Citrus Sinensis ID: 023970


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
MKKPENHGVPYSLTEEFTSVYRMHALLPDTLNLRDIDAQPGPNKSPPSAEKVPMENLVGHKGEKALSAIGFEKRIVSMGHQACGALELWNYPLWLRDLIPQNTDGTDRPDHVDLAALEVYRDRERKAARYNEFRRALLLIPISKWEDLTEDKEAIEVLNEVYGDDVEELDLQVGLMAEKKIKGFAISETAFVIFLLMASRRLEADRFFTSSFNEETYTKKGLEWVNTTESLKDVLHRHYPEITEKWMNSTSAFSVWDSPPNSHNPIPLYLRVPQ
cccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHccccccHHHHHccHHHHHHHHHccccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHccccccHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccccccccccccccc
*****NHGVPYSLTEEFTSVYRMHALLPDTLNLRDIDAQPGPNKSPPSAEKVPMENLVGHKGEKALSAIGFEKRIVSMGHQACGALELWNYPLWLRDLIPQNTDGTDRPDHVDLAALEVYRDRERKAARYNEFRRALLLIPISKWEDLTEDKEAIEVLNEVYGDDVEELDLQVGLMAEKKIKGFAISETAFVIFLLMASRRLEADRFFTSSFNEETYTKKGLEWVNTTESLKDVLHRHYPEITEKWMNSTSAFSVWDSPPNSHNPIPLYLRV**
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MKKPENHGVPYSLTEEFTSVYRMHALLPDTLNLRDIDAQPGPNKSPPSAEKVPMENLVGHKGEKALSAIGFEKRIVSMGHQACGALELWNYPLWLRDLIPQNTDGTDRPDHVDLAALEVYRDRERKAARYNEFRRALLLIPISKWEDLTEDKEAIEVLNEVYGDDVEELDLQVGLMAEKKIKGFAISETAFVIFLLMASRRLEADRFFTSSFNEETYTKKGLEWVNTTESLKDVLHRHYPEITEKWMNSTSAFSVWDSPPNSHNPIPLYLRVPQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alpha-dioxygenase 1 Alpha-dioxygenase that catalyzes the primary oxygenation of fatty acids into oxylipins. Mediates a protection against oxidative stress and cell death, probably by generating some lipid-derived molecules. Promotes local and systemic plant defense in a salicylic acid (SA)-dependent manner, including the establishment of systemic acquired resistance (SAR) in response to incompatible interaction. Involved in a negative regulation of abscisic acid (ABA)-mediated signaling pathway.probableQ9SGH6

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NT1, chain A
Confidence level:very confident
Coverage over the Query: 8-35,50-92,109-256
View the alignment between query and template
View the model in PyMOL
Template: 4HHR, chain A
Confidence level:very confident
Coverage over the Query: 1-273
View the alignment between query and template
View the model in PyMOL