1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~~---~~~~~~   77 (421)
T PTZ00050          1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAPT---KRESRA   77 (421)
T ss_pred             CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCCc---ccCCHH
Confidence            478999999999999999999999998776                5567889999998  5887766221   245999


Q ss_pred             HHHHHHHHHHHHHHcCCC-CcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHH
Q 023909          141 LIYALVAGKKALVDAGIT-EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~-~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ++|++.++++||+|||+. ++   +.+..++||++|++.+++....+.+..+ ..+...++++.++..+.|.++++|++.
T Consensus        78 ~~l~~~aa~~Al~dAGl~~~~---~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~  154 (421)
T PTZ00050         78 THFAMAAAREALADAKLDILS---EKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK  154 (421)
T ss_pred             HHHHHHHHHHHHHHcCCCccc---ccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence            999999999999999997 43   3567899999999999888777777666 667778889999999999999999999


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |||+||+++|+++|+||+.||++|+++|++|+||++||||+|..++|..+.+|+++
T Consensus       155 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~  210 (421)
T PTZ00050        155 HKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRM  210 (421)
T ss_pred             hCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998899999999875

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=100.00  E-value=6.3e-32  Score=252.14  Aligned_cols=196  Identities=26%  Similarity=0.356  Sum_probs=169.4

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCC--CCCCCC----------CCcceeeecCC---CCCCCC-CCHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ--GFDCSE----------FPTRIAAEIKS---LSTGGW-ISPKI  133 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~----------~~~~~~g~i~~---fd~~~~-i~~~~  133 (275)
                      ++|+|||||+++|.|.++++||++|.+|++++++++  +|+...          ....++|++++   ||+.+| +++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~   80 (421)
T cd00833           1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE   80 (421)
T ss_pred             CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence            379999999999999999999999999999999984  566442          35678888876   677767 89999


Q ss_pred             HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 023909          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (275)
Q Consensus       134 ~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (275)
                      .+.+|++++|+++++++||+|||+.++   +++..++||++|+..+++.      .........++++.+.....+..++
T Consensus        81 ~~~~~~~~~l~~~aa~~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~  151 (421)
T cd00833          81 AEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFVGASSSDYL------ELLARDPDEIDAYAATGTSRAFLAN  151 (421)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHcCCCch---hcCCCCceEEeCcCHHHHH------HHHhhcccccCcccccCcchHHHHH
Confidence            999999999999999999999999854   3578899999999865332      1123333457888888888899999


Q ss_pred             HHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       214 ~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++++.+|++||+++++++|+|++.||+.|+++|++|++|++||||+|..++|..+.+|..+
T Consensus       152 ~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~  212 (421)
T cd00833         152 RISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKA  212 (421)
T ss_pred             HHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhC
Confidence            9999999999999999999999999999999999999999999999998889888888754

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.97  E-value=4.1e-31  Score=247.18  Aligned_cols=194  Identities=25%  Similarity=0.359  Sum_probs=168.6

Q ss_pred             EEEEeccccCCCCCCHHHHHHHHHcCCCceeeCC--CCCCCCC------------CcceeeecC---CCCCCCC-CCHHH
Q 023909           72 IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ--GFDCSEF------------PTRIAAEIK---SLSTGGW-ISPKI  133 (275)
Q Consensus        72 VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~------------~~~~~g~i~---~fd~~~~-i~~~~  133 (275)
                      |+|||||+++|.|.++++||++|.+|++++++++  +|+...+            .+.++|+++   +||+..| +++++
T Consensus         1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~   80 (424)
T smart00825        1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE   80 (424)
T ss_pred             CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence            7899999999999999999999999999999984  6765442            567778765   4888888 99999


Q ss_pred             HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 023909          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (275)
Q Consensus       134 ~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (275)
                      .++++++++|+++++.+||+|||++++   ++++.|+|||+|++.+++      ...+......++++.+...+.+..++
T Consensus        81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~---~id~~~~gv~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~  151 (424)
T smart00825       81 AEAMDPQQRLLLEVAWEALEDAGIDPE---SLRGSRTGVFVGAMSSDY------AELLARDPEDIEGYAATGTARSFIAN  151 (424)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHcCCChh---HcCCCCCEEEEEEcHHHH------HHHHhhCccccchhhhccchhHHHHH
Confidence            999999999999999999999999854   356789999999875432      22224455667788888888889999


Q ss_pred             HHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          214 VLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       214 ~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|+..||++||+++|+++|+|++.||++|+++|++|++|++||||+|..+++..+.+|..+
T Consensus       152 ~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~  212 (424)
T smart00825      152 RISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRA  212 (424)
T ss_pred             HHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhc
Confidence            9999999999999999999999999999999999999999999999998999998888754

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.97  E-value=4.4e-31  Score=243.00  Aligned_cols=184  Identities=26%  Similarity=0.317  Sum_probs=151.8

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|||||+|+++|.|. +++||++|++|+++|++++.|+.  ++....+.+. ++      +   ..+   .++...++
T Consensus         1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~~------~---~~~---~~~~~~a~   64 (381)
T PRK05952          1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-NQ------P---SSL---EDLTKTVV   64 (381)
T ss_pred             CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-cc------c---ccc---cHHHHHHH
Confidence            57999999999999999 99999999999999999987752  1111111110 01      1   113   33566889


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-Hhcc---CCCCCcccccccchHHHHHHHHHhCCCCc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp  224 (275)
                      .+||+|||+.+      +.+|+||++|++.++...+++++..+ ..+.   ..++|..+...++|.++++|++.|+++||
T Consensus        65 ~~Al~dagl~~------~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp  138 (381)
T PRK05952         65 TAALKDAGLTP------PLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP  138 (381)
T ss_pred             HHHHHhcCCCC------CCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence            99999999973      24789999999999988888877666 3222   25677788888999999999999999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++++++|+||+.||.+|+++|++|++|++||||+|..++|..+.+|.++
T Consensus       139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~  188 (381)
T PRK05952        139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQM  188 (381)
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhc
Confidence            99999999999999999999999999999999999998999999999875

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.97  E-value=2.2e-29  Score=233.22  Aligned_cols=196  Identities=20%  Similarity=0.249  Sum_probs=160.4

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCC-CceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGV-TGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~-~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      |++|||||+|+++|.|.++++||++|++|+ ++|++++.|+.. ++. +.|.+++|+. .+++.+..+.+++..++.+.+
T Consensus         1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a   77 (392)
T PRK09185          1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPT-WVGEVVGVEL-PALPAALAAFDCRNNRLALLA   77 (392)
T ss_pred             CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCe-EEEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence            579999999999999999999999999999 999999877643 443 4467877773 346777778889988888877


Q ss_pred             HHH---HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCC
Q 023909          148 GKK---ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (275)
Q Consensus       148 a~~---Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G  223 (275)
                      +.+   ++++++-      +.+.+|+||++|++.++....+..+..+ ........++.+.....+.++++|++.||++|
T Consensus        78 ~~~~~~a~~~~~~------~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  151 (392)
T PRK09185         78 LQQIEPAVEAAIA------RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG  151 (392)
T ss_pred             HHHHHHHHHhhcc------cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence            766   5555541      2456799999999999998888777665 22222234566677788999999999999999


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          224 PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       224 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |+++++++|+|++.||++|+++|++|+||.|||||+|. +++..+.+|..+
T Consensus       152 p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~  201 (392)
T PRK09185        152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSL  201 (392)
T ss_pred             CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhc
Confidence            99999999999999999999999999999999999997 677777887754

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.97  E-value=5.8e-29  Score=232.59  Aligned_cols=197  Identities=24%  Similarity=0.252  Sum_probs=159.2

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      ...+|+|||||+++|.|.++++||++|++|+++|+++++|+...+..+++|+++.|+...      ...+++.+++.+.+
T Consensus         9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~a   82 (425)
T PRK06501          9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESP------FGASALSEALARLA   82 (425)
T ss_pred             CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeeccccc------ccccCHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999999999986433322      22366789999999


Q ss_pred             HHHHHHHcCCCCcccC-----------CCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHH
Q 023909          148 GKKALVDAGITEQVSG-----------ELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVL  215 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~-----------~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i  215 (275)
                      +++||+|||+.+..+.           ...+.+++++.+.......    .+..+ ........+.++.....+.++++|
T Consensus        83 a~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  158 (425)
T PRK06501         83 AEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDALHERFQFGSIADRL  158 (425)
T ss_pred             HHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCChhhhhhcccHHHHHH
Confidence            9999999999532211           0125688998887654322    23333 333333334445666778899999


Q ss_pred             HHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          216 AMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       216 a~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +..||++||+++|+++|+|+++||++|+++|++|++|++||||+|..++|..+.+|+.+
T Consensus       159 ~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~  217 (425)
T PRK06501        159 ADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLL  217 (425)
T ss_pred             HHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998999999998754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=2.1e-30  Score=251.83  Aligned_cols=198  Identities=26%  Similarity=0.426  Sum_probs=171.9

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCC-CCCCCC--CCccee--eecCCCCCCCC-CCHHHHhhCCHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-GFDCSE--FPTRIA--AEIKSLSTGGW-ISPKIAKKADKYL  141 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~--~~~~~~--g~i~~fd~~~~-i~~~~~~~~d~~~  141 (275)
                      .+++|||+||.+.+|..+++++||.+|.+|.+.+++-+ ||...-  +|-+.|  -.++.||..+| ..++++..||||.
T Consensus         9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~   88 (2376)
T KOG1202|consen    9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQL   88 (2376)
T ss_pred             cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccccCHHH
Confidence            47899999999999999999999999999999998874 566542  233332  12445999999 9999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 023909          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (275)
Q Consensus       142 rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l  221 (275)
                      ||+|++.|||+-||||+|..   +.+.+||||+|.+..+...      .+..++..+..+...+-..++.++||+|.|+|
T Consensus        89 RlLLE~t~EAivDaGiNP~~---LRGs~tGv~vg~s~seTs~------~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf  159 (2376)
T KOG1202|consen   89 RLLLEATWEAIVDAGINPDD---LRGSRTGVFVGVSGSETSG------ALSQDPDTVNGYSMTGCVRAMFANRISYTFDF  159 (2376)
T ss_pred             HHHHHHHHHHHHhCCCChhh---cCcccceeEEeecCccccc------cccCCCccccceeecccHHHHhhcceeEEEec
Confidence            99999999999999999854   7899999999998766542      22334555777778888889999999999999


Q ss_pred             CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          222 TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       222 ~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +||++.++++|+|++.|+..|++.++.|+||.|||+|+++.+.|.+-.-|-+|
T Consensus       160 qGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRL  212 (2376)
T KOG1202|consen  160 QGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRL  212 (2376)
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHh
Confidence            99999999999999999999999999999999999999999999998888776

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=99.91  E-value=6.1e-24  Score=192.85  Aligned_cols=132  Identities=27%  Similarity=0.441  Sum_probs=123.0

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHH
Q 023909          137 ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVL  215 (275)
Q Consensus       137 ~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i  215 (275)
                      +++.+++++.++++||+|||+.      .+++|+||++|++.+++..+++.++.+ ..+...++|+.++..+.|.++++|
T Consensus         1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i   74 (342)
T PRK14691          1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV   74 (342)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence            5788999999999999999975      346799999999999999988888877 667788999999999999999999


Q ss_pred             HHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          216 AMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       216 a~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++.||++||+++|+++|+||+.||+.|+++|++|++|++||||+|..++|..+.+|..+
T Consensus        75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~  133 (342)
T PRK14691         75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAA  133 (342)
T ss_pred             HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999864

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.73  E-value=8.6e-17  Score=146.88  Aligned_cols=170  Identities=19%  Similarity=0.147  Sum_probs=119.9

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|+|+|+|+++|.|.+.++.|.+|+.|.+.......++............        +-++......+..+|+..++
T Consensus         2 ~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~r~~~La~~Al   73 (348)
T PRK06147          2 MRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPV--------PLPPPWRGPERLAEMAAPAI   73 (348)
T ss_pred             CCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecC--------cCCcccCchHHHHHHHHHHH
Confidence            5689999999999999999999999999977664444333210110111111        11111122346788999999


Q ss_pred             HHHHHHcC-CCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC--CCcc
Q 023909          149 KKALVDAG-ITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW--TGPS  225 (275)
Q Consensus       149 ~~Al~dAG-~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l--~Gp~  225 (275)
                      .+||++++ ++        ..+++++++.+..+.               ...+.    ......+..++..+|+  +||+
T Consensus        74 ~~aL~~a~~~~--------~~~i~lil~~~~~~~---------------~~~~~----~~~~~~~~~~~~~lG~~~~~~~  126 (348)
T PRK06147         74 AEALEGLPALD--------ASEAPLLLCVAEEER---------------PGRPP----DLEERLLRELEARLGLRLEPGS  126 (348)
T ss_pred             HHHHHhccccc--------ccCCcEEEEeCchhc---------------CCCCc----chHHHHHHHHHHHhCCCCCCCc
Confidence            99999998 34        345778887643110               00010    1112345667778887  6889


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHh
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAV  273 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~  273 (275)
                      ++|+++|+|+++||..|+++|++|++|.+||||+|..+.|..+.+|..
T Consensus       127 ~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~  174 (348)
T PRK06147        127 AVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEA  174 (348)
T ss_pred             ccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHH
Confidence            999999999999999999999999999999999999888888877764

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.66  E-value=1.8e-15  Score=136.83  Aligned_cols=121  Identities=28%  Similarity=0.470  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      +++|++.++++||++||++++   ....+..+||+|++.+.+....    ........+.|+.+.+...+.++++|+..+
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l   83 (332)
T cd00825          11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPRFQV----FGADAMRAVGPYVVTKAMFPGASGQIATPL   83 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHHHHh----hhhccccccCcchhhcccchHHHHHHHHHh
Confidence            688999999999999999843   2345678999999877654211    124455677888898999999999999999


Q ss_pred             CCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHH
Q 023909          220 GWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG  267 (275)
Q Consensus       220 ~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~  267 (275)
                      |++||+++|+++|+|++.||++|+++|++|++|.+||+|+|....+..
T Consensus        84 gl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~  131 (332)
T cd00825          84 GIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD  131 (332)
T ss_pred             CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHH
Confidence            999999999999999999999999999999999999999998766653

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.38  E-value=1.5e-12  Score=114.48  Aligned_cols=90  Identities=29%  Similarity=0.357  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.++|+++|++++.++       .|++|+.....                         ....++..++...|
T Consensus        27 ~~L~~~a~~~al~~~~i~~~~Id-------~v~~G~~~~~~-------------------------~g~~~ar~~~l~aG   74 (264)
T PF00108_consen   27 EDLAAEAVKAALERAGIDPEDID-------AVIVGNVLQEG-------------------------EGQNIARQAALAAG   74 (264)
T ss_dssp             HHHHHHHHHHHHHHHTSHGGGEE-------EEEEE-SSSCT-------------------------TTCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcccchhhhh-------hcCcccccccc-------------------------cchhhhhhhhhhcc
Confidence            55888999999999999876543       58999864321                         13346677777778


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |  .-|.++|+.+|+||+.||++|+..|++|+.|++||||+|.+
T Consensus        75 l~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~m  118 (264)
T PF00108_consen   75 LPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESM  118 (264)
T ss_dssp             S-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEET
T ss_pred             cccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccc
Confidence            7  35999999999999999999999999999999999999984

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.29  E-value=2.4e-11  Score=112.52  Aligned_cols=90  Identities=26%  Similarity=0.403  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.++++++|+|+|+++++++       .||+|+.....                         ....++..++...|
T Consensus        28 ~~L~~~a~~~al~~agi~~~~Id-------~vv~G~~~~~~-------------------------~g~~~~r~~~~~~G   75 (392)
T PRK06633         28 PMLAAHLIKDILQNSKIDPALVN-------EVILGQVITGG-------------------------SGQNPARQTLIHAG   75 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCccc-------------------------cccHHHHHHHHHCC
Confidence            34888999999999999876544       48998753211                         11234566778889


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  =|+++|+++|+||+.|++.|+++|++|++|++||||+|.+
T Consensus        76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~m  119 (392)
T PRK06633         76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENM  119 (392)
T ss_pred             CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccC
Confidence            96  4999999999999999999999999999999999999974

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.29  E-value=1.6e-11  Score=114.13  Aligned_cols=91  Identities=21%  Similarity=0.276  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.++..+||+|+|+++++++       .|++|+...+.                        .....++..++...|
T Consensus        27 ~eL~~~a~~~al~~agi~~~~Id-------~v~~G~~~~~~------------------------~~~~~~ar~~~~~~G   75 (401)
T PRK08131         27 DDLAATVIRRLLEKSGFPGDDIE-------DVILGCTNQAG------------------------EDSRNVARNALLLAG   75 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc------------------------cccccHHHHHHHhcC
Confidence            44889999999999999876543       58998753211                        001123445778888


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|.++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        76 lp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esm  119 (401)
T PRK08131         76 LPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESM  119 (401)
T ss_pred             CCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCC
Confidence            85  6899999999999999999999999999999999999974

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.26  E-value=4.6e-11  Score=112.09  Aligned_cols=90  Identities=21%  Similarity=0.336  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+++|+++++++       .|++|+....                         .....++..++...|
T Consensus        30 ~eL~~~a~~~al~~agl~~~~ID-------~vi~G~~~~~-------------------------~~~~~~ar~~a~~aG   77 (428)
T PRK08963         30 VDLGKMVVGELLARSEIDPELIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG   77 (428)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCC-------------------------CCccHHHHHHHHHCC
Confidence            44888999999999999876543       5889874310                         011234566888999


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esm  121 (428)
T PRK08963         78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSS  121 (428)
T ss_pred             CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEeccccc
Confidence            96  5999999999999999999999999999999999999974

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.26  E-value=4.4e-11  Score=103.98  Aligned_cols=90  Identities=33%  Similarity=0.541  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++.+||+++|++++       +..+|++|+..+++.                         .+..+.+|+..+
T Consensus         7 ~~~l~~~A~~~al~~ag~~~~-------~i~~li~~~~~~~~~-------------------------~~~~a~~i~~~l   54 (254)
T cd00327           7 ASELGFEAAEQAIADAGLSKG-------PIVGVIVGTTGGSGE-------------------------FSGAAGQLAYHL   54 (254)
T ss_pred             HHHHHHHHHHHHHHHcCCCCC-------CceEEEEEECCCCcc-------------------------ccHHHHHHHHHh
Confidence            578999999999999998853       345899998754321                         356688999999


Q ss_pred             CC-CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          220 GW-TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       220 ~l-~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |+ ++|+++|+++|+|++.||++|+++|++|++|.+||+|+|.
T Consensus        55 g~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~   97 (254)
T cd00327          55 GISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE   97 (254)
T ss_pred             CCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce
Confidence            99 9999999999999999999999999999999999999986

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.25  E-value=4.4e-11  Score=111.13  Aligned_cols=91  Identities=20%  Similarity=0.226  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHH-HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          142 IYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       142 rl~l~aa~~Al~-dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      .|+.+++.++|+ ++|+++++++       .||+|+....                        +.....++..++...|
T Consensus        28 ~L~~~a~~~al~r~a~i~~~~Id-------~vi~G~~~~~------------------------~~~g~~~ar~~~l~~G   76 (400)
T PRK13359         28 DLGAVPLKALVERNPDVDWAAID-------DVIYGCANQA------------------------GEDNRNVARMSLLLAG   76 (400)
T ss_pred             HHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence            377889999999 5799876544       5899875321                        0111346778888999


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      |..  |+++|+++|+||+.|++.|+++|++|++|++||||+|.+-
T Consensus        77 l~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS  121 (400)
T PRK13359         77 LPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS  121 (400)
T ss_pred             CCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccC
Confidence            964  9999999999999999999999999999999999999753

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.24  E-value=5.5e-11  Score=110.27  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+|+|+++++++       +|++|+....                        + ....++..++..+|
T Consensus        27 ~~L~~~a~~~al~dagi~~~dID-------~vi~g~~~~~------------------------~-~~~~~a~~~~~~~G   74 (388)
T PRK06366         27 PQLGGAAIKAVIDDAKLDPALVQ-------EVIMGNVIQA------------------------G-VGQNPAGQAAYHAG   74 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC------------------------C-ccCcHHHHHHHHCC
Confidence            45889999999999999976644       6888864211                        0 01123566888899


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +..  |.++|+++|+||+.||..|+++|++|++|++||||+|.+
T Consensus        75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~m  118 (388)
T PRK06366         75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENM  118 (388)
T ss_pred             CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEcc
Confidence            965  999999999999999999999999999999999999873

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.23  E-value=4.2e-11  Score=111.23  Aligned_cols=90  Identities=20%  Similarity=0.356  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|+|+++++++       .|++|+.....                        ..++ ++..++..+|
T Consensus        27 ~~La~~A~~~AL~~agl~~~dID-------~vi~g~~~~~~------------------------~~~~-~a~~va~~lG   74 (393)
T PRK05656         27 VELGAAVIRRLLEQTGLDPAQVD-------EVILGQVLTAG------------------------AGQN-PARQAAIKAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCC------------------------CCCc-HHHHHHHHcC
Confidence            45889999999999999876543       68888753110                        1112 4567889999


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+|++.||+.|+++|++|.+|.+||+|+|.+
T Consensus        75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~m  118 (393)
T PRK05656         75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENM  118 (393)
T ss_pred             CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhh
Confidence            96  4999999999999999999999999999999999999964

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.23  E-value=5.1e-11  Score=111.02  Aligned_cols=90  Identities=21%  Similarity=0.338  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|+|+++++++       .|++|+.....                         ....++..++..+|
T Consensus        27 ~eLa~~A~~~AL~~agl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~~G   74 (404)
T PRK06205         27 EELAATVIRALVERTGIDPARID-------DVIFGQGYPNG-------------------------EAPAIGRVAALDAG   74 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHcC
Confidence            44889999999999999876543       58888754221                         11234557888889


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+||+.||+.|+++|++|.+|++||+|+|.+
T Consensus        75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~m  118 (404)
T PRK06205         75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESM  118 (404)
T ss_pred             CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhh
Confidence            86  4899999999999999999999999999999999999973

>PRK09051 beta-ketothiolase; Provisional

Probab=99.23  E-value=5.1e-11  Score=110.62  Aligned_cols=91  Identities=25%  Similarity=0.434  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+++|+++++++       .|++|+....+                        ......+..++...|
T Consensus        28 ~eL~~~A~~~AL~~agi~~~dID-------~vi~g~~~~~~------------------------~~~~~~a~~~~~~~G   76 (394)
T PRK09051         28 TDLGATVVREALARAGVDPDQVG-------HVVFGHVIPTE------------------------PRDMYLSRVAAINAG   76 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeeecccc------------------------CCCccHHHHHHHHcC
Confidence            44889999999999999876543       57888754211                        011223444566678


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+|++.|++.|+++|++|.+|.+||+|+|.+
T Consensus        77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~m  120 (394)
T PRK09051         77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESM  120 (394)
T ss_pred             CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhc
Confidence            84  5999999999999999999999999999999999999974

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=99.23  E-value=2.1e-10  Score=97.52  Aligned_cols=130  Identities=19%  Similarity=0.259  Sum_probs=115.3

Q ss_pred             CCCCHHHHhhCCHHHHHHHHHHHHHHHHc-CCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCccccc
Q 023909          127 GWISPKIAKKADKYLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPY  205 (275)
Q Consensus       127 ~~i~~~~~~~~d~~~rl~l~aa~~Al~dA-G~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (275)
                      .+|++.+.|||++..|+++.++.+++++. ..+            .+++++..|+.....+....+..+ ..++|..|..
T Consensus        21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~~~d------------~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~   87 (218)
T PF13723_consen   21 AFLPPMQRRRLSRLSRLALEAALECLAEDEQPD------------AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQ   87 (218)
T ss_pred             ccCCHHHHcccCHHHHHHHHHHHHHHhccCCCC------------cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhh
Confidence            44999999999999999999999998652 221            688999999999999998888443 4699999999


Q ss_pred             ccchHHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHH
Q 023909          206 SLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNK  271 (275)
Q Consensus       206 ~~~~~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf  271 (275)
                      +.+|.+++.+++..+.++|+.++..+-.|...||..|+-.|..| ++.+|++++|.. .|..|..|
T Consensus        88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~-~p~~y~~~  151 (218)
T PF13723_consen   88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEP-LPEPYQEF  151 (218)
T ss_pred             hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCC-CChhhhhc
Confidence            99999999999999999999999999999999999999999999 999999999994 56666665

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.21  E-value=5.9e-11  Score=109.90  Aligned_cols=91  Identities=19%  Similarity=0.156  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.++++++|+|+|+++++++       .|++|+....                        +.....++..++...|
T Consensus        27 ~eL~~~a~~~aL~~agi~~~~Id-------~v~~G~~~~~------------------------~~q~~~~ar~~~l~~G   75 (387)
T PRK07850         27 AELLGAVQRAVLDRAGIDPGDVE-------QVIGGCVTQA------------------------GEQSNNITRTAWLHAG   75 (387)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHhCC
Confidence            44889999999999999876543       4888874210                        1101224556666688


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+||+.||+.|++.|++|++|++||||+|.+
T Consensus        76 l~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~m  119 (387)
T PRK07850         76 LPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAM  119 (387)
T ss_pred             CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecC
Confidence            85  4899999999999999999999999999999999999985

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.21  E-value=5.2e-11  Score=110.45  Aligned_cols=91  Identities=20%  Similarity=0.285  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+++|+++++++       .|++|+...+.                        .....++..++..+|
T Consensus        28 ~dL~~~A~~~aL~~agi~~~~ID-------~vi~G~~~~~~------------------------~~~~~~a~~i~~~lG   76 (392)
T PRK07108         28 ATLGGHVVQHAVERAKLDPAEVE-------DVIMGCANPEG------------------------ATGANIARQIALRAG   76 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------cEEEEEeeccc------------------------ccccHHHHHHHHHcC
Confidence            56899999999999999976543       38898764321                        111247788889889


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  .|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~m  120 (392)
T PRK07108         77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESI  120 (392)
T ss_pred             CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecc
Confidence            85  7999999999999999999999999999999999999975

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.21  E-value=1.1e-10  Score=109.44  Aligned_cols=90  Identities=18%  Similarity=0.214  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH--
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD--  218 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~--  218 (275)
                      ..|+.++++++|+++|+++++++       .|++|+.....                        . ...++..++..  
T Consensus        32 ~eL~~~a~~~al~~agl~~~~Id-------~vv~G~~~~~~------------------------~-~~~~~r~~~l~~g   79 (427)
T PRK09268         32 QDMLTAALDGLVDRFGLQGERLG-------EVVAGAVLKHS------------------------R-DFNLTRECVLGSA   79 (427)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC------------------------c-cccHHHHHHHHcC
Confidence            45889999999999999876543       58888743210                        0 01134444444  


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++...|+++|+++|+||+.|+..|+++|++|.+|++||||+|.+
T Consensus        80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~m  123 (427)
T PRK09268         80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT  123 (427)
T ss_pred             CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEcc
Confidence            44568999999999999999999999999999999999999974

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.21  E-value=1.4e-10  Score=107.83  Aligned_cols=91  Identities=20%  Similarity=0.253  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHc-CCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~dA-G~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+.+++++||+++ |+++++++       .|++|+...+.                        ......+..+....
T Consensus        32 ~eLa~~A~~~AL~~a~gl~~~dID-------~vi~g~~~~~~------------------------~~~~~~ar~~~~~~   80 (399)
T PRK09052         32 DDLLAHVLRSAVAQVPGLDPKLIE-------DAIVGCAMPEA------------------------EQGLNVARIGALLA   80 (399)
T ss_pred             HHHHHHHHHHHHHhccCcCHHHCC-------EEEEEecCCCC------------------------CCCchHHHHHHHHc
Confidence            458899999999997 99876543       58898753211                        11122333355666


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++||+|+|.+
T Consensus        81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~m  125 (399)
T PRK09052         81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESM  125 (399)
T ss_pred             CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecc
Confidence            885  4799999999999999999999999999999999999974

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.20  E-value=1.4e-10  Score=108.78  Aligned_cols=90  Identities=21%  Similarity=0.324  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|+|+++++++       .|++|+....                        . ....++..++...|
T Consensus        32 ~~L~~~a~~~al~~agl~~~~Id-------~vi~G~~~~~------------------------~-~~~~~ar~~~l~aG   79 (430)
T TIGR02446        32 VDLGKMVVSELLARSEIDPKLIE-------QLVFGQVVQM------------------------P-EAPNIAREIVLGTG   79 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCc------------------------C-ccchHHHHHHHhCC
Confidence            45889999999999999876543       4788864310                        0 11235666666678


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|.++|+++|+||+.|++.|+++|++|++|++||||+|.+
T Consensus        80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~m  123 (430)
T TIGR02446        80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSS  123 (430)
T ss_pred             CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcc
Confidence            86  3899999999999999999999999999999999999985

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.20  E-value=1.8e-10  Score=108.49  Aligned_cols=91  Identities=18%  Similarity=0.261  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+.....                        ......+..++..+|
T Consensus        72 ~eLa~eA~~~AL~dAgl~~~dID-------~vv~G~~~~~~------------------------~~~~~~~r~~a~~~G  120 (452)
T PLN02287         72 DDLLAPVLKAVVEKTGLNPSEVG-------DIVVGTVLAPG------------------------SQRANECRMAAFYAG  120 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCcc------------------------cccchHHHHHHHHCC
Confidence            45889999999999999876543       57888753211                        011123345667779


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +..  |+++|+++|+||+.||+.|+++|++|.+|++||+|+|.+
T Consensus       121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~m  164 (452)
T PLN02287        121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESM  164 (452)
T ss_pred             CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEec
Confidence            874  889999999999999999999999999999999999974

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.20  E-value=1.2e-10  Score=108.29  Aligned_cols=91  Identities=22%  Similarity=0.287  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~-dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+.++++++|+ ++|+++++++       .|++|+....                        +.....++..++...
T Consensus        27 ~~L~~~a~~~al~~~agi~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~   75 (401)
T PRK09050         27 DDLGAVPLKALMARNPGVDWEAVD-------DVIYGCANQA------------------------GEDNRNVARMSALLA   75 (401)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHHc
Confidence            4488899999999 6899876543       4899875311                        111124566688999


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsm  120 (401)
T PRK09050         76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESM  120 (401)
T ss_pred             CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEeccccc
Confidence            993  5999999999999999999999999999999999999974

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.20  E-value=8.9e-11  Score=108.98  Aligned_cols=90  Identities=24%  Similarity=0.323  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+++|+++++++       .|++|+.....                        . ...++..++..+|
T Consensus        27 ~eLa~~A~~~aL~~agl~~~dID-------~vi~g~~~~~~------------------------~-~~~~~~~~~~~~G   74 (393)
T PRK08235         27 TELGGIAIKEALERANVSAEDVE-------EVIMGTVLQGG------------------------Q-GQIPSRQAARAAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC------------------------C-CCCHHHHHHHHcC
Confidence            34889999999999999876543       58888753210                        0 1123445678888


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+||+.||+.|+++|++|.+|.+||+|+|.+
T Consensus        75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~m  118 (393)
T PRK08235         75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESM  118 (393)
T ss_pred             CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeecc
Confidence            84  5899999999999999999999999999999999999974

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.19  E-value=1.2e-10  Score=108.31  Aligned_cols=90  Identities=18%  Similarity=0.297  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       .|++|+.....                        . ...++...+...|
T Consensus        32 ~eL~~~a~~~aL~~Agi~~~dID-------~vi~G~~~~~~------------------------~-~~~~~~~~~l~ag   79 (397)
T PRK06954         32 PQLGAAAIAAAVERAGLKPEQID-------EVVMGCVLPAG------------------------Q-GQAPARQAALGAG   79 (397)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------c-chHHHHHHHHcCC
Confidence            44889999999999999876543       48888753211                        0 1122333333444


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  +-|+++|+++|+||+.||+.|+++|++|++|++||+|+|.+
T Consensus        80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~m  123 (397)
T PRK06954         80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESM  123 (397)
T ss_pred             CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeecc
Confidence            4  35779999999999999999999999999999999999974

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.18  E-value=1.8e-10  Score=106.79  Aligned_cols=91  Identities=19%  Similarity=0.221  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.++|+++|+++++++       .|++|+....                        +.....++..+...-|
T Consensus        27 ~~L~~~a~~~al~~a~l~~~~Id-------~vi~G~~~~~------------------------~~~~~~~ar~~~l~~g   75 (390)
T PRK06504         27 ADLAAQVLDALVDRSGADPALIE-------DVIMGCVSQV------------------------GEQATNVARNAVLASK   75 (390)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence            45889999999999999876544       4888865310                        0000122333333335


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |  .-|.++|+.+|+||+.|+..|+++|++|++|++||||+|.+
T Consensus        76 l~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsm  119 (390)
T PRK06504         76 LPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESM  119 (390)
T ss_pred             CCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeec
Confidence            5  56999999999999999999999999999999999999974

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.18  E-value=1.3e-10  Score=108.02  Aligned_cols=91  Identities=19%  Similarity=0.211  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.++++++|+++|+++++++       -|++|+.....                        .....++..++...|
T Consensus        29 ~dLa~~A~~~al~~agi~p~~ID-------~vi~G~~~~~~------------------------~~~~~~~r~a~~~~G   77 (402)
T PRK08242         29 VRLAAGLLEALRDRNGLDTAAVD-------DVVLGCVTPVG------------------------DQGADIARTAVLAAG   77 (402)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------cccccHHHHHHHHcC
Confidence            34788899999999999876543       47888764211                        111234555667778


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  +-|+++|+.+|+|+++||+.|+++|++|.+|.+||||+|.+
T Consensus        78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~m  121 (402)
T PRK08242         78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESM  121 (402)
T ss_pred             CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEcc
Confidence            8  35899999999999999999999999999999999999984

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.16  E-value=1.8e-10  Score=106.81  Aligned_cols=91  Identities=24%  Similarity=0.293  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||++||+.+++++       .|++|+...+.                        .....++..++..+|
T Consensus        28 ~eLa~~A~~~AL~~ag~~~~dID-------~vi~g~~~~~~------------------------~~g~~~a~~~~~~lG   76 (391)
T PRK07661         28 DDLGALVVKETLKRAGNYEGPID-------DLIIGCAMPEA------------------------EQGLNMARNIGALAG   76 (391)
T ss_pred             HHHHHHHHHHHHHhcCCChhHCC-------EEEEEeccccc------------------------cccchHHHHHHHHcC
Confidence            44889999999999987644332       57888643210                        001234556888999


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|.++|+++|+||+.||+.|++.|++|++|++||+|+|.+
T Consensus        77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~m  120 (391)
T PRK07661         77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESM  120 (391)
T ss_pred             CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeec
Confidence            97  4999999999999999999999999999999999999964

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.16  E-value=2.2e-10  Score=106.39  Aligned_cols=91  Identities=23%  Similarity=0.252  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~-dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+.++.+++|+ ++|+++++++       .|++|+....                        +.....++..++...
T Consensus        26 ~~L~~~a~~~al~~~a~i~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~   74 (400)
T TIGR02430        26 DDLAAVPIKALLARNPQLDWAAID-------DVIYGCANQA------------------------GEDNRNVARMAALLA   74 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence            4488899999999 6899876543       4899875311                        111123566788999


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        75 Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~m  119 (400)
T TIGR02430        75 GLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESM  119 (400)
T ss_pred             CCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccc
Confidence            996  5999999999999999999999999999999999999985

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.16  E-value=2.7e-10  Score=106.86  Aligned_cols=89  Identities=27%  Similarity=0.411  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+....                        .. ...++..++..+|
T Consensus        28 ~~L~~~A~~~Al~dAgl~~~dID-------~vi~g~~~~~------------------------~~-~~~~a~~v~~~lG   75 (426)
T PRK08170         28 SDLAVAAGRALLNRQPFAPDDLD-------EVILGCAMPS------------------------PD-EANIARVVALRLG   75 (426)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------CC-cChHHHHHHHHhC
Confidence            45889999999999999876543       6888865310                        00 1134567888999


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +.  -|+++|+++|+|++.||++|+++|++|++|.+||+|+|.
T Consensus        76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~  118 (426)
T PRK08170         76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEA  118 (426)
T ss_pred             cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEec
Confidence            94  499999999999999999999999999999999999996

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.12  E-value=5.5e-10  Score=100.70  Aligned_cols=141  Identities=20%  Similarity=0.228  Sum_probs=98.8

Q ss_pred             CCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      |.+|.|+++|...|.- ...+++++.+......+.  .++   ++..+.   +  .+      +     -.....|+.++
T Consensus         1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~~~---gi~~r~---~--~~------~-----~~~~~~la~~A   59 (319)
T PRK09352          1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--TRT---GIKERR---I--AA------P-----DETTSDLATEA   59 (319)
T ss_pred             CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--hhc---CeEEEE---e--CC------C-----CCCHHHHHHHH
Confidence            4578999999999996 677888876522110010  010   010000   0  00      0     01347799999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSY  226 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~  226 (275)
                      +.+||+++|+++++++       .|++|++..+.                        .. ...+.+|+..+|+.+ |.+
T Consensus        60 ~~~al~~agl~~~~id-------~vi~~~~~~~~------------------------~~-~~~~~~i~~~lG~~~~~~~  107 (319)
T PRK09352         60 AKKALEAAGIDPEDID-------LIIVATTTPDY------------------------AF-PSTACLVQARLGAKNAAAF  107 (319)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEcCCCCC------------------------CC-chHHHHHHHHhCCCCCcEe
Confidence            9999999999865432       47777653211                        01 134678999999988 899


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .|+++|+|++.||..|+++|++|++|.+||+|+|.+
T Consensus       108 ~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~  143 (319)
T PRK09352        108 DLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKL  143 (319)
T ss_pred             eccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhh
Confidence            999999999999999999999999999999999973

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.10  E-value=5.8e-10  Score=103.68  Aligned_cols=92  Identities=20%  Similarity=0.288  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|+|+++++++       .|++|+.......                     ..... ....+...++
T Consensus        33 ~~L~~~a~~~AL~~agl~~~dID-------~vi~g~~~~~~~~---------------------~~~~~-~~~~l~a~~~   83 (394)
T PRK06445         33 EELAAMLINRLIEKTGIKPEEID-------DIITGCALQVGEN---------------------WLYGG-RHPIFLARLP   83 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------eeEEEeecCCCcc---------------------cccHH-HHHHHHcCCC
Confidence            44889999999999999976543       5888875432100                     00001 1112222233


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      .+-|+++|+++|+||+.||+.|+++|++|.+|++||+|+|.
T Consensus        84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~  124 (394)
T PRK06445         84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEH  124 (394)
T ss_pred             CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence            45799999999999999999999999999999999999995

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.10  E-value=8.8e-10  Score=98.85  Aligned_cols=140  Identities=21%  Similarity=0.292  Sum_probs=99.5

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ..+.|+|+|...|.- .+.+++-+.+-.....|.....     ...++      +..     +     -.-..-|+.+|+
T Consensus         2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG-----ir~R~------~a~-----~-----~e~~s~la~~Aa   60 (323)
T COG0332           2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG-----IRERR------IAA-----D-----DETTSDLAVEAA   60 (323)
T ss_pred             CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecC-----Cceee------ecC-----C-----CccHHHHHHHHH
Confidence            356799999999996 5666665444333333332211     11111      000     0     122456999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-cccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~  227 (275)
                      ++||++||+++++++       -|++.++.++                         ......|..|...||+++ +.+-
T Consensus        61 ~~AL~~Agi~~~dID-------lII~aT~tpd-------------------------~~~Ps~A~~vq~~LG~~~~~afD  108 (323)
T COG0332          61 RKALEDAGISPDDID-------LIIVATSTPD-------------------------HLFPSTACLVQARLGLGGAPAFD  108 (323)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEcCCcc-------------------------cCCChHHHHHHHHhCCCCcceee
Confidence            999999999976543       3555554322                         123456889999999988 9999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++.+|++.++||..|..+|++|.++.+||.|.|.+
T Consensus       109 l~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~  143 (323)
T COG0332         109 LQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL  143 (323)
T ss_pred             chhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHh
Confidence            99999999999999999999999999999999985

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.08  E-value=1.7e-09  Score=99.80  Aligned_cols=92  Identities=21%  Similarity=0.268  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ....|+.+++.+||++||+++++++       .|++++...++                        . ....+..++..
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id-------~li~~~~~~~~------------------------~-~p~~a~~v~~~  141 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDID-------AVIVACSNMQR------------------------A-YPAMAIEIQQA  141 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCC------------------------C-CcHHHHHHHHh
Confidence            3467999999999999999865432       46776642110                        1 11246778999


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|++++++.++.+|+|++.||.+|+++|++|.+|.|||+|+|.+
T Consensus       142 Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~  185 (372)
T PRK07515        142 LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEIC  185 (372)
T ss_pred             cCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecc
Confidence            99999999999999999999999999999999999999999973

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.06  E-value=1.4e-09  Score=100.80  Aligned_cols=91  Identities=20%  Similarity=0.245  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+|||+++++++       +|++|+....                        +.....++..+....+
T Consensus        27 ~~L~~~a~~~al~dagl~~~~ID-------~vv~g~~~~~------------------------~~~~~~~~~~~~l~~g   75 (382)
T PRK07801         27 ADLGAHVLKGLVDRTGIDPAAVD-------DVIFGCVDTI------------------------GPQAGNIARTSWLAAG   75 (382)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEeeccC------------------------CcccccHHHHHHHHcC
Confidence            44889999999999999876543       6788753100                        0000112222333344


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  ..|.++|+++|+||+.||+.|+++|++|++|++||+|+|.+
T Consensus        76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~m  119 (382)
T PRK07801         76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNM  119 (382)
T ss_pred             CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhh
Confidence            4  46899999999999999999999999999999999999953

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.05  E-value=1.5e-09  Score=100.71  Aligned_cols=91  Identities=20%  Similarity=0.259  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~-dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|..+++++||+ ++|+++++++       .|++|+....                        ......++..++...
T Consensus        28 ~~L~~~~~~~al~~~agl~~~~Id-------~vi~g~~~~~------------------------~~~g~~~ar~~~~~~   76 (387)
T PRK08947         28 EDLSAHLMRSLLARNPALDPAEID-------DIIWGCVQQT------------------------LEQGFNIARNAALLA   76 (387)
T ss_pred             HHHHHHHHHHHHHhccCcChHHhC-------eEEEEecccc------------------------ccccccHHHHHHHHc
Confidence            4578889999999 5899876543       5888864210                        000122455678888


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        77 Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~m  121 (387)
T PRK08947         77 GIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHM  121 (387)
T ss_pred             CCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEcccccc
Confidence            886  4779999999999999999999999999999999999974

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.03  E-value=1.1e-09  Score=101.68  Aligned_cols=91  Identities=27%  Similarity=0.377  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+..++..                     ..  ...++..++..+|
T Consensus        23 ~eLa~~a~~~Al~dagl~~~~Id-------~vi~g~~~~~~~---------------------~~--~~~~a~~va~~lG   72 (389)
T PRK06064         23 RDLAVEAGLEALEDAGIDGKDID-------AMYVGNMSAGLF---------------------VS--QEHIAALIADYAG   72 (389)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc---------------------cc--cccHHHHHHHHcC
Confidence            55889999999999999865432       678887543221                     00  0124677899999


Q ss_pred             CC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      ++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.
T Consensus        73 l~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~  114 (389)
T PRK06064         73 LAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEK  114 (389)
T ss_pred             CCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEe
Confidence            98 699999999999999999999999999999999999986

>PRK08256 lipid-transfer protein; Provisional

Probab=99.02  E-value=1.1e-09  Score=101.74  Aligned_cols=88  Identities=26%  Similarity=0.415  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+|||++++++   +    ++++|+..++..                            ....+...+
T Consensus        22 ~~~La~~A~~~Al~dAGl~~~dI---D----~~~~g~~~~~~~----------------------------~~~~~~~~l   66 (391)
T PRK08256         22 YPDMAAEAGRAALADAGIDYDAV---Q----QAYVGYVYGDST----------------------------SGQRALYEV   66 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCChHHC---C----eeEEEEEeCCcc----------------------------hhHHHHHHc
Confidence            35799999999999999986543   3    345554322110                            001245678


Q ss_pred             CCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |++| |+++|+++|+|++.||..|+++|++|++|.+||+|+|..
T Consensus        67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~  110 (391)
T PRK08256         67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQM  110 (391)
T ss_pred             CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeec
Confidence            9988 999999999999999999999999999999999999974

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=98.99  E-value=3.8e-09  Score=98.17  Aligned_cols=92  Identities=17%  Similarity=0.238  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+..+.+++|+.+|++++.++       -|++|+....                        +.....++..++..-|
T Consensus        30 ~~L~~~~~~~~l~r~~i~~~~id-------~vi~G~~~~~------------------------g~~g~n~aR~~al~ag   78 (417)
T PRK06025         30 QHLAATVLKALAERNGLNTADVD-------DIIWSTSSQR------------------------GKQGGDLGRMAALDAG   78 (417)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEcCCCc------------------------CcccCcHHHHHHHhCC
Confidence            34677788999999999876543       3888875311                        1111346667777777


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      |  +-|+++|+..|+||+.||.+|+++|+.|++|++|+||+|.+-
T Consensus        79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS  123 (417)
T PRK06025         79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMS  123 (417)
T ss_pred             CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccC
Confidence            7  569999999999999999999999999999999999999954

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=98.97  E-value=8.1e-09  Score=93.09  Aligned_cols=139  Identities=20%  Similarity=0.253  Sum_probs=96.1

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .+.|.++|..+|.- .+.+++.+.+......+.  ++   .++..+.   +  .+      +.     .....|+.++++
T Consensus         2 ~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~gi~~r~---~--~~------~~-----~~~~~la~~A~~   60 (318)
T TIGR00747         2 YAGILGTGSYLPEKVLTNADLEKMVDTSDEWIV--TR---TGIKERR---I--AA------DD-----ETSSTMGFEAAK   60 (318)
T ss_pred             CCEEEEEEEECCCceecHHHHHHhcCCchHHee--cc---cCceEEE---E--CC------CC-----CCHHHHHHHHHH
Confidence            36799999999985 677887776532111010  00   0111110   0  00      00     123668999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~v  228 (275)
                      +||+++|+++++++       .|++++...++                         .....+.+++..+|+++ |++.|
T Consensus        61 ~al~~agl~~~~Id-------~~i~~~~~~~~-------------------------~~~~~a~~l~~~lGl~~~~~~~v  108 (318)
T TIGR00747        61 RAIENAGISKDDID-------LIIVATTTPDH-------------------------AFPSAACMVQAYLGIKGIPAFDL  108 (318)
T ss_pred             HHHHHcCCCHHHCC-------EEEEECCCCCC-------------------------CCChHHHHHHHHhCCCCCcEeeh
Confidence            99999999865432       46666543211                         11234678999999998 89999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.+|+|++.||+.|+++|++|.++.+||+|+|..
T Consensus       109 ~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~  142 (318)
T TIGR00747       109 SAACAGFIYALSVAKQYIESGKYKTVLVVGAEKL  142 (318)
T ss_pred             hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhh
Confidence            9999999999999999999999999999999984

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.97  E-value=8e-09  Score=93.97  Aligned_cols=146  Identities=19%  Similarity=0.184  Sum_probs=97.0

Q ss_pred             CCCcEEEEeccccCCCC-CCHHHHHHHHHcC--CCceeeCCCCC-CCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHH
Q 023909           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEG--VTGISDIQGFD-CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIY  143 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~l~~g--~~~i~~~~~~~-~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl  143 (275)
                      ..+.|.|+|+|...|.- .+.+++.+.+...  +..+.+ .++. ..+...+.      +.     .+.     .....|
T Consensus         2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~-~~i~~~~Gi~~R~------~~-----~~~-----~~~~~l   64 (338)
T PRK09258          2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP-GQLEALTGIRERR------WW-----PEG-----TQLSDG   64 (338)
T ss_pred             cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh-hHhhhhcCceeEe------cC-----CCC-----CCHHHH
Confidence            34578999999999996 5667776654321  111100 0000 00111111      10     000     113569


Q ss_pred             HHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC
Q 023909          144 ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (275)
Q Consensus       144 ~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G  223 (275)
                      +.+++++||+++|+.+++++       .|++++...+                         ......+..++..+|++.
T Consensus        65 a~~Aa~~aL~~ag~~~~~Id-------~li~~s~~~~-------------------------~~~p~~a~~v~~~lgl~~  112 (338)
T PRK09258         65 AIAAGRKALAEAGIDPSDIG-------LLINTSVCRD-------------------------YLEPATACRVHHNLGLPK  112 (338)
T ss_pred             HHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCChHHHHHHHHcCCCC
Confidence            99999999999999865432       3566654211                         111246788999999963


Q ss_pred             --cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          224 --PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       224 --p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                        +.+.|.++|+|++.||++|.++|++|.++.+||.++|..
T Consensus       113 ~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~  153 (338)
T PRK09258        113 SCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESA  153 (338)
T ss_pred             CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence              789999999999999999999999999999999999973

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=98.95  E-value=3.4e-09  Score=98.30  Aligned_cols=90  Identities=21%  Similarity=0.310  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+..+++.                        . ...+..++..+|
T Consensus        23 ~~La~~A~~~AL~dAgl~~~dID-------~vi~~~~~~~~~------------------------~-~~~a~~v~~~lG   70 (386)
T cd00751          23 DDLGAAVIKALLERAGLDPEEVD-------DVIMGNVLQAGE------------------------G-QNPARQAALLAG   70 (386)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeccCCCC------------------------C-ChHHHHHHHHcC
Confidence            56899999999999999865543       577776432210                        1 124557889999


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++.  |++.|+++|+|++.||..|+++|++|++|.+||+|+|.+
T Consensus        71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~  114 (386)
T cd00751          71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESM  114 (386)
T ss_pred             CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeecc
Confidence            975  999999999999999999999999999999999999873

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=98.95  E-value=3e-09  Score=99.06  Aligned_cols=90  Identities=21%  Similarity=0.245  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+....+.                      .   ......++..+|
T Consensus        28 ~~L~~ea~~~AL~dagl~~~dID-------~v~vg~~~~~~~----------------------~---~~~~~~~a~~lG   75 (398)
T PRK06157         28 EDLMVEAFLEALADAGIEPKDID-------AAWFGTHYDEIG----------------------S---GKSGTPLSRALR   75 (398)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc----------------------c---cchhHHHHHHcC
Confidence            45889999999999999876543       588886421100                      0   001234677889


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.+ |+++|+++|+||+.||++|+++|++|++|++||+|+|.+
T Consensus        76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~  118 (398)
T PRK06157         76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKL  118 (398)
T ss_pred             CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeec
Confidence            976 778899999999999999999999999999999999974

>PRK06059 lipid-transfer protein; Provisional

Probab=98.95  E-value=3.9e-09  Score=98.29  Aligned_cols=91  Identities=32%  Similarity=0.441  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       .|++|+....                        .......+..++..+|
T Consensus        24 ~~La~~A~~~Al~dAgl~~~dId-------~vi~~~~~~~------------------------~~~~~~~a~~va~~lG   72 (399)
T PRK06059         24 VEYGVVAARAALADAGLDWRDVQ-------LVVGADTIRN------------------------GYPGFVAGATFAQALG   72 (399)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------ccCCccHHHHHHHHhC
Confidence            55889999999999999864432       3555553211                        0011223567899999


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +++ |.++|+++|+|++.||.+|+++|++|++|.+||+|+|.+
T Consensus        73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~  115 (399)
T PRK06059         73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTT  115 (399)
T ss_pred             CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence            988 899999999999999999999999999999999999974

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=98.92  E-value=4.5e-09  Score=97.48  Aligned_cols=90  Identities=26%  Similarity=0.292  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+.....                         ....++..++..+|
T Consensus        22 ~eLa~~A~~~AL~dAgi~~~dID-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~lG   69 (385)
T PRK12578         22 QELAWESIKEALNDAGVSQTDIE-------LVVVGSTAYRG-------------------------IELYPAPIVAEYSG   69 (385)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc-------------------------ccCChHHHHHHHhC
Confidence            45899999999999999876543       57787643110                         00123567889999


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +++ +.+.|+++|+|++.||+.|+++|++|++|.+||+|+|.+
T Consensus        70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~  112 (385)
T PRK12578         70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKM  112 (385)
T ss_pred             CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeec
Confidence            976 678999999999999999999999999999999999973

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=98.92  E-value=4.5e-09  Score=98.02  Aligned_cols=90  Identities=20%  Similarity=0.240  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHc-CCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~dA-G~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+.+++++||+|+ |+++++++       +|++|.....                        ......++..++..+
T Consensus        28 ~eL~~~A~~~AL~da~gl~~~dID-------~vv~g~~~~~------------------------~~~g~~~~~~~a~~l   76 (406)
T PRK07851         28 DDLAAQMVRAALDKVPALDPTDID-------DLMLGCGLPG------------------------GEQGFNMARVVAVLL   76 (406)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEccccc------------------------ccccCCHHHHHHHHc
Confidence            458899999999997 99876543       5778753210                        000012456788999


Q ss_pred             CCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       220 ~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |+.+ |+++|+++|+||+.||+.|+++|++|++|.+||+|+|.
T Consensus        77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~  119 (406)
T PRK07851         77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVET  119 (406)
T ss_pred             CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEe
Confidence            9976 88999999999999999999999999999999999996

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=98.88  E-value=8.5e-09  Score=95.86  Aligned_cols=90  Identities=21%  Similarity=0.299  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+.....                      .+   ..++..++..+|
T Consensus        26 ~~L~~~a~~~al~dAgl~~~~ID-------~vv~g~~~~~~----------------------~~---~~~~~~~~~~~G   73 (394)
T PLN02644         26 TELGSIAIQAALERAGVDPALVQ-------EVFFGNVLSAN----------------------LG---QAPARQAALGAG   73 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCcCC----------------------cC---CcHHHHHHHhcC
Confidence            45889999999999999876543       57887642100                      01   113445778888


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|+++|+++|+||+.||++|+++|++|++|++||+|+|.+
T Consensus        74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~  117 (394)
T PLN02644         74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESM  117 (394)
T ss_pred             CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEec
Confidence            85  3788899999999999999999999999999999998864

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=98.88  E-value=8.7e-09  Score=96.86  Aligned_cols=92  Identities=20%  Similarity=0.278  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcc--cCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH--
Q 023909          141 LIYALVAGKKALVDAGITEQV--SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA--  216 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~--~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia--  216 (275)
                      ..|+.+++++||+|||+++++  ++       +||+|+..+...                     ..  ...++..++  
T Consensus        49 ~eL~~~a~~~al~~agl~~~d~~ID-------~vi~G~~~~~~~---------------------~~--~~~~a~~~~~~   98 (438)
T PTZ00455         49 EELLATAIQGTLENTGLDGKAALVD-------KVVVGNFLGELF---------------------SS--QGHLGPAAVGS   98 (438)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCcC-------EEEEEecccccc---------------------cc--ccchHHHHHHh
Confidence            458899999999999998654  43       578886532110                     00  012233334  


Q ss_pred             -----HHhCCC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          217 -----MDLGWT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       217 -----~~~~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                           ..+++. -|+++|+++|+||+.||+.|+++|++|++|++||+|+|.+
T Consensus        99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~m  150 (438)
T PTZ00455         99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQ  150 (438)
T ss_pred             ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeec
Confidence                 334553 4899999999999999999999999999999999999974

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=98.85  E-value=1.1e-08  Score=94.33  Aligned_cols=92  Identities=30%  Similarity=0.411  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+|||+++++++       +|++|+.....                         ....++..++..+
T Consensus        16 ~~eL~~~A~~~Al~dagl~~~~Id-------~vi~g~~~~~~-------------------------~~~~~a~~va~~l   63 (375)
T cd00829          16 PLELAAEAARAALDDAGLEPADID-------AVVVGNAAGGR-------------------------FQSFPGALIAEYL   63 (375)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEecccccc-------------------------cccchHHHHHHHc
Confidence            366899999999999999865432       57787653211                         0123567899999


Q ss_pred             CC-CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          220 GW-TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       220 ~l-~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      |+ ..|.+.|+.+|+|++.+|++|+++|++|++|.+||+|+|..-
T Consensus        64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s  108 (375)
T cd00829          64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMS  108 (375)
T ss_pred             CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecc
Confidence            99 568999999999999999999999999999999999999743

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=98.85  E-value=3.9e-08  Score=88.55  Aligned_cols=138  Identities=22%  Similarity=0.289  Sum_probs=94.4

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~  150 (275)
                      +.|+|+|...|.- .+.+++.+.+  |.. ...+  ++..++..+           .+..+     -.....|+.+++++
T Consensus         2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~-~~~~--~~~~Gi~~r-----------~~~~~-----~~~~~~la~~A~~~   60 (320)
T cd00830           2 ARILGIGSYLPERVVTNDELEKRL--DTS-DEWI--RTRTGIRER-----------RIADP-----GETTSDLAVEAAKK   60 (320)
T ss_pred             CEEEEEEEECCCcEEcHHHHHHHc--CCC-HHHh--hhccCceEE-----------eeCCC-----CCCHHHHHHHHHHH
Confidence            6799999999986 6777777765  211 0000  000001000           00000     02247799999999


Q ss_pred             HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC-CCcccccc
Q 023909          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW-TGPSYSIS  229 (275)
Q Consensus       151 Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l-~Gp~~~v~  229 (275)
                      ||+++|+++++++       .|++++..+++                         .....+.+++..+|+ +.+++.|+
T Consensus        61 al~~ag~~~~~Id-------~li~~~~~~~~-------------------------~~~~~~~~l~~~lg~~~~~~~~v~  108 (320)
T cd00830          61 ALEDAGIDADDID-------LIIVATSTPDY-------------------------LFPATACLVQARLGAKNAAAFDIN  108 (320)
T ss_pred             HHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCCcEeecc
Confidence            9999999865432       45666543211                         012356789999999 66889999


Q ss_pred             hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          230 TACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       230 taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .+|+|++.||++|+++|++|.++.+||+++|.+
T Consensus       109 ~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~  141 (320)
T cd00830         109 AACSGFLYGLSTAAGLIRSGGAKNVLVVGAETL  141 (320)
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCEEEEEEehhh
Confidence            999999999999999999999999999999983

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=98.84  E-value=1.3e-08  Score=94.42  Aligned_cols=89  Identities=20%  Similarity=0.314  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+......                        . ...+..++..+|
T Consensus        22 ~~La~~A~~~Al~dAgl~~~dID-------~vv~g~~~~~~~------------------------~-~~~a~~va~~lG   69 (386)
T TIGR01930        22 EDLGAAVIKELLERNPLDPELID-------DVIFGNVLQAGE------------------------Q-QNIARQAALLAG   69 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCCC------------------------C-ChHHHHHHHHcC
Confidence            66899999999999999875543       577776432110                        0 123556888889


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +.  .|++.|+++|+|++.||+.|+++|++|.+|.+||+|+|.
T Consensus        70 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~  112 (386)
T TIGR01930        70 LPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVES  112 (386)
T ss_pred             CCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehh
Confidence            86  489999999999999999999999999999999999986

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK05790 putative acyltransferase; Provisional

Probab=98.84  E-value=1.3e-08  Score=94.54  Aligned_cols=90  Identities=26%  Similarity=0.396  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+|||+++++++       +|++|+.....                        . ....+..+...++
T Consensus        27 ~~La~~A~~~AL~dAgl~~~dID-------~vi~g~~~~~~------------------------~-~~~~~~~~~~~~g   74 (393)
T PRK05790         27 VELGAIVIKAALERAGVPPEQVD-------EVIMGQVLQAG------------------------A-GQNPARQAALKAG   74 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------eEEEEEecCCC------------------------C-CCcHHHHHHHHcC
Confidence            55889999999999999976543       57888643110                        0 0112333555667


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.  -|++.|+++|+|++.||..|+++|++|.+|.+||+|+|.+
T Consensus        75 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~  118 (393)
T PRK05790         75 LPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESM  118 (393)
T ss_pred             CCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeecc
Confidence            75  5899999999999999999999999999999999999973

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=98.82  E-value=3.8e-08  Score=90.32  Aligned_cols=86  Identities=20%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+..+..+++  +|++ ++++       .||+|+..++                          . ..++..++...|
T Consensus        26 ~~L~~~a~~~~~--~gi~-~~Id-------~vi~G~~~~~--------------------------~-~~~~r~~~~~~G   68 (361)
T PRK06690         26 QQLAAPLLTFLS--KGME-REID-------DVILGNVVGP--------------------------G-GNVARLSALEAG   68 (361)
T ss_pred             HHHHHHHHHHHH--ccch-hhcC-------EEEEEecCCC--------------------------c-chHHHHHHHHcC
Confidence            446677777764  3874 3332       4889875321                          0 223445778888


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +.  -|+++|+++|+||+.||..|+++|++|++|++||||+|.+-
T Consensus        69 l~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms  113 (361)
T PRK06690         69 LGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTS  113 (361)
T ss_pred             CCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEecccccc
Confidence            85  59999999999999999999999999999999999999853

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=98.80  E-value=2.3e-08  Score=92.87  Aligned_cols=92  Identities=25%  Similarity=0.384  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+..+.+.                .     .....  +..+...++
T Consensus        23 ~eL~~eA~~~AL~dAgl~~~dId-------~vi~g~~~~~~~----------------~-----~~~~~--~~~~~~~~g   72 (389)
T PRK07516         23 ESLIVRVAREALAHAGIAAGDVD-------GIFLGHFNAGFS----------------P-----QDFPA--SLVLQADPA   72 (389)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCcc----------------c-----cccch--hHHHHHhcC
Confidence            45899999999999999865533       688887532211                0     00001  111223345


Q ss_pred             C-CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W-TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l-~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      + ..|++.|+++|+|++.||+.|+++|++|++|.+||+|+|.+
T Consensus        73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~  115 (389)
T PRK07516         73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKM  115 (389)
T ss_pred             CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhh
Confidence            5 35889999999999999999999999999999999999984

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=98.79  E-value=2.8e-08  Score=92.42  Aligned_cols=91  Identities=21%  Similarity=0.239  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH-HHHHH
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA-VLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~ia~~  218 (275)
                      ...|+.+++.+||+++|+++++++       .|++|+....+.                      +  . .++. .+...
T Consensus        23 ~~el~~~a~~~Al~~agl~p~dID-------~vi~g~~~~~~~----------------------g--~-~~~~~~~~~~   70 (393)
T cd00826          23 AHEAGAKAIAAALEPAGVAAGAVE-------EACLGQVLGAGE----------------------G--Q-NCAQQAAMHA   70 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEccCCcc----------------------c--C-cHHHHHHHHc
Confidence            355888899999999999876543       478887643211                      1  1 1121 24556


Q ss_pred             hCCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +++.+ |++.|+++|+|++.||+.|+++|++|++|++||+|+|.+
T Consensus        71 lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~  115 (393)
T cd00826          71 GGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKM  115 (393)
T ss_pred             CCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeecc
Confidence            67655 999999999999999999999999999999999999974

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.78  E-value=8.6e-08  Score=88.72  Aligned_cols=91  Identities=16%  Similarity=0.104  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+++|+++++++       .+++|+..+++                        ..+ ..+..|...+
T Consensus        63 ~~~La~~A~~~aL~~agi~~~dId-------~li~~s~~~~~------------------------~~p-~~a~~v~~~L  110 (378)
T PRK06816         63 NAQMAAEAIRDLLDDAGFSLGDIE-------LLACGTSQPDQ------------------------LMP-GHASMVHGEL  110 (378)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCCCc------------------------CCh-HHHHHHHhhC
Confidence            467999999999999999865432       36777653221                        111 2346788888


Q ss_pred             CCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |++. |++.|+.+|+|++.||+.|.++|++|.++.+||+|+|.+
T Consensus       111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~  154 (378)
T PRK06816        111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELA  154 (378)
T ss_pred             CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccc
Confidence            8865 888999999999999999999999999999999999984

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=98.76  E-value=3.3e-08  Score=92.87  Aligned_cols=91  Identities=21%  Similarity=0.146  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+|||+++++++       +|++|.....                      +.+  .+.....++..+|
T Consensus        38 ~eL~~eA~~~Al~dagl~~~dID-------~vv~~~~~~~----------------------~~g--~~~~~~~~~~~lG   86 (430)
T PRK06365         38 RERVKKAFDYAMNDAGLTLADID-------GSVASYFSDH----------------------FQR--QLLAGIMVQDYLG   86 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeccccc----------------------ccc--cchhhHHHHHhcC
Confidence            45899999999999999875543       4555542110                      001  1222234678889


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.. |+++|+++|+|+..||+.|++.|++|++|++||+|+|..
T Consensus        87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~  129 (430)
T PRK06365         87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETM  129 (430)
T ss_pred             CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeec
Confidence            876 888999999999999999999999999999999999964

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=98.76  E-value=1.1e-07  Score=86.18  Aligned_cols=137  Identities=19%  Similarity=0.206  Sum_probs=91.5

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|-|+|+|...|.- .+.+++-+.+......|.  .+   .++..+.           +..+.     .....|+.++++
T Consensus         2 ~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~--~~---~gi~~r~-----------~~~~~-----~~~~~la~~A~~   60 (326)
T CHL00203          2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWIS--TR---TGIKKRH-----------LAPSS-----TSLTKLAAEAAN   60 (326)
T ss_pred             ccEEEEEEEECCCeEEcHHHHHHhcCCChhhEe--ec---cCeEEEE-----------eCCCC-----CCHHHHHHHHHH
Confidence            36799999999997 566776655421111111  00   0111111           00000     123669999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~v  228 (275)
                      +||+++|+++++++       .|++|+.....                        ..  ..+..+...+|+++ +++.|
T Consensus        61 ~aL~~ag~~~~dId-------~vi~~s~~~~~------------------------~~--~~~~~v~~~Lg~~~~~~~~v  107 (326)
T CHL00203         61 KALDKAHMDPLEID-------LIILATSTPDD------------------------LF--GSASQLQAEIGATRAVAFDI  107 (326)
T ss_pred             HHHHHcCCCHHHCC-------EEEEEeCCCCC------------------------CC--chHHHHHHHhCCCCCceeee
Confidence            99999999865432       36666543211                        00  12356888888865 67899


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      ..+|+|++.||+.|.++|++|.++.+||+|+|.
T Consensus       108 ~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~  140 (326)
T CHL00203        108 TAACSGFILALVTATQFIQNGSYKNILVVGADT  140 (326)
T ss_pred             cccchhHHHHHHHHHHHHHcCCCCEEEEEEehh
Confidence            999999999999999999999999999999997

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=98.75  E-value=4e-08  Score=91.08  Aligned_cols=91  Identities=18%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHH-cCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALVD-AGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~d-AG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+.+++.++|++ +|+++++++       .||+|+....                        ......++..++...
T Consensus        26 ~~L~~~a~~~al~~~agl~~~~Id-------~v~~G~~~~~------------------------~~~g~~~ar~~~~~~   74 (385)
T TIGR02445        26 EDLSAHLMSKLLARNPKVDPAEVE-------DIYWGCVQQT------------------------LEQGFNIARNAALLA   74 (385)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHcC-------EEEEeccccc------------------------ccccchHHHHHHHHC
Confidence            45889999999995 699876544       5899864210                        000112555566666


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.  -|+++|+++|+||+.||+.|+++|++|++|++||||+|.+
T Consensus        75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~m  119 (385)
T TIGR02445        75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHM  119 (385)
T ss_pred             CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhc
Confidence            664  4779999999999999999999999999999999999974

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.74  E-value=5.1e-08  Score=88.38  Aligned_cols=91  Identities=21%  Similarity=0.170  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+++|+++++++       .|++++..+++                        . ....+.+|+..+
T Consensus        52 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~~~------------------------~-~p~~a~~v~~~l   99 (329)
T PRK07204         52 SSYMGAEAAKKAVEDAKLTLDDID-------CIICASGTIQQ------------------------A-IPCTASLIQEQL   99 (329)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCC------------------------C-CccHHHHHHHHh
Confidence            356999999999999999865432       35666543211                        1 124577899999


Q ss_pred             CCCC---cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWTG---PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~G---p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+++   |++.|+.+|+|++.||++|.++|++|.++.+||.++|..
T Consensus       100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~  145 (329)
T PRK07204        100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEIS  145 (329)
T ss_pred             CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccc
Confidence            9975   899999999999999999999999999999999999973

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=98.73  E-value=3.9e-08  Score=91.75  Aligned_cols=93  Identities=25%  Similarity=0.270  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +|++|+..+++..               .    ....... ..  ....+
T Consensus        27 ~eLa~eA~~~AL~dAgl~~~dID-------~vi~g~~~~~~~~---------------~----~~~~~~~-~~--~~~~~   77 (403)
T PRK06289         27 ADLTREVVDGTLAAAGVDADDIE-------VVHVGNFFGELFA---------------G----QGHLGAM-PA--TVHPA   77 (403)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc---------------c----ccccchH-HH--HHhhc
Confidence            55899999999999999976543       6788875332100               0    0000111 11  12223


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.| |++.|+++|+|++.||+.|+.+|++|++|.+||+|+|..
T Consensus        78 ~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~  120 (403)
T PRK06289         78 LWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELM  120 (403)
T ss_pred             CCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEec
Confidence            433 899999999999999999999999999999999999873

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=98.73  E-value=4.9e-08  Score=86.93  Aligned_cols=85  Identities=20%  Similarity=0.175  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+|+++||++||+++++++       .+|+|+..                          .  ....+..++..+|
T Consensus        51 ~eLa~eAa~~ALekAGL~~~DID-------~IIvGdl~--------------------------~--Q~~~As~vA~~LG   95 (327)
T TIGR02845        51 RKLMEDAVNLALKKANLKKDDVD-------FFLAGDLL--------------------------N--QIITANFVARDLG   95 (327)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeCCC--------------------------C--cccHHHHHHHHhC
Confidence            56899999999999999865432       35565310                          0  0134778888888


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  |.+-|.+||+|+..||..|+.+|++|.+|.|||++++..
T Consensus        96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~  135 (327)
T TIGR02845        96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHY  135 (327)
T ss_pred             C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEeccc
Confidence            6  889999999999999999999999999999999998874

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=98.72  E-value=1.9e-07  Score=86.44  Aligned_cols=138  Identities=20%  Similarity=0.195  Sum_probs=91.6

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ..+.|+|+|...|.- .+.+++-+.+-.....+.+     ..++..+.           +..+.     .....|+.+++
T Consensus        46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~-----~tGi~~R~-----------~~~~~-----~~~~~La~~Aa  104 (379)
T PLN02326         46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIAT-----RTGIRNRR-----------VLSGD-----ETLTSLAVEAA  104 (379)
T ss_pred             CCcEEEEEEEECCCceecHHHHHHhcCCchhheec-----ccCcceEe-----------ecCCC-----CCHHHHHHHHH
Confidence            468899999999996 5666665543211110100     00111111           00000     12467999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-cccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~  227 (275)
                      ++||+++|+++++++       -|++++..+..                         .. ..+..+...+|+++ +++.
T Consensus       105 ~~aL~~agi~~~dId-------~li~~s~~~~~-------------------------~~-~~a~~v~~~LG~~~~~~~d  151 (379)
T PLN02326        105 KKALEMAGVDPEDVD-------LVLLCTSSPDD-------------------------LF-GSAPQVQAALGCTNALAFD  151 (379)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEeCCCCc-------------------------cC-cHHHHHHHHhCCCCCceee
Confidence            999999999864432       24555432110                         01 13567889999865 6788


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |+.+|+|++.||++|.++|++|.++.+||+|+|.
T Consensus       152 v~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~  185 (379)
T PLN02326        152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGADA  185 (379)
T ss_pred             ccccchHHHHHHHHHHHHHHcCCCCEEEEEEech
Confidence            9999999999999999999999999999999997

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.70  E-value=7.5e-08  Score=87.01  Aligned_cols=139  Identities=19%  Similarity=0.228  Sum_probs=94.1

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .+.|.|+|...|.- .+.+++.+........   +  ++..++..+.           +..+.     .....|+.+++.
T Consensus         4 ~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~---i--~~~~Gi~~r~-----------~~~~~-----~~~~~la~~A~~   62 (325)
T PRK12879          4 YARITGIGTYVPPRVLTNDDLETFIDTSDEW---I--VQRTGIKERR-----------IAHVE-----EYTSDLAIKAAE   62 (325)
T ss_pred             CCEEEEEEEECCCcEEcHHHHHHhcCCCHHH---h--hhccCceEEE-----------ECCCC-----CCHHHHHHHHHH
Confidence            57899999999996 6777766543210000   0  0000111111           00000     124678999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp~~~v  228 (275)
                      +||+++|+++++++       .|++++...++                         .....+.+++..+|++ .+++.|
T Consensus        63 ~al~~ag~~~~~Id-------~li~~~~~~~~-------------------------~~~~~a~~l~~~lg~~~~~~~~v  110 (325)
T PRK12879         63 RALARAGLDAEDID-------LIIVATTTPDY-------------------------LFPSTASQVQARLGIPNAAAFDI  110 (325)
T ss_pred             HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCChHHHHHHHHhCCCCCcEEEE
Confidence            99999999865432       35566543211                         1123567899999997 588999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.+|+|++.||+.|.++|++|.++.|||+++|..
T Consensus       111 ~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~  144 (325)
T PRK12879        111 NAACAGFLYGLETANGLITSGLYKKVLVIGAERL  144 (325)
T ss_pred             CccchHHHHHHHHHHHHHHcCCCCEEEEEEehhh
Confidence            9999999999999999999999999999999973

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=98.68  E-value=7.9e-08  Score=86.67  Aligned_cols=137  Identities=20%  Similarity=0.159  Sum_probs=94.7

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~  150 (275)
                      |.|+++|...|.- .+.+++.+.+..  ..+..     ..+...+.      |-    . +     -.....|+.+++++
T Consensus         2 v~I~~i~~~lP~~~v~~~~~~~~~~~--~~~~~-----~~gi~~r~------~~----~-~-----~~~~~~l~~~a~~~   58 (324)
T cd00827           2 VGIEAIGAYLPRYRVDNEELAEGLGV--DPGKY-----TTGIGQRH------MA----G-D-----DEDVPTMAVEAARR   58 (324)
T ss_pred             ccEEEEEecCCceeecHHHHHHHhCC--Cccee-----eeecceeE------ec----C-C-----CCCHHHHHHHHHHH
Confidence            6799999999986 677777665421  10000     00011011      00    0 0     11236689999999


Q ss_pred             HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC-CCcccccc
Q 023909          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW-TGPSYSIS  229 (275)
Q Consensus       151 Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l-~Gp~~~v~  229 (275)
                      ||+++|+++++++       .|++|+.....                        . ....+.+++..+|+ ..|++.|+
T Consensus        59 aL~~ag~~~~~Id-------~li~~~~~~~~------------------------~-~~~~~~~i~~~lg~~~~~~~~v~  106 (324)
T cd00827          59 ALERAGIDPDDIG-------LLIVATESPID------------------------K-GKSAATYLAELLGLTNAEAFDLK  106 (324)
T ss_pred             HHHHcCCCHHHCC-------EEEEEcCCCCC------------------------C-CccHHHHHHHHcCCCCCceeehh
Confidence            9999999865432       46676643211                        0 12356789999999 57899999


Q ss_pred             hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          230 TACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       230 taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      .+|+|++.||..|+++|++|.++.+||+++|.+.
T Consensus       107 ~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~  140 (324)
T cd00827         107 QACYGGTAALQLAANLVESGPWRYALVVASDIAS  140 (324)
T ss_pred             hhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhh
Confidence            9999999999999999999999999999999853

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=98.67  E-value=8.7e-08  Score=88.96  Aligned_cols=91  Identities=23%  Similarity=0.218  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       ++++|+....+                      .+  ....+..++..+|
T Consensus        30 ~~L~~~A~~~Al~dagl~~~dID-------~~i~~~~~~~~----------------------~~--~~~~a~~l~~~lG   78 (392)
T PRK06065         30 QELAWEAASKALDEAGLELKDID-------CVVIGSAPDAF----------------------DG--VHMKGEYLSHGSG   78 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCcc----------------------cc--cccHHHHHHHHcC
Confidence            45899999999999999865533       57776521100                      01  1234556888888


Q ss_pred             CC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +. .|.+.|+++|+|+..+|..|+.+|++|.+|.+||.|+|.+
T Consensus        79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~  121 (392)
T PRK06065         79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKM  121 (392)
T ss_pred             CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecc
Confidence            76 6899999999999999999999999999999999998863

>PRK08304 stage V sporulation protein AD; Validated

Probab=98.66  E-value=1.1e-07  Score=84.96  Aligned_cols=85  Identities=20%  Similarity=0.179  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+|+.+||++||+++++++       .+|+|...                          +.  ...++.++..++
T Consensus        57 seLa~eAa~~ALekAGI~~~DID-------~lI~Gdll--------------------------~Q--~~sAs~vA~~LG  101 (337)
T PRK08304         57 RKMMEDAIQQALQKANLKKSDID-------YLLAGDLL--------------------------NQ--IISANFAARELG  101 (337)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCC--------------------------CC--cchHHHHHHHhC
Confidence            56999999999999999865433       35555310                          00  134667777787


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  |.+-|.+||+++..||.+|+.+|++|.+|.+||.+++..
T Consensus       102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~  141 (337)
T PRK08304        102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHF  141 (337)
T ss_pred             C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchh
Confidence            6  999999999999999999999999999999999998874

>PLN03172 chalcone synthase family protein; Provisional

Probab=98.65  E-value=4.5e-07  Score=84.22  Aligned_cols=160  Identities=13%  Similarity=0.086  Sum_probs=102.5

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHH---cC--CCceee-CC-CCCCCCCCcceeeecCC-CC--CCC------CCCHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLL---EG--VTGISD-IQ-GFDCSEFPTRIAAEIKS-LS--TGG------WISPK  132 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~---~g--~~~i~~-~~-~~~~~~~~~~~~g~i~~-fd--~~~------~i~~~  132 (275)
                      -+..|.|+|...|.- ..-+++.+.+.   +.  ...++. +. -|+..+...++....++ ++  +..      -+..+
T Consensus        15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r   94 (393)
T PLN03172         15 GPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDAR   94 (393)
T ss_pred             CCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHH
Confidence            347899999999986 44444444443   22  111221 11 02233343333322111 11  111      13344


Q ss_pred             HHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 023909          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (275)
Q Consensus       133 ~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (275)
                      ......-...|+.+|+.+||+++|+++++++       .|+++++.+ +                        ..+ ..+
T Consensus        95 ~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId-------~ii~~t~t~-~------------------------~~P-~~a  141 (393)
T PLN03172         95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSG-V------------------------DMP-GAD  141 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC-C------------------------cCc-hHH
Confidence            4455566778999999999999999854422       245555432 1                        122 468


Q ss_pred             HHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       213 ~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .+|...||++.-   .+.++.+|++++.+|..|.+.+++|....+||.++|.+
T Consensus       142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~  194 (393)
T PLN03172        142 YQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEIT  194 (393)
T ss_pred             HHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehh
Confidence            899999999874   35678999999999999999999999999999999984

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=98.65  E-value=8.4e-08  Score=88.99  Aligned_cols=91  Identities=26%  Similarity=0.217  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       ++++++. .++                     +.+.  ...+..++..+|
T Consensus        25 ~eL~~eAa~~Al~dAgl~~~dID-------~iv~~~~-~~~---------------------~~~~--~~~~~~va~~LG   73 (386)
T PRK08313         25 AGLVREAIDRALADAGLTWDDID-------AVVVGKA-PDF---------------------FEGV--MMPELFLADALG   73 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecc-ccc---------------------cccc--cCchHHHHHhcC
Confidence            45889999999999999865533       5677652 111                     0010  112357889999


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +++ |.+.|+++|+|+..+++.|++.|++|++|.+||.|+|..
T Consensus        74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~  116 (386)
T PRK08313         74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQ  116 (386)
T ss_pred             CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEc
Confidence            975 888999999999999999999999999999999999863

>PLN03169 chalcone synthase family protein; Provisional

Probab=98.63  E-value=6.8e-07  Score=83.07  Aligned_cols=92  Identities=13%  Similarity=0.021  Sum_probs=71.7

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 023909          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (275)
Q Consensus       138 d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (275)
                      .....|+.+|+.+||+++|+++++++       .|++++. .++                         .....+..|..
T Consensus       104 e~~~~La~~Aa~~aL~~ag~~~~dId-------~lI~~t~-t~~-------------------------~~P~~a~~l~~  150 (391)
T PLN03169        104 EAVTQMAVEASLACIKEWGRPVSDIT-------HLVYVSS-SEA-------------------------RLPGGDLYLAK  150 (391)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECc-CCC-------------------------CCCcHHHHHHH
Confidence            34567999999999999999865432       3455543 221                         11234678999


Q ss_pred             HhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          218 DLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       218 ~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .||++..   .+.++.+|+++++||..|..+|++|..+.|||.++|.+
T Consensus       151 ~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~  198 (391)
T PLN03169        151 QLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETT  198 (391)
T ss_pred             HhCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC
Confidence            9999753   47889999999999999999999999999999999983

>PLN03168 chalcone synthase; Provisional

Probab=98.62  E-value=5.1e-07  Score=83.81  Aligned_cols=100  Identities=16%  Similarity=0.092  Sum_probs=78.4

Q ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 023909          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (275)
Q Consensus       130 ~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
                      ..+......-...|+.+|+.+||+++|+++++++       .|+++++.+ +                        .. .
T Consensus        91 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg-~------------------------~~-P  137 (389)
T PLN03168         91 NVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT-------HIVFATTSG-V------------------------NM-P  137 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC-C------------------------CC-c
Confidence            3344445556678999999999999999865432       456666532 1                        12 2


Q ss_pred             HHHHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          210 MASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       210 ~~a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .++.+|+..||++.-   ++.++.+|+++++||..|...|++|....|||.++|.+
T Consensus       138 s~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~  193 (389)
T PLN03168        138 GADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVT  193 (389)
T ss_pred             cHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehh
Confidence            358889999999763   68899999999999999999999999999999999983

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=98.58  E-value=2.7e-07  Score=84.32  Aligned_cols=91  Identities=21%  Similarity=0.234  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+++|+++||++||+++++++       .+++++..+++.                        . ...+..+...+
T Consensus        50 ~~~la~~Aa~~aL~~agl~~~dID-------~li~~s~~~~~~------------------------~-p~~a~~v~~~L   97 (345)
T TIGR00748        50 TATIGVEAARNALKRAKIDPKDIG-------AVYVGSESHPYA------------------------V-KPTATIVAEAI   97 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCcc------------------------c-cchHHHHHHHc
Confidence            367999999999999999865533       466666432210                        1 12356788999


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |++  -+++.|..+|+++..||+.|..+|++|.++.+||.++|..
T Consensus        98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~  142 (345)
T TIGR00748        98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTA  142 (345)
T ss_pred             CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeec
Confidence            985  3788899999999999999999999999999999999974

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PLN03170 chalcone synthase; Provisional

Probab=98.56  E-value=8.5e-07  Score=82.64  Aligned_cols=159  Identities=13%  Similarity=0.077  Sum_probs=103.3

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHc-----CCCceee-CC-CCCCCCCCcceeeecCC---CCCCC-----C-CCHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISD-IQ-GFDCSEFPTRIAAEIKS---LSTGG-----W-ISPKI  133 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~-----g~~~i~~-~~-~~~~~~~~~~~~g~i~~---fd~~~-----~-i~~~~  133 (275)
                      +..|.|+|...|.- ..-+++++.+..     .....+. +. -|+..+...++....++   .++.+     . +..+.
T Consensus        20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~   99 (401)
T PLN03170         20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ   99 (401)
T ss_pred             CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence            46799999999986 444555555543     1111121 11 12333443333322111   11111     1 33444


Q ss_pred             HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHH
Q 023909          134 AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASA  213 (275)
Q Consensus       134 ~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  213 (275)
                      .....-...|+.+|+.+||+++|+++++++       .|++.++.+ +                        . ...++.
T Consensus       100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg-~------------------------~-~Ps~a~  146 (401)
T PLN03170        100 DIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-------HLVFCTTSG-V------------------------D-MPGADY  146 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC-C------------------------C-CChHHH
Confidence            445555678999999999999999864432       245555422 1                        1 224688


Q ss_pred             HHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          214 VLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       214 ~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|...||++.-   .+.++.+|++++.+|..|.+.+++|....|||.++|.+
T Consensus       147 ~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~  198 (401)
T PLN03170        147 QLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEIT  198 (401)
T ss_pred             HHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehh
Confidence            99999999765   58899999999999999999999999999999999983

>PRK06840 hypothetical protein; Validated

Probab=98.56  E-value=5.4e-07  Score=82.04  Aligned_cols=138  Identities=17%  Similarity=0.108  Sum_probs=89.6

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|.|+|+|...|.- .+.+++-+..-....-+.  .+   .++..+.            +...    -.....|+.++++
T Consensus         4 ~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~--~~---~Gi~~r~------------~~~~----~~~~~~la~~Aa~   62 (339)
T PRK06840          4 NVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVI--EK---FGIYEKP------------VPGP----EDHTSDMAIAAAK   62 (339)
T ss_pred             ceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHh--hh---cCcceEe------------eCCC----CCCHHHHHHHHHH
Confidence            78999999999996 566665443211100000  00   0111000            0000    1224679999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEe-ecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-cccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIG-SAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYS  227 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~  227 (275)
                      +||+++|+++++++       .+++. +...+                         ......+.+|+..+|++. +++.
T Consensus        63 ~aL~~ag~~~~dId-------~li~~~~~~~~-------------------------~~~p~~a~~l~~~lGl~~~~~~~  110 (339)
T PRK06840         63 PALKQAGVDPAAID-------VVIYIGSEHKD-------------------------YPVWSSAPKIQHEIGAKNAWAFD  110 (339)
T ss_pred             HHHHHcCCCHHHCC-------EEEEeccCCCC-------------------------CCCCchHHHHHHHhCCCCccccc
Confidence            99999999865432       23333 22111                         111123678999999965 7888


Q ss_pred             cchhhhHHHHHHHHHHHHHHc-CCCCEEEEeccCC
Q 023909          228 ISTACASSNYSILNATSHIIK-GDTDIMLCGGSDG  261 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~-G~~d~alvGgvd~  261 (275)
                      |..+|++++.||..|+++|++ |.++.+||.+.|.
T Consensus       111 v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~  145 (339)
T PRK06840        111 IMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYR  145 (339)
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCccEEEEEeecc
Confidence            999999999999999999999 9999999998776

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=98.56  E-value=3.4e-07  Score=80.50  Aligned_cols=91  Identities=26%  Similarity=0.363  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      .++|.-.+...||+.+.+++.+.+       -||+|.-.                         .......++.+.+.--
T Consensus        30 A~~Lgsvaikaalera~v~~~~v~-------eVi~GnVl-------------------------~AnlGQapaRQaalgA   77 (396)
T KOG1390|consen   30 ATELGSVAIKAALERAVVPPSDVA-------EVIFGNVL-------------------------SANLGQAPARQAALGA   77 (396)
T ss_pred             hhhHHHHHHHHHHHhcCCCHHHhh-------hhhhcccc-------------------------ccccCcchHHHHHhhc
Confidence            356778899999999988764322       26776521                         1233345667777666


Q ss_pred             CC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ||  .-|+.+|+--|+||+.||.+|++.|+.|..|++++||.|.+
T Consensus        78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsM  122 (396)
T KOG1390|consen   78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESM  122 (396)
T ss_pred             CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchh
Confidence            65  55899999999999999999999999999999999999984

>PRK04262 hypothetical protein; Provisional

Probab=98.55  E-value=3e-07  Score=84.08  Aligned_cols=138  Identities=20%  Similarity=0.228  Sum_probs=92.4

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|-|.|+|...|.- .+.+++-+.+-....-+.+     ..++..+.           +..+     -.....|+.+|+.
T Consensus         2 ~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~-----~~Gi~~R~-----------~~~~-----~~~~~~la~~Aa~   60 (347)
T PRK04262          2 MVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKR-----GLGVEEKS-----------VPGP-----DEDTATIAVEAAR   60 (347)
T ss_pred             ceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhh-----ccCeeeee-----------cCCC-----CcCHHHHHHHHHH
Confidence            46799999999996 6777776654211000000     00111000           0001     1123679999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--cccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSYS  227 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G--p~~~  227 (275)
                      +||++||+++++++       .|++++..+.+                        ..+ ..+.+++..+|++.  +++.
T Consensus        61 ~aL~~ag~~~~dId-------~li~~s~~~~~------------------------~~p-~~a~~v~~~Lgl~~~~~~~d  108 (347)
T PRK04262         61 NALKRAGIDPKEIG-------AVYVGSESHPY------------------------AVK-PTATIVAEALGATPDLTAAD  108 (347)
T ss_pred             HHHHHcCCCHHHCC-------EEEEEecCCCc------------------------ccc-cHHHHHHHHcCCCCCceEEE
Confidence            99999999865432       46666643221                        111 23557889999964  6788


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      ++.+|++++.||+.|.++|++|.++.+||.++|.
T Consensus       109 v~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~  142 (347)
T PRK04262        109 LEFACKAGTAALQAAMGLVKSGMIKYALAIGADT  142 (347)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence            9999999999999999999999999999999887

>PLN03173 chalcone synthase; Provisional

Probab=98.51  E-value=1.7e-06  Score=80.33  Aligned_cols=160  Identities=13%  Similarity=0.091  Sum_probs=101.3

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHc-----CCCceee-CCC-CCCCCCCcceeeecCC-CC--CCCC------CCHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISD-IQG-FDCSEFPTRIAAEIKS-LS--TGGW------ISPK  132 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~-----g~~~i~~-~~~-~~~~~~~~~~~g~i~~-fd--~~~~------i~~~  132 (275)
                      .+..|.|+|...|.- ..-+++++.+..     .....+. +.+ |+..+...++....++ ++  +..+      +..+
T Consensus        15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r   94 (391)
T PLN03173         15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDAR   94 (391)
T ss_pred             CCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHH
Confidence            347799999999986 444445544432     2221221 111 2333333333222111 11  1000      2233


Q ss_pred             HHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHH
Q 023909          133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMAS  212 (275)
Q Consensus       133 ~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (275)
                      ......-...|+.+|+.+||+++|+++++++       -|++.++.+ +                        .. ...+
T Consensus        95 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~-~------------------------~~-P~~a  141 (391)
T PLN03173         95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSG-V------------------------DM-PGAD  141 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC-C------------------------cc-cHHH
Confidence            3344455668999999999999999865432       345555421 1                        11 2467


Q ss_pred             HHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          213 AVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       213 ~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .+|...+|++.-   .+.++.+|++++.+|..|.+.|+.|..+.|||.++|.+
T Consensus       142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~  194 (391)
T PLN03173        142 YQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEIT  194 (391)
T ss_pred             HHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehh
Confidence            889999999874   46789999999999999999999999999999999983

>PLN03171 chalcone synthase-like protein; Provisional

Probab=98.49  E-value=2.5e-06  Score=79.55  Aligned_cols=97  Identities=15%  Similarity=0.096  Sum_probs=74.3

Q ss_pred             HHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHH
Q 023909          132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMA  211 (275)
Q Consensus       132 ~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (275)
                      +...+......|+.+|+.+||+++|+++++++       -|++++..+.                         .. ...
T Consensus       100 r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~~-------------------------~~-P~~  146 (399)
T PLN03171        100 RLDIAADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSGA-------------------------HI-PGV  146 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CC-Cch
Confidence            33344456678999999999999999865432       3555554321                         11 245


Q ss_pred             HHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          212 SAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       212 a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +..+...||++.-   .+.+..+|++++++|..|..+|++|..+.|||.++|.
T Consensus       147 a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~  199 (399)
T PLN03171        147 DFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEI  199 (399)
T ss_pred             HHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEec
Confidence            6789999999753   4566679999999999999999999999999999998

>PRK06158 thiolase; Provisional

Probab=98.47  E-value=6.8e-07  Score=82.93  Aligned_cols=85  Identities=25%  Similarity=0.184  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       ++++|+...                          ..   ....++..+|
T Consensus        29 ~eL~~eA~~~Al~dAgl~~~dID-------~iv~~~~~~--------------------------~~---~~~~la~~lG   72 (384)
T PRK06158         29 MELLAQAAHRALADAGLTMADVD-------GLFTASPDD--------------------------AL---WGLSVAEYLG   72 (384)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCCC--------------------------CC---cHHHHHHHcC
Confidence            45899999999999999865543       567765210                          01   1235788889


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEe-ccCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCG-GSDG  261 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvG-gvd~  261 (275)
                      +++ |.+.+.++|+|+..+|+.|+++|++|.+|.+||+ |.+.
T Consensus        73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~  115 (384)
T PRK06158         73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQ  115 (384)
T ss_pred             CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeecccc
Confidence            865 6778889999999999999999999999999985 6653

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=98.46  E-value=1.3e-06  Score=80.32  Aligned_cols=156  Identities=13%  Similarity=0.128  Sum_probs=98.8

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCc---------eeeCCCCCCCCCCcceeee---cCCCCCC----CCCCHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTG---------ISDIQGFDCSEFPTRIAAE---IKSLSTG----GWISPKIA  134 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~---------i~~~~~~~~~~~~~~~~g~---i~~fd~~----~~i~~~~~  134 (275)
                      ++|+|+|...|.- .+.+++++.+......         +..+  ++..++..++-..   -+.+++.    .-+..+..
T Consensus         2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (361)
T cd00831           2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRL--CAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND   79 (361)
T ss_pred             cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHH--HhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence            5799999999996 6777887776532211         0111  0001111111100   0001100    00222333


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      ........|+.+|+.+||+++|+++++++       .|+++++.+                          ......+.+
T Consensus        80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id-------~li~~s~~~--------------------------~~~P~~a~~  126 (361)
T cd00831          80 IALEEARELAEEAARGALDEAGLRPSDID-------HLVVNTSTG--------------------------NPTPSLDAM  126 (361)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECCCC--------------------------CCCCCHHHH
Confidence            33445678999999999999999864432       344544321                          112345678


Q ss_pred             HHHHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          215 LAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       215 ia~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |...+|++.  +++.|. .+|++++.||+.|..+|+.|..+.|||.++|..
T Consensus       127 i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~  177 (361)
T cd00831         127 LINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELC  177 (361)
T ss_pred             HHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecc
Confidence            999999974  678898 899999999999999999999999999999973

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.44  E-value=2.8e-06  Score=76.90  Aligned_cols=135  Identities=21%  Similarity=0.311  Sum_probs=90.3

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCC--CCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFD--CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~--~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      .|.|+|+|...|.- .+.+++-+.+  |.+     +.|-  ..++..+.           +..+.     .....|+.+|
T Consensus         3 ~~~I~~~g~~lP~~~v~~~~~~~~~--~~~-----~~~i~~~~Gi~~r~-----------~~~~~-----e~~~~la~~A   59 (326)
T PRK05963          3 SSRIAGFGHAVPDRRVENAEIEAQL--GLE-----TGWIERRTGIRCRR-----------WAAPD-----ETLSDLAASA   59 (326)
T ss_pred             ccEEEEEEEECCCCeecHHHHHHHc--CCC-----HHHhhhccCCeEEE-----------EcCCC-----CCHHHHHHHH
Confidence            46799999999996 5666665543  111     1110  00111111           00010     1236799999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cccc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSY  226 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp~~  226 (275)
                      +++||+++|+++++++       -|++++..+++                         .....+.+|+..+|++ -+++
T Consensus        60 a~~aL~~ag~~~~~Id-------~li~~t~~~d~-------------------------~~p~~a~~v~~~Lg~~~~~~~  107 (326)
T PRK05963         60 GDMALSDAGIERSDIA-------LTLLATSTPDH-------------------------LLPPSAPLLAHRLGLQNSGAI  107 (326)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEECCCCCC-------------------------CCCcHHHHHHHHhCCCCCcee
Confidence            9999999999865432       35566643221                         1123467899999984 4788


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      .|+.+|++++.||+.|..+|++|. +.+||.++|.
T Consensus       108 di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~  141 (326)
T PRK05963        108 DLAGACAGFLYALVLADGFVRAQG-KPVLVVAANI  141 (326)
T ss_pred             eccchhhHHHHHHHHHHHHHHcCC-CeEEEEEech
Confidence            999999999999999999999985 8899999887

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=98.42  E-value=4.3e-07  Score=84.35  Aligned_cols=54  Identities=30%  Similarity=0.525  Sum_probs=50.1

Q ss_pred             hHHHHHHHHHhCCCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          209 NMASAVLAMDLGWTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       209 ~~~a~~ia~~~~l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ..++..++...|+.+  |.++|+.+|+||+.|++.|++.|++|++|++||||+|.+
T Consensus        67 ~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~m  122 (392)
T COG0183          67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKM  122 (392)
T ss_pred             ccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeec
Confidence            456778899999987  999999999999999999999999999999999999874

>PRK12404 stage V sporulation protein AD; Provisional

Probab=98.37  E-value=2.1e-06  Score=76.41  Aligned_cols=86  Identities=20%  Similarity=0.187  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+|+.+||++||+++++++       -+|+|+..+                            ..++++.++..+|
T Consensus        55 ~~L~~EA~~~AL~kAGI~~~DID-------~i~vGdL~n----------------------------Q~ipssfvar~LG   99 (334)
T PRK12404         55 RKLLEEACSRAIEKAKLRKEDIQ-------FFLAGDLMN----------------------------QITPTSFAARTLG   99 (334)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC----------------------------CcCcHHHHHHHhC
Confidence            46999999999999999865533       466666421                            1133446777777


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +  |.+-|.+|||++..||.+|+.+|++|.+|.|||+.+.-..
T Consensus       100 I--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~  140 (334)
T PRK12404        100 I--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNA  140 (334)
T ss_pred             C--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccc
Confidence            4  6799999999999999999999999999999998876543

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=98.36  E-value=1.5e-06  Score=80.58  Aligned_cols=86  Identities=20%  Similarity=0.079  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +++.+..   ..                      ..    ....++..+|
T Consensus        26 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~---~~----------------------~~----~~~~~~~~lG   69 (388)
T PRK08142         26 AQLHAEVAKGALADAGLSLADVD-------GYFCAGD---AP----------------------GL----GPASMVDYLG   69 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEcCC---CC----------------------Cc----cHHHHHHhCC
Confidence            45899999999999999865432       2333111   00                      00    0134888899


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +++ |...+.++|+|+..+|..|+.+|++|++|.|||.|+|..
T Consensus        70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~  112 (388)
T PRK08142         70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRP  112 (388)
T ss_pred             CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeec
Confidence            876 678899999999999999999999999999999998863

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.35  E-value=1.9e-06  Score=79.12  Aligned_cols=141  Identities=15%  Similarity=0.104  Sum_probs=93.5

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCce-eeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGI-SDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i-~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      +.+.|+|+|...|.- .+.+++.+.+....... ..+  ++..+...+.           +..+     -.....|+.+|
T Consensus         6 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i--~~~~Gi~~R~-----------~~~~-----~e~~~~la~~A   67 (353)
T PRK12880          6 DKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRM--KKVIGLNTRY-----------ICDE-----NTCVSDLGKHA   67 (353)
T ss_pred             cccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhh--hhccCceEEE-----------eCCC-----CCCHHHHHHHH
Confidence            457899999999986 56666555543211100 000  0001111111           0000     01246799999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--cc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PS  225 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G--p~  225 (275)
                      +.+||+++|+++++++       .|++++..+++                         .....+.+|+..||++.  ++
T Consensus        68 a~~aL~~a~~~~~dId-------~lI~~t~t~d~-------------------------~~P~~a~~v~~~Lg~~~~~~~  115 (353)
T PRK12880         68 ANTLLQGLNIDKNSLD-------ALIVVTQSPDF-------------------------FMPSTACYLHQLLNLSSKTIA  115 (353)
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCCceE
Confidence            9999999999865432       35566654322                         22356888999999963  67


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +-|+.+|++++++|+.|..+|++|..+ +||.++|.
T Consensus       116 ~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~  150 (353)
T PRK12880        116 FDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDT  150 (353)
T ss_pred             EehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehh
Confidence            889999999999999999999999999 88888886

>PRK07855 lipid-transfer protein; Provisional

Probab=98.34  E-value=2e-06  Score=79.86  Aligned_cols=82  Identities=21%  Similarity=0.184  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||+|||+++++++       +++++...                           ...   ...++..+|
T Consensus        25 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~---------------------------~~~---~~~l~~~lG   67 (386)
T PRK07855         25 LRLACEAVLAALDDAGLAPSDVD-------GLVTFTMD---------------------------TNP---EIAVARALG   67 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCc---------------------------ccc---HHHHHHHCC
Confidence            44889999999999999865433       45553210                           000   124888899


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEecc
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGS  259 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgv  259 (275)
                      +++  |...|.++|+|+..+|+.|+.+|++|.||+|||.|+
T Consensus        68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~  108 (386)
T PRK07855         68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRA  108 (386)
T ss_pred             CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEee
Confidence            987  345789999999999999999999999999999988

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=98.24  E-value=4.5e-06  Score=79.86  Aligned_cols=89  Identities=19%  Similarity=0.196  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHcCCC--CcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          141 LIYALVAGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~--~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ..|+.+++++||+|||+.  +++++       +++++.....                          ..+.....++..
T Consensus        28 ~~L~~eA~~~Al~DAGl~~~~~dID-------~v~v~~~~~~--------------------------~~~~~~~~la~~   74 (498)
T PRK08257         28 VDLMAAAARAAAADAGADAVLEAID-------SVAVVNQLSW--------------------------RYRDPPGLLAER   74 (498)
T ss_pred             HHHHHHHHHHHHHhcCCCcCHHHCC-------EEEEeccccc--------------------------cccCHHHHHHHH
Confidence            458999999999999997  55433       5666643110                          011234678888


Q ss_pred             hCCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|+.. +.....++++|+..+|+.|+.+|++|++|+|||+|+|..
T Consensus        75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~  119 (498)
T PRK08257         75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQ  119 (498)
T ss_pred             cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeec
Confidence            99854 444466788899999999999999999999999999973

>PLN02932 3-ketoacyl-CoA synthase

Probab=98.22  E-value=6e-06  Score=78.13  Aligned_cols=156  Identities=12%  Similarity=0.125  Sum_probs=103.5

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCC---C--------Cccee--eecCCCCCCCC-CCH
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSE---F--------PTRIA--AEIKSLSTGGW-ISP  131 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~---~--------~~~~~--g~i~~fd~~~~-i~~  131 (275)
                      .++|+.+.+.|.-|.-   .+.+.|-+....-+.    ...|+.+.   +        .+..+  ..+   +.... +++
T Consensus        65 ~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~f~~~i~~rsGig~~t~~---p~~~~~~~~  137 (478)
T PLN02932         65 PKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVRE----AGAWKQESDYLMDFCEKILERSGLGQETYI---PEGLQCLPL  137 (478)
T ss_pred             CCcEEEEeeeeecCcccccccHHHHHHHHHhhcc----cCCCCccchhHHHHHHHHHHHcCCCCceee---ccccccCCH
Confidence            4689999999999985   477777776643321    01122111   0        01110  011   11111 233


Q ss_pred             H--HHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 023909          132 K--IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (275)
Q Consensus       132 ~--~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
                      +  ..........++..|+.+||+++|++|++++       -|++.++.+                          ....
T Consensus       138 ~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId-------~lIv~tst~--------------------------~~~P  184 (478)
T PLN02932        138 QQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIG-------ILVVNSSTF--------------------------NPTP  184 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCC
Confidence            2  2333445678999999999999999865432       344555431                          1223


Q ss_pred             HHHHHHHHHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCCh
Q 023909          210 MASAVLAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP  265 (275)
Q Consensus       210 ~~a~~ia~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p  265 (275)
                      .++..|...+|++.  .++-++ .||++++.+|..|.++|+.|....|||.++|. +++
T Consensus       185 slaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~-~S~  242 (478)
T PLN02932        185 SLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN-ITQ  242 (478)
T ss_pred             cHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEee-ccc
Confidence            56888999999973  688898 89999999999999999999999999999998 443

>PLN02192 3-ketoacyl-CoA synthase

Probab=98.13  E-value=1.2e-05  Score=76.49  Aligned_cols=152  Identities=14%  Similarity=0.165  Sum_probs=99.2

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CcceeeecCCCCCCCC-CCHH--HH
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISPK--IA  134 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~~--~~  134 (275)
                      .++|+.+.++|.-|..   .+.+.|-+....-       ..|+.+.+        .+..|-+ --+.+..+ ++|+  ..
T Consensus        99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~~~~~~sglg~~-t~~p~~~~~~~~~~~~~  170 (511)
T PLN02192         99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLT-------GSFTEENLEFQRKILERSGLGES-TYLPEAVLNVPPNPCMA  170 (511)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHhcCCCCc-ccCChhhccCCCCccHH
Confidence            4579999999999986   4677777666533       11221111        1111100 00111111 2111  11


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      ........++..|+.+||+++|++|++        ++++|-++..                         ......++..
T Consensus       171 ~~~~Ea~~~~~~Aa~~aL~kaGi~p~D--------IDiLIv~~S~-------------------------~~~~PSlaa~  217 (511)
T PLN02192        171 EARKEAETVMFGAIDQLLAKTSVKPKD--------IGILIVNCSL-------------------------FNPTPSLSAM  217 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECCC-------------------------CCCCchHHHH
Confidence            122335678889999999999998654        3444433321                         1122456888


Q ss_pred             HHHHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          215 LAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       215 ia~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |...+|++.  .++.++ .+|++++.||..|.+.|+.|....|||.++|.
T Consensus       218 I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~  267 (511)
T PLN02192        218 VINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMEN  267 (511)
T ss_pred             HHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEe
Confidence            999999984  789999 69999999999999999999999999999998

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=98.13  E-value=3.5e-06  Score=72.53  Aligned_cols=87  Identities=29%  Similarity=0.466  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC
Q 023909          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (275)
Q Consensus       143 l~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~  222 (275)
                      ++-++...||+|+|+.   ++++...-+|-++|.+.-                                ..|.-|.+|++
T Consensus        32 ~a~ea~tkal~da~ik---ys~vqqa~vgyvfgdstc--------------------------------gqraiyevgmt   76 (408)
T KOG1406|consen   32 FAKEAITKALQDAGIK---YSEVQQAVVGYVFGDSTC--------------------------------GQRAIYEVGMT   76 (408)
T ss_pred             HHHHHHHHHHHhcCCC---HHHHHhhhheeeecCCcc--------------------------------chHHHHhcccc
Confidence            4567889999999998   555666777888876432                                22455678888


Q ss_pred             C-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCCh
Q 023909          223 G-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP  265 (275)
Q Consensus       223 G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p  265 (275)
                      | |-+.|++.|++|..||.+|.+.|++|..|.+|+-|.|- +.+
T Consensus        77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfek-m~~  119 (408)
T KOG1406|consen   77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEK-MER  119 (408)
T ss_pred             CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhh-hCC
Confidence            8 89999999999999999999999999999999999987 444

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=98.13  E-value=9.5e-06  Score=75.19  Aligned_cols=86  Identities=16%  Similarity=0.180  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHcC-CCC-cccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          141 LIYALVAGKKALVDAG-ITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG-~~~-~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ..|+.+++++||+||| +++ ++++       ++++++. ....                      +.  ......++..
T Consensus        26 ~eL~~eA~~~Al~DAG~l~~~~dId-------~~~~~~~-~~~~----------------------~~--~~~~~~~~~~   73 (385)
T PRK06066         26 REMMFEAASRAYKDAGNINPRRDVD-------SFISCQE-DFWE----------------------GI--AIADEFAPDQ   73 (385)
T ss_pred             HHHHHHHHHHHHHhcCCCCChhcCC-------EEEEecC-cccC----------------------cc--cccchhHHHH
Confidence            4589999999999999 975 3332       4666531 1000                      00  0111235567


Q ss_pred             hCCC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          219 LGWT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       219 ~~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +++. .|.+.|   |+|+..+++.|+.+|++|.||.+||.|++-
T Consensus        74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~  114 (385)
T PRK06066         74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSK  114 (385)
T ss_pred             cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence            7774 467666   899999999999999999999999999885

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=98.11  E-value=1.4e-05  Score=74.09  Aligned_cols=87  Identities=23%  Similarity=0.203  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+++|+.+||+++  ++++++       .|++|+..+.+                         ..-..+..|...||
T Consensus        50 ~~la~~Aa~~aL~~a--~~~~Id-------~li~~t~s~~~-------------------------~~~s~a~~v~~~Lg   95 (379)
T TIGR01835        50 VTMAASAAKPILDRN--DKQKID-------MVIFGTESGID-------------------------QSKAAAVYVHGLLG   95 (379)
T ss_pred             HHHHHHHHHHHHHhC--CHhhCC-------EEEEEeCCCCC-------------------------CCCCHHHHHHHHhC
Confidence            579999999999998  433221       36677754321                         11236788999999


Q ss_pred             CCC--cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WTG--PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~G--p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +.+  +++-+..+|++++.||+.|.++|++|..+.|||.++|.
T Consensus        96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~  138 (379)
T TIGR01835        96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI  138 (379)
T ss_pred             CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence            975  78889999999999999999999999999999999987

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PLN02377 3-ketoacyl-CoA synthase

Probab=98.00  E-value=2.5e-05  Score=74.38  Aligned_cols=152  Identities=11%  Similarity=0.119  Sum_probs=100.0

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CcceeeecCCCCCCCC-CCH--HHH
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISP--KIA  134 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~--~~~  134 (275)
                      .++|+.+-++|.-|.-   .+.+.|-+....-.       .|+.+.+        .+..|.+. -+++... +++  ...
T Consensus        95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~ri~~~sgig~~t-~~p~~~~~~~~~~~~~  166 (502)
T PLN02377         95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTG-------DFDDSSLEFQRKILERSGLGEDT-YVPEAMHYIPPRPSMA  166 (502)
T ss_pred             CCCEEEEeeeeecCCccccccHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhcCCCCcc-ccCchhccCCccchHH
Confidence            4579999999999885   46677776665331       1221111        11111100 0111111 222  222


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      ........++..|+.+||+++|++|++        +.++|-+..+.                         .....++..
T Consensus       167 ~~~~ea~~l~~~A~~~aL~kaGi~p~d--------ID~LVv~cS~~-------------------------~~~PSlaa~  213 (502)
T PLN02377        167 AAREEAEQVMFGALDNLFANTNVNPKD--------IGILVVNCSLF-------------------------NPTPSLSAM  213 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECCCC-------------------------CCCCcHHHH
Confidence            233446779999999999999998654        33444343221                         112356888


Q ss_pred             HHHHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          215 LAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       215 ia~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |...||++.  .++.++ .+|++++.+|..|.++|+.|....|||.++|.
T Consensus       214 V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~  263 (502)
T PLN02377        214 IVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTEN  263 (502)
T ss_pred             HHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEec
Confidence            999999985  688899 59999999999999999999999999999998

>PLN02854 3-ketoacyl-CoA synthase

Probab=97.96  E-value=4.2e-05  Score=73.01  Aligned_cols=153  Identities=14%  Similarity=0.141  Sum_probs=99.4

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CcceeeecCCCCCCCC-CCH--HHH
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISP--KIA  134 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~--~~~  134 (275)
                      .++|+.+.+.|.-|.-   .+.+.|-+....-.       .|+.+.+        .+..|-+- -+.+... ++|  ...
T Consensus       111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~~~~~~sg~g~~t-y~P~~~~~~~~~~~~~  182 (521)
T PLN02854        111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENG-------SFEDETVQFQRRISTRSGLGDET-YLPRGITSRPPNLCME  182 (521)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHcC-------CCCHHHHHHHHHHHHhcCCCCcc-ccCccccCCCCcchHH
Confidence            4579999999999885   46777777665431       1221111        11111000 0111111 222  122


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      .........+..++.++|+++|+++++        ++++|-++.+.                         .....++..
T Consensus       183 ~~r~ea~~v~~~~~~~lL~kaGi~p~d--------ID~LIv~cS~~-------------------------~p~PSlAa~  229 (521)
T PLN02854        183 EARAEAEAVMFGALDSLFSKTGVKPRD--------IGILIVNCSLF-------------------------NPTPSLSAM  229 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECCCC-------------------------CCCCCHHHH
Confidence            223345567778999999999998654        44455333211                         112356888


Q ss_pred             HHHHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          215 LAMDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       215 ia~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |...+|++.  .++-++ .+|++++.+|..|.++|+.|....|||.++|.+
T Consensus       230 I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~  280 (521)
T PLN02854        230 IVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENI  280 (521)
T ss_pred             HHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeee
Confidence            999999974  477788 799999999999999999999999999999983

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=97.95  E-value=4.5e-05  Score=71.99  Aligned_cols=139  Identities=15%  Similarity=0.153  Sum_probs=89.7

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +.|-|.|+|..+|.- .+.+++-+.+  |.+     +.|-..++..+.-.    +     ..+.     ....-|++.|+
T Consensus         3 ~~vgI~gig~Y~P~~~v~n~eLa~~~--g~~-----~~~~~~GI~~r~~a----v-----a~~~-----Ed~~tmA~~AA   61 (459)
T PLN02577          3 KNVGILAMEVYFPPTCVQQEALEAHD--GVS-----KGKYTIGLGQDCMA----F-----CTDV-----EDVISMSLTVV   61 (459)
T ss_pred             CccEEEEEEEeCCCeEEcHHHHHHHh--CCC-----HHHHhhccceeEec----c-----CCCC-----CCHHHHHHHHH
Confidence            368899999999986 6777765543  211     00100111111100    0     0011     12357999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH---HHhCCCC-c
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA---MDLGWTG-P  224 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~~~l~G-p  224 (275)
                      .++|+++|+++++++       -|++|+..+...                         ....+..|.   ..+|.+. .
T Consensus        62 ~~aL~~agid~~~Id-------llivaTeT~~d~-------------------------~ps~A~~v~~ll~~LG~~~~~  109 (459)
T PLN02577         62 KSLLEKYNIDPKQIG-------RLEVGSETVIDK-------------------------SKSIKTFLMQLFEESGNTDIE  109 (459)
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEcCCCCCC-------------------------CCchHHHHHHHHHHhCCCCcE
Confidence            999999999865543       367777643211                         122344454   3445533 6


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCC--CEEEEeccCC
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDT--DIMLCGGSDG  261 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~--d~alvGgvd~  261 (275)
                      ++-+..||++++.||..|..+|++|..  +.|||.|+|.
T Consensus       110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~  148 (459)
T PLN02577        110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS  148 (459)
T ss_pred             EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech
Confidence            788999999999999999999999985  9999999997

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=97.88  E-value=5.1e-05  Score=71.57  Aligned_cols=91  Identities=16%  Similarity=0.114  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..-|++.|+..+|+++|+++++++       -|++|+..+.+.                         ....+..|...|
T Consensus        50 ~~tma~~AA~~lL~~a~id~~~Id-------~Liv~TeS~~d~-------------------------sps~a~~v~~lL   97 (454)
T TIGR01833        50 INSLCLTVVSKLMERYNIDYNQIG-------RLEVGTETIIDK-------------------------SKSVKTVLMQLF   97 (454)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCCC-------------------------CCchHHHHHHHH
Confidence            366999999999999998865432       367777643321                         122455666655


Q ss_pred             CCCC----cccccchhhhHHHHHHHHHHHHHHcCCC--CEEEEeccCCC
Q 023909          220 GWTG----PSYSISTACASSNYSILNATSHIIKGDT--DIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~G----p~~~v~taCsS~l~Al~~A~~~I~~G~~--d~alvGgvd~~  262 (275)
                      ++-|    .++-+..||++++.||..|..+|++|..  +.|||.|+|..
T Consensus        98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia  146 (454)
T TIGR01833        98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA  146 (454)
T ss_pred             HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccc
Confidence            4322    5777899999999999999999999974  99999999984

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=97.81  E-value=9.8e-05  Score=65.15  Aligned_cols=159  Identities=14%  Similarity=0.144  Sum_probs=102.1

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CcceeeecCCCCCCCC-CCHH--HH
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISPK--IA  134 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~~--~~  134 (275)
                      .++|+++.+.|.-|.-   .+.+.|++.......       |+.+.+        .+.+|-. --+.+..+ ++++  ..
T Consensus         6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-------f~~~sl~F~~kIlerSGlG~e-Ty~P~~~~~~p~~~s~~   77 (290)
T PF08392_consen    6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-------FDEESLDFQRKILERSGLGDE-TYLPPALHEIPPDPSLA   77 (290)
T ss_pred             CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-------CChhHHHHHHHHHHhcCCCcc-ccCCcccccCCCcccHH
Confidence            4589999999999986   578888887765421       221111        0111100 00111111 2222  11


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      +..+....++..++.++|+.+|+.|.+        |+++|-+...                         ......++..
T Consensus        78 ~a~~Eae~v~f~av~~LL~ktgv~p~d--------IdiLVvncs~-------------------------f~ptPSLsam  124 (290)
T PF08392_consen   78 AAREEAEMVIFGAVDDLLAKTGVKPSD--------IDILVVNCSL-------------------------FNPTPSLSAM  124 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECcC-------------------------CCcCCcHHHH
Confidence            222445667888999999999998644        4455433321                         1223357888


Q ss_pred             HHHHhCCCCcccccc---hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHH
Q 023909          215 LAMDLGWTGPSYSIS---TACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTV  269 (275)
Q Consensus       215 ia~~~~l~Gp~~~v~---taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~  269 (275)
                      |...||++.-..+++   -||++|+.+|.+|.++|+.-.-..|||..+|. +++..+.
T Consensus       125 Ivnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~-~s~~~Y~  181 (290)
T PF08392_consen  125 IVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTEN-ISANWYR  181 (290)
T ss_pred             HHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEee-ccccccc
Confidence            999999988655433   48999999999999999999999999999999 5654443

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PRK07937 lipid-transfer protein; Provisional

Probab=97.67  E-value=0.00014  Score=66.65  Aligned_cols=86  Identities=14%  Similarity=0.127  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+|||+++++++       +++.+..  +.                     +.+....  ...+...+|
T Consensus        25 ~el~~eA~~~Al~DAgl~~~dID-------~~~~~~~--~~---------------------~~~~~~~--~~~~~~~~G   72 (352)
T PRK07937         25 VEMLMPCFAELYAELGITKSDIG-------FWCSGSS--DY---------------------LAGRAFS--FISAIDSIG   72 (352)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcc--cc---------------------ccccccc--hhhHHhhcc
Confidence            45899999999999999976533       4433321  10                     0000000  012334456


Q ss_pred             CC-C-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WT-G-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~-G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +. + |...+.   ++|..||+.|+.+|++|.||.+||.|++-
T Consensus        73 ~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k  112 (352)
T PRK07937         73 AVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGK  112 (352)
T ss_pred             CCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence            52 2 233343   47888999999999999999999999885

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=97.34  E-value=0.00066  Score=59.97  Aligned_cols=89  Identities=17%  Similarity=0.324  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH-HhCC
Q 023909          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM-DLGW  221 (275)
Q Consensus       143 l~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~~~l  221 (275)
                      |+..+....+|+-+++|..+.+       |++|+-....                          ......|++. +-|+
T Consensus        64 Ll~~vl~a~ie~t~~dp~~igd-------i~vG~vL~pg--------------------------~ga~e~R~a~~~ag~  110 (435)
T KOG1389|consen   64 LLAAVLRAVIEKTNLDPSLIGD-------IVVGTVLAPG--------------------------SGASECRMAAFYAGF  110 (435)
T ss_pred             HHHHHHHHHHhhcCCCHHHhcc-------eeeeeccCCC--------------------------cchHHHHHHHHHcCC
Confidence            4556667778999988765432       6777643211                          1133445544 3355


Q ss_pred             --CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          222 --TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       222 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                        .-|-.+|+.-|+|||+|+..-...|+.|.+|+-|.+|+|.+.+
T Consensus       111 P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~  155 (435)
T KOG1389|consen  111 PETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTT  155 (435)
T ss_pred             CcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcc
Confidence              5588999999999999999999999999999999999998654

>PLN00415 3-ketoacyl-CoA synthase

Probab=97.31  E-value=0.00095  Score=62.92  Aligned_cols=152  Identities=11%  Similarity=0.096  Sum_probs=91.9

Q ss_pred             CCcEEEEeccccCCCC---CCHHHHHHHHHcCCCceeeCCCCCCCCC--------CcceeeecCCCCCCCC-CCHHH-Hh
Q 023909           69 ERRIVVTGLGAVTPLG---DDAHLFHTSLLEGVTGISDIQGFDCSEF--------PTRIAAEIKSLSTGGW-ISPKI-AK  135 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~~~~~~~~--------~~~~~g~i~~fd~~~~-i~~~~-~~  135 (275)
                      .++|+.+-+.|.-|..   .+.+.|-+....-       ..|+.+.+        .+..+-+.- ++.... .+|.. .+
T Consensus        57 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~s~~F~~~i~~rSGlg~et~-~p~~~~~~~~~~~~~  128 (466)
T PLN00415         57 SKPVYLVDFSCHQPTDSCKISSETFFNMAKGA-------QLYTEETIQFMTRILNRSGLGDDTY-SPRCMLTSPPTPSMY  128 (466)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHcCCCCCee-eCCccccCCCCCChh
Confidence            4589999999999875   4677777766533       11221111        001100000 110000 11100 00


Q ss_pred             hCCHHHHHHH-HHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          136 KADKYLIYAL-VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       136 ~~d~~~rl~l-~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      .-+....+.+ .|+.+||+++|+++++        +.++|-++.+.                         .....++.+
T Consensus       129 ~~~~e~em~i~~A~~~aL~~aGi~p~d--------ID~LIvs~T~~-------------------------~~~Pslaa~  175 (466)
T PLN00415        129 EARHESELVIFGALNSLFKKTGIEPRE--------VGIFIVNCSLF-------------------------NPNPSLSSM  175 (466)
T ss_pred             hhHHHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEECcCC-------------------------CCCchHHHH
Confidence            1122334444 4777889999998654        33444232211                         112345778


Q ss_pred             HHHHhCCC--Ccccccch-hhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          215 LAMDLGWT--GPSYSIST-ACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       215 ia~~~~l~--Gp~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +...+|++  -..+-++. +|++++.+|..|.+.++.+....|||.++|.
T Consensus       176 l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~  225 (466)
T PLN00415        176 IVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTEN  225 (466)
T ss_pred             HHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            88899997  24677887 9999999999999999999999999999998

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=97.22  E-value=0.00048  Score=59.36  Aligned_cols=91  Identities=27%  Similarity=0.475  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|...++..||+.|++.++.++       -|++|.-....                .+.        -+++.++....|
T Consensus        29 TdL~~~AakAAL~aa~v~~e~VD-------~VI~GNV~aSS----------------sDg--------IYl~RHvGL~~G   77 (396)
T KOG1391|consen   29 TDLGVVAAKAALKAANVGAEAVD-------HVIMGNVLASS----------------SDG--------IYLARHVGLRVG   77 (396)
T ss_pred             hhHHHHHHHHHHhhcCCChhhcc-------eEEEeeeeecc----------------CCc--------eEeeeccccccC
Confidence            45777889999999999876533       35665421100                000        012223333333


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  .-|.++|+.=|.||.++|-.+++.|.-|+.+++|+||+|.+
T Consensus        78 vP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnM  121 (396)
T KOG1391|consen   78 VPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENM  121 (396)
T ss_pred             CcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCcccc
Confidence            2  45899999999999999999999999999999999999983

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=97.17  E-value=0.0019  Score=59.02  Aligned_cols=90  Identities=24%  Similarity=0.290  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeE-EEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRC-GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~-gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ..-|+++|++++|+.+++++        .++ .|++|+..+.+.                         .-..+..|+..
T Consensus        51 ~vTmaveAA~~~l~r~~~D~--------~~Ig~v~vgTES~~d~-------------------------~K~~at~v~~~   97 (377)
T COG3425          51 AVTMAVEAARNALKRADIDP--------SKIGAVIVGSESGPDA-------------------------VKPTATIVAEA   97 (377)
T ss_pred             HHHHHHHHHHHHHhccCCCH--------HHCceEEEecCCCccc-------------------------ccchHHHHHHH
Confidence            36699999999999998875        344 588888654332                         11346678899


Q ss_pred             hCCCCccccc--chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTGPSYSI--STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~Gp~~~v--~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ||+.--..+.  -.||-+|+.||+.|..+|.+|..+-+||.|+|..
T Consensus        98 lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a  143 (377)
T COG3425          98 LGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTA  143 (377)
T ss_pred             hCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhh
Confidence            9987655554  4699999999999999999999999999999973

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=96.87  E-value=0.0014  Score=46.79  Aligned_cols=36  Identities=31%  Similarity=0.422  Sum_probs=31.8

Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      -|+.+|++.+.||++|..+|+.|.++.+||.+.|..
T Consensus         2 Di~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~   37 (80)
T PF08545_consen    2 DINQACAGFLYALDVAAALIASGRAKNALVVGGDRL   37 (80)
T ss_dssp             EEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEG
T ss_pred             cccccchHHHHHHHHHHHHHhhccCCEEEEEeeccc
Confidence            468899999999999999999999999999999983

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=96.79  E-value=0.011  Score=50.72  Aligned_cols=98  Identities=19%  Similarity=0.093  Sum_probs=67.9

Q ss_pred             HHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHH
Q 023909          132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMA  211 (275)
Q Consensus       132 ~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (275)
                      +...+..-...|+.+++.+||+++|+++++++       -|++-++.|                          .....+
T Consensus        92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIt-------hlv~vs~TG--------------------------~~~Pgl  138 (226)
T PF00195_consen   92 RNALYAEEAPPLAEEAARKALAEAGLDPSDIT-------HLVTVSCTG--------------------------IAAPGL  138 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGEC-------EEEEEESSS--------------------------SECS-H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccc-------eEEEEecCC--------------------------cCCCch
Confidence            33334455678999999999999999864432       345444432                          222334


Q ss_pred             HHHHHHHhCCCCcc---cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          212 SAVLAMDLGWTGPS---YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       212 a~~ia~~~~l~Gp~---~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      -.++...|||+.-.   ....-||..|..+|..|.+..++..-..|||..+|++
T Consensus       139 D~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElc  192 (226)
T PF00195_consen  139 DARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELC  192 (226)
T ss_dssp             HHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEG
T ss_pred             hHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEee
Confidence            55788888987643   4455799999999999999999999999999999984

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=96.74  E-value=0.0039  Score=51.11  Aligned_cols=139  Identities=19%  Similarity=0.198  Sum_probs=85.0

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ++|-|.+|+..+|.- .+.+++-+.  .|.+.    .+|.. ++......+.+         +.|     ...-|++.++
T Consensus         3 ~~VGI~~i~~y~p~~~v~~~~La~~--~g~d~----~K~~~-glgq~~~av~~---------~~E-----D~vTmA~nAa   61 (174)
T PF01154_consen    3 QNVGIDAIEFYIPRYYVDQEELAEA--RGVDP----GKYTI-GLGQEKMAVPP---------PDE-----DIVTMAANAA   61 (174)
T ss_dssp             SSEEEEEEEEE-ESEEEEHHHHHHH--TTS-T----CHHHT-TT--SEEEE-----------TTS------HHHHHHHHH
T ss_pred             ccccEeEEEEecCceEecHHHHHHH--hCCCH----HHhhh-hcCeeEEEeCC---------Ccc-----cHHHHHHHHH
Confidence            578999999999985 677775443  23211    01110 11111111111         111     2366899999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCCcc--
Q 023909          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS--  225 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~g-v~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~--  225 (275)
                      ..+|++.+++++        ++| ++|||..+-.                         ..-.++..+..+|++.|.+  
T Consensus        62 ~~ll~~~~id~~--------~Ig~l~vgTES~vD-------------------------~sKs~~t~v~~ll~~s~~~~~  108 (174)
T PF01154_consen   62 KPLLDRYNIDPD--------DIGRLIVGTESGVD-------------------------KSKSISTYVHQLLGLSGNPDC  108 (174)
T ss_dssp             HTTHHHHT-HHH--------HEEEEEEE-SS-SB-------------------------SSS-HHHHHHHHTTTTT-SSS
T ss_pred             HHHHHHcCCCHH--------HccEEEEecccccc-------------------------ccccHHHHHHHHhCcCCCCce
Confidence            999999887643        344 5677653211                         0113677888999996543  


Q ss_pred             --cccchhhhHHHHHHHHHHHHHHcCCCC--EEEEeccCCC
Q 023909          226 --YSISTACASSNYSILNATSHIIKGDTD--IMLCGGSDGM  262 (275)
Q Consensus       226 --~~v~taCsS~l~Al~~A~~~I~~G~~d--~alvGgvd~~  262 (275)
                        +-+-.||-+|..||..|+.+|+++..|  .+||.++|..
T Consensus       109 ~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA  149 (174)
T PF01154_consen  109 RGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIA  149 (174)
T ss_dssp             EEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred             eeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence              334579999999999999999999765  8999998874

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=95.88  E-value=0.0035  Score=54.93  Aligned_cols=53  Identities=26%  Similarity=0.486  Sum_probs=45.9

Q ss_pred             HHHHHHHHHhCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          210 MASAVLAMDLGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       210 ~~a~~ia~~~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .++...+..-|+  +-|..+|.-||-|+.+|+..+.-+|..|.||+.++||||.+
T Consensus       104 niareaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelm  158 (465)
T KOG1392|consen  104 NIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELM  158 (465)
T ss_pred             hHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeec
Confidence            345555555566  66999999999999999999999999999999999999984

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=94.59  E-value=0.18  Score=44.88  Aligned_cols=86  Identities=22%  Similarity=0.194  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..+|..+++..||+.||+.+++        +-+++|-..-                         +  ..+.++..+..|
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~d--------Id~~~aGDLl-------------------------n--Q~i~s~f~ar~l   95 (329)
T PF07451_consen   51 ESKMQKEAVELALKKAGLKKED--------IDYLFAGDLL-------------------------N--QIISSSFAARDL   95 (329)
T ss_dssp             HHHHHHHHHHHHHHHTT--GGG---------SEEEEEETT-------------------------C--CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHH--------CeEEEehhhh-------------------------h--hhHHHHHHHHhc
Confidence            3678899999999999998544        4467764310                         1  123455566666


Q ss_pred             CCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++  |=+=+-.|||+...+|.+|.-+|..|-+|.+|++.+.-.
T Consensus        96 ~i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~  136 (329)
T PF07451_consen   96 GI--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHF  136 (329)
T ss_dssp             T----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-C
T ss_pred             CC--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEecccc
Confidence            54  667788999999999999999999999999999887653

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=94.59  E-value=0.15  Score=45.39  Aligned_cols=93  Identities=14%  Similarity=0.102  Sum_probs=66.8

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH
Q 023909          137 ADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA  216 (275)
Q Consensus       137 ~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  216 (275)
                      +....-+..++.++||+++++.+++++       .|++.++.|                          .....+=.+|.
T Consensus        73 ie~a~~l~v~a~r~aL~~~~l~pedId-------~vv~vtsTG--------------------------~~~Ps~dari~  119 (356)
T COG3424          73 IEEAVPLGVDALRRALDGSPLRPEDID-------AVVTVTSTG--------------------------LATPSLDARIV  119 (356)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCHHHCc-------EEEEEeecc--------------------------ccCCChhHHHH
Confidence            344567899999999999999876533       244444432                          12223345677


Q ss_pred             HHhCCCCccc--c-cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          217 MDLGWTGPSY--S-ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       217 ~~~~l~Gp~~--~-v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ..|||.-..-  . -.-+|+.|..++..|.+..|..--..|+|..+|+|
T Consensus       120 ~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELC  168 (356)
T COG3424         120 GELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELC  168 (356)
T ss_pred             hhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeee
Confidence            7777754321  2 23599999999999999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	275
1j3n_A	408	Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei		1e-35
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		8e-31
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		9e-28
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		1e-27
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		1e-27
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		6e-27
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		2e-25
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		2e-24
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		2e-24
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		3e-24
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		3e-23
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		4e-23
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		5e-23
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		9e-22
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-18
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		1e-18
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		1e-18
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		3e-18
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		4e-18
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		4e-18
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		4e-18
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		4e-18
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		4e-18
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-17
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		2e-17
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		1e-16
1tqy_A	424	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		1e-15
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		2e-15
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		6e-14
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		6e-14
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		2e-13
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		3e-11
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		9e-10
1tqy_B	415	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		2e-09
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		1e-08
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		2e-08
2gp6_A	434	X-Ray Crystal Structure Of Mycobacterium Tuberculos		1e-06
3hhd_A	965	Structure Of The Human Fatty Acid Synthase Ks-Mat D		5e-04
2qo3_A	915	Crystal Structure Of [ks3][at3] Didomain From Modul		5e-04
2uv9_A	1878	Crystal Structure Of Fatty Acid Synthase From Therm		5e-04

>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408

Iteration: 1
 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 123/201 (61%), Gaps = 13/201 (6%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+  +  G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYL 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+      +E
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMET----WE 113
Query: 190 A-----IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
           A     ++    ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A  
Sbjct: 114 AQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALR 173
Query: 245 HIIKGDTDIMLCGGSDGMIIP 265
            I  G+ D++L GG++  I P
Sbjct: 174 MIQLGEADLVLAGGTEAAITP 194

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           +++R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      
Sbjct: 5   EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQ 64
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           ++  K AK+ D++  +A+ A ++A+ DA +   V  EL+    GV+IG+ +GGL+VL D 
Sbjct: 65  FLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQ 121
Query: 188 FE-AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
               +     + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLV 181
Query: 247 IKGDTDIMLCGGSDGMIIP 265
             G    M+CGG++  I P
Sbjct: 182 QNGYAKAMICGGTEAAITP 200

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      
Sbjct: 21  KLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDK 80
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           +   K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D 
Sbjct: 81  YFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEA---LNRDRFGVIVASGIGGIKEIED- 136
Query: 188 FEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
            + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A  
Sbjct: 137 -QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 195
Query: 245 HIIKGDTDIMLCGGSDGMIIP 265
            I  G  D+ML GG++  I P
Sbjct: 196 SIKFGFQDVMLVGGTEASITP 216

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      
Sbjct: 22  KLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDK 81
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
           +   K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D 
Sbjct: 82  YFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEA---LNRDRFGVIVASGIGGIKEIED- 137
Query: 188 FEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATS 244
            + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A  
Sbjct: 138 -QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 196
Query: 245 HIIKGDTDIMLCGGSDGMIIP 265
            I  G  D+ML GG++  I P
Sbjct: 197 SIKFGFQDVMLVGGTEASITP 217

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 26  QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 85
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 86  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 142
Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 202
Query: 247 IKGDTDIMLCGGSDGMI 263
            +GD D M+ GG++  I
Sbjct: 203 QRGDADAMITGGTEAPI 219

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 8/209 (3%)
Query: 60  IITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAE 119
           ++ +    K  R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAE
Sbjct: 13  LVPRGSHMKLNRVVVTGYGVTSPIGNTPAEFWNSLATGKIGIGGITKFDHSDFDVHNAAE 72
Query: 120 IKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG 179
           I+      +   K   + D Y +YAL A ++A+  A +       L++ R GVI+ S +G
Sbjct: 73  IQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLD---VAALNRDRFGVIVASGIG 129
Query: 180 GLRVLNDGFEAIKVSY---KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSN 236
           G++ + D  + +++     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN
Sbjct: 130 GIKEIED--QVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSN 187
Query: 237 YSILNATSHIIKGDTDIMLCGGSDGMIIP 265
            +I +A   I  G  D+ML GG++  I P
Sbjct: 188 DAIGDAFRSIKFGFQDVMLVGGTEASITP 216

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 8/212 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTG+GAVTP+G+DA     +  +GV G++     +  +FP +IAAE+K      +
Sbjct: 3   KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKXTRLNPDDFPVKIAAELKDFDVEKY 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           +  K A+K D++  YA+ + + A+ D+G+   V  + + +R GV IGS +GG       +
Sbjct: 63  LEKKEARKXDRFTHYAIASAEXAVQDSGL---VIDDSNANRVGVWIGSGIGGXETFETQY 119
Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           E  +   ++++SPF++P  + +  S  +++  G  G + +  TACA++  SI +A   I 
Sbjct: 120 EIFLNRGHRRVSPFFVPXXIPDXGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179
Query: 248 KGDTDIMLCGGSDGMI----IPSGTVNKAVAF 275
           +GD D  + GG++  I    +   T NKA++ 
Sbjct: 180 RGDADAXITGGAEAPITKXSLAGFTANKALSL 211

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 191
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD D+M+ GG++    P G
Sbjct: 192 IAYGDADVMVAGGAEKASTPLG 213

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 191
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD D+M+ GG++    P G
Sbjct: 192 IAYGDADVMVAGGAEKASTPLG 213

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 2   KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 61
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 62  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 116
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TAC S  ++I +A   
Sbjct: 117 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 176
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD D+M+ GG++    P G
Sbjct: 177 IAYGDADVMVAGGAEKASTPLG 198

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 8/202 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARI 191
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD D+M+ GG++    P G
Sbjct: 192 IAYGDADVMVAGGAEKASTPLG 213

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG- 127
            RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA +   S  G 
Sbjct: 20  HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 79
Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                ++S    K      I A+ A + A+ D+G   Q   E D+   GV IG  M  L 
Sbjct: 80  FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 137
Query: 183 VLNDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
           V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STAC +  +++ +
Sbjct: 138 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGD 197
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
           +   I  GD D+M+ GG+D  I P
Sbjct: 198 SFRFIAHGDADVMVAGGTDSCISP 221

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 8/202 (3%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    
Sbjct: 17  KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
           IS K  +K D ++ Y +VAG +A+ D+G  ITE+     + +R G  IGS +GGL ++ +
Sbjct: 77  ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 131
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
              ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARI 191
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
           I  GD D+M+ GG++    P G
Sbjct: 192 IAYGDADVMVAGGAEKASTPLG 213

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG- 127
            RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA +   S  G 
Sbjct: 26  HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQ 85
Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                ++S    K      I A+ A + A+ D+G   Q   E D+   GV IG  M  L 
Sbjct: 86  FNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLE 143
Query: 183 VLNDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
           V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STA  +  +++ +
Sbjct: 144 VVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTAXTTGAHAVGD 203
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
           +   I  GD D+M+ GG+D  I P
Sbjct: 204 SFRFIAHGDADVMVAGGTDSCISP 227

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------S 122
           RR+V+TGLG V+PL          LL G +G   +  F+  +   +IA  I        +
Sbjct: 10  RRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGT 69
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
            +    + PK  +K D +++YA+ A  +AL DAG   +   + D+ R GV+IGS +GG+ 
Sbjct: 70  FNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPE--NDEDQVRTGVLIGSGIGGIE 127
Query: 183 VLND-GFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            + + G+       +++SPF+IP  L N+AS  +++     GP++S+ TACA+  ++I +
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD 187
Query: 242 ATSHIIKGDTDIMLCGGSD 260
           A   I  GD D+M+ GG++
Sbjct: 188 AARLIAFGDADVMVAGGTE 206

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 191 LGKQDIVFAGGGE 203

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 179 LGKQDIVFAGGGE 191

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-----GFDCSEFPTRIAAEIKSLS 124
           RR+VVTG+G V+ +G +      SL E  +GIS  +     GF C +       +I+SL 
Sbjct: 23  RRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRC-QVHGAPDIDIESL- 80
Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               +  +  +   +   +  +A  +A+ DAG+TE+   E+   R G+I+GS     R +
Sbjct: 81  ----VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTI 133
Query: 185 NDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            D  +  +    K++ PF +P ++++ ASA LA      G +YSIS+ACA+SN+ I NA 
Sbjct: 134 VDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAY 193
Query: 244 SHIIKGDTDIMLCGGSDGM 262
             I  G  D M  GG + +
Sbjct: 194 EMIQYGKQDRMFAGGCEDL 212

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 191 LGKQDIVFAGGGE 203

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 190
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 191 LGKQDIVFAGGGE 203

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 179 LGKQDIVFAGGGE 191

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 179 LGKQDIVFAGGGE 191

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-----GFDCSEFPTRIAAEIKSLS 124
           RR+VVTG+G V+ +G +      SL E  +GIS  +     GF C +       +I+SL 
Sbjct: 6   RRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRC-QVHGAPDIDIESL- 63
Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               +  +  +   +   +  +A  +A+ DAG+TE+   E+   R G+I+GS     R +
Sbjct: 64  ----VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTI 116
Query: 185 NDGFEAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
            D  +  +    K++ PF +P ++++ ASA LA      G +YSIS+ACA+SN+ I NA 
Sbjct: 117 VDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAY 176
Query: 244 SHIIKGDTDIMLCGGSDGM 262
             I  G  D M  GG + +
Sbjct: 177 EMIQYGKQDRMFAGGCEDL 195

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------S 122
           RR+V+TGLG V+PL  D       LLEG +G+  I  FD S+   +IAA I        +
Sbjct: 6   RRVVITGLGLVSPLAGDVEYSWKRLLEGKSGVRRITEFDVSDLSCQIAARIPVGDGTNGT 65
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
            +    +  K  +K D +++YA+ A  +AL DA    + S E       +I     G   
Sbjct: 66  YNADLHMESKEQRKVDAFIVYAIAAADQALADAEWFPK-SDEDQICTGVLIGSGIGGIEG 124
Query: 183 VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
           ++  G+       +++SPF+IP  L N+AS  +++  G  GP++S+ TAC++  ++I +A
Sbjct: 125 IVEAGYTLRDKGPRRISPFFIPGRLINLASGYVSIKYGLRGPNHSVVTACSTGAHAIGDA 184
Query: 243 TSHIIKGDTDIMLCGGSDGMI 263
              I  GD D+ML GG++  I
Sbjct: 185 ARLIALGDADVMLAGGTESPI 205

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 26/215 (12%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGIS-------DIQGFD-------CSEFPTR 115
           RR+VVTGLG VTPLG         L++G  GI         ++ FD         +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 116 IAAEIKSLSTGG------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSR 169
           +AA +   S  G      W++   +K    ++ YA+ A  +AL DA      + E +K R
Sbjct: 61  VAAFVPYGSNPGEFDEALWLN---SKAVANFIGYAVCAADEALRDAEWLP--TEEEEKER 115
Query: 170 CGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSI 228
            GV IG  +G +  + +  + I +   +++SPF+IP  L NMAS  ++M  G+ GP+++ 
Sbjct: 116 TGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAA 175
Query: 229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
            TACA+  +SI +AT  I  GD D+M+ GG++  I
Sbjct: 176 VTACATGAHSIGDATRMIQFGDADVMVAGGTESSI 210

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 17/202 (8%)
Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---GG 127
           R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++    GG
Sbjct: 25  RVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGG 84
Query: 128 W-----ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           +     +  K  +K D+++  A+VA  +AL +AG   +   E  + R   ++ S +GG  
Sbjct: 85  FDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEA--EQQRERTATVVASGIGGFP 142
Query: 183 VLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
            L    EA+++      +++SPF IP+ L+N+A+  +++   + GP     TACA+S  +
Sbjct: 143 GLA---EAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQA 199
Query: 239 ILNATSHIIKGDTDIMLCGGSD 260
           I +A   I  G+ D++L GG++
Sbjct: 200 IGDAMRMIRTGEADVVLAGGAE 221

>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE         
Sbjct: 2   KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 61
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR------ 182
             P+   + D+   +A+   ++A   +G+       LD +R GV +GSA+          
Sbjct: 62  FGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLGSAVAAATSLEREY 118
Query: 183 -VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            +L+D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ N
Sbjct: 119 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 178
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
           A   I +G  D+M  G +D  I P
Sbjct: 179 AVRAIEEGSADVMFAGAADTPITP 202

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 71  RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST---GG 127
           R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++    GG
Sbjct: 25  RVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGG 84
Query: 128 W-----ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
           +     +  K  +K D+++  A+VA  +AL +AG   +   E  + R   ++ S +GG  
Sbjct: 85  FDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEA--EQQRERTATVVASGIGGFP 142
Query: 183 VLNDGFEAIKVS----YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
            L    EA+++      +++SPF IP+ L+N+A+  +++   + GP     TA A+S  +
Sbjct: 143 GLA---EAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTAXAASVQA 199
Query: 239 ILNATSHIIKGDTDIMLCGGSD 260
           I +A   I  G+ D++L GG++
Sbjct: 200 IGDAMRMIRTGEADVVLAGGAE 221

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 14  KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 72
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 73  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 130
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 131 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSASATSAHCIGNAVEQIQ 190
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 191 LGKQDIVFAGGGE 203

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSASATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 179 LGKQDIVFAGGGE 191

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+A A+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSAXATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
            G  DI+  GG +
Sbjct: 179 LGKQDIVFAGGGE 191

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLST-GGW 128
           +R V+TGLG V+ +G++      SL EG +GI+  Q F  +   + +  ++K  S     
Sbjct: 5   KRAVITGLGIVSSIGNNQQEVLASLQEGRSGITFAQEFKDAGXRSHVWGDVKLQSEPKDL 64
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
           I  K+ +      IYA +A ++A+ D+G+++    ++   R G+++GS  G  R    G 
Sbjct: 65  IDRKVLRFXSDASIYAYLAXQEAIADSGLSDS---QVSNFRSGLVVGSGGGSPRNQVAGS 121
Query: 189 EAIKV--SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           +A +     K + P+ +  +  +  SA LA      G +YSIS+ACA+S + I +A   I
Sbjct: 122 DAXRTPRGLKGVGPYXVTKAXASGVSACLATPFKIKGVNYSISSACATSAHCIGHALELI 181
Query: 247 IKGDTDIMLCGGSDGM 262
             G  DI+  GG + +
Sbjct: 182 QLGKQDIVFAGGGEEL 197

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLG 220
           S E+D  R  V++G+ +GG   + + ++ +     +K+SP  +   + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
                 +  +AC+S + +I +A   I+ GD D+ +CGG +G I
Sbjct: 160 ARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPI 202

>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 64  HKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSL 123
           +K+  ++ +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I   
Sbjct: 3   YKDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDF 62
Query: 124 STGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL-- 181
                I  ++  + D     AL A   AL DA    +   + D    GV+  +A GG   
Sbjct: 63  HAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYD---MGVVTANACGGFDF 119
Query: 182 ------RVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASS 235
                 ++ ++G +++ V Y+  + FY       + +  +++  G  GPS ++    A  
Sbjct: 120 THREFRKLWSEGPKSVSV-YESFAWFYA------VNTGQISIRHGMRGPSSALVAEQAGG 172
Query: 236 NYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNK 271
             ++ +A   I +G T +++ GG D  + P G V++
Sbjct: 173 LDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQ 207

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSE-FPTRIAAEIKSLSTGGW 128
           +R+V+TG+G VT LG        +L  G   +  +  +D  E   TR+AA +   +    
Sbjct: 6   KRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPAD 65
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGG---LRVLN 185
              K  +   +  +YA+ A + AL DAG     S  +   R GV  GS+ G    +R   
Sbjct: 66  WPRKKTRSMGRVSMYAVRASELALADAGFAGDES--ISDGRMGVAYGSSSGSVEPIRAFG 123
Query: 186 DGFEAIKV------SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
              E+  +      SY +M P       T   +  L  DL   G     S+ACAS + +I
Sbjct: 124 TMLESGSMTDVTSNSYVQMMPH------TTAVNVSLFWDL--KGRIVPTSSACASGSQAI 175
Query: 240 LNATSHIIKGDTDIMLCGGSDGMIIPS 266
             A  +I  G   +ML GG++ +  P+
Sbjct: 176 GYAYENIAMGKQTLMLAGGAEELSGPA 202

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLG 220
           S E+D  R  V++G+ +GG   + + ++ +     +K+SP  +   + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
                 +  +A +S + +I +A   I+ GD D+ +CGG +G I
Sbjct: 160 ARAGVMTPVSAQSSGSEAIAHAWRQIVMGDADVAVCGGVEGPI 202

>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 72  IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGGWI 129
           +VVTG+   T L  DA      LL+  +GI  +      EF  P RI   +  L      
Sbjct: 30  VVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHL--LEEFDHQ 87
Query: 130 SPKIAKKADKYLI-YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
             +I  +   YL   + V  ++   +AG     S E+D +R  V IG+ +G    L   +
Sbjct: 88  LTRIELRRMGYLQRMSTVLSRRLWENAG-----SPEVDTNRLMVSIGTGLGSAEELVFSY 142
Query: 189 EAIKV-SYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           + ++    K +SP  +   + N A+A + ++        +  +ACAS   +I  A   I+
Sbjct: 143 DDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIV 202
Query: 248 KGDTDIMLCGGSDGMI 263
            G+ D  +CGG +  I
Sbjct: 203 LGEADAAICGGVETRI 218

>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPT------RIAAEIKSL 123
             +V+ G+    P  ++   F  +L+ GV  ++D    D   +        R + ++K L
Sbjct: 4   EEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTD----DDRRWKAGLYGLPRRSGKLKDL 59
Query: 124 S----TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG 179
           S    +   + PK A   D  L   L    +A+VD GI       L  +  GV +G +  
Sbjct: 60  SRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSG- 115
Query: 180 GLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW----TGPSYSISTACASS 235
                ++  EA+    + +    + YS+     A++A  L +     GPS ++ TAC+SS
Sbjct: 116 -----SETSEALSRDPETL----VGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSS 166
Query: 236 NYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVN 270
             ++ NA   I  G     + GG + ++ P+ +V 
Sbjct: 167 LMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQ 201

>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 205 YSLTNMASAV----LAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSD 260
           YS+T +A AV    ++  +G  GPS S+ TAC+SS  ++  A   + KG++ + + GG+ 
Sbjct: 146 YSVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAA 205
Query: 261 GMIIP 265
            M  P
Sbjct: 206 VMATP 210

>pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 111  EFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALVAGKKALVDAGITE--QVS 162
            +F   +A +I +    GW      +   I ++ D   +Y LV+  +AL+ +GIT+  +  
Sbjct: 1155 QFDRLVAGQIPT----GWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFY 1210
Query: 163  GELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN-MASAVLAMDLGW 221
              +  S  G  IGS +GG   L  G    +   K +    +  S  N MA+ V  + L  
Sbjct: 1211 KYVHLSEVGNCIGSGVGGTSALR-GMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSS 1269
Query: 222  TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSD 260
            TGP  +   ACA++  S+      I++G   + L GG D
Sbjct: 1270 TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFD 1308

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	275
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	2e-67
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	2e-66
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	2e-66
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	4e-66
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	4e-66
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	6e-66
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	1e-65
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	1e-65
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	2e-65
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	8e-65
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	3e-64
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	6e-63
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	2e-62
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	1e-61
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	2e-61
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	5e-61
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	2e-59
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-55
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	5e-40
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	7e-39
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-10
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	4e-05
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	9e-05

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  214 bits (547), Expect = 2e-67
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 10/206 (4%)

Query: 69  ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
           +RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE         
Sbjct: 2   KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 61

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL------- 181
             P+   + D+   +A+   ++A   +G+       LD +R GV +GSA+          
Sbjct: 62  FGPRELDRMDRASQFAVACAREAFAASGLDP---DTLDPARVGVSLGSAVAAATSLEREY 118

Query: 182 RVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            +L+D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ N
Sbjct: 119 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 178

Query: 242 ATSHIIKGDTDIMLCGGSDGMIIPSG 267
           A   I +G  D+M  G +D  I P  
Sbjct: 179 AVRAIEEGSADVMFAGAADTPITPIV 204

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  211 bits (540), Expect = 2e-66
 Identities = 72/199 (36%), Positives = 105/199 (52%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
            R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      + 
Sbjct: 23  NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYF 82

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K   + D Y +YAL A ++A+  A +       L++ R GVI+ S +GG++ + D   
Sbjct: 83  VKKDTNRFDNYSLYALYAAQEAVNHANLDV---EALNRDRFGVIVASGIGGIKEIEDQVL 139

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +     K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A   I  
Sbjct: 140 RLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 199

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G  D+ML GG++  I P  
Sbjct: 200 GFQDVMLVGGTEASITPFA 218

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  212 bits (541), Expect = 2e-66
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 9/213 (4%)

Query: 62  TKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK 121
            + +    RR+V+TG+G VTPLG   HL    L+ G +GI  + G +    P  +AA + 
Sbjct: 13  IEGRSRLHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVP 72

Query: 122 SLSTGG------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIG 175
             S  G      ++S    K      I A+ A + A+ D+G       E D+   GV IG
Sbjct: 73  RGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWH--PQSEADQVATGVAIG 130

Query: 176 SAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACAS 234
             M  L V+++     +   Y K+SPF++P  L NMA+  +++     GP++++STAC +
Sbjct: 131 MGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTT 190

Query: 235 SNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
             +++ ++   I  GD D+M+ GG+D  I P  
Sbjct: 191 GAHAVGDSFRFIAHGDADVMVAGGTDSCISPLS 223

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  210 bits (538), Expect = 4e-66
 Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTG+GAVTP+G+DA     +  +GV G++ +   +  +FP +IAAE+K      ++
Sbjct: 4   RRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYL 63

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K A+K D++  YA+ + + A+ D+G+      + + +R GV IGS +GG+      +E
Sbjct: 64  EKKEARKMDRFTHYAIASAEMAVQDSGLVI---DDSNANRVGVWIGSGIGGMETFETQYE 120

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
                 ++++SPF++P  + +M S  +++  G  G + +  TACA++  SI +A   I +
Sbjct: 121 IFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIER 180

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           GD D M+ GG++  I    
Sbjct: 181 GDADAMITGGAEAPITKMS 199

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  210 bits (538), Expect = 4e-66
 Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      ++
Sbjct: 7   KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 66

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K AK+ D++  +A+ A ++A+ DA +      EL+    GV+IG+ +GGL+VL D   
Sbjct: 67  DRKEAKRMDRFCHFAVCASQQAINDAKLVI---NELNADEIGVLIGTGIGGLKVLEDQQT 123

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +      + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +  
Sbjct: 124 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 183

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G    M+CGG++  I P  
Sbjct: 184 GYAKAMICGGTEAAITPLS 202

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  210 bits (537), Expect = 6e-66
 Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    I
Sbjct: 18  RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 77

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K  +K D ++ Y +VAG +A+ D+G+      E + +R G  IGS +GGL ++ +   
Sbjct: 78  SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 134

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   I  
Sbjct: 135 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAY 194

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           GD D+M+ GG++    P G
Sbjct: 195 GDADVMVAGGAEKASTPLG 213

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  210 bits (536), Expect = 1e-65
 Identities = 64/201 (31%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 68  KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
           + +R+V+TG+GA++P+G+D      + L+GV GI  I   D   +   +A E+K+ +   
Sbjct: 26  QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 85

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            I  K A++ D++  YA+VA ++A+ DA +      E    R GV IGS +GG+      
Sbjct: 86  HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 142

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
            + +     +++SPF++P  + +MA+  +++DLG  GP+ +  TACA+   SI  A   +
Sbjct: 143 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 202

Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
            +GD D M+ GG++  I    
Sbjct: 203 QRGDADAMITGGTEAPITHMA 223

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  209 bits (535), Expect = 1e-65
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 10/206 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-- 127
           RR+V+TGLG V+PL          LL G +G   +  F+  +   +IA  I         
Sbjct: 10  RRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGT 69

Query: 128 -----WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
                 + PK  +K D +++YA+ A  +AL DAG       + D+ R GV+IGS +GG+ 
Sbjct: 70  FNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWH--PENDEDQVRTGVLIGSGIGGIE 127

Query: 183 VLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
            + +    ++    +++SPF+IP  L N+AS  +++     GP++S+ TACA+  ++I +
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD 187

Query: 242 ATSHIIKGDTDIMLCGGSDGMIIPSG 267
           A   I  GD D+M+ GG++  +    
Sbjct: 188 AARLIAFGDADVMVAGGTESPVSRIS 213

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  209 bits (535), Expect = 2e-65
 Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 11/207 (5%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-- 127
            R+VVTG+G V+PLG    L    L+ G +G+  +      E   ++   ++ ++     
Sbjct: 24  LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEG 83

Query: 128 ------WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL 181
                  +  K  +K D+++  A+VA  +AL +AG       E  + R   ++ S +GG 
Sbjct: 84  GFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWA--PEAEQQRERTATVVASGIGGF 141

Query: 182 RVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
             L +     +    +++SPF IP+ L+N+A+  +++   + GP     TACA+S  +I 
Sbjct: 142 PGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIG 201

Query: 241 NATSHIIKGDTDIMLCGGSDGMIIPSG 267
           +A   I  G+ D++L GG++       
Sbjct: 202 DAMRMIRTGEADVVLAGGAEAAFDKVS 228

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  207 bits (529), Expect = 8e-65
 Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)

Query: 65  KEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLS 124
           K+  ++ +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I    
Sbjct: 4   KDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFH 63

Query: 125 TGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL 184
               I  ++  + D     AL A   AL DA         L     GV+  +A GG    
Sbjct: 64  APDHIPGRLLPQTDPSTRLALTAADWALQDAKADP---ESLTDYDMGVVTANACGGFDFT 120

Query: 185 NDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
           +  F  +     K +S +        + +  +++  G  GPS ++    A    ++ +A 
Sbjct: 121 HREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHA- 179

Query: 244 SHIIKGDTDIMLCGGSDGMIIPSG 267
              I+  T +++ GG D  + P G
Sbjct: 180 RRTIRRGTPLVVSGGVDSALDPWG 203

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  205 bits (524), Expect = 3e-64
 Identities = 76/199 (38%), Positives = 118/199 (59%), Gaps = 5/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+  +  G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+        
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
                   ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177

Query: 249 GDTDIMLCGGSDGMIIPSG 267
           G+ D++L GG++  I P  
Sbjct: 178 GEADLVLAGGTEAAITPMA 196

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  202 bits (516), Expect = 6e-63
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 4/199 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD-CSEFPTRIAAEIKSLSTGGW 128
           +R+V+TG+G VT LG        +L  G   +  +  +D      TR+AA +   +    
Sbjct: 6   KRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPAD 65

Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
              K  +   +  +YA+ A + AL DAG        +   R GV  GS+ G +  +    
Sbjct: 66  WPRKKTRSMGRVSMYAVRASELALADAGFA--GDESISDGRMGVAYGSSSGSVEPIRAFG 123

Query: 189 EAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
             ++      ++       + +  +  +++     G     S+ACAS + +I  A  +I 
Sbjct: 124 TMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIA 183

Query: 248 KGDTDIMLCGGSDGMIIPS 266
            G   +ML GG++ +  P+
Sbjct: 184 MGKQTLMLAGGAEELSGPA 202

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  200 bits (512), Expect = 2e-62
 Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 9/201 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             +VVT + A T +  D       LL G +GI  ++    +++    +I   +K      
Sbjct: 12  PSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDS 70

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            +     ++         + G +    AG  E     +D  R  V++G+ +GG   + + 
Sbjct: 71  HMGRLDMRRMSYVQRMGKLLGGQLWESAGSPE-----VDPDRFAVVVGTGLGGAERIVES 125

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++ +     +K+SP  +   + N A+AV+ + LG      +  +AC+S + +I +A   I
Sbjct: 126 YDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQI 185

Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
           + GD D+ +CGG +G I    
Sbjct: 186 VMGDADVAVCGGVEGPIEALP 206

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  199 bits (509), Expect = 1e-61
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 5/221 (2%)

Query: 48  VAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGF 107
           +A         L          RR+VVTG+G V+ +G +      SL E  +GIS  + +
Sbjct: 1   MAHHHHHHMGTLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEY 60

Query: 108 DCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDK 167
               F  ++      +     +  +  +   +   +  +A  +A+ DAG+TE+   E+  
Sbjct: 61  AELGFRCQVHG-APDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSN 116

Query: 168 SRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY 226
            R G+I+GS     R + D  +  +    K++ PF +P ++++ ASA LA      G +Y
Sbjct: 117 ERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINY 176

Query: 227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           SIS+ACA+SN+ I NA   I  G  D M  GG + +     
Sbjct: 177 SISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLS 217

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  198 bits (507), Expect = 2e-61
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 9/201 (4%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEF--PTRIAAEIKSLSTGG 127
             +VVTG+   T L  DA      LL+  +GI  +      EF  P RI   +       
Sbjct: 28  PYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDH 86

Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
            ++    ++       + V  ++   +AG  E     +D +R  V IG+ +G    L   
Sbjct: 87  QLTRIELRRMGYLQRMSTVLSRRLWENAGSPE-----VDTNRLMVSIGTGLGSAEELVFS 141

Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
           ++ ++    K +SP  +   + N A+A + ++        +  +ACAS   +I  A   I
Sbjct: 142 YDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQI 201

Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
           + G+ D  +CGG +  I    
Sbjct: 202 VLGEADAAICGGVETRIEAVP 222

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  197 bits (503), Expect = 5e-61
 Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 5/200 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K L T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++       +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLS--PEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118

Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178

Query: 248 KGDTDIMLCGGSDGMIIPSG 267
            G  DI+  GG + +     
Sbjct: 179 LGKQDIVFAGGGEELCWEMA 198

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  193 bits (493), Expect = 2e-59
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 20/216 (9%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS--------------EFPTR 115
           RR+VVTGLG VTPLG         L++G  GI  +   D                +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60

Query: 116 IAAEIKSLSTGGWISPKI---AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGV 172
           +AA +   S  G     +   +K    ++ YA+ A  +AL DA        E +K R GV
Sbjct: 61  VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGV 118

Query: 173 IIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTA 231
            IG  +G +  + +  + I     +++SPF+IP  L NMAS  ++M  G+ GP+++  TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178

Query: 232 CASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSG 267
           CA+  +SI +AT  I  GD D+M+ GG++  I    
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS 214

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  190 bits (484), Expect = 4e-55
 Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 15/224 (6%)

Query: 50   MSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC 109
            + +   E+DL   +  + +         G    + +         ++ + G + +     
Sbjct: 923  IQEVIVEEDLEPFEASK-ETAEQFKHQHGDKVDIFEIPETGEY-SVKLLKGAT-LYIPKA 979

Query: 110  SEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALVAGKKALVDAGIT--EQV 161
              F   +A +I +    GW      IS  I  + D   ++ LV+  +A + +GIT   ++
Sbjct: 980  LRFDRLVAGQIPT----GWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEM 1035

Query: 162  SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW 221
               +  S  G   GS MGG+  L   F+         +       +  M++ V  + +  
Sbjct: 1036 YKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISS 1095

Query: 222  TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP 265
            +GP  +   ACA+S  S+      I+ G   I + GG D     
Sbjct: 1096 SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEE 1139

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  147 bits (371), Expect = 5e-40
 Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 15/224 (6%)

Query: 50   MSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC 109
            + +   E+DL   +  + +         G    + +         ++ + G + +     
Sbjct: 1122 IQEVIVEEDLEPFEASK-ETAEQFKHQHGDKVDIFEIPETGE-YSVKLLKGAT-LYIPKA 1178

Query: 110  SEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALVAGKKALVDAGIT--EQV 161
              F   +A +I +    GW      IS  I  + D   ++ LV+  +A + +GIT   ++
Sbjct: 1179 LRFDRLVAGQIPT----GWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEM 1234

Query: 162  SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW 221
               +  S  G   GS MGG+  L   F+         +       +  M++ V  + +  
Sbjct: 1235 YKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISS 1294

Query: 222  TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP 265
            +GP  +   ACA+S  S+      I+ G   I + GG D     
Sbjct: 1295 SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEE 1338

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  143 bits (363), Expect = 7e-39
 Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 13/176 (7%)

Query: 93   SLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW------ISPKIAKKADKYLIYALV 146
              +    G   +      +F   +A +I +    GW      +   I ++ D   +Y LV
Sbjct: 1138 YTVRLRKGA-TLLIPKALQFDRLVAGQIPT----GWDARRYGVPEDIIQQVDPVTLYVLV 1192

Query: 147  AGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIP 204
            +  +AL+ +GIT   +    +  S  G  IGS +GG   L   ++   +           
Sbjct: 1193 SVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQE 1252

Query: 205  YSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSD 260
              +  MA+ V  + L  TGP  +   ACA++  S+      I++G   + L GG D
Sbjct: 1253 SFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFD 1308

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 151 ALVDAGIT-EQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN 209
           A+VD GI    + G    +  GV +G         +D  EA+    + +  + +      
Sbjct: 89  AIVDGGINPASLRG----TSTGVWVG-VSS-----SDASEALSRDPETLVGYSMIGCQRA 138

Query: 210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTV 269
           M +  L+    + GPS +I TAC+SS  ++ +A   I  G+    + GG + ++ P+ ++
Sbjct: 139 MMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSL 198

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 25/127 (19%)

Query: 151 ALVDAGITEQVSGELDKSRCGVIIGSA----MGGLRVLNDGFEAIKVSYKKMSPFYIPYS 206
           A+VD GI       L  +  GV +G +       L    +                  YS
Sbjct: 91  AIVDGGI---NPDSLRGTHTGVWVGVSGSETSEALSRDPETLVG--------------YS 133

Query: 207 LTNMASAV----LAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
           +     A+    L+    + GPS ++ TAC+SS  ++ NA   I  G     + GG + +
Sbjct: 134 MVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVL 193

Query: 263 IIPSGTV 269
           + P+ +V
Sbjct: 194 LKPNTSV 200

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 4e-06
 Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 55/247 (22%)

Query: 7   QSPLCTSPIPYYRNDHALMSSMLQSSKRHKK--LISR--CNFGKTVAMSDAQSEKDLIIT 62
                +S I    +        L  SK ++   L+     N  K     +    K L+ T
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN-AKAWNAFNLSC-KILLTT 272

Query: 63  KHKEPKERRIVVTGLGAVT----PLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAA 118
           + K+      V   L A T     L   +       ++ +  +         + P     
Sbjct: 273 RFKQ------VTDFLSAATTTHISLDHHSMTLTPDEVKSL--LLKYLDCRPQDLP----R 320

Query: 119 EIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAM 178
           E+ +       +P            +++A  +++ D   T      ++  +   II S+ 
Sbjct: 321 EVLT------TNP---------RRLSIIA--ESIRDGLATWDNWKHVNCDKLTTIIESS- 362

Query: 179 GGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS----ISTACAS 234
             L VL       +  + ++S F  P S  ++ + +L++ + W     S    +      
Sbjct: 363 --LNVLEP--AEYRKMFDRLSVF--PPS-AHIPTILLSL-I-WFDVIKSDVMVVVNKLH- 412

Query: 235 SNYSILN 241
             YS++ 
Sbjct: 413 -KYSLVE 418

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 30/127 (23%), Positives = 42/127 (33%), Gaps = 25/127 (19%)

Query: 151 ALVDAGITEQVSGELDKSRCGVIIGSA----MGGLRVLNDGFEAIKVSYKKMSPFYIPYS 206
           AL  AG        L  S  GV  G              D                  Y 
Sbjct: 127 ALERAGH---DPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLG--------------YV 169

Query: 207 LTNMASAV----LAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM 262
            T  AS+V    +A  LG  GP+ ++ TAC+S   ++  A   + + +  + L GG   M
Sbjct: 170 GTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVM 229

Query: 263 IIPSGTV 269
             P    
Sbjct: 230 SSPGAFT 236

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 24/126 (19%)

Query: 151 ALVDAGITEQVSGELDKSRCGVIIGSAM---GGLRVLNDGFEAIKVSYKKMSPFYIPYSL 207
            + +AGI       L  +  GV +G A    G      +  E               YS+
Sbjct: 106 LVENAGI---DPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEG--------------YSV 148

Query: 208 TNMASAV----LAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
           T +A AV    ++  +G  GPS S+ TAC+SS  ++  A   + KG++ + + GG+  M 
Sbjct: 149 TGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMA 208

Query: 264 IPSGTV 269
            P   V
Sbjct: 209 TPGVFV 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	275
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	100.0
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	100.0
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	100.0
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	100.0
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	100.0
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	100.0
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	100.0
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	100.0
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	100.0
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	100.0
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	100.0
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	100.0
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	100.0
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	100.0
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	100.0
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	100.0
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	100.0
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.95
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.95
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.94
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.6
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.6
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.59
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.58
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.55
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.55
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.55
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.52
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.51
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.5
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.5
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.5
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.47
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.47
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.46
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.44
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.41
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.41
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.41
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.39
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.38
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.38
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.37
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.31
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.27
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.23
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.22
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.21
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.18
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.18
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.15
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.12
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.1
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.1
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.09
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.04
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	98.99
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	98.98
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	98.97
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	98.94
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	98.93
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	98.9
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	98.89
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	98.85
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	98.83
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	98.78
3v7i_A	413	Putative polyketide synthase; type III polyketide	98.74
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	98.72
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	98.65
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	98.51
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.5
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	98.44
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	98.36
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	98.35
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.07

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=100.00  E-value=3.6e-42  Score=320.76  Aligned_cols=210  Identities=35%  Similarity=0.576  Sum_probs=193.0

Q ss_pred             ccCCCCCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHH
Q 023909           62 TKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYL  141 (275)
Q Consensus        62 ~~~~~~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~  141 (275)
                      +..+...+++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++|+|++||+.+||++++++.|||++
T Consensus        10 ~~~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~   89 (427)
T 3ho9_A           10 HGSACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFI   89 (427)
T ss_dssp             -------CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHH
T ss_pred             ccCCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHH
Confidence            34445567899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       142 rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ||+++++++||+|||++++   +++..++|||+|++.+++...++.+..+ ..+...+.|+.+++...+.++++|++.||
T Consensus        90 ~l~l~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  166 (427)
T 3ho9_A           90 QYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG  166 (427)
T ss_dssp             HHHHHHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhC
Confidence            9999999999999999964   4678999999999999998888888877 77788899999999999999999999999


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||+++|++||+|+++||++|+++|++|+||+|||||+|.+++|..+.+|.++
T Consensus       167 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  220 (427)
T 3ho9_A          167 LRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAA  220 (427)
T ss_dssp             CCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             CCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999998764

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=100.00  E-value=2.4e-41  Score=315.27  Aligned_cols=207  Identities=31%  Similarity=0.538  Sum_probs=191.6

Q ss_pred             CCCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecC-------CCCCCCCCCHHHHhhCC
Q 023909           66 EPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------SLSTGGWISPKIAKKAD  138 (275)
Q Consensus        66 ~~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~-------~fd~~~~i~~~~~~~~d  138 (275)
                      +-.|++|||||||+++|.|.++++||++|++|+++|+++++|+...++..++++++       +||+.+||++++++.||
T Consensus         6 ~~~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d   85 (428)
T 3kzu_A            6 HHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVD   85 (428)
T ss_dssp             ---CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSC
T ss_pred             cccccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCC
Confidence            34588999999999999999999999999999999999999999999999999998       79999899999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAM  217 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (275)
                      |+++|+++++++||+|||+++++  .++..++|||+|++.+++...++++..+ ..+...++|+.+++...+.++++|++
T Consensus        86 ~~~~l~l~aa~~AL~dAGl~~~~--~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  163 (428)
T 3kzu_A           86 PFIVYAVGAADQALDDAGWHPEN--DEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI  163 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCS--HHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCChhh--hccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence            99999999999999999998642  1456789999999999999888888877 77788899999999999999999999


Q ss_pred             HhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          218 DLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       218 ~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      .||++||+++|+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  220 (428)
T 3kzu_A          164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAAC  220 (428)
T ss_dssp             HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999999999998764

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=100.00  E-value=4.4e-41  Score=312.19  Aligned_cols=205  Identities=32%  Similarity=0.595  Sum_probs=194.3

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHH
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~  146 (275)
                      |.+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++++|++||+.+||++++++.|||+++|+++
T Consensus         1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~   80 (413)
T 3o04_A            1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA   80 (413)
T ss_dssp             CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred             CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence            45689999999999999999999999999999999999999998899999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 023909          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (275)
Q Consensus       147 aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~  225 (275)
                      ++++||+|||++++   ++++.|+|||+|++.+++...++.+..+ ..+...+.|+.+++...++++++|++.||++||+
T Consensus        81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~  157 (413)
T 3o04_A           81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN  157 (413)
T ss_dssp             HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred             HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence            99999999999864   4778999999999999999888888887 7788889999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++|+++|+|+++||++|+++|++|+||+|||||+|.+++|..+.+|..+
T Consensus       158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~  206 (413)
T 3o04_A          158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTAN  206 (413)
T ss_dssp             ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999998764

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=6.5e-41  Score=311.34  Aligned_cols=205  Identities=36%  Similarity=0.621  Sum_probs=190.8

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHH
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~  146 (275)
                      +.|++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++++|++||+.++++++++++|||+++|+++
T Consensus         4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~   83 (416)
T 1e5m_A            4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC   83 (416)
T ss_dssp             --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred             CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 023909          147 AGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (275)
Q Consensus       147 aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~  225 (275)
                      ++++||+|||++++   ++++.|+|||+|++.+++..+++.+..+ ..+...++|+.+++.+.+.++++|++.||++||+
T Consensus        84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~  160 (416)
T 1e5m_A           84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN  160 (416)
T ss_dssp             HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred             HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence            99999999999864   4678899999999999988888887776 6777888999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++|+++|+||++||++|+++|++|+||+|||||+|..++|..+.+|.++
T Consensus       161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~  209 (416)
T 1e5m_A          161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASA  209 (416)
T ss_dssp             ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHc
Confidence            9999999999999999999999999999999999998899999998764

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=100.00  E-value=1.4e-40  Score=308.85  Aligned_cols=203  Identities=23%  Similarity=0.328  Sum_probs=191.1

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCC-CCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCS-EFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALV  146 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~-~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~  146 (275)
                      .|++|+|||||+++|+|.++++||++|++|+++++++++|+.. .++.+++++|++||+.+||++++.+.|||+++|+++
T Consensus         4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~   83 (412)
T 4ewg_A            4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR   83 (412)
T ss_dssp             CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred             CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence            4689999999999999999999999999999999999988876 788899999999999999999999999999999999


Q ss_pred             HHHHHHHHcCC-CCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 023909          147 AGKKALVDAGI-TEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (275)
Q Consensus       147 aa~~Al~dAG~-~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp  224 (275)
                      ++++||+|||+ +++   +++..++|||+|++.+++...++++..+ ..+...++++.++....+.++++|++.||++||
T Consensus        84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp  160 (412)
T 4ewg_A           84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR  160 (412)
T ss_dssp             HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence            99999999999 543   4678999999999999999999988888 777888999999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|+++|+||++||++|+++|++|+||+|||||+|. ++|..+.+|.++
T Consensus       161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~  209 (412)
T 4ewg_A          161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTL  209 (412)
T ss_dssp             EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTT
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHh
Confidence            9999999999999999999999999999999999999 999999998765

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=100.00  E-value=1.3e-40  Score=310.64  Aligned_cols=210  Identities=35%  Similarity=0.540  Sum_probs=194.6

Q ss_pred             ccCCCCCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHH
Q 023909           62 TKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYL  141 (275)
Q Consensus        62 ~~~~~~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~  141 (275)
                      ++...|.|++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.+++++|++||+.++++++++++|||++
T Consensus        15 ~~~~~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~   94 (430)
T 1ox0_A           15 PRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYS   94 (430)
T ss_dssp             CCCSSCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHH
T ss_pred             CCcccccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHH
Confidence            34445678899999999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       142 rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      +|+++++++||+|||++++   +++..++|||+|++.+++...++.+..+ ..+...++|+.+++..++.++++|++.||
T Consensus        95 ~l~l~aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  171 (430)
T 1ox0_A           95 LYALYAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG  171 (430)
T ss_dssp             HHHHHHHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence            9999999999999999864   4678899999999999988888877777 77788899999999999999999999999


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||+++|+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|.++
T Consensus       172 l~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  225 (430)
T 1ox0_A          172 ANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQAL  225 (430)
T ss_dssp             CCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             CCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999999888764

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=2.2e-40  Score=307.04  Aligned_cols=202  Identities=39%  Similarity=0.694  Sum_probs=189.7

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++++| +||+.+++++++.++|||+++|+++++
T Consensus         1 M~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa   79 (408)
T 1j3n_A            1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA   79 (408)
T ss_dssp             CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999889999999999 899988899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+|||++++   +++..++|||+|++.+++..+++.+..+ ..+...++|+.+++..++.++++|++.||++||+++
T Consensus        80 ~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~  156 (408)
T 1j3n_A           80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST  156 (408)
T ss_dssp             HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred             HHHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeC
Confidence            999999999864   3667899999999999998888888777 777888999999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       157 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  203 (408)
T 1j3n_A          157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVM  203 (408)
T ss_dssp             BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhc
Confidence            99999999999999999999999999999999998999999998754

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=100.00  E-value=2.7e-40  Score=308.96  Aligned_cols=203  Identities=32%  Similarity=0.588  Sum_probs=189.9

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++++|++||+.++++++++++|||+++|+++++
T Consensus        27 ~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa  106 (437)
T 2gqd_A           27 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAA  106 (437)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHH
T ss_pred             CCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999899999999999999987899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+|||++++   ++++.|+|||+|++.+++..+++.+..+ ..+...++|+.+++...+.++++|++.||++||+++
T Consensus       107 ~~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~  183 (437)
T 2gqd_A          107 REAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA  183 (437)
T ss_dssp             HHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEEC
T ss_pred             HHHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEE
Confidence            999999999864   4678899999999999988888877776 677778899999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|..+
T Consensus       184 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  230 (437)
T 2gqd_A          184 TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSAS  230 (437)
T ss_dssp             BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            99999999999999999999999999999999998999999998764

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=100.00  E-value=2.6e-40  Score=309.15  Aligned_cols=203  Identities=32%  Similarity=0.515  Sum_probs=188.7

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCC------CCCCCCCCHHHHhhCCHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS------LSTGGWISPKIAKKADKYLI  142 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~------fd~~~~i~~~~~~~~d~~~r  142 (275)
                      .++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++|+|++      ||+.+|++++++++|||+++
T Consensus        20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~   99 (438)
T 2iwz_A           20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI   99 (438)
T ss_dssp             ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence            468999999999999999999999999999999999999888899999999987      99988899999999999999


Q ss_pred             HHHHHHHHHHHHcCCCC-cccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          143 YALVAGKKALVDAGITE-QVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       143 l~l~aa~~Al~dAG~~~-~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      |+++++++||+|||+++ ++   +++.++|||+|++.+++..+++.+..+ ..+...++|+.+++..++.++++|++.||
T Consensus       100 l~l~aa~~AL~dAGl~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  176 (438)
T 2iwz_A          100 MAIGAAELAMKDSGWHPQSE---ADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK  176 (438)
T ss_dssp             HHHHHHHHHHHHHTCCCCSH---HHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCCccc---ccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence            99999999999999985 33   456789999999999998888887777 67777899999999999999999999999


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||+++|+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|.++
T Consensus       177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  230 (438)
T 2iwz_A          177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRA  230 (438)
T ss_dssp             CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhc
Confidence            999999999999999999999999999999999999999988999999998764

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=2.1e-40  Score=307.87  Aligned_cols=203  Identities=24%  Similarity=0.397  Sum_probs=189.5

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      ..++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++++|++||+.+|+++++.++|||+++|++++
T Consensus         7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a   86 (415)
T 1tqy_B            7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA   86 (415)
T ss_dssp             ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888899999999999998889999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      +++||+|||++++   +++..++|||+|++.+++...++.+..+ ..+...++|+.+++...+.++++|++.||++||++
T Consensus        87 a~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~  163 (415)
T 1tqy_B           87 ADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS  163 (415)
T ss_dssp             HHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred             HHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence            9999999999864   4668899999999999999888888887 77778899999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|+++|+||++||++|+++|++| ||+|||||+|.+++|..+.+|.++
T Consensus       164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~  210 (415)
T 1tqy_B          164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIAS  210 (415)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTT
T ss_pred             eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhc
Confidence            99999999999999999999999 999999999999999999999865

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.8e-40  Score=305.09  Aligned_cols=201  Identities=23%  Similarity=0.297  Sum_probs=186.6

Q ss_pred             CCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCC--CCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYAL  145 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l  145 (275)
                      .+++|+|||||+++|+|.++++||++|++|+++++++++|+  ...++.+++|+|++ |+.+|++++++++|||+++|++
T Consensus        26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~l  104 (434)
T 2gp6_A           26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMST  104 (434)
T ss_dssp             TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHHH
T ss_pred             CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHHH
Confidence            45689999999999999999999999999999999999887  56788899999988 8877899999999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCc
Q 023909          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGP  224 (275)
Q Consensus       146 ~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp  224 (275)
                      +++++||+|||+.     ++++.++|||+|++.+++..+++.+..+ ..+...++|+.+++..++.++++|++.||++||
T Consensus       105 ~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp  179 (434)
T 2gp6_A          105 VLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAG  179 (434)
T ss_dssp             HHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSC
T ss_pred             HHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCC
Confidence            9999999999983     3568899999999999998888888877 677778999999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|+++|+|+++||++|+++|++|+||+|||||+|..+.|..+.+|+++
T Consensus       180 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  229 (434)
T 2gp6_A          180 VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQM  229 (434)
T ss_dssp             EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTT
T ss_pred             eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=100.00  E-value=7.1e-40  Score=304.29  Aligned_cols=202  Identities=23%  Similarity=0.361  Sum_probs=186.2

Q ss_pred             CCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCC--CCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHH
Q 023909           67 PKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--CSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYA  144 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~  144 (275)
                      ..+++|+|||||+++|+|.++++||++|++|+++++++++|+  ...++.+++|+|++ |+.+|++++++++|||+++|+
T Consensus         9 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~   87 (416)
T 2wge_A            9 GGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMG   87 (416)
T ss_dssp             TSSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHH
T ss_pred             CCCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHH
Confidence            346789999999999999999999999999999999999887  55788899999988 887789999999999999999


Q ss_pred             HHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCC
Q 023909          145 LVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG  223 (275)
Q Consensus       145 l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G  223 (275)
                      ++++++||+|||+.     ++++.|+|||+|++.+++...++.+..+ ..+...++|+.+.+...+.++++|++.||++|
T Consensus        88 l~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g  162 (416)
T 2wge_A           88 KLLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARA  162 (416)
T ss_dssp             HHHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCC
Confidence            99999999999983     3567899999999999998888888777 67778899999999999999999999999999


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          224 PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       224 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |+++|++||+|+++||++|+++|++|+||++||||+|.+++|..+.+|..+
T Consensus       163 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~  213 (416)
T 2wge_A          163 GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMM  213 (416)
T ss_dssp             CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTT
T ss_pred             CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhc
Confidence            999999999999999999999999999999999999998899888888753

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=100.00  E-value=1.2e-40  Score=308.62  Aligned_cols=201  Identities=31%  Similarity=0.466  Sum_probs=183.5

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++++|+ ||+.+|+++++.++|||+++|+++++
T Consensus         1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa   79 (406)
T 2vba_A            1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM   79 (406)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred             CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHH
Confidence            46899999999999999999999999999999999988887788889999999 99999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCC-CeEEEEEeecCCChhhHHHHHHHHH--hccCCCCCcccccccchHHHHHHHHHhCCCCcc
Q 023909          149 KKALVDAGITEQVSGELDK-SRCGVIIGSAMGGLRVLNDGFEAIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPS  225 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~-~~~gv~vG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~  225 (275)
                      ++||+|||+++++   ++. .|+|||+|++.+++...++.+..+.  .+...++|+.+++...+.++++|++.||++||+
T Consensus        80 ~~Al~dAg~~~~~---i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~  156 (406)
T 2vba_A           80 EQAIADAGLSPEA---YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVN  156 (406)
T ss_dssp             HHHHHHHTCCHHH---HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCE
T ss_pred             HHHHHHCCCChhH---cCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCce
Confidence            9999999998543   556 8999999999999988888777663  445567888888889999999999999999999


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+. |.++
T Consensus       157 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~  204 (406)
T 2vba_A          157 YSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAM  204 (406)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHT
T ss_pred             eeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-Hhhc
Confidence            99999999999999999999999999999999999988887777 7654

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=5.7e-40  Score=305.68  Aligned_cols=201  Identities=26%  Similarity=0.404  Sum_probs=181.7

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCC-CCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW-ISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~-i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++++ +||+.+| |++++++.|||+++|+++++
T Consensus         3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa   81 (424)
T 1tqy_A            3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA   81 (424)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence            589999999999999999999999999999999999999989999999999 8999998 99999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH---HhccCCCCCcccccccchHHHH----HHHHHhCC
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI---KVSYKKMSPFYIPYSLTNMASA----VLAMDLGW  221 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~----~ia~~~~l  221 (275)
                      ++||+|||++++   ++++.|+|||+|++.+++...++.+..+   ..+....+++.+....++..++    +|++.||+
T Consensus        82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl  158 (424)
T 1tqy_A           82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA  158 (424)
T ss_dssp             HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence            999999999864   4678899999999999998888877766   2445566777666665555455    99999999


Q ss_pred             CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          222 TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       222 ~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+.+|..+
T Consensus       159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  211 (424)
T 1tqy_A          159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAI  211 (424)
T ss_dssp             CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhh
Confidence            99999999999999999999999999999999999999998999999988764

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=100.00  E-value=3.6e-40  Score=307.33  Aligned_cols=206  Identities=29%  Similarity=0.416  Sum_probs=186.1

Q ss_pred             CCCCCCCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHH
Q 023909           64 HKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIY  143 (275)
Q Consensus        64 ~~~~~~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl  143 (275)
                      ...+.|++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++|+ .+||+.+||++++++.|||+++|
T Consensus        17 ~~~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l   95 (428)
T 3mqd_A           17 QGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAW   95 (428)
T ss_dssp             -----CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHH
T ss_pred             CCCCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHH
Confidence            33456789999999999999999999999999999999999888877888889888 47999888999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCC
Q 023909          144 ALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (275)
Q Consensus       144 ~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~  222 (275)
                      +++++++||+|||+++++   ++..++|||+|++.+++...++++..+ ..+...++++.+++...+.++++|++.||++
T Consensus        96 ~~~aa~~Al~dAGl~~~~---i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~  172 (428)
T 3mqd_A           96 NHIAMDQAIADAGLTEEE---VSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIK  172 (428)
T ss_dssp             HHHHHHHHHHHHTCCHHH---HSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHcCCChhH---ccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCC
Confidence            999999999999998644   668999999999999888778877777 6788889999999999999999999999999


Q ss_pred             CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          223 GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       223 Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ||+++|+++|+||++||++|+++|++|+||+|||||+|. +++....+|.++
T Consensus       173 gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~  223 (428)
T 3mqd_A          173 GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAM  223 (428)
T ss_dssp             SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHh
Confidence            999999999999999999999999999999999999999 677777777654

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=100.00  E-value=1.9e-39  Score=304.37  Aligned_cols=203  Identities=27%  Similarity=0.466  Sum_probs=190.1

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecC--------CCCCCCCCCHHHHhhCCHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK--------SLSTGGWISPKIAKKADKY  140 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~--------~fd~~~~i~~~~~~~~d~~  140 (275)
                      +++|+|||||+++|+|.++++||++|++|+++++++++|+...++.+++|+|+        +||+.+||++++++.|||+
T Consensus        23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~  102 (451)
T 4ddo_A           23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF  102 (451)
T ss_dssp             -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred             CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence            47899999999999999999999999999999999999988889999999998        7999988999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCC-CCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHH
Q 023909          141 LIYALVAGKKALVDAGITEQVSGEL-DKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~-~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ++|+++++++||+|||+++++   + +..++|||+|++.+++...++++..+ ..+...++++.++....+.++++|++.
T Consensus       103 ~~L~l~Aa~~AL~dAGl~~~~---i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  179 (451)
T 4ddo_A          103 IQMAMVAADEALAEAGWAPEA---EQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIK  179 (451)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCS---HHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCChhh---cccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHH
Confidence            999999999999999999643   5 67899999999999999888888877 777788999999999999999999999


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ||++||+++|+++|+|+++||++|+++|++|+||+|||||+|..++|..+.+|.++
T Consensus       180 lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~  235 (451)
T 4ddo_A          180 HRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAA  235 (451)
T ss_dssp             HTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             hcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988764

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=100.00  E-value=1.6e-38  Score=320.77  Aligned_cols=197  Identities=23%  Similarity=0.363  Sum_probs=174.3

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCC-CCCCCCC-CcceeeecCC---CCCCCC-CCHHHHhhCCHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQ-GFDCSEF-PTRIAAEIKS---LSTGGW-ISPKIAKKADKYLI  142 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~-~~~~~~~-~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~~r  142 (275)
                      +++||||||||++|+|.++++||++|.+|++++++++ +|+...+ .....|++++   ||+.+| |+|+|++.|||+||
T Consensus         3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r   82 (965)
T 3hhd_A            3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR   82 (965)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence            5799999999999999999999999999999999984 4654322 2344566655   999999 99999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC
Q 023909          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (275)
Q Consensus       143 l~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~  222 (275)
                      |+++++|+||+|||++++.   +++.++|||+|++.+++.      ..+..+...+.++.+.+...++++++|++.||++
T Consensus        83 L~leaa~eALedAGi~~~~---i~~~~~Gv~vG~~~~d~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~  153 (965)
T 3hhd_A           83 LLLEVTYEAIVDGGINPDS---LRGTHTGVWVGVSGSETS------EALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR  153 (965)
T ss_dssp             HHHHHHHHHHHHTTCCGGG---GTTSCCEEEEEECCCHHH------HHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHcCCChHH---cCCceeEEEEeccchhHH------HHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence            9999999999999999654   678999999999876543      2335566778888889999999999999999999


Q ss_pred             CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          223 GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       223 Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ||+++|++||+||++|||+||++|++|+||+|||||+|.+++|..+.+|+++
T Consensus       154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~  205 (965)
T 3hhd_A          154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRL  205 (965)
T ss_dssp             SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHH
T ss_pred             CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999865

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=8.9e-39  Score=346.59  Aligned_cols=197  Identities=21%  Similarity=0.341  Sum_probs=175.6

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeC-CCCCCCCC-CcceeeecCC---CCCCCC-CCHHHHhhCCHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDI-QGFDCSEF-PTRIAAEIKS---LSTGGW-ISPKIAKKADKYLI  142 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~-~~~~~~~~-~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~~r  142 (275)
                      |++||||||||++|+|.++++||++|.+|++++.+. .+|+...+ ....+|++++   ||+.+| |+|+|++.||||||
T Consensus         1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r   80 (2512)
T 2vz8_A            1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR   80 (2512)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred             CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence            468999999999999999999999999999999998 45765432 2456777765   999999 99999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC
Q 023909          143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT  222 (275)
Q Consensus       143 l~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~  222 (275)
                      |+|+++||||||||++++   ++.+.+||||+|++.++|.      ..+..+...++++.+++...+++++||||.|||+
T Consensus        81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~  151 (2512)
T 2vz8_A           81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDAS------EALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK  151 (2512)
T ss_dssp             HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHHH------HHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHHH------HHHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence            999999999999999864   4678999999999876543      2224456678889999999999999999999999


Q ss_pred             CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          223 GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       223 Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ||+++|+||||||++|||+||++|++|+||+|||||+|.+++|..+.+|+++
T Consensus       152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~  203 (2512)
T 2vz8_A          152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKL  203 (2512)
T ss_dssp             SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHT
T ss_pred             CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccC
Confidence            9999999999999999999999999999999999999999999999999875

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=100.00  E-value=6.1e-39  Score=299.29  Aligned_cols=199  Identities=34%  Similarity=0.553  Sum_probs=179.5

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCC--------------CCCCcceeeecC------CCCCCCCC
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDC--------------SEFPTRIAAEIK------SLSTGGWI  129 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~--------------~~~~~~~~g~i~------~fd~~~~i  129 (275)
                      ++|+|||||+++|+|.++++||++|++|+++++++++|+.              ..++.+++++|+      +||+.+|+
T Consensus         1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~   80 (431)
T 2ix4_A            1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL   80 (431)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred             CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence            4799999999999999999999999999999999988872              356788999998      68887777


Q ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHcCC-CCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCccccccc
Q 023909          130 SPKIAKKADKYLIYALVAGKKALVDAGI-TEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSL  207 (275)
Q Consensus       130 ~~~~~~~~d~~~rl~l~aa~~Al~dAG~-~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  207 (275)
                      +++   +|||+++|+++++++||+|||+ ++++   +++.|+|||+|++.+++..+++.+..+ ..+...++|+.+++..
T Consensus        81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  154 (431)
T 2ix4_A           81 NSK---AVANFIGYAVCAADEALRDAEWLPTEE---EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL  154 (431)
T ss_dssp             CST---TCCHHHHHHHHHHHHHHHHTTCCCCSH---HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred             Chh---hCCHHHHHHHHHHHHHHHHcCCCCccc---cCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence            776   8999999999999999999999 7543   556789999999999988888877777 5666788999999999


Q ss_pred             chHHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          208 TNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       208 ~~~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      .+.++++|++.||++||+++|+++|+|+++||++|+++|++|+||+|||||+|.+++|..+.+|.++
T Consensus       155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  221 (431)
T 2ix4_A          155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRS  221 (431)
T ss_dssp             TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999999998999988888754

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=100.00  E-value=5.4e-37  Score=308.37  Aligned_cols=196  Identities=21%  Similarity=0.257  Sum_probs=171.2

Q ss_pred             CCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCC--C-CCCCCCCcceeeecCC---CCCCCC-CCHHHHhhCCHH
Q 023909           69 ERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQ--G-FDCSEFPTRIAAEIKS---LSTGGW-ISPKIAKKADKY  140 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~--~-~~~~~~~~~~~g~i~~---fd~~~~-i~~~~~~~~d~~  140 (275)
                      .++|+|||||+++|+| .++++||++|.+|++++++++  | |+. +...+++|++++   ||+.+| |+++|++.|||+
T Consensus        38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~  116 (917)
T 2hg4_A           38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ  116 (917)
T ss_dssp             HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHH
T ss_pred             CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHH
Confidence            3589999999999987 789999999999999999883  4 532 344788999974   999999 999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      +||+++++|+||+|||++++   ++++.+||||+|++.+++....      ......+.++.+++...++++++|++.||
T Consensus       117 ~rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~~------~~~~~~~~~~~~~g~~~~~~a~ris~~lg  187 (917)
T 2hg4_A          117 QRIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPRP------DEAPDEVLGYVGTGTASSVASGRVAYCLG  187 (917)
T ss_dssp             HHHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCCT------TSSCGGGGGGHHHHHCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhhh------hcCccccCcccccccccchHHHHHHHhcC
Confidence            99999999999999999965   4678999999999987764211      22344566777778888999999999999


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||+++|+++|+||++||++||++|++|+||+|||||+|.+++|..+.+|.++
T Consensus       188 l~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~  241 (917)
T 2hg4_A          188 LEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQ  241 (917)
T ss_dssp             CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTS
T ss_pred             CCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhc
Confidence            999999999999999999999999999999999999999999999988888754

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=100.00  E-value=1.6e-37  Score=312.24  Aligned_cols=196  Identities=21%  Similarity=0.290  Sum_probs=171.7

Q ss_pred             CCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCC--C-CCCCC-----------CCcceeeecCC---CCCCCC-C
Q 023909           69 ERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQ--G-FDCSE-----------FPTRIAAEIKS---LSTGGW-I  129 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~--~-~~~~~-----------~~~~~~g~i~~---fd~~~~-i  129 (275)
                      .++|+||||||++|+| .++++||++|.+|++++++++  | |+...           .+++++|++++   ||+.+| |
T Consensus         5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i   84 (915)
T 2qo3_A            5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV   84 (915)
T ss_dssp             CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred             CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence            4689999999999998 999999999999999999883  4 65322           24678999975   999999 9


Q ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 023909          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (275)
Q Consensus       130 ~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
                      +++|++.|||+++|+++++|+||+|||+++++   +++.+||||+|++.+++....       .....++++.+++...+
T Consensus        85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~~---i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~~  154 (915)
T 2qo3_A           85 SPREAAAMDPQQRLLLETSWELVENAGIDPHS---LRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAPA  154 (915)
T ss_dssp             CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGG---GTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCHH
T ss_pred             CHHHHHhCCHHHHHHHHHHHHHHHHcCCChHH---cCCcceEEEEEecCchHHhhh-------ccccccccccccccccc
Confidence            99999999999999999999999999999654   678999999999888775322       12345677788888889


Q ss_pred             HHHHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          210 MASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       210 ~~a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++++|++.||++||+++|+++|+||++||++||++|++|+||+|||||+|.+++|..+.+|.++
T Consensus       155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~  219 (915)
T 2qo3_A          155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQ  219 (915)
T ss_dssp             HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999998764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.95  E-value=5.2e-29  Score=260.05  Aligned_cols=192  Identities=23%  Similarity=0.285  Sum_probs=165.1

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecC-CCCCCCC-CCHHHHhhCCHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~rl~l~a  147 (275)
                      .+|+|++       ..+.++||++|.+|++++.+..    ..++..++|+|+ +||+.+| |++++++.|||+++|++++
T Consensus      1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1218 (1887)
T 2uv8_A         1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVS 1218 (1887)
T ss_dssp             GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHH
T ss_pred             CceeEee-------cCchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHH
Confidence            5677775       3467899999999999999862    245678999997 6999999 9999999999999999999


Q ss_pred             HHHHHHHcCCC-Cccc-CCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH-hCCCCc
Q 023909          148 GKKALVDAGIT-EQVS-GELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD-LGWTGP  224 (275)
Q Consensus       148 a~~Al~dAG~~-~~~~-~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-~~l~Gp  224 (275)
                      +++||+||||. |.++ ..++..++|||+|++.+++..+...+..... ...+.++.+...+.|.++++|++. ||++||
T Consensus      1219 a~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP 1297 (1887)
T 2uv8_A         1219 VVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGP 1297 (1887)
T ss_dssp             HHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTT-TCCCCTTHHHHHSTTHHHHHHHHHTTCCCSC
T ss_pred             HHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHh-cCCCCcchhhcchhhHHHHHHHHHHcCCccc
Confidence            99999999995 4321 1256889999999999999877766654311 234777888888899999999995 999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|++||+||++||++||++|++|+||+|||||+|. ++|..+.+|.+|
T Consensus      1298 ~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m 1346 (1887)
T 2uv8_A         1298 IKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNM 1346 (1887)
T ss_dssp             CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHh
Confidence            9999999999999999999999999999999999999 799999999876

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.95  E-value=3.1e-29  Score=261.24  Aligned_cols=192  Identities=23%  Similarity=0.299  Sum_probs=165.5

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecC-CCCCCCC-CCHHHHhhCCHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~rl~l~a  147 (275)
                      .+|.|+.       ..+.++||++|.+|++++.+..    ..++..++|+|+ +||+.+| |++++++.|||+++|+|++
T Consensus      1125 ~~~~i~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1193 (1878)
T 2uv9_A         1125 DKVEIFE-------IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVS 1193 (1878)
T ss_dssp             GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred             CCeeEee-------CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHH
Confidence            4677763       4667899999999999999852    245678999998 6999999 9999999999999999999


Q ss_pred             HHHHHHHcCCC-Cccc-CCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH-HhCCCCc
Q 023909          148 GKKALVDAGIT-EQVS-GELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM-DLGWTGP  224 (275)
Q Consensus       148 a~~Al~dAG~~-~~~~-~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~~~l~Gp  224 (275)
                      +++||+||||+ |.++ ..++..++|||+|++.+++..+...+..... ...+.++.+.+.+.|.++++|++ .|+++||
T Consensus      1194 a~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP 1272 (1878)
T 2uv9_A         1194 VAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYL-DKPVQKDILQESFVNTMAAWVNMLLLSSTGP 1272 (1878)
T ss_dssp             HHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTT-TCCCCSCTTGGGSHHHHHHHHHHHTCCCCCC
T ss_pred             HHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHh-cCCCCchhhhcchHHHHHHHHHHHhcCCCCC
Confidence            99999999997 4321 1256889999999999999877766654311 23477888889999999999999 4999999


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|++||+||++||++||+.|++|+||+|||||+|. ++|..+.+|.+|
T Consensus      1273 ~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m 1321 (1878)
T 2uv9_A         1273 IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANM 1321 (1878)
T ss_dssp             BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHH
T ss_pred             eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHh
Confidence            9999999999999999999999999999999999999 899999999876

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.8e-29  Score=256.55  Aligned_cols=184  Identities=24%  Similarity=0.301  Sum_probs=159.4

Q ss_pred             CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecC-CCCCCCC-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCC-Ccc
Q 023909           85 DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGIT-EQV  161 (275)
Q Consensus        85 ~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~-~~~  161 (275)
                      .+.++||++|.+|++++.+.    ...++..++|+|+ +||+.+| |++++++.|||+++|+++++++||+|||++ |.+
T Consensus       959 ~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~e 1034 (1688)
T 2pff_A          959 PETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYE 1034 (1688)
T ss_dssp             CCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGG
T ss_pred             CCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHH
Confidence            46789999999999999984    3356678899997 6999999 999999999999999999999999999997 433


Q ss_pred             -cCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH-HhCCCCcccccchhhhHHHHHH
Q 023909          162 -SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM-DLGWTGPSYSISTACASSNYSI  239 (275)
Q Consensus       162 -~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~~~l~Gp~~~v~taCsS~l~Al  239 (275)
                       ...++..++|||+|++.+++..+...+..... ...+.++.+.....|.+++++++ .||++||+++|++||+||++||
T Consensus      1035 i~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~-~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL 1113 (1688)
T 2pff_A         1035 MYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1113 (1688)
T ss_dssp             GGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS-CCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHH
T ss_pred             hccccCCceEEEEecccCCCHHHHHHHHHHHHh-cCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHH
Confidence             12266899999999999998877776654311 23477778888889999999999 7999999999999999999999


Q ss_pred             HHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          240 LNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       240 ~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      ++||++|++|+||+|||||+|. ++|..+.+|.+|
T Consensus      1114 ~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~m 1147 (1688)
T 2pff_A         1114 DIGVETILSGKARICIVGGYDD-FQEEGSFEFGNM 1147 (1688)
T ss_dssp             HHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTT
T ss_pred             HHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhc
Confidence            9999999999999999999999 688888888765

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.94  E-value=7.3e-27  Score=253.81  Aligned_cols=181  Identities=20%  Similarity=0.286  Sum_probs=148.5

Q ss_pred             HHHHHHHcCCCceeeCCCCCCCCCCcceeeecC-CCCCCCC-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccC-CC
Q 023909           89 LFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-SLSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSG-EL  165 (275)
Q Consensus        89 ~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~-~fd~~~~-i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~-~~  165 (275)
                      ++|+++..|++++....   ...++.+++|+|+ +||+.+| |++++++.|||+++|+++++++||+||||+++.+. ..
T Consensus      2597 ~~W~~~~~~~~~i~~p~---~~~~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~ 2673 (3089)
T 3zen_D         2597 SDWEVTRKAGTEIRVPR---KTKLSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWV 2673 (3089)
T ss_dssp             CCEEEEECTTCEEEEEE---EECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHS
T ss_pred             cceeeeecCCCCcCCCC---cCCccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhccc
Confidence            34444444444443222   1235788999995 6999999 99999999999999999999999999999976542 24


Q ss_pred             CCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH-hCCCCcccccchhhhHHHHHHHHHHH
Q 023909          166 DKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD-LGWTGPSYSISTACASSNYSILNATS  244 (275)
Q Consensus       166 ~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-~~l~Gp~~~v~taCsS~l~Al~~A~~  244 (275)
                      ++.++|||+|++.+++....+.+..+..+....++ .++..+.+.+++++++. ||++||+++|++||+||++||++||+
T Consensus      2674 ~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~ 2752 (3089)
T 3zen_D         2674 HPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVD 2752 (3089)
T ss_dssp             CGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHH
T ss_pred             CcceeEEEEeecCccHHHHHHHHHHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHH
Confidence            67999999999999998888777766434444333 45677889999999974 59999999999999999999999999


Q ss_pred             HHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          245 HIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       245 ~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|++|+||+|||||+|. ++|..+.+|.++
T Consensus      2753 ~IrsG~~d~aLaGGve~-ls~~~~~~f~~~ 2781 (3089)
T 3zen_D         2753 KIKLGKADLVIAGGFDD-LTLEAIIGFGDM 2781 (3089)
T ss_dssp             HHHTTSCSEEEEEEEEC-CCHHHHHHHHHH
T ss_pred             HHHCCCCCeeEEeeecc-cCHHHHHHHHHh
Confidence            99999999999999999 899999999865

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.60  E-value=2.7e-15  Score=138.08  Aligned_cols=91  Identities=21%  Similarity=0.249  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ++|+++++++||+|||++++++   +    +|++|+..+++.                         ...++.++++.+|
T Consensus        31 ~~L~~~a~~~Al~dAGl~~~~i---d----~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg   78 (397)
T 1wl4_A           31 QDLGSTVIKEVLKRATVAPEDV---S----EVIFGHVLAAGC-------------------------GQNPVRQASVGAG   78 (397)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGC---C----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHC---C----EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence            6799999999999999986543   2    589988654321                         1347889999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +  +||+++|+++|+|+++||++|+++|++|++|++||||+|.+.
T Consensus        79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s  123 (397)
T 1wl4_A           79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS  123 (397)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEST
T ss_pred             CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecC
Confidence            9  899999999999999999999999999999999999999754

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.60  E-value=2.4e-15  Score=137.22  Aligned_cols=160  Identities=15%  Similarity=0.075  Sum_probs=113.0

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCC-----CCCCCCcceee-ecCCCCCCCC-CCHHHHhhC----
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGF-----DCSEFPTRIAA-EIKSLSTGGW-ISPKIAKKA----  137 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~-----~~~~~~~~~~g-~i~~fd~~~~-i~~~~~~~~----  137 (275)
                      ..|.|+|+|+..|.. .+.+++|+.+....+.-.+..+|     ...++..+... .--.||+.+| ++..+...+    
T Consensus        12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (374)
T 2h84_A           12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQF   91 (374)
T ss_dssp             CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHHH
T ss_pred             CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHHH
Confidence            368999999999997 68899999875421100000000     00111111100 0013566666 555555555    


Q ss_pred             -CHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH
Q 023909          138 -DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA  216 (275)
Q Consensus       138 -d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  216 (275)
                       ++...|+++++++||++||+++++++       +|++|+..+                     +.    . ...+.+|+
T Consensus        92 ~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~~----~-p~~a~~v~  138 (374)
T 2h84_A           92 KKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------II----I-PDVNFKLI  138 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------CC----S-SCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC----C-CcHHHHHH
Confidence             88999999999999999999865432       577887531                     01    1 13678999


Q ss_pred             HHhCCCC--cccccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          217 MDLGWTG--PSYSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       217 ~~~~l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ..||+++  |++.|+ ++|+|+++||++|+++|++|.+|.|||+|+|.+
T Consensus       139 ~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~  187 (374)
T 2h84_A          139 DLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC  187 (374)
T ss_dssp             HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECC
T ss_pred             HHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEec
Confidence            9999998  899996 899999999999999999999999999999984

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.59  E-value=4.6e-16  Score=140.16  Aligned_cols=146  Identities=18%  Similarity=0.228  Sum_probs=105.7

Q ss_pred             CCCCCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHH
Q 023909           66 EPKERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYA  144 (275)
Q Consensus        66 ~~~~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~  144 (275)
                      .+.+++|.|+|+|+.+|.. .+.+++|+.+...       +.|-.    .+. | |   ....+.     ...++..+|+
T Consensus         6 ~~~~~~~~I~gig~~~P~~~~~~~~~~~~~~~~-------~~~i~----~~~-G-i---~~R~~~-----~~~~~~~~la   64 (339)
T 1mzj_A            6 VPERRFSRVLGVGSYRPRREVSNKEVCTWIDST-------EEWIE----TRT-G-I---RSRRIA-----EPDETIQVMG   64 (339)
T ss_dssp             CCCCCEEEEEEEEEECCSCEEEHHHHTTTSSCC-------HHHHH----HHH-C-C---SEEECC-----CTTCCHHHHH
T ss_pred             cCccCceEEEEEEEeCCCccccHHHHHHHhCCC-------HHHHH----Hhc-C-c---eEEEEe-----CCCCCHHHHH
Confidence            3456789999999999997 6778887654211       00100    000 0 0   000000     0124578999


Q ss_pred             HHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-C
Q 023909          145 LVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-G  223 (275)
Q Consensus       145 l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-G  223 (275)
                      ++++++||++||+++++++       +|++|+..+++                        ..+ ..+.+++..||++ +
T Consensus        65 ~~Aa~~al~~ag~~~~~id-------~vi~gt~~~~~------------------------~~p-~~a~~v~~~lgl~~~  112 (339)
T 1mzj_A           65 VAASRRALEHAGVDPAEID-------LVVVSTMTNFV------------------------HTP-PLSVAIAHELGADNA  112 (339)
T ss_dssp             HHHHHHHHHHHTCCGGGCC-------EEEEECSCCCC------------------------CSS-CHHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC------------------------CCC-hHHHHHHHHhCCCCc
Confidence            9999999999999865432       68999865431                        011 2678999999998 7


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCCh
Q 023909          224 PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP  265 (275)
Q Consensus       224 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p  265 (275)
                      |+++|+++|+|+++||++|+++|++|++|.+||+|+|. +++
T Consensus       113 ~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~-~s~  153 (339)
T 1mzj_A          113 GGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER-MTD  153 (339)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE-GGG
T ss_pred             cEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcc-ccc
Confidence            99999999999999999999999999999999999998 454

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.58  E-value=5.1e-15  Score=135.94  Aligned_cols=92  Identities=20%  Similarity=0.199  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          140 YLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dA-G~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      .++|+++++++||+|| |+++++++       +|++|+..+++.                        ..+.++.+|++.
T Consensus        30 ~~~L~~~a~~~AL~dA~gl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~ia~~   78 (390)
T 1wdk_C           30 AEDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTLE------------------------QGWNIARMASLM   78 (390)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence            4679999999999999 99854321       799998654321                        124678999999


Q ss_pred             hCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ||+  +||+++|+++|+|+++||++|+++|++|++|++||||+|.+
T Consensus        79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~  124 (390)
T 1wdk_C           79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM  124 (390)
T ss_dssp             SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEET
T ss_pred             cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeecc
Confidence            999  99999999999999999999999999999999999999974

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.55  E-value=1.5e-14  Score=132.97  Aligned_cols=90  Identities=23%  Similarity=0.396  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ++|+++++++||+|||++++++   +    ++++|+..++.                         ....++.++++.+|
T Consensus        33 ~~l~~~a~~~Al~dAgl~~~~i---d----~~~~g~~~~~~-------------------------~~~~~a~~va~~lg   80 (395)
T 2ib8_A           33 TKLGSIAIQGAIEKAGIPKEEV---K----EAYMGNVLQGG-------------------------EGQAPTRQAVLGAG   80 (395)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGC---C----EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHC---C----EEEEEeccCCC-------------------------CCchHHHHHHHHcC
Confidence            6799999999999999986543   2    57787754321                         12346889999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +  +||+++|+++|+|+++||++|+++|++|+||++||||+|..
T Consensus        81 l~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~  124 (395)
T 2ib8_A           81 LPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESM  124 (395)
T ss_dssp             CCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred             CCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecc
Confidence            9  89999999999999999999999999999999999999973

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.55  E-value=1.4e-14  Score=133.11  Aligned_cols=91  Identities=20%  Similarity=0.307  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..+|+++++++||+|||++++++   +    ++++|+..+...                         ...++.++++.+
T Consensus        27 ~~~L~~~a~~~Al~dAgl~~~~i---d----~~~~g~~~~~~~-------------------------~~~~a~~ia~~l   74 (392)
T 2vu1_A           27 AHELGATVISAVLERAGVAAGEV---N----EVILGQVLPAGE-------------------------GQNPARQAAMKA   74 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGC---C----EEEEECSCCTTS-------------------------CSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHC---C----EEEEEecCCCCC-------------------------CcHHHHHHHHHc
Confidence            36799999999999999986543   2    577776543210                         134789999999


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |++  ||+++|+++|+|+++||++|+++|++|++|++||||+|.+
T Consensus        75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~  119 (392)
T 2vu1_A           75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESM  119 (392)
T ss_dssp             TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEES
T ss_pred             CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEecc
Confidence            999  9999999999999999999999999999999999999974

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.55  E-value=1.3e-14  Score=135.31  Aligned_cols=92  Identities=13%  Similarity=0.171  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      .+|+++++++||+|||++++++   +    +|++|+..+++.                        ..+.++.++++.+|
T Consensus        56 ~~La~~Aa~~AL~dAGl~~~~I---d----~vi~g~~~~~~~------------------------~~~~~a~~va~~lG  104 (442)
T 2wu9_A           56 DDLLAPVLRALIEKTNLNPSEV---G----DIVVGTVLAPGS------------------------QRASECRMAAFYAG  104 (442)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGC---C----CEEEECCSSBHH------------------------HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHC---C----EEEEEeecCccC------------------------CCChHHHHHHHHcC
Confidence            5799999999999999986543   2    589998654321                        12457889999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +  ++|+++|+++|+|+++||++|+++|++|++|++||||+|.+.
T Consensus       105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s  149 (442)
T 2wu9_A          105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT  149 (442)
T ss_dssp             CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETT
T ss_pred             CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecC
Confidence            9  899999999999999999999999999999999999999743

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.52  E-value=6.3e-15  Score=131.37  Aligned_cols=138  Identities=19%  Similarity=0.224  Sum_probs=100.2

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++.|+|+|...|.. .+.+++++.+......+.  ++   .++..+.           +     ....++..+|++++++
T Consensus         2 ~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~Gi~~r~-----------~-----~~~~~~~~~l~~~a~~   60 (317)
T 1hnj_A            2 YTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIV--TR---TGIRERH-----------I-----AAPNETVSTMGFEAAT   60 (317)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HH---HCCCEEE-----------E-----CCTTCCHHHHHHHHHH
T ss_pred             CcEEEEEEEeCCCceecHHHHHHHhCCCHHHHH--HH---hCceEEE-----------e-----cCCCCCHHHHHHHHHH
Confidence            57899999999986 577777754321000000  00   0011111           0     0123567899999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp~~~v  228 (275)
                      +||++||+++++++       +|++|+..+++                         ....++.++++.+|++ +|+++|
T Consensus        61 ~al~~ag~~~~~id-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~v  108 (317)
T 1hnj_A           61 RAIEMAGIEKDQIG-------LIVVATTSATH-------------------------AFPSAACQIQSMLGIKGCPAFDV  108 (317)
T ss_dssp             HHHHHHTCCGGGCC-------EEEEECSCCSC-------------------------SSSCHHHHHHHHHTCCSSCEEEE
T ss_pred             HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCCeEEee
Confidence            99999999865432       68888764221                         1124789999999998 999999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +++|+|+++||++|+++|++|++|.+||+|+|.
T Consensus       109 ~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~  141 (317)
T 1hnj_A          109 AAACAGFTYALSVADQYVKSGAVKYALVVGSDV  141 (317)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CcccHHHHHHHHHHHHHHHCCCCCEEEEEEech
Confidence            999999999999999999999999999999997

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.51  E-value=8e-15  Score=148.90  Aligned_cols=161  Identities=14%  Similarity=0.009  Sum_probs=112.8

Q ss_pred             CCCCcEEEEeccccCCCC-------------CCHHHHHHHH------HcCCCceeeCCCCCCCCCCcceeeecCCCCCCC
Q 023909           67 PKERRIVVTGLGAVTPLG-------------DDAHLFHTSL------LEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG  127 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g-------------~~~~~~w~~l------~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~  127 (275)
                      +.+.++.|+|+|..+|.+             .+.+++|+.+      ..++++|++...++...+........+.+++  
T Consensus       599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~--  676 (979)
T 3tsy_A          599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAP--  676 (979)
T ss_dssp             SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSC--
T ss_pred             cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCC--
Confidence            345689999999999998             4455556555      4566777665433322211110000011111  


Q ss_pred             CCCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCccccccc
Q 023909          128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSL  207 (275)
Q Consensus       128 ~i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (275)
                      .+..++.+..+....|+++|+++||++||+++++++       .|+++++.+                          ..
T Consensus       677 ~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~~--------------------------~~  723 (979)
T 3tsy_A          677 SLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTSG--------------------------VE  723 (979)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeCC--------------------------CC
Confidence            134455555666788999999999999999975532       367776321                          11


Q ss_pred             chHHHHHHHHHhCCCCcc---cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          208 TNMASAVLAMDLGWTGPS---YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       208 ~~~~a~~ia~~~~l~Gp~---~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ....+..|+..||++++.   +.+++||+|+++||..|+++|++|.+|.|||+|+|..
T Consensus       724 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~  781 (979)
T 3tsy_A          724 MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEIT  781 (979)
T ss_dssp             SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECT
T ss_pred             CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEec
Confidence            125688999999999755   9999999999999999999999999999999999974

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.50  E-value=1.8e-14  Score=131.84  Aligned_cols=157  Identities=14%  Similarity=0.035  Sum_probs=110.4

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCC-----CCCCCCcce-eeecCCCCCCCCCCHHHHhhCCHHHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGF-----DCSEFPTRI-AAEIKSLSTGGWISPKIAKKADKYLIYA  144 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~-----~~~~~~~~~-~g~i~~fd~~~~i~~~~~~~~d~~~rl~  144 (275)
                      +.|+|+|...|.. .+.+++|+.+......... .+|     ...++..+. ....+.|+..+-+++++....++...|+
T Consensus        10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la   88 (382)
T 1u0m_A           10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV   88 (382)
T ss_dssp             CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence            7899999999986 7889999887543100000 000     011111111 1111124322226677777778889999


Q ss_pred             HHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-
Q 023909          145 LVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-  223 (275)
Q Consensus       145 l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-  223 (275)
                      ++++++||++||+++++++       .|++|+..+                     +.    . ...+.+|+..||+++ 
T Consensus        89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~~----~-p~~a~~v~~~lGl~~~  135 (382)
T 1u0m_A           89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------FM----M-PSLTAWLINEMGFDST  135 (382)
T ss_dssp             HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------CC----S-SCHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------CC----C-CcHHHHHHHHhCCCCC
Confidence            9999999999999865432       466666431                     11    1 136789999999998 


Q ss_pred             -ccccc-chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          224 -PSYSI-STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       224 -p~~~v-~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                       |++.| +++|+|+++||++|+++|++|.+|.|||+|+|.+
T Consensus       136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~  176 (382)
T 1u0m_A          136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC  176 (382)
T ss_dssp             CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG
T ss_pred             cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc
Confidence             89999 9999999999999999999999999999999973

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.50  E-value=7.2e-15  Score=131.91  Aligned_cols=141  Identities=21%  Similarity=0.256  Sum_probs=102.9

Q ss_pred             CCCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHH-hhCCHHHHHHH
Q 023909           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIA-KKADKYLIYAL  145 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~-~~~d~~~rl~l  145 (275)
                      .|.++.|+|+|...|.. .+.+++|+.+...       +.|...    +. |          |..+.. ...++..+|++
T Consensus         9 ~m~~~~I~g~g~~~P~~~~~~~~~~~~~~~~-------~~~i~~----~~-g----------i~~r~~~~~~~~~~~la~   66 (335)
T 1u6e_A            9 GARSVGLLSVGAYRPERVVTNDEICQHIDSS-------DEWIYT----RT-G----------IKTRRFAADDESAASMAT   66 (335)
T ss_dssp             CCSCEEEEEEEEECCSEEEEHHHHTTSSSCC-------HHHHHH----HH-C----------CSEEEECCTTCCHHHHHH
T ss_pred             CCCceEEEEEEEECCCceecHHHHHHHhCCC-------HHHHHH----hc-C----------CceEeecCCCCCHHHHHH
Confidence            46689999999999986 6778877643211       011000    00 0          111110 01245788999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cc
Q 023909          146 VAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GP  224 (275)
Q Consensus       146 ~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp  224 (275)
                      +++++||+|||+++++++       +|++|+..+++.                         ....+.+++..||++ +|
T Consensus        67 ~A~~~al~~ag~~~~~id-------~vi~~t~~~~~~-------------------------~~~~a~~v~~~lgl~~~~  114 (335)
T 1u6e_A           67 EACRRALSNAGLSAADID-------GVIVTTNTHFLQ-------------------------TPPAAPMVAASLGAKGIL  114 (335)
T ss_dssp             HHHHHHHHHHTCCGGGCC-------EEEEECSCCCCS-------------------------SSCHHHHHHHHHTCTTSE
T ss_pred             HHHHHHHHHcCCCHHHCC-------EEEEEcCCCCCC-------------------------CChHHHHHHHHhCCCCCc
Confidence            999999999999865432       789998654221                         113688999999998 69


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++.|+++|+|+++||++|+++|++|++|.+||+|+|.+
T Consensus       115 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~  152 (335)
T 1u6e_A          115 GFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKL  152 (335)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEEC
T ss_pred             EeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccc
Confidence            99999999999999999999999999999999999974

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.50  E-value=1.7e-14  Score=128.02  Aligned_cols=137  Identities=18%  Similarity=0.201  Sum_probs=99.8

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++.|+|+|...|.. .+.+++++.+......+.  .+   .++..+.           +..+      ++..+|++++++
T Consensus         2 ~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~Gi~~r~-----------~~~~------~~~~~l~~~a~~   59 (309)
T 2ebd_A            2 GTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWIT--TR---TGIKERR-----------IAKE------ETITYMATQAAK   59 (309)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HH---HCCCEEE-----------ECSS------CCHHHHHHHHHH
T ss_pred             ceEEEEEEEECCCceEcHHHHHHHcCCCHHHHH--HH---hCceeee-----------ecCC------CCHHHHHHHHHH
Confidence            57899999999987 577777654311000000  00   0011010           0111      567899999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC-ccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG-PSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G-p~~~v  228 (275)
                      +||+|||+++++++       +|++|+..+++                        ..+ .++.+++..+|++| |+++|
T Consensus        60 ~al~~ag~~~~~id-------~v~~~~~~~~~------------------------~~~-~~a~~v~~~lgl~~~~~~~v  107 (309)
T 2ebd_A           60 EALREANLSPEELD-------LIILATLTPQK------------------------RFP-STACLVQAQLKAKGVYAFDI  107 (309)
T ss_dssp             HHHHHHTCCGGGCS-------EEEEECSSCSS------------------------SSS-CHHHHHHHHHTCTTCEEEEE
T ss_pred             HHHHHcCCCHHHCC-------EEEEEcCCCCC------------------------CCC-cHHHHHHHHhCCCCceEEec
Confidence            99999999865432       79999864321                        112 26889999999999 99999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +++|+|++.||++|+++|++|++|.+||+|+|.
T Consensus       108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~  140 (309)
T 2ebd_A          108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEK  140 (309)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CccchHHHHHHHHHHHHHHCCCCCEEEEEEecc
Confidence            999999999999999999999999999999997

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.47  E-value=2.2e-13  Score=125.24  Aligned_cols=92  Identities=26%  Similarity=0.435  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+++++++||+|||+++++++       +|++|+.....                         ....++.+++..+|
T Consensus        30 ~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~~-------------------------~~~~~a~~~~~~lG   77 (395)
T 4e1l_A           30 VQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQTG-------------------------LGQNVARQIAINAG   77 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCSS-------------------------TTCCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CcchHHHHHHHHcC
Confidence            56999999999999999976543       68888754221                         11246889999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      +  ++|+++|+++|+|+++||++|+++|++|++|.+||+|+|.+..
T Consensus        78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~  123 (395)
T 4e1l_A           78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ  123 (395)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred             CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccC
Confidence            9  6899999999999999999999999999999999999998554

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.47  E-value=2.5e-13  Score=124.84  Aligned_cols=91  Identities=22%  Similarity=0.372  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+++++++||+|||+++++++       +|++|+.....                         ....++.+++..+|
T Consensus        30 ~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~~-------------------------~~~~~a~~i~~~lG   77 (394)
T 3ss6_A           30 VELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQRT-------------------------DEANTARTAALAAG   77 (394)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCCG-------------------------GGCSHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCCC-------------------------ccchHHHHHHHHcC
Confidence            56999999999999999976543       68888754321                         12346788999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +  ++|+++|+++|+|+++||++|+++|++|++|.+||+|+|.+.
T Consensus        78 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s  122 (394)
T 3ss6_A           78 FPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMS  122 (394)
T ss_dssp             CCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECT
T ss_pred             CCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhcc
Confidence            9  689999999999999999999999999999999999999754

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.46  E-value=2.1e-13  Score=125.39  Aligned_cols=92  Identities=28%  Similarity=0.436  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+++++++||+|||+++++++       +|++|+..+++                         ....++.++++.+|
T Consensus        32 ~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~lG   79 (396)
T 4dd5_A           32 VELGVTAAKEAIKRANITPDMID-------ESLLGGVLTAG-------------------------LGQNIARQIALGAG   79 (396)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCCC-------------------------CCchHHHHHHHHcC
Confidence            56999999999999999976543       68898764321                         11346889999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      +  .+|+++|+++|+|+++||++|+++|++|++|.+||+|+|.+..
T Consensus        80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~  125 (396)
T 4dd5_A           80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSM  125 (396)
T ss_dssp             CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTT
T ss_pred             CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccC
Confidence            9  5899999999999999999999999999999999999997543

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.44  E-value=2.7e-13  Score=124.85  Aligned_cols=93  Identities=14%  Similarity=0.135  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      .+|+++++++||+|||+++++++       +|++|+..+++.                        ..+.++.++++.+|
T Consensus        27 ~~L~~~Aa~~Al~dAgl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~va~~lG   75 (401)
T 1ulq_A           27 DDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAGE------------------------DNRNVARMALLLAG   75 (401)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSST------------------------TTTTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC------------------------CCChHHHHHHHHhC
Confidence            56999999999999999865432       799998654321                        12457899999999


Q ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          221 W--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       221 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      +  ++|+++|+++|+|+++||++|+++|++|++|++||||+|.+..
T Consensus        76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~  121 (401)
T 1ulq_A           76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR  121 (401)
T ss_dssp             CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred             CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCC
Confidence            9  7999999999999999999999999999999999999997543

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.41  E-value=6.2e-13  Score=122.17  Aligned_cols=90  Identities=14%  Similarity=0.125  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHHcC----CCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHH
Q 023909          141 LIYALVAGKKALVDAG----ITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLA  216 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG----~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  216 (275)
                      .+|+++++++||+|||    ++++++   +    +|++|+..+++                         ..+.++.+++
T Consensus        36 ~~La~~Aa~~Al~~Ag~~~~l~~~~i---d----~v~~g~~~~~~-------------------------~~~~~a~~va   83 (393)
T 1afw_A           36 DYLLYNFLNEFIGRFPEPLRADLNLI---E----EVACGNVLNVG-------------------------AGATEHRAAC   83 (393)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHTCGGGC---C----CEEEECSSSBG-------------------------GGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCHHHC---C----EEEEEecCCCC-------------------------CCChHHHHHH
Confidence            5699999999999999    986543   2    58999865432                         1356789999


Q ss_pred             HHhCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          217 MDLGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       217 ~~~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.+|+  +||+++|+++|+|+++||++|+++|++|++|++||||+|.+
T Consensus        84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~  131 (393)
T 1afw_A           84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESM  131 (393)
T ss_dssp             HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred             HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEec
Confidence            99999  89999999999999999999999999999999999999973

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.41  E-value=6.6e-13  Score=122.92  Aligned_cols=93  Identities=15%  Similarity=0.186  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..+|+++++++||+|||+++++++       +||+|+..+++.                         ....+..+++.+
T Consensus        55 ~~~L~~~Aa~~AL~dAgl~~~~id-------~v~~g~~~~~~~-------------------------~~~~a~~~a~~l  102 (418)
T 2iik_A           55 PDELLSAVMTAVLKDVNLRPEQLG-------DICVGNVLQPGA-------------------------GAIMARIAQFLS  102 (418)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECSSSBGG-------------------------GHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCccc-------------------------cccHHHHHHHHc
Confidence            367999999999999999865432       689998654321                         134566788999


Q ss_pred             CC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          220 GW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       220 ~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      |+  ++|+++|+++|+|+++||++|+++|++|++|++||||+|.+..
T Consensus       103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~  149 (418)
T 2iik_A          103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL  149 (418)
T ss_dssp             TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred             CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCcc
Confidence            99  8999999999999999999999999999999999999998543

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.41  E-value=2.5e-13  Score=121.84  Aligned_cols=138  Identities=23%  Similarity=0.237  Sum_probs=100.1

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      ++.|+|+|...|.. .+.+++|+.+......|.  .+.   ++..+.           +..+      ++..+|++++++
T Consensus         5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~~---Gi~~R~-----------~~~~------~~~~~la~~Aa~   62 (331)
T 2x3e_A            5 AAVVCGLGSYLPEAVLSNDMLAAELDTSDAWIS--SRT---GVRQRH-----------IAGD------LGSGDLALRAAS   62 (331)
T ss_dssp             EEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHH--HHH---CCCEEE-----------CCTT------CCHHHHHHHHHH
T ss_pred             eeEEEEEEEECCCcEecHHHHHHHhCCCHHHHH--Hhh---CceEEE-----------ecCC------CCHHHHHHHHHH
Confidence            68999999999987 678888876532110000  000   001000           1111      567899999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Cccccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYSI  228 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp~~~v  228 (275)
                      +||++||+  ++++       .|++|+..+++                        ..+ ..+.+++..||++ +|++.|
T Consensus        63 ~al~~ag~--~~id-------~vi~~t~~~~~------------------------~~p-~~a~~v~~~lgl~~~~~~~v  108 (331)
T 2x3e_A           63 AALASAGL--ERVD-------AVVLATSTGDF------------------------CCP-ATAPRVAARLGLVGALAFDL  108 (331)
T ss_dssp             HHHHHHTC--SCCS-------EEEEECSSCSE------------------------EES-CSHHHHHHHTTCTTSEEEEE
T ss_pred             HHHHhCCc--ccCC-------EEEEEeCCCCC------------------------CCC-hHHHHHHHHhCCCCCcEEEE
Confidence            99999998  2221       57888764321                        011 2578999999998 899999


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCCh
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP  265 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p  265 (275)
                      +++|+|+++||++|+++|++|++|.+||+|+|. +++
T Consensus       109 ~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~  144 (331)
T 2x3e_A          109 SAAATGFVYGLASVGSLISAGLADSALLVGVDT-FSH  144 (331)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGG
T ss_pred             cCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec-ccc
Confidence            999999999999999999999999999999998 454

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.39  E-value=1.3e-12  Score=119.75  Aligned_cols=94  Identities=18%  Similarity=0.187  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          140 YLIYALVAGKKALVDA-GITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dA-G~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      .+.|+++++++||+|| |+++++++       +|++|+...+.                        .....++.+++..
T Consensus        27 ~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~------------------------~~~~~~a~~~~~~   75 (387)
T 3goa_A           27 AEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTL------------------------EQGFNIARNAALL   75 (387)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSB------------------------TTTTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCc------------------------ccccHHHHHHHHH
Confidence            4679999999999999 99976543       68998764321                        1123467899999


Q ss_pred             hCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       219 ~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      +|+  .+|+++|+++|+|+++||++|+++|++|++|.+||+|+|.+..
T Consensus        76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~  123 (387)
T 3goa_A           76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGH  123 (387)
T ss_dssp             TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTT
T ss_pred             cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCC
Confidence            999  6899999999999999999999999999999999999997543

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.38  E-value=1.9e-12  Score=116.81  Aligned_cols=145  Identities=18%  Similarity=0.200  Sum_probs=103.0

Q ss_pred             CCCCcEEEEeccccCCCC-CCHHHHHHHHHc-----CCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHH
Q 023909           67 PKERRIVVTGLGAVTPLG-DDAHLFHTSLLE-----GVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKY  140 (275)
Q Consensus        67 ~~~~~VaItG~g~~~p~g-~~~~~~w~~l~~-----g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~  140 (275)
                      |..+.|.|+|+|...|.- .+.+++.+.+..     +.+. ..+.  ...++..+..     .++.           ...
T Consensus         8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~-~~i~--~~tGi~~R~~-----~~~~-----------~~~   68 (345)
T 3s21_A            8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT-DVLG--DVAGIHARRL-----WDQD-----------VQA   68 (345)
T ss_dssp             GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC-CHHH--HTTCCSEEEE-----CSSC-----------CCH
T ss_pred             ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH-HHHH--HhhCceeEEE-----CCCC-----------CCH
Confidence            456789999999999986 678888776532     2110 0000  0011111110     0110           124


Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++++||++||+++++++       .|++|+...++                         .....+.+|+..+|
T Consensus        69 ~~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~lG  116 (345)
T 3s21_A           69 SDAATQAARKALIDANIGIEKIG-------LLINTSVSRDY-------------------------LEPSTASIVSGNLG  116 (345)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCCSC-------------------------SSSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCChHHHHHHHHhC
Confidence            67999999999999999976533       57888754221                         11245789999999


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++  +|++.|+++|+|+++||+.|+++|++|++|.|||+|+|.+
T Consensus       117 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  160 (345)
T 3s21_A          117 VSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETA  160 (345)
T ss_dssp             CCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             CCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence            95  7999999999999999999999999999999999999995

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.38  E-value=7.1e-13  Score=119.08  Aligned_cols=142  Identities=20%  Similarity=0.265  Sum_probs=102.5

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCC--CCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCS--EFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVA  147 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~--~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~a  147 (275)
                      +|.|+|+|...|.- .+.+++|+.+....  +...+.|-..  ++..+..  .         .+     -.+...|+.++
T Consensus        11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~i~~rtgi~~r~~--~---------~~-----~~~~~~la~~A   72 (333)
T 4dfe_A           11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEWIVARTGIHARYF--A---------EP-----DVTTSDLAFIA   72 (333)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHHHHHCCSEEEE--C---------CT-----TCCHHHHHHHH
T ss_pred             ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHHhHHhcCceEEEE--c---------CC-----CCCHHHHHHHH
Confidence            79999999999995 79999999874411  1100001000  0111110  0         00     12357899999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC--CCcc
Q 023909          148 GKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW--TGPS  225 (275)
Q Consensus       148 a~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l--~Gp~  225 (275)
                      +++||++||+++++++       .|++|+..+++.                         ....+.+++..+|+  ++|+
T Consensus        73 a~~al~~ag~~~~~Id-------~vi~~t~~~~~~-------------------------~p~~a~~v~~~lgl~~~~~~  120 (333)
T 4dfe_A           73 SQRAIEAADIDPQSID-------LIIVATSTPDFV-------------------------FPSTACLLQNKLGIRNHGAA  120 (333)
T ss_dssp             HHHHHHHHTCCGGGCC-------EEEEECSSCSSS-------------------------BSCHHHHHHHHTTCCSCCEE
T ss_pred             HHHHHHHcCCCHHHCC-------EEEEEeCCCCCC-------------------------CCcHHHHHHHHhCCCCCCcE
Confidence            9999999999876532       588887643221                         12358899999999  7899


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          226 YSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +.|+++|+|+++||+.|+++|++|.+|.+||+|+|.+
T Consensus       121 ~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  157 (333)
T 4dfe_A          121 FDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETF  157 (333)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred             EEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecc
Confidence            9999999999999999999999999999999999984

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.37  E-value=1.1e-12  Score=117.15  Aligned_cols=140  Identities=16%  Similarity=0.137  Sum_probs=99.3

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~  150 (275)
                      +.|+|+|...|.. .+.+++++.+......+.  .+   .++..+.           +..     .-++..+|+++++++
T Consensus         2 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~--~~---~Gi~~r~-----------~~~-----~~~~~~~la~~a~~~   60 (322)
T 1ub7_A            2 SGILALGAYVPERVMTNADFEAYLDTSDEWIV--TR---TGIKERR-----------VAA-----EDEYTSDLAFKAVED   60 (322)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHH--HH---TCCCEEE-----------ECC-----TTCCHHHHHHHHHHH
T ss_pred             cEEEEEEEECCCceecHHHHHHHhCCCHHHHH--Hh---cCceEEe-----------ecC-----CCCCHHHHHHHHHHH
Confidence            4799999999986 677777754321100000  00   0111111           000     124568899999999


Q ss_pred             HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCCcccccch
Q 023909          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSIST  230 (275)
Q Consensus       151 Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v~t  230 (275)
                      ||+|||+++++++       +|++|+...++                        ..+ ..+.+++..+|+++|+++|++
T Consensus        61 al~~ag~~~~~id-------~vi~~~~~~~~------------------------~~~-~~a~~v~~~lgl~~~~~~v~~  108 (322)
T 1ub7_A           61 LLRRHPGALEGVD-------AVIVATNTPDA------------------------LFP-DTAALVQARFGLKAFAYDLLA  108 (322)
T ss_dssp             HHHHSTTTTTTEE-------EEEEECSSCSE------------------------EES-CHHHHHHHHTTCCCEEEEEEC
T ss_pred             HHHHcCCCHHHCC-------EEEEEcCCCCC------------------------CCC-cHHHHHHHHhCCCCEEEeeCc
Confidence            9999999854321       58888764211                        111 368899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCCh
Q 023909          231 ACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP  265 (275)
Q Consensus       231 aCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p  265 (275)
                      +|+|++.||++|+++|++|++|.+||+|+|. +++
T Consensus       109 aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~  142 (322)
T 1ub7_A          109 GCPGWIYALAQAHALVEAGLAQKVLAVGAEA-LSK  142 (322)
T ss_dssp             STTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGG
T ss_pred             cchHHHHHHHHHHHHHHcCCCCEEEEEEech-hcc
Confidence            9999999999999999999999999999998 454

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.31  E-value=4.5e-12  Score=112.51  Aligned_cols=92  Identities=27%  Similarity=0.350  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      +..+|+++++++||++||+++++++       +|++|+..+++.                        .+ ..+.+++..
T Consensus        50 ~~~~l~~~a~~~al~~ag~~~~~id-------~vi~~~~~~~~~------------------------~~-~~a~~v~~~   97 (313)
T 1zow_A           50 DTSDLAYEASVKAIADAGIQPEDID-------MIIVATATGDMP------------------------FP-TVANMLQER   97 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSCS------------------------SS-CHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCCC------------------------CC-cHHHHHHHH
Confidence            4678999999999999999865432       689988653210                        11 357899999


Q ss_pred             hCCC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|++ +|+++|+++|+|++.||++|+++|++|++|.+||+|+|.+
T Consensus        98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~  142 (313)
T 1zow_A           98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKL  142 (313)
T ss_dssp             HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEG
T ss_pred             hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence            9998 6999999999999999999999999999999999999973

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.22  E-value=7.8e-12  Score=115.33  Aligned_cols=93  Identities=17%  Similarity=0.182  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHH-cCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          140 YLIYALVAGKKALVD-AGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~d-AG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ...|+++++++||+| ||+++++++       +|++|+.....                        .....++.++++.
T Consensus        32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~~------------------------~~~~~~a~~va~~   80 (407)
T 3svk_A           32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPVG------------------------DQGGDIARTAVLA   80 (407)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCccc------------------------cccCcHHHHHHHH
Confidence            366999999999999 999976543       68888753211                        0113467899999


Q ss_pred             hCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          219 LGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       219 ~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +|+  ++|+++|+++|+|+++||+.|+++|++|++|.+||+|+|.+.
T Consensus        81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s  127 (407)
T 3svk_A           81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMS  127 (407)
T ss_dssp             TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-
T ss_pred             cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccc
Confidence            999  789999999999999999999999999999999999999854

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.21  E-value=3.4e-11  Score=111.26  Aligned_cols=100  Identities=18%  Similarity=0.039  Sum_probs=81.6

Q ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 023909          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (275)
Q Consensus       130 ~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
                      ..+....++....|+.+++.+||+++|+++++++       .|++|+..+                     .    .. .
T Consensus       115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~---------------------~----~~-p  161 (413)
T 1xes_A          115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT---------------------P----DL-P  161 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC---------------------C----EE-S
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------C----cc-c
Confidence            3455556678889999999999999999865432       477787532                     0    11 2


Q ss_pred             HHHHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          210 MASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       210 ~~a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ..+.+|+..+|++++   ++.|+++|+|+++||..|+++|++|.+|.|||+|+|.+
T Consensus       162 ~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~  217 (413)
T 1xes_A          162 GADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETT  217 (413)
T ss_dssp             CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECT
T ss_pred             hHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhh
Confidence            357899999999885   78999999999999999999999999999999999973

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.18  E-value=5.8e-11  Score=108.94  Aligned_cols=92  Identities=17%  Similarity=0.244  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ....|+.+|+++||++||+++++++       .|++|+...++                        ..+ ..+.+|+..
T Consensus       116 ~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~~------------------------~~p-~~a~~v~~~  163 (392)
T 3led_A          116 ILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQR------------------------AYP-AMAIEVQNA  163 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCSC------------------------SBS-CHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC------------------------Ccc-HHHHHHHHH
Confidence            4578999999999999999865432       47777654321                        112 367889999


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|++.|++.|+.+|+|+++||..|+++|++|.++.|||+|+|.+
T Consensus       164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~  207 (392)
T 3led_A          164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEIC  207 (392)
T ss_dssp             TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred             hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhc
Confidence            99999999999999999999999999999999999999999973

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.18  E-value=1.1e-10  Score=106.97  Aligned_cols=92  Identities=14%  Similarity=0.140  Sum_probs=74.4

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 023909          138 DKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (275)
Q Consensus       138 d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (275)
                      .....|+++++++||++||+++++++       .|++|+..+ +                    .    . ...+.+|+.
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~-~--------------------~----~-p~~a~~v~~  157 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG-F--------------------I----A-PGVDVAIVK  157 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC-C--------------------C----S-SCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC-C--------------------c----c-ChHHHHHHH
Confidence            45678999999999999999854321       456676532 0                    0    1 236789999


Q ss_pred             HhCCCCc--cccc-chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          218 DLGWTGP--SYSI-STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       218 ~~~l~Gp--~~~v-~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .+|++++  ++.+ +++|+|+++||++|+++|++|.+|.+||+|+|.+
T Consensus       158 ~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~  205 (393)
T 1ted_A          158 ELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELC  205 (393)
T ss_dssp             HHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEC
T ss_pred             HcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEec
Confidence            9999986  5777 8999999999999999999999999999999984

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.15  E-value=8.1e-11  Score=107.79  Aligned_cols=107  Identities=12%  Similarity=-0.020  Sum_probs=86.7

Q ss_pred             CCCCCC-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCc
Q 023909          123 LSTGGW-ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPF  201 (275)
Q Consensus       123 fd~~~~-i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (275)
                      ||..+. +..++...+.....|+.+++.+||+++|+++++++       .|++++..+ +                    
T Consensus        80 ~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~-~--------------------  131 (387)
T 3a5r_A           80 AAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG-V--------------------  131 (387)
T ss_dssp             HSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC-C--------------------
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC-C--------------------
Confidence            444444 66677777788899999999999999999865432       467776532 0                    


Q ss_pred             ccccccchHHHHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          202 YIPYSLTNMASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       202 ~~~~~~~~~~a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                           .....+.+|+..+|++++   .+.|+++|+|++.||..|+++|++|.++.|||+|+|.+
T Consensus       132 -----~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  190 (387)
T 3a5r_A          132 -----DMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMT  190 (387)
T ss_dssp             -----EESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECC
T ss_pred             -----CCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEecc
Confidence                 112368899999999886   78999999999999999999999999999999999973

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.10  E-value=4.2e-10  Score=103.08  Aligned_cols=101  Identities=15%  Similarity=0.077  Sum_probs=82.4

Q ss_pred             CCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccc
Q 023909          129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLT  208 (275)
Q Consensus       129 i~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (275)
                      +..+....++....|+.+|+.+||++||+++++++       .|++++..+ +                         ..
T Consensus        85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~-~-------------------------~~  131 (387)
T 3oit_A           85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG-A-------------------------HV  131 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC-C-------------------------EE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC-C-------------------------Cc
Confidence            34455556667889999999999999999876543       577877532 1                         11


Q ss_pred             hHHHHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          209 NMASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       209 ~~~a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ...+.+|+..+|+++.   .+.++.+|+++++||..|.++|++|.++.|||+|+|.+
T Consensus       132 p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~  188 (387)
T 3oit_A          132 PGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELT  188 (387)
T ss_dssp             SCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECG
T ss_pred             ccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEecc
Confidence            2467899999999874   68999999999999999999999999999999999985

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.09  E-value=1e-10  Score=107.43  Aligned_cols=100  Identities=17%  Similarity=0.042  Sum_probs=81.7

Q ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccch
Q 023909          130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTN  209 (275)
Q Consensus       130 ~~~~~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
                      ..+.....+....|+.+|+++||++||+++++++       .|++++..+ +                         ...
T Consensus        92 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~-~-------------------------~~p  138 (393)
T 3ov2_A           92 DDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG-I-------------------------DMP  138 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC-C-------------------------CBS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC-C-------------------------CCC
Confidence            3444555667889999999999999999876543       578877532 1                         112


Q ss_pred             HHHHHHHHHhCCCCc---ccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          210 MASAVLAMDLGWTGP---SYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       210 ~~a~~ia~~~~l~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ..+.+|+..+|+++.   ++.++.+|+++++||..|+++|++|.++.|||+|+|.+
T Consensus       139 ~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~  194 (393)
T 3ov2_A          139 GADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEIT  194 (393)
T ss_dssp             CHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECG
T ss_pred             CHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecc
Confidence            467899999999875   68999999999999999999999999999999999985

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=98.99  E-value=1.1e-09  Score=97.67  Aligned_cols=139  Identities=13%  Similarity=0.166  Sum_probs=98.5

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +.|.|+|+|...|.- .+.+++.+.+-.-..-|.  .+   .++..+.      +     ..+.+      ...|+.+++
T Consensus         3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~--~~---~Gi~~R~------~-----a~~~e------~~~La~~Aa   60 (321)
T 3il6_A            3 NYARISCTSRYVPENCVTNHQLSEMMDTSAAWIH--SR---TGISERR------I-----VTQEN------TSDLCHQVA   60 (321)
T ss_dssp             CEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHH--HH---HSCSEEE------C-----CSSCC------HHHHHHHHH
T ss_pred             CcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhh--hh---cCceEEE------E-----CCCCC------HHHHHHHHH
Confidence            468999999999995 677777665421100000  00   0111111      0     01111      567999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC-Ccccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT-GPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~-Gp~~~  227 (275)
                      ++||+++|+++++++       .|++|+...++                        .. ...+.+++..+|++ .|++.
T Consensus        61 ~~aL~~ag~~~~~Id-------~li~~t~~~~~------------------------~~-p~~a~~v~~~lGl~~~~~~~  108 (321)
T 3il6_A           61 KQLLEKSGKQASEID-------FILVATVTPDF------------------------NM-PSVACQVQGAIGATEAFAFD  108 (321)
T ss_dssp             HHHHHHHTCCGGGCC-------EEEEECSSCSC------------------------SS-SCHHHHHHHHTTCTTCEEEE
T ss_pred             HHHHHHcCCCHHHCC-------EEEEEeCCCCc------------------------CC-CcHHHHHHHHcCCCCceEEE
Confidence            999999999875532       57888754221                        11 13688999999997 68999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+.+|+|+++||..|+++|++|.++.+||+|+|.+
T Consensus       109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  143 (321)
T 3il6_A          109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETF  143 (321)
T ss_dssp             ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECG
T ss_pred             eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence            99999999999999999999999999999999984

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=98.98  E-value=1.3e-09  Score=98.55  Aligned_cols=91  Identities=18%  Similarity=0.152  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+++|+++++++       .|++|+..+++                         .....+.+++..+
T Consensus        66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~l  113 (354)
T 4efi_A           66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPNY-------------------------RLPATAFVLQAEL  113 (354)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC-------------------------SSSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCCcHHHHHHHHc
Confidence            356999999999999999976533       57888764321                         1123578999999


Q ss_pred             CC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+  +.|++.|+.+|+|++.||..|+++|++|.++.|||+|+|.+
T Consensus       114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  158 (354)
T 4efi_A          114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTI  158 (354)
T ss_dssp             TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG
T ss_pred             CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh
Confidence            99  47899999999999999999999999999999999999983

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=98.97  E-value=1.8e-09  Score=96.53  Aligned_cols=91  Identities=22%  Similarity=0.205  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++++||+++|+++++++       .|++|+..+++                        ..+ ..+.+++..+
T Consensus        58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~~------------------------~~p-~~a~~v~~~l  105 (323)
T 3il3_A           58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHSH------------------------AYP-SAACQVQGLL  105 (323)
T ss_dssp             HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCSC------------------------SSS-CHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC------------------------CCc-cHHHHHHHHh
Confidence            467999999999999999976533       57888754321                        112 2678899999


Q ss_pred             CCC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |++ .|++.|+.+|+|+++||..|+++|++|.++.+||+|+|.+
T Consensus       106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~  149 (323)
T 3il3_A          106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLN  149 (323)
T ss_dssp             TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred             CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecc
Confidence            995 6899999999999999999999999999999999999984

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=98.94  E-value=2.6e-09  Score=96.99  Aligned_cols=146  Identities=14%  Similarity=0.164  Sum_probs=99.9

Q ss_pred             CCCCCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHH
Q 023909           66 EPKERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYA  144 (275)
Q Consensus        66 ~~~~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~  144 (275)
                      .+..+.|.|+|+|...|.- .+.+++.+.+. +.+ ...+.  ...++..+..  .   +      +.     .....|+
T Consensus        25 ~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i~--~~tGI~~R~~--a---~------~~-----~~~~~La   84 (365)
T 3gwa_A           25 AAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKIL--AKTGIRERRI--A---A------PR-----ETAADLA   84 (365)
T ss_dssp             ----CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHHH--HHHCCCEEEE--C---C------TT-----CCHHHHH
T ss_pred             cceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHHH--HhcCccEEEE--C---C------CC-----CCHHHHH
Confidence            4456789999999999995 67777777551 110 00000  0001111110  0   0      00     1246799


Q ss_pred             HHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC--
Q 023909          145 LVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT--  222 (275)
Q Consensus       145 l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~--  222 (275)
                      .+++.+||+++|+++++++       .|++|+..+++                        ..+ ..+.+++..+|+.  
T Consensus        85 ~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~~------------------------~~p-~~a~~v~~~lGl~~~  132 (365)
T 3gwa_A           85 YEAARKLFAQGAVGADQVD-------FVILCTQAPDY------------------------VLP-TSACMLQHRLGIPTH  132 (365)
T ss_dssp             HHHHHHHHHTTSCCGGGCC-------EEEEEESSCSC------------------------SBS-CHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC------------------------CCC-cHHHHHHHHcCCCCC
Confidence            9999999999999976543       57888754321                        112 3578999999997  


Q ss_pred             CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          223 GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       223 Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      .|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.+.
T Consensus       133 ~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s  173 (365)
T 3gwa_A          133 AGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYS  173 (365)
T ss_dssp             SEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG
T ss_pred             ceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhh
Confidence            79999999999999999999999999999999999999843

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=98.93  E-value=4e-09  Score=95.59  Aligned_cols=90  Identities=14%  Similarity=0.154  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+++.+||+++|+++++++       .|++|+..+++                        ..+ ..+.+++..+|
T Consensus        75 ~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~~------------------------~~p-~~a~~v~~~lG  122 (359)
T 3h78_A           75 SALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPDH------------------------HDP-SQACLIQPLLG  122 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCSS------------------------SBS-CHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCCC------------------------CCC-cHHHHHHHHcC
Confidence            56999999999999999875533       57887754321                        112 35789999999


Q ss_pred             CC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++ .|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.+
T Consensus       123 l~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~  165 (359)
T 3h78_A          123 LRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVL  165 (359)
T ss_dssp             CCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEC
T ss_pred             CCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchh
Confidence            96 4899999999999999999999999999999999999984

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=98.89  E-value=1.1e-08  Score=95.46  Aligned_cols=138  Identities=12%  Similarity=0.060  Sum_probs=94.3

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|.|.|+|..+|.- .+.+++-+.+  |.+    .+++ ...+........         .+.     .....|+.+|+.
T Consensus         3 ~v~I~~ig~y~P~~~v~~~~l~~~~--g~~----~~~~-~~g~G~~~~~~~---------~~~-----e~~~~La~~Aa~   61 (450)
T 2f82_A            3 NVGILAMDIYFPPTCVQQEALEAHD--GAS----KGKY-TIGLGQDCLAFC---------TEL-----EDVISMSFNAVT   61 (450)
T ss_dssp             SCEEEEEEEECCSEEEEHHHHHHHT--TCC----TTTT-TTTSCCCEEECC---------CTT-----CCHHHHHHHHHH
T ss_pred             ceEEEEEEEECCCeeccHHHHHHHh--CCC----HHHh-hhhhCceeeeeC---------CCC-----CCHHHHHHHHHH
Confidence            58899999999985 5677766543  211    1111 111111111111         011     124579999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC----CCc
Q 023909          150 KALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW----TGP  224 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~g-v~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l----~Gp  224 (275)
                      +||+++|++++        +++ |++|+..+.+                         .....+..|+..||+    ..+
T Consensus        62 ~aL~~agi~~~--------~Id~li~~t~t~~~-------------------------~~p~~a~~v~~~lgl~g~~~~~  108 (450)
T 2f82_A           62 SLLEKYKIDPK--------QIGRLEVGSETVID-------------------------KSKSIKTFLMQLFEKCGNTDVE  108 (450)
T ss_dssp             HHHHHTTCCGG--------GEEEEEEECCCCSC-------------------------SSSCHHHHHTHHHHTTTCCCCB
T ss_pred             HHHHHcCcCHH--------HCCEEEEEecCCCC-------------------------CCCcHHHHHHHHhCCcCCCCce
Confidence            99999999854        344 4557653211                         112467888888888    468


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHcCCC--CEEEEeccCCC
Q 023909          225 SYSISTACASSNYSILNATSHIIKGDT--DIMLCGGSDGM  262 (275)
Q Consensus       225 ~~~v~taCsS~l~Al~~A~~~I~~G~~--d~alvGgvd~~  262 (275)
                      ++.|+++|+|++.||..|.++|++|.+  +.|||+|+|.+
T Consensus       109 ~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~  148 (450)
T 2f82_A          109 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSA  148 (450)
T ss_dssp             CCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEE
T ss_pred             EEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeec
Confidence            899999999999999999999999998  99999999973

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=98.85  E-value=2.8e-09  Score=101.10  Aligned_cols=103  Identities=18%  Similarity=0.122  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 023909          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (275)
Q Consensus       142 rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l  221 (275)
                      .|+.+++++||+|||++++++++   .-.|++++......                 ............++..++..+|+
T Consensus        44 dL~a~Ai~~AL~dAGl~p~~Vd~---vI~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va~~lGl  103 (520)
T 4egv_A           44 ELATEAAKAALHDCGADADTVAR---AIDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVARNIGA  103 (520)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHH---HCCEEEECCC-------------------------------CCHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCcCHHHcce---EEEEEeeccccccc-----------------chhhhhhccccCHHHHHHHHcCC
Confidence            38889999999999999765432   12345443321100                 00001122334567789999999


Q ss_pred             CC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCC
Q 023909          222 TG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMII  264 (275)
Q Consensus       222 ~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~  264 (275)
                      .+ +.++++.+|+|++.+|++|+++|++|++|++|+||+|.+-+
T Consensus       104 ~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~  147 (520)
T 4egv_A          104 DPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTST  147 (520)
T ss_dssp             CCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccc
Confidence            76 67788999999999999999999999999999999999644

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=98.83  E-value=2.5e-08  Score=93.15  Aligned_cols=94  Identities=13%  Similarity=0.120  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ....|+.+|+.+||++||+++++++       .|++++.. ++                         .....+.+|+..
T Consensus       109 ~a~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t-~~-------------------------~~P~~a~~v~~~  155 (465)
T 3e1h_A          109 DGVPLAVEASRKAMAEARLVPAQIT-------HMVSTTCT-DS-------------------------ANPGYDHYVAKE  155 (465)
T ss_dssp             HTHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSS-CC-------------------------CSSCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeC-CC-------------------------CCCcHHHHHHHH
Confidence            3458999999999999999975533       46777653 11                         112357889999


Q ss_pred             hCCCC-c-cccc-chhhhHHHHHHHHHHHHHHc----CCCCEEEEeccCCCCChH
Q 023909          219 LGWTG-P-SYSI-STACASSNYSILNATSHIIK----GDTDIMLCGGSDGMIIPS  266 (275)
Q Consensus       219 ~~l~G-p-~~~v-~taCsS~l~Al~~A~~~I~~----G~~d~alvGgvd~~l~p~  266 (275)
                      ||++. + .+.| +.+|+++++||..|.++|+.    |.++.|||+|+|. ++..
T Consensus       156 LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~-~S~~  209 (465)
T 3e1h_A          156 LGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEV-STTM  209 (465)
T ss_dssp             HTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEC-CGGG
T ss_pred             hCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEee-cchh
Confidence            99986 3 5778 79999999999999999997    9999999999999 4543

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=98.78  E-value=1.9e-08  Score=90.98  Aligned_cols=93  Identities=16%  Similarity=0.014  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++.+||+++|+++++++       .|++|+....                  .+..     . .++.+++..+
T Consensus        54 ~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~~------------------~~d~-----~-~~a~~v~~~l  102 (357)
T 3s3l_A           54 PPRMAARAARAALGRGDVDPADVS-------LVLHSSLWFQ------------------GIDL-----W-PAASYVAHEA  102 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSCC------------------SSSS-----S-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------Cccc-----c-cHHHHHHHHh
Confidence            467999999999999999865432       3666664200                  0000     0 2478899999


Q ss_pred             CCC-CcccccchhhhHHHHHHHHHHHHHHcCCCC--EEEEeccCCCC
Q 023909          220 GWT-GPSYSISTACASSNYSILNATSHIIKGDTD--IMLCGGSDGMI  263 (275)
Q Consensus       220 ~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d--~alvGgvd~~l  263 (275)
                      |++ .|++.|+.+|+|+++||..|.++|++|.++  .+||+|+|.+.
T Consensus       103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s  149 (357)
T 3s3l_A          103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFA  149 (357)
T ss_dssp             TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCC
T ss_pred             CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccc
Confidence            996 489999999999999999999999999999  99999999853

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=98.74  E-value=3.3e-08  Score=91.13  Aligned_cols=91  Identities=20%  Similarity=0.164  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          139 KYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       139 ~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ....|+.+|+.+||+++|+++++++       .|++++..+.                         .. ...+.+++..
T Consensus       136 ~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~~-------------------------~~-P~~a~~v~~~  182 (413)
T 3v7i_A          136 AVQAYGERAARGALQIAGLDVADVD-------CLITSNSTTP-------------------------AL-PGLDVALANR  182 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSSC-------------------------CS-SCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCCC-------------------------Cc-CHHHHHHHHH
Confidence            4567999999999999999975543       5788775421                         11 2357889999


Q ss_pred             hCCCC--ccccc-chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTG--PSYSI-STACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~G--p~~~v-~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      +|++.  +.+.| +.+|+|+++||..|+++|++|.++.|||+|+|.+
T Consensus       183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~  229 (413)
T 3v7i_A          183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEAL  229 (413)
T ss_dssp             TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECG
T ss_pred             hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecc
Confidence            99987  35667 9999999999999999999999999999999984

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=98.72  E-value=4e-08  Score=87.74  Aligned_cols=85  Identities=20%  Similarity=0.132  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+|+.+||++||+++++++       .|++|+... +                           ...+..++..++
T Consensus        56 sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~-q---------------------------~~~A~~va~~Lg  100 (347)
T 3lma_A           56 RKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN-Q---------------------------NVTANYVARHLK  100 (347)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS-S---------------------------STTHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC-c---------------------------hhHHHHHHHHhC
Confidence            56899999999999999976543       477776431 0                           013555666664


Q ss_pred             CCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       221 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                        -|.+.|+++|+|+++||..|..+|++|.+|.|||+|+|.+
T Consensus       101 --ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~  140 (347)
T 3lma_A          101 --IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHN  140 (347)
T ss_dssp             --CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG
T ss_pred             --CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccc
Confidence              4899999999999999999999999999999999999974

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=98.65  E-value=9.4e-08  Score=85.99  Aligned_cols=89  Identities=28%  Similarity=0.394  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+.+|+++||+++|+++++++       .|++++..+++                         .....+..|...||
T Consensus        63 ~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~~~-------------------------~~P~~a~~v~~~LG  110 (350)
T 4ewp_A           63 PVMAVGAAREALERAGLQGSDLD-------AVIVSTVTFPH-------------------------ATPSAAALVAHEIG  110 (350)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCCSC-------------------------SSSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCCchHHHHHHHhC
Confidence            45999999999999999975533       36676654321                         11235778999999


Q ss_pred             CCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          221 WTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       221 l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      ++. +++-|+.+|+++++||..|..+|++|..+.+||.++|.
T Consensus       111 l~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~  152 (350)
T 4ewp_A          111 ATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVER  152 (350)
T ss_dssp             CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred             CCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeee
Confidence            964 77889999999999999999999999999999999997

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=98.51  E-value=3.8e-08  Score=90.28  Aligned_cols=135  Identities=14%  Similarity=0.105  Sum_probs=90.1

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|.|.|+|...|.- .+.+++.+.+  |.+. ..+.  ...+...+.  ..+         +.     .....|++.|+.
T Consensus         2 ~v~I~~ig~y~P~~~v~~~~l~~~~--~~~~-~~i~--~~~Gi~~r~--~~~---------~~-----e~~~~la~~Aa~   60 (396)
T 1xpm_A            2 AIGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFL--IGIGQTEMA--VSP---------VN-----QDIVSMGANAAK   60 (396)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHH--TTTCCSEEE--ECC---------TT-----CCHHHHHHHHHH
T ss_pred             ceEEEEEEEeCCCeEecHHHHHHHh--CCCH-HHHh--hhcCceEEE--eCC---------CC-----CCHHHHHHHHHH
Confidence            47899999999985 5666665543  2110 0000  000111111  010         00     124678999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEE-EEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCC--Cccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGV-IIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWT--GPSY  226 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv-~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~--Gp~~  226 (275)
                      +||++  ++        +++++. ++|+..+..                        .. ...+..|+..+|++  .|++
T Consensus        61 ~aL~~--~~--------~~~Id~li~~t~~~~~------------------------~~-p~~a~~v~~~lGl~~~~~~~  105 (396)
T 1xpm_A           61 DIITD--ED--------KKKIGMVIVATESAVD------------------------AA-KAAAVQIHNLLGIQPFARCF  105 (396)
T ss_dssp             TTCCH--HH--------HHHEEEEEEECSSCSB------------------------SS-SCHHHHHHHHTTCCSSCEEE
T ss_pred             HHHhc--CC--------HHHCCEEEEEeCCCCC------------------------CC-CCHHHHHHHHhCCCCCceEE
Confidence            99987  43        244554 556653211                        11 23678999999997  4999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      .|+++|+|++.||..|+++|++|.+|.|||+|+|.
T Consensus       106 ~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~  140 (396)
T 1xpm_A          106 EMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT  140 (396)
T ss_dssp             EEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred             EeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence            99999999999999999999999999999999996

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=98.44  E-value=1.1e-07  Score=87.04  Aligned_cols=138  Identities=17%  Similarity=0.127  Sum_probs=93.4

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      ..|.|.|+|...|.- .+.+++-+.+  |.+.    +++ ......+.-.    +     ..+.     .....|+.+|+
T Consensus         6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~----~~~-~~~~Gi~~r~----~-----~~~~-----e~~~~La~~Aa   64 (388)
T 3v4n_A            6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP----GKF-HIGIGQDQMA----V-----NPIS-----QDIVTFAANAA   64 (388)
T ss_dssp             CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT----HHH-HTTTCCCEEE----C-----CCTT-----CCHHHHHHHHH
T ss_pred             eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH----HHH-HHHhCceEEE----E-----CCCC-----CCHHHHHHHHH
Confidence            379999999999984 6777766553  2110    000 0000000000    0     0011     11356999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--ccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSY  226 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G--p~~  226 (275)
                      .+||+++|  +++++       .|++|+..+.+                        . ....+..|+..||+++  +++
T Consensus        65 ~~aL~~a~--~~~Id-------~li~~t~t~~~------------------------~-~ps~a~~v~~~LGl~~~~~~~  110 (388)
T 3v4n_A           65 EAILTKED--KEAID-------MVIVGTESSID------------------------E-SKAAAVVLHRLMGIQPFARSF  110 (388)
T ss_dssp             HTTCCHHH--HHHEE-------EEEEECSSCSB------------------------S-SSCHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHhCC--cccCC-------EEEEEeccCCC------------------------c-CccHHHHHHHHcCCCCCceEe
Confidence            99999987  33221       46777654321                        1 1245788999999976  888


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .+..+|++++.||..|..+|++|.++.|||+|+|..
T Consensus       111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~  146 (388)
T 3v4n_A          111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIA  146 (388)
T ss_dssp             EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEE
T ss_pred             ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhh
Confidence            999999999999999999999999999999999984

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=98.35  E-value=7.4e-07  Score=83.62  Aligned_cols=138  Identities=12%  Similarity=0.059  Sum_probs=90.1

Q ss_pred             cEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGK  149 (275)
Q Consensus        71 ~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~  149 (275)
                      .|.|.|+|..+|.- .+.+++.+..  |.+     +.|-........-+..         .+.     .....|+.+|+.
T Consensus        24 ~vgI~aig~y~P~~~v~~~el~~~~--g~~-----~~~~~~~~Gi~~r~~~---------~~~-----e~~~~La~~Aa~   82 (478)
T 2p8u_A           24 DVGIVALEIYFPSQYVDQAELEKYD--GVD-----AGKYTIGLGQAKMGFC---------TDR-----EDINSLCMTVVQ   82 (478)
T ss_dssp             CCEEEEEEEECCSEEEEHHHHHHHH--TCC-----TTCCCCCCCCCEEECC---------CTT-----CCHHHHHHHHHH
T ss_pred             ceEEEEEEEECCCeEecHHHHHHHh--CCC-----hhHhecccCceEEEeC---------CCC-----CCHHHHHHHHHH
Confidence            68999999999984 6777776654  211     0111111110000000         111     123679999999


Q ss_pred             HHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC---C-Ccc
Q 023909          150 KALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW---T-GPS  225 (275)
Q Consensus       150 ~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l---~-Gp~  225 (275)
                      +||+++|+++++++       .|++|+..+.+                         .....+..|...|+.   . -++
T Consensus        83 ~aL~~agi~~~dId-------~li~~T~t~~~-------------------------~~ps~a~~v~~~L~~lG~~~~~~  130 (478)
T 2p8u_A           83 NLMERNNLSYDCIG-------RLEVGTETIID-------------------------KSKSVKTNLMQLFEESGNTDIEG  130 (478)
T ss_dssp             HHHHHTTCCGGGEE-------EEEEECSCCSC-------------------------SSSCHHHHHGGGTTTTTCCCCBC
T ss_pred             HHHHHcCCCHHHCC-------EEEEEccCCcc-------------------------cCccHHHHHHHHHhhcCCCCceE
Confidence            99999999854322       35666653221                         012346667755544   3 367


Q ss_pred             cccchhhhHHHHHHHHHHHHHHcCC--CCEEEEeccCC
Q 023909          226 YSISTACASSNYSILNATSHIIKGD--TDIMLCGGSDG  261 (275)
Q Consensus       226 ~~v~taCsS~l~Al~~A~~~I~~G~--~d~alvGgvd~  261 (275)
                      +.|..||++++.||..|..+|++|.  .+.|||.|+|.
T Consensus       131 ~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei  168 (478)
T 2p8u_A          131 IDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI  168 (478)
T ss_dssp             CEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred             EEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence            8899999999999999999999999  99999999995

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=98.07  E-value=1.4e-05  Score=74.54  Aligned_cols=137  Identities=14%  Similarity=0.154  Sum_probs=87.2

Q ss_pred             CcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +.|-|.|+|..+|.- .+.+++-+..  |.         +...+..+.|  |.+   ..+.++.|     ...-|+..|+
T Consensus         4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~---------~~~~i~~~~G--i~~---r~~~~~~E-----~~~~ma~~Aa   62 (460)
T 2wya_A            4 KDVGILALEVYFPAQYVDQTDLEKYN--NV---------EAGKYTVGLG--QTR---MGFCSVQE-----DINSLCLTVV   62 (460)
T ss_dssp             SSCEEEEEEEECCSEEEEHHHHHHHT--TC---------CTTCCCCCCC--CCE---EECCCTTC-----CHHHHHHHHH
T ss_pred             CceEEEEEEEECCCeEEcHHHHHHHh--CC---------CHHHHHHhhC--cEE---EEECCCCC-----CHHHHHHHHH
Confidence            579999999999985 6777765442  21         1111111111  100   00011111     1355999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEE-EEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC----
Q 023909          149 KKALVDAGITEQVSGELDKSRCG-VIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG----  223 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~g-v~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G----  223 (275)
                      .+||+++|+++++        ++ |++|+..+.+.                         ....+..|...|++.|    
T Consensus        63 ~~al~~a~i~~~~--------Id~ii~aT~t~~~~-------------------------~ps~a~~v~~~l~~~g~~~~  109 (460)
T 2wya_A           63 QRLMERIQLPWDS--------VGRLEVGTETIIDK-------------------------SKAVKTVLMELFQDSGNTDI  109 (460)
T ss_dssp             HHHHHHHTCCGGG--------EEEEEEECSCCSCS-------------------------SSCHHHHHGGGTGGGTCCCC
T ss_pred             HHHHHHcCCCHHH--------CCEEEEEeCCCCCC-------------------------CCchHHHHHHHHhccCCCCe
Confidence            9999999998644        44 66777543211                         1234667888887655    


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHcCCCC--EEEEeccC
Q 023909          224 PSYSISTACASSNYSILNATSHIIKGDTD--IMLCGGSD  260 (275)
Q Consensus       224 p~~~v~taCsS~l~Al~~A~~~I~~G~~d--~alvGgvd  260 (275)
                      +++-++.||+++++||..|..+|++|..+  .+|+++.+
T Consensus       110 ~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~  148 (460)
T 2wya_A          110 EGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGD  148 (460)
T ss_dssp             BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEE
T ss_pred             eEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecc
Confidence            35678899999999999999999999765  45555444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	275
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	2e-42
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	5e-36
d1e5ma1	250	c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {	3e-30
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	3e-30
d1tqya1	216	c.95.1.1 (A:3-218) Actinorhodin polyketide putativ	1e-25
d2vbaa1	253	c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E	6e-24
d2ix4a1	270	c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II	2e-21
d1tqyb1	208	c.95.1.1 (B:2-209) Actinorhodin polyketide putativ	2e-20

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 5/201 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLGA+TP+G     FH + L G +G+  I  FD S  P RIAAE+     G ++
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDV-DPGAYL 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K  ++ D+++ YAL+A + AL DAG+  +   +LD  R G ++G+ +GG+        
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117

Query: 190 AI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
              +    ++SPF+IP  + NMASA +AM  G+TGPS ++ TACA+   ++ +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177

Query: 249 GDTDIMLCGGSDGMIIPSGTV 269
           G+ D++L GG++  I P    
Sbjct: 178 GEADLVLAGGTEAAITPMAIG 198

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  126 bits (318), Expect = 5e-36
 Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+VVTGLG ++P+G+       +LL G +GIS I  FD S + T+ A  +K  +    I
Sbjct: 2   RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
           S K  +K D ++ Y +VAG +A+ D+G+      E + +R G  IGS +GGL ++ +   
Sbjct: 62  SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 118

Query: 190 AIKVSY-KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
           ++     +K+SPF++P ++ NM +  L +  G  GPS SI+TA  S  ++I +A   I  
Sbjct: 119 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAY 178

Query: 249 GDTDIMLCGGSDGMIIPSGTV 269
           GD D+M+ GG++    P G  
Sbjct: 179 GDADVMVAGGAEKASTPLGVG 199

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score =  111 bits (279), Expect = 3e-30
 Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R+VVTGLGA+TP+G+    +   L+EG  GI  I  FD S+   R   E+K      ++
Sbjct: 2   KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 61

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K AK+ D++  +A+ A ++A+ DA +      EL+    GV+IG+ +GGL+VL D   
Sbjct: 62  DRKEAKRMDRFCHFAVCASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQT 118

Query: 190 AIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            +      + SPF IP  + NMAS + A++LG  GP+    TACA+ + +I +A   +  
Sbjct: 119 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 178

Query: 249 GDTDIMLCGGSDGMIIPSGTV 269
           G    M+CGG++  I P    
Sbjct: 179 GYAKAMICGGTEAAITPLSYA 199

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score =  111 bits (279), Expect = 3e-30
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 4/197 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
            R+VVTG G  +P+G+    F  SL  G  GI  I  FD S+F    AAEI+      + 
Sbjct: 9   NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYF 68

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K   + D Y +YAL A ++A+  A +  +    L++ R GVI+ S +GG++ + D   
Sbjct: 69  VKKDTNRFDNYSLYALYAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVL 125

Query: 190 AI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
            + +   K++ P  +P +L NMAS  +AM  G  G   SI+TAC+SSN +I +A   I  
Sbjct: 126 RLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 185

Query: 249 GDTDIMLCGGSDGMIIP 265
           G  D+ML GG++  I P
Sbjct: 186 GFQDVMLVGGTEASITP 202

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 4/204 (1%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           RR+V+TG+G   P G+    F   L  G T    I  FD S + +++AAE          
Sbjct: 1   RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG----GLRVLN 185
            P+   + D+   +A+   ++A   +G+                  +A         +L+
Sbjct: 61  GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLS 120

Query: 186 DGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
           D     +V    +S     Y + ++  A +A  +G  GP   +ST C S   S+ NA   
Sbjct: 121 DSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRA 180

Query: 246 IIKGDTDIMLCGGSDGMIIPSGTV 269
           I +G  D+M  G +D  I P    
Sbjct: 181 IEEGSADVMFAGAADTPITPIVVA 204

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score = 95.0 bits (235), Expect = 6e-24
 Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 5/198 (2%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
           +R V+TGLG V+ +G++      SL EG +GI+  Q    S   + +   +K   T G I
Sbjct: 2   KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKL-DTTGLI 60

Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
             K+ +      IYA ++ ++A+ DAG++ +     +  R G+I GS  G  R    G +
Sbjct: 61  DRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGAD 118

Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
           A++     K + P+ +  ++ +  SA LA      G +YSIS+ACA+S + I NA   I 
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178

Query: 248 KGDTDIMLCGGSDGMIIP 265
            G  DI+  GG + +   
Sbjct: 179 LGKQDIVFAGGGEELCWE 196

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score = 88.9 bits (219), Expect = 2e-21
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 18/217 (8%)

Query: 70  RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFD--------------CSEFPTR 115
           RR+VVTGLG VTPLG         L++G  GI  +   D                +  ++
Sbjct: 1   RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60

Query: 116 IAAEIKSLSTGGWISPK---IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGV 172
           +AA +   S  G         +K    ++ YA+ A  +AL DA        E +++   +
Sbjct: 61  VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 120

Query: 173 IIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTAC 232
             G       ++       +   +++SPF+IP  L NMAS  ++M  G+ GP+++  TAC
Sbjct: 121 GGGIGSIC-DIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTAC 179

Query: 233 ASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTV 269
           A+  +SI +AT  I  GD D+M+ GG++  I      
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVA 216

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 84.8 bits (208), Expect = 2e-20
 Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 3/198 (1%)

Query: 72  IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISP 131
           +++TG+G V P G     + +++L+G  G+  +  FD S +P  +A +I        I  
Sbjct: 2   VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 61

Query: 132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI 191
           ++  + D     AL A   AL DA    +     D     V   +  G      +  +  
Sbjct: 62  RLLPQTDPSTRLALTAADWALQDAKADPESLT--DYDMGVVTANACGGFDFTHREFRKLW 119

Query: 192 KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDT 251
               K +S +        + +  +++  G  GPS ++    A    ++ +A    I+  T
Sbjct: 120 SEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHA-RRTIRRGT 178

Query: 252 DIMLCGGSDGMIIPSGTV 269
            +++ GG D  + P G V
Sbjct: 179 PLVVSGGVDSALDPWGWV 196

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	275
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	100.0
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	100.0
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.33
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.31
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.31
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.24
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	98.7
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	98.67
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	98.67
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	98.55
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	98.5
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	98.47
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	98.25
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	97.55

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=4.7e-45  Score=306.65  Aligned_cols=200  Identities=24%  Similarity=0.394  Sum_probs=189.7

Q ss_pred             cEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHH
Q 023909           71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (275)
Q Consensus        71 ~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~  150 (275)
                      .|||||||+++|+|.|+++||++|++|+++++++++|+...++.++++++++|++..++++++.+.|||++++++.++.|
T Consensus         1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   80 (208)
T d1tqyb1           1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADW   80 (208)
T ss_dssp             CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHH
T ss_pred             CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhccccccccccccccc
Confidence            48999999999999999999999999999999999999999999999999999887778999999999999999999999


Q ss_pred             HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccccc
Q 023909          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSIS  229 (275)
Q Consensus       151 Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~v~  229 (275)
                      ||+|||++++   +..+.++|+++|++.++.+..++.+..+ ....+...++.+...++++++++|++.||++||+++|+
T Consensus        81 Al~~Ag~~~~---~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~  157 (208)
T d1tqyb1          81 ALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALV  157 (208)
T ss_dssp             HHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEE
T ss_pred             cchhhhcccc---cccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeecc
Confidence            9999999864   4667899999999999999998888888 77778899999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          230 TACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       230 taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +||+||++||++|+++|++| ||+|||||+|..++|..+.+|++|
T Consensus       158 tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~  201 (208)
T d1tqyb1         158 AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIAS  201 (208)
T ss_dssp             CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTT
T ss_pred             ccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHc
Confidence            99999999999999999999 999999999999999999999986

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.5e-44  Score=308.48  Aligned_cols=203  Identities=36%  Similarity=0.600  Sum_probs=192.0

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      .++|||||||+++|+|.++++||++|.+|+++|+++++|+...++.+++++|++|+....+++++.+++||++++++.++
T Consensus         1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa   80 (250)
T d2gfva1           1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG   80 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+|||+.+   ++.+..++||++|++.++....+..+..+ ......+++..++..+++.++++|++.||++||+++
T Consensus        81 ~~Al~dAg~~~---~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t  157 (250)
T d2gfva1          81 VQAMQDSGLEI---TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS  157 (250)
T ss_dssp             HHHHHHHTCCC---CTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred             HHHHHhcCCCc---cccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence            99999999985   34678899999999999998888887777 777888999999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |++||+||+.||++|+++|++|+||+|||||+|..++|..+.+|+++
T Consensus       158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~  204 (250)
T d2gfva1         158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAA  204 (250)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999875

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-43  Score=305.32  Aligned_cols=202  Identities=39%  Similarity=0.694  Sum_probs=187.8

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |++|||||||+++|.|.++++||++|.+|+++|+++++|+...++..+++.+ ++++..++++++.+.+||++++++.++
T Consensus         1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~aa   79 (249)
T d1j3na1           1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA   79 (249)
T ss_dssp             CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCccccccc-cccccccccHHHHhhCCHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999998888876 455556689999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||+|||++++   ++.+.|||||+|++.++.......+... ..+...++++.+...+.+.++++|++.||++||+++
T Consensus        80 ~~Al~dAGl~~~---~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t  156 (249)
T d1j3na1          80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST  156 (249)
T ss_dssp             HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred             HHHHHHcCCChh---HcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence            999999999964   4667899999999999998888877766 778888999999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |++||+||++||++|+++|++|+||+|||||+|..++|..+.+|.++
T Consensus       157 v~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~  203 (249)
T d1j3na1         157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVM  203 (249)
T ss_dssp             BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999875

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.6e-42  Score=292.55  Aligned_cols=201  Identities=27%  Similarity=0.419  Sum_probs=180.7

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCC-CCCHHHHhhCCHHHHHHHHHH
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG-WISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~-~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      +||||||||+++|+|.++++||++|++|+++|+++++|+...+...+++.++ ||... .+++++.+.+++.++|++.++
T Consensus         1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~aa   79 (216)
T d1tqya1           1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEAD-FDPVAEGFGPRELDRMDRASQFAVACA   79 (216)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCC-CCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred             CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCccccccccccc-ccccccccChhhhcccCcchhhHHHHH
Confidence            5899999999999999999999999999999999999998888777766654 45443 499999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-Hhc------cCCCCCcccccccchHHHHHHHHHhCC
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVS------YKKMSPFYIPYSLTNMASAVLAMDLGW  221 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~a~~ia~~~~l  221 (275)
                      +|||+|||++++   ++.+.++|+++|++.++....++.+..+ ..+      .....++.++..+++.++++|++.||+
T Consensus        80 ~~Al~dAg~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~  156 (216)
T d1tqya1          80 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA  156 (216)
T ss_dssp             HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHhcCCcc---ccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCc
Confidence            999999999864   4677999999999999999988888877 332      234566777788889999999999999


Q ss_pred             CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          222 TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       222 ~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +||+++|++||+||++||++|+++|++|+||+|||||+|..++|.++.+|++|
T Consensus       157 ~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~  209 (216)
T d1tqya1         157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAI  209 (216)
T ss_dssp             CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHC
Confidence            99999999999999999999999999999999999999999999999999986

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=5.9e-42  Score=295.05  Aligned_cols=203  Identities=36%  Similarity=0.629  Sum_probs=191.2

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      .+||||||||+++|+|.++++||++|.+|+++|+++++|+...++..+.|.++++++.+.+++++.+.+||++++++.++
T Consensus         1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~   80 (250)
T d1e5ma1           1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS   80 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred             CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999877777799999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHHHHHHHHHhCCCCcccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYS  227 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~~  227 (275)
                      ++||++||+.++   .+...+++|++|++.+....+...+..+ .++....++..+...+.+.+++++++.||++||+++
T Consensus        81 ~~Al~~Agl~~~---~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t  157 (250)
T d1e5ma1          81 QQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC  157 (250)
T ss_dssp             HHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred             HHHHHHcCCChH---hhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence            999999999853   4678999999999999998888888777 777888899999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          228 ISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       228 v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      |++||+||+.||++|+++|++|+||++||||+|..++|..+.+|+++
T Consensus       158 v~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~  204 (250)
T d1e5ma1         158 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASA  204 (250)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999875

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-37  Score=265.25  Aligned_cols=202  Identities=30%  Similarity=0.441  Sum_probs=177.4

Q ss_pred             CCcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHH
Q 023909           69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAG  148 (275)
Q Consensus        69 ~~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa  148 (275)
                      |+||||||||+++|+|.++++||++|++|+++|+++++|+...++....+.++. +...++...+.+.+++..++.+.++
T Consensus         1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (253)
T d2vbaa1           1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKL-DTTGLIDRKVVRFMSDASIYAFLSM   79 (253)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCC-CCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred             CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCcccccccccc-cccccccchhhccchhhhhhhhHHH
Confidence            679999999999999999999999999999999999888888888888877754 4445578899999999999999999


Q ss_pred             HHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH--HhccCCCCCcccccccchHHHHHHHHHhCCCCccc
Q 023909          149 KKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI--KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY  226 (275)
Q Consensus       149 ~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~Gp~~  226 (275)
                      .+|++++|+..+.  ..+..|+||++|+..++.......+..+  .++...++|+.++....+.++++|++.||++||++
T Consensus        80 ~~a~~~~~l~~~~--~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~  157 (253)
T d2vbaa1          80 EQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY  157 (253)
T ss_dssp             HHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred             HHHHHHhhccchh--ccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence            9999999997543  2357899999999999888766665555  45566778899999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       227 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +|++||+||++||++|+++|++|+||+|||||+|. +.+..+.+|.++
T Consensus       158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~-~~~~~~~~~~~~  204 (253)
T d2vbaa1         158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAM  204 (253)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             eeeccchhHHHHHHHHHHhcchhccceeeecchhh-hhcchhhhHHHH
Confidence            99999999999999999999999999999999998 555567788764

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=100.00  E-value=4.1e-34  Score=247.57  Aligned_cols=203  Identities=34%  Similarity=0.529  Sum_probs=165.8

Q ss_pred             CcEEEEeccccCCCCCCHHHHHHHHHcCCCceeeCCC--CCCCCC------------CcceeeecCCCCCCCCCCHHH--
Q 023909           70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQG--FDCSEF------------PTRIAAEIKSLSTGGWISPKI--  133 (275)
Q Consensus        70 ~~VaItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~~~------------~~~~~g~i~~fd~~~~i~~~~--  133 (275)
                      +||||||||+++|+|.++++||++|++|+++|++++.  |+...+            +.+++++++.+.....+..+.  
T Consensus         1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (270)
T d2ix4a1           1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL   80 (270)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred             CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence            5899999999999999999999999999999999854  443333            456677776643322233333  


Q ss_pred             -HhhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHH-HhccCCCCCcccccccchHH
Q 023909          134 -AKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMA  211 (275)
Q Consensus       134 -~~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  211 (275)
                       ...+++....++.+..+|++++++...  +.....++++.++................ .......+++.+++.+.+.+
T Consensus        81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (270)
T d2ix4a1          81 NSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA  158 (270)
T ss_dssp             CSTTCCHHHHHHHHHHHHHHHHTTCCCC--SHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHhhhccc--cccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence             345778888889999999999997642  22334567787777776666555555444 66778889999999999999


Q ss_pred             HHHHHHHhCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCCChHHHHHHHhc
Q 023909          212 SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIPSGTVNKAVA  274 (275)
Q Consensus       212 a~~ia~~~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l~p~~~~gf~~l  274 (275)
                      +++|++.||++||+++|++||+||+.||++|+++|++|+||+|||||+|..++|..+.+|+++
T Consensus       159 a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~  221 (270)
T d2ix4a1         159 SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRS  221 (270)
T ss_dssp             HHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999999999875

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.33  E-value=2e-12  Score=110.69  Aligned_cols=91  Identities=19%  Similarity=0.268  Sum_probs=75.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhC
Q 023909          141 LIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLG  220 (275)
Q Consensus       141 ~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~  220 (275)
                      ..|+..++.++|+++|++++.++       .|++|+....                         .....++..++...|
T Consensus        28 ~dL~~~~~~~~l~~~~i~~~~Id-------~vi~G~~~~~-------------------------~~~~n~ar~~al~ag   75 (268)
T d1m3ka1          28 HELGATVISAVLERAGVAAGEVN-------EVILGQVLPA-------------------------GEGQNPARQAAMKAG   75 (268)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCc-------EEEEeecccc-------------------------CcchHHHhHHHHHhC
Confidence            34888999999999999987654       4899985421                         112356778888888


Q ss_pred             CC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCCC
Q 023909          221 WT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI  263 (275)
Q Consensus       221 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~l  263 (275)
                      +.  =|+++|+..|+||+.||++|+++|+.|++|++||||+|.+-
T Consensus        76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS  120 (268)
T d1m3ka1          76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS  120 (268)
T ss_dssp             CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEST
T ss_pred             CcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccc
Confidence            84  47899999999999999999999999999999999999843

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.31  E-value=2.5e-12  Score=109.59  Aligned_cols=91  Identities=19%  Similarity=0.214  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHH-HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          141 LIYALVAGKKALV-DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       141 ~rl~l~aa~~Al~-dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ..|+..++.++|+ ++|++++.++       .|++|+.....                        .....++..++...
T Consensus        31 ~dL~~~~i~~~l~r~agi~~~~Id-------~vi~G~v~~~~------------------------~~g~n~aR~~al~a   79 (262)
T d1wdkc1          31 EDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTL------------------------EQGWNIARMASLMT   79 (262)
T ss_dssp             HHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSB------------------------TTTTTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhcCCCCHHHee-------EEEEEeecccc------------------------cccccchhhhHhhh
Confidence            3478889999999 5999976654       48898764211                        11223566666665


Q ss_pred             CCC--CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWT--GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      |+-  =|+++|+.+|+||+.||++|++.|+.|+.|++|+||+|.+
T Consensus        80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsm  124 (262)
T d1wdkc1          80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM  124 (262)
T ss_dssp             SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEET
T ss_pred             hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccc
Confidence            653  4899999999999999999999999999999999999974

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.31  E-value=3.8e-12  Score=109.26  Aligned_cols=90  Identities=14%  Similarity=0.171  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCC
Q 023909          142 IYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGW  221 (275)
Q Consensus       142 rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l  221 (275)
                      .|+..++.++|+++|++++.++       .|++|+....                        +.....++..++...|+
T Consensus        26 dL~~~a~~~al~~~~i~~~~Id-------~vi~G~v~~~------------------------g~~~~n~aR~~al~aGl   74 (273)
T d1ulqa1          26 DLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQA------------------------GEDNRNVARMALLLAGF   74 (273)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCS------------------------STTTTTHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcCC
Confidence            3788899999999999977654       5899976421                        11123467777787787


Q ss_pred             --CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          222 --TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       222 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                        .-|+++|+.+|+||+.||++|++.|+.|+.|++|+||+|.+
T Consensus        75 p~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~Esm  117 (273)
T d1ulqa1          75 PVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESM  117 (273)
T ss_dssp             CTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEES
T ss_pred             CCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeecccc
Confidence              34899999999999999999999999999999999999974

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.24  E-value=1.8e-11  Score=104.58  Aligned_cols=89  Identities=15%  Similarity=0.160  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHH----HcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHH
Q 023909          142 IYALVAGKKALV----DAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAM  217 (275)
Q Consensus       142 rl~l~aa~~Al~----dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  217 (275)
                      .|+..++.++|+    ++|++++.++       .|++|+...                         ......++..++.
T Consensus        37 ~L~~~~i~~~l~r~~~~~~idp~~Id-------~vi~G~v~~-------------------------~g~~~~~aR~~al   84 (269)
T d1afwa1          37 YLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLN-------------------------VGAGATEHRAACL   84 (269)
T ss_dssp             HHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSS-------------------------BGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCccccCChhhcC-------EEEeccccc-------------------------cccccccchhhhh
Confidence            366677788886    4578876544       388997532                         1122356677777


Q ss_pred             HhCC--CCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          218 DLGW--TGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       218 ~~~l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      .-|+  .-|+++|+.+|+||+.||+.|++.|+.|+.|++|+||+|.+
T Consensus        85 ~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~Esm  131 (269)
T d1afwa1          85 ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESM  131 (269)
T ss_dssp             HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred             hccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccc
Confidence            7776  57999999999999999999999999999999999999974

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.70  E-value=4.3e-08  Score=86.88  Aligned_cols=160  Identities=15%  Similarity=0.124  Sum_probs=97.2

Q ss_pred             CCCcEEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCC----CCCCCCCcceeeecCCCCCCC----CCCH----HHH
Q 023909           68 KERRIVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQG----FDCSEFPTRIAAEIKSLSTGG----WISP----KIA  134 (275)
Q Consensus        68 ~~~~VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~----~~~~~~~~~~~g~i~~fd~~~----~i~~----~~~  134 (275)
                      .....+|+|+|.-.|.- .+-+++++.+..-...-....+    +...+...++.. ++..|...    ..++    +..
T Consensus         8 p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~-~~~~~~~~~~~~~~~~~~~~r~~   86 (372)
T d1teda_           8 PTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMA-VDPLDAKFDVFRREPATIRDRMH   86 (372)
T ss_dssp             CCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECS-SCTTSTTHHHHTTCSSCHHHHHH
T ss_pred             CCceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCccccee-ccccccchhhhhhcCCCHHHHHH
Confidence            44466799999999985 6788888887542110000000    011122222210 11111100    0111    111


Q ss_pred             hhCCHHHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHH
Q 023909          135 KKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAV  214 (275)
Q Consensus       135 ~~~d~~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (275)
                      ........|+.+|+.+||++||+++++        +.+++-.+..++                         .....+..
T Consensus        87 ~~~e~~~~la~~Aa~~aL~~ag~~~~d--------Id~lI~~t~t~~-------------------------~~P~~a~~  133 (372)
T d1teda_          87 LFYEHAVPLAVDVSKRALAGLPYRAAE--------IGLLVLATSTGF-------------------------IAPGVDVA  133 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCGGG--------EEEEEEEESSCC-------------------------CSSCHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCHHH--------CCEEEEeccCCC-------------------------CCchHHHH
Confidence            112234579999999999999998654        444443332221                         11245788


Q ss_pred             HHHHhCCCCcc--cccc-hhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          215 LAMDLGWTGPS--YSIS-TACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       215 ia~~~~l~Gp~--~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |+..||++...  +.++ .||++++.||..|..+|++|..+.+||.++|.
T Consensus       134 v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~  183 (372)
T d1teda_         134 IVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIEL  183 (372)
T ss_dssp             HHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             HHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehh
Confidence            99999998654  3343 58999999999999999999999999999986

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=98.67  E-value=3.3e-08  Score=78.34  Aligned_cols=90  Identities=16%  Similarity=0.190  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEE-eecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHH
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVII-GSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMD  218 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  218 (275)
                      ...|+.+++.+||+++|+++++        +.+++ ++..++                         ......+..|...
T Consensus        49 ~~~ma~~Aa~~aL~~agi~~~d--------Idlli~~s~t~~-------------------------~~~p~~a~~v~~~   95 (172)
T d1ub7a1          49 TSDLAFKAVEDLLRRHPGALEG--------VDAVIVATNTPD-------------------------ALFPDTAALVQAR   95 (172)
T ss_dssp             HHHHHHHHHHHHHHHSTTTTTT--------EEEEEEECSSCS-------------------------EEESCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCccccc--------ceEEEEeccccc-------------------------ccccchHHHHHHH
Confidence            4568899999999999998644        44444 433221                         2233457788889


Q ss_pred             hCCCCcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          219 LGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       219 ~~l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ||.+.+++-|+.+|++.+++|++|..+|++|..+.+|+.++|..
T Consensus        96 Lg~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~  139 (172)
T d1ub7a1          96 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL  139 (172)
T ss_dssp             TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG
T ss_pred             hccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccc
Confidence            99999999999999999999999999999999999999999973

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=5.6e-08  Score=77.15  Aligned_cols=90  Identities=23%  Similarity=0.348  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++.+||+++|+++++++       -|++++..+++                         .....+..|...|
T Consensus        51 ~~~la~~Aa~~al~~a~~~~~~Id-------~li~~s~~~~~-------------------------~~P~~a~~v~~~L   98 (174)
T d1hnja1          51 VSTMGFEAATRAIEMAGIEKDQIG-------LIVVATTSATH-------------------------AFPSAACQIQSML   98 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSC-------------------------SSSCHHHHHHHHH
T ss_pred             chHHHHHHHHHhhhhccccccccc-------EEEEecCCccc-------------------------cccchhhhhhhcc
Confidence            356899999999999999975532       35666653221                         1234578899999


Q ss_pred             CCCC-cccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          220 GWTG-PSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       220 ~l~G-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      |++. +++-|+.+|+++++||+.|..+|++|.++.+|+.++|.
T Consensus        99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~  141 (174)
T d1hnja1          99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDV  141 (174)
T ss_dssp             TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeeh
Confidence            9975 78889999999999999999999999999999999996

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=98.50  E-value=1.8e-07  Score=74.56  Aligned_cols=90  Identities=20%  Similarity=0.272  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+.+++.+||+++|+++++++       .|++++..+.+                         .....+..+...+
T Consensus        58 ~~~ma~~Aa~~aL~~a~~~~~dId-------~li~~s~~~~~-------------------------~~p~~a~~v~~~l  105 (181)
T d1mzja1          58 IQVMGVAASRRALEHAGVDPAEID-------LVVVSTMTNFV-------------------------HTPPLSVAIAHEL  105 (181)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------CSSCHHHHHHHHH
T ss_pred             HHHHhHHHHHhhhhhccCChhHCe-------EEEEeccCCcc-------------------------ccccHHHHHHHhh
Confidence            456999999999999999975532       35565543221                         1233467788888


Q ss_pred             CCC-CcccccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          220 GWT-GPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       220 ~l~-Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +.+ ..++-|+.+|+++++||+.|..+|++|..+.+||.++|.
T Consensus       106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~  148 (181)
T d1mzja1         106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER  148 (181)
T ss_dssp             TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE
T ss_pred             cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeecc
Confidence            884 578899999999999999999999999999999999986

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.47  E-value=3.8e-07  Score=73.80  Aligned_cols=89  Identities=18%  Similarity=0.126  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+..|+.+||+++|+++++++       .|+++++. ++                        ..+ ..+..+...+
T Consensus        75 a~~la~~Aa~~aL~~ag~~~~dId-------~lI~~s~t-~~------------------------~~P-~~aa~v~~~l  121 (200)
T d1u0ma1          75 AKSRVPAVIQRALDDAELLATDID-------VIIYVSCT-GF------------------------MMP-SLTAWLINEM  121 (200)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCS-------EEEEECSS-SC------------------------CSS-CHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCChhhhh-------eEEEeccC-CC------------------------Ccc-hhHHHHHHHH
Confidence            456999999999999999975532       24444432 11                        122 3577889999


Q ss_pred             CCCCc--cccc-chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          220 GWTGP--SYSI-STACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       220 ~l~Gp--~~~v-~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +++..  .+.+ ..+|++++++|+.|..+|+.|..+.|||.++|.
T Consensus       122 g~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~  166 (200)
T d1u0ma1         122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEF  166 (200)
T ss_dssp             TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             hcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            98774  4444 579999999999999999999999999999986

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=98.25  E-value=2.4e-06  Score=70.70  Aligned_cols=90  Identities=16%  Similarity=0.080  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHh
Q 023909          140 YLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDL  219 (275)
Q Consensus       140 ~~rl~l~aa~~Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~  219 (275)
                      ...|+..|+.+||++||+++++++       .|+++++.+.                         ..+.. ...+...+
T Consensus       102 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t~~-------------------------~~p~~-~a~~~~~l  148 (235)
T d1bi5a1         102 VPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSGV-------------------------DMPGA-DYQLTKLL  148 (235)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSCC-------------------------CSSCH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCChhHCc-------EEEEecccCC-------------------------ccCcc-HHHHHHHH
Confidence            456999999999999999965432       3555554321                         11222 44566666


Q ss_pred             CCCCcc--c-ccchhhhHHHHHHHHHHHHHHcCCCCEEEEeccCCC
Q 023909          220 GWTGPS--Y-SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGM  262 (275)
Q Consensus       220 ~l~Gp~--~-~v~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~~  262 (275)
                      ++....  + .++.+|++++++|..|.++|+.|..+.|||.++|.+
T Consensus       149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~  194 (235)
T d1bi5a1         149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT  194 (235)
T ss_dssp             TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECG
T ss_pred             hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeec
Confidence            665543  3 346799999999999999999999999999999973

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.55  E-value=2.3e-05  Score=60.91  Aligned_cols=135  Identities=15%  Similarity=0.132  Sum_probs=86.2

Q ss_pred             EEEEeccccCCCC-CCHHHHHHHHHcCCCceeeCCCCCCCCCCcceeeecCCCCCCCCCCHHHHhhCCHHHHHHHHHHHH
Q 023909           72 IVVTGLGAVTPLG-DDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKK  150 (275)
Q Consensus        72 VaItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~i~~fd~~~~i~~~~~~~~d~~~rl~l~aa~~  150 (275)
                      |-|.|+|..+|.- .+.+++-+..  |.+. ..+.  +.-+...+.   +        ..+.|    + ...|++.++.+
T Consensus         2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~~-~~i~--~~~Gi~~r~---~--------~~~~E----~-~~~ma~~Aa~~   60 (166)
T d1xpma1           2 IGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFL--IGIGQTEMA---V--------SPVNQ----D-IVSMGANAAKD   60 (166)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHH--TTTCCSEEE---E--------CCTTC----C-HHHHHHHHHHT
T ss_pred             eeEeEEEEECCCeEEcHHHHHHHh--CCCH-HHHH--HhcCcEEEE---e--------CCCcc----C-HHHHHHHHHHh
Confidence            7799999999996 6777765543  3210 0000  000111111   0        11111    1 23478888888


Q ss_pred             HHHHcCCCCcccCCCCCCeEEEEEeecCCChhhHHHHHHHHHhccCCCCCcccccccchHHHHHHHHHhCCCC--ccccc
Q 023909          151 ALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTG--PSYSI  228 (275)
Q Consensus       151 Al~dAG~~~~~~~~~~~~~~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~~l~G--p~~~v  228 (275)
                      +|++.+          .+++++++-.+...                        .......+..+...+++..  .++-+
T Consensus        61 al~~~~----------~~~id~li~~t~~~------------------------~~~~p~~a~~v~~~lg~~~~~~~~dv  106 (166)
T d1xpma1          61 IITDED----------KKKIGMVIVATESA------------------------VDAAKAAAVQIHNLLGIQPFARCFEM  106 (166)
T ss_dssp             TCCHHH----------HHHEEEEEEECSSC------------------------SBSSSCHHHHHHHHTTCCSSCEEEEE
T ss_pred             hhcccc----------CCCCCeEEEecccc------------------------ccccchhHHHHHHhhccccceEEeee
Confidence            876543          23455555443211                        1223356778889999865  56889


Q ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEeccCC
Q 023909          229 STACASSNYSILNATSHIIKGDTDIMLCGGSDG  261 (275)
Q Consensus       229 ~taCsS~l~Al~~A~~~I~~G~~d~alvGgvd~  261 (275)
                      +.+|+++++||+.|..+|++|..+.+||.++|.
T Consensus       107 ~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~  139 (166)
T d1xpma1         107 KEACYAATPAIQLAKDYLATRPNEKVLVIATDT  139 (166)
T ss_dssp             ESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred             cccHHHHHHHHHHHhhHHhcCCCCeEEEEEEce
Confidence            999999999999999999999999999999885